Metagenome / Metatranscriptome Family F070503

Overview

Basic Information

• Family ID: F070503
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 123
• Average Sequence Length: 40 residues
• Representative Sequence: NIALPTRSGRQIAEFSPAGLNLDRVKQACDLTPKKPSKD
• Number of Associated Samples: 108
• Number of Associated Scaffolds: 123

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 0.81 %
• % of genes near scaffold ends (potentially truncated): 99.19 %
• % of genes from short scaffolds (< 2000 bps): 92.68 %
• Associated GOLD sequencing projects: 101
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (65.854 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (9.756 % of family members)
• Environment Ontology (ENVO): Unclassified (18.699 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (45.528 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 14.93%
  β-sheet: 11.94%
  Coil/Unstructured: 73.13%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF04011	LemA	16.26
PF13439	Glyco_transf_4	11.38
PF00490	ALAD	10.57
PF13620	CarboxypepD_reg	2.44
PF13505	OMP_b-brl	2.44
PF03795	YCII	1.63
PF01850	PIN	1.63
PF00685	Sulfotransfer_1	1.63
PF01370	Epimerase	0.81
PF14845	Glycohydro_20b2	0.81
PF01433	Peptidase_M1	0.81
PF00202	Aminotran_3	0.81
PF02687	FtsX	0.81
PF13469	Sulfotransfer_3	0.81
PF13229	Beta_helix	0.81
PF06580	His_kinase	0.81
PF04389	Peptidase_M28	0.81
PF12811	BaxI_1	0.81
PF01938	TRAM	0.81
PF00892	EamA	0.81
PF14196	ATC_hydrolase	0.81
PF11412	DsbC	0.81
PF08281	Sigma70_r4_2	0.81
PF13564	DoxX_2	0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG1704	Magnetosome formation protein MamQ, lipoprotein antigen LemA family	Cell wall/membrane/envelope biogenesis [M]	16.26
COG0113	Delta-aminolevulinic acid dehydratase, porphobilinogen synthase	Coenzyme transport and metabolism [H]	10.57
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.63
COG0308	Aminopeptidase N, contains DUF3458 domain	Amino acid transport and metabolism [E]	0.81
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	0.81
COG3275	Sensor histidine kinase, LytS/YehU family	Signal transduction mechanisms [T]	0.81

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.85 %
Unclassified	root	N/A	34.15 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.85 %
Unclassified	root	N/A	34.15 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.85 %
Unclassified	root	N/A	34.15 %

Level 4

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	39.84 %
Unclassified	root	N/A	34.15 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	3.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.63 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.81 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.81 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.15 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	14.63 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	13.82 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	3.25 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.63 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.81 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.81 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.63 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	13.01 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	3.25 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.63 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.81 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.81 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.81 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.63 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12.20 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	3.25 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1.63 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.81 %
unclassified Anaerolineae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae	0.81 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.81 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.81 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.63 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	4.88 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	3.25 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1.63 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.81 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.81 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.81 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.81 %
Alloacidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium	0.81 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.81 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.81 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.81 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.63 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.25 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	3.25 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1.63 %
unclassified Candidatus Sulfotelmatobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter	0.81 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.81 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	0.81 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.81 %
Granulicella arctica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	0.81 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.81 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.81 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.81 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.63 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	3.25 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.25 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1.63 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.81 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	0.81 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	0.81 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.81 %
Granulicella arctica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	0.81 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.81 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.81 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.81 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300001356|JGI12269J14319_10325505	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	547
3300002245|JGIcombinedJ26739_101883814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500
3300004091|Ga0062387_101301256	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	574
3300004092|Ga0062389_102007941	Not Available	755
3300004635|Ga0062388_101833950	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	623
3300005176|Ga0066679_10310197	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1027
3300005467|Ga0070706_100525168	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1101
3300005533|Ga0070734_10415250	All Organisms → cellular organisms → Bacteria	767
3300005555|Ga0066692_10701129	All Organisms → cellular organisms → Bacteria	628
3300005921|Ga0070766_10715234	All Organisms → cellular organisms → Bacteria	679
3300006059|Ga0075017_101219154	All Organisms → cellular organisms → Bacteria	589
3300006102|Ga0075015_100531493	All Organisms → cellular organisms → Bacteria	681
3300006102|Ga0075015_100597546	Not Available	646
3300006102|Ga0075015_100634518	Not Available	628
3300006162|Ga0075030_101430477	Not Available	541
3300006173|Ga0070716_100087620	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1876
3300006174|Ga0075014_100412322	All Organisms → cellular organisms → Bacteria → Acidobacteria	739
3300006358|Ga0068871_100429340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1181
3300006794|Ga0066658_10772014	All Organisms → cellular organisms → Bacteria → Acidobacteria	538
3300009029|Ga0066793_10415104	Not Available	772
3300009038|Ga0099829_11751874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509
3300009520|Ga0116214_1350533	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571
3300009628|Ga0116125_1169302	Not Available	611
3300009643|Ga0116110_1197305	All Organisms → cellular organisms → Bacteria → Acidobacteria	654
3300009643|Ga0116110_1272344	Not Available	540
3300009762|Ga0116130_1306830	Not Available	508
3300010046|Ga0126384_11339825	Not Available	665
3300010046|Ga0126384_11634700	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	607
3300010343|Ga0074044_10013285	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	6144
3300010343|Ga0074044_10254952	All Organisms → cellular organisms → Bacteria	1158
3300010360|Ga0126372_11694451	Not Available	673
3300010376|Ga0126381_100559904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1621
3300010376|Ga0126381_104800912	Not Available	520
3300010379|Ga0136449_101079172	All Organisms → cellular organisms → Bacteria	1281
3300010398|Ga0126383_12159185	Not Available	643
3300011090|Ga0138579_1071000	Not Available	552
3300011269|Ga0137392_11409661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556
3300011270|Ga0137391_10748522	All Organisms → cellular organisms → Bacteria	809
3300012202|Ga0137363_11224362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638
3300012206|Ga0137380_10428643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1171
3300012210|Ga0137378_11065153	Not Available	723
3300012361|Ga0137360_10346548	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	1243
3300012361|Ga0137360_11700831	All Organisms → cellular organisms → Bacteria → Acidobacteria	536
3300012927|Ga0137416_11143420	All Organisms → cellular organisms → Bacteria → Acidobacteria	700
3300012957|Ga0164303_10757869	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	662
3300012971|Ga0126369_10171543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2063
3300012971|Ga0126369_10441508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1348
3300012987|Ga0164307_11471838	Not Available	575
3300013297|Ga0157378_12896144	Not Available	532
3300014654|Ga0181525_10820708	Not Available	525
3300014655|Ga0181516_10666153	Not Available	538
3300016404|Ga0182037_11828837	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	543
3300016445|Ga0182038_10348647	All Organisms → cellular organisms → Bacteria	1226
3300017933|Ga0187801_10098810	Not Available	1107
3300017934|Ga0187803_10105724	All Organisms → cellular organisms → Bacteria → Acidobacteria	1105
3300017934|Ga0187803_10356799	All Organisms → cellular organisms → Bacteria → Acidobacteria	588
3300017936|Ga0187821_10255402	All Organisms → cellular organisms → Bacteria	686
3300017936|Ga0187821_10366334	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	584
3300017942|Ga0187808_10480292	All Organisms → cellular organisms → Bacteria	574
3300017943|Ga0187819_10511280	Not Available	685
3300017995|Ga0187816_10566387	Not Available	511
3300018002|Ga0187868_1140555	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	887
3300018004|Ga0187865_1268766	Not Available	567
3300018006|Ga0187804_10027358	Not Available	2125
3300018007|Ga0187805_10257032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801
3300018008|Ga0187888_1359131	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553
3300018008|Ga0187888_1379658	Not Available	535
3300018035|Ga0187875_10342341	All Organisms → cellular organisms → Bacteria → Acidobacteria	805
3300018042|Ga0187871_10198142	Not Available	1123
3300018043|Ga0187887_10606268	Not Available	646
3300018062|Ga0187784_11084069	Not Available	636
3300018085|Ga0187772_10715127	Not Available	719
3300018088|Ga0187771_10619392	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	918
3300018088|Ga0187771_11688656	Not Available	538
3300019275|Ga0187798_1357899	All Organisms → cellular organisms → Bacteria	1100
3300019787|Ga0182031_1258556	All Organisms → cellular organisms → Bacteria	1540
3300020579|Ga0210407_10115237	All Organisms → cellular organisms → Bacteria → Acidobacteria	2052
3300020581|Ga0210399_10141540	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1985
3300020582|Ga0210395_10429378	Not Available	994
3300021170|Ga0210400_10457540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1053
3300021181|Ga0210388_11179679	All Organisms → cellular organisms → Bacteria	650
3300021404|Ga0210389_11401552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533
3300021405|Ga0210387_10579616	Not Available	997
3300021406|Ga0210386_10324524	Not Available	1322
3300021407|Ga0210383_10817885	All Organisms → cellular organisms → Bacteria → Acidobacteria	797
3300021474|Ga0210390_10633419	All Organisms → cellular organisms → Bacteria	895
3300021476|Ga0187846_10258810	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	722
3300021559|Ga0210409_11621646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523
3300022726|Ga0242654_10401051	Not Available	526
3300025910|Ga0207684_10972398	All Organisms → cellular organisms → Bacteria	711
3300025917|Ga0207660_10930318	All Organisms → cellular organisms → Bacteria → Acidobacteria	709
3300025920|Ga0207649_10501150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	923
3300025986|Ga0207658_11202402	Not Available	693
3300026221|Ga0209848_1081020	All Organisms → cellular organisms → Bacteria → Acidobacteria	570
3300027674|Ga0209118_1087132	All Organisms → cellular organisms → Bacteria	890
3300027676|Ga0209333_1198581	All Organisms → cellular organisms → Bacteria → PVC group	529
3300027857|Ga0209166_10538025	All Organisms → cellular organisms → Bacteria → Acidobacteria	598
3300027889|Ga0209380_10540683	Not Available	678
3300027911|Ga0209698_10309594	All Organisms → cellular organisms → Bacteria	1249
3300028766|Ga0302269_1091945	All Organisms → cellular organisms → Bacteria	899
3300028800|Ga0265338_10638420	Not Available	739
3300029910|Ga0311369_10946482	Not Available	684
3300030007|Ga0311338_10066059	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4698
3300030503|Ga0311370_10686853	All Organisms → cellular organisms → Bacteria	1205
3300030520|Ga0311372_10224073	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3096
3300030878|Ga0265770_1084214	Not Available	626
3300031128|Ga0170823_14708028	All Organisms → cellular organisms → Bacteria	521
3300031711|Ga0265314_10708505	Not Available	508
3300031718|Ga0307474_10114174	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2025
3300031823|Ga0307478_10070716	All Organisms → cellular organisms → Bacteria → Acidobacteria	2638
3300031823|Ga0307478_11068646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674
3300031962|Ga0307479_10880750	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	868
3300032001|Ga0306922_11996913	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	565
3300032160|Ga0311301_10682500	All Organisms → cellular organisms → Bacteria	1450
3300032261|Ga0306920_101764739	Not Available	874
3300032805|Ga0335078_11615944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716
3300032895|Ga0335074_10501010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1260
3300032895|Ga0335074_10584267	All Organisms → cellular organisms → Bacteria	1122
3300032897|Ga0335071_10176876	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2086
3300032898|Ga0335072_10822363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	884
3300033134|Ga0335073_11279827	Not Available	727
3300033158|Ga0335077_11304738	Not Available	705
3300033158|Ga0335077_11419073	All Organisms → cellular organisms → Bacteria	668

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.12%
Host-Associated	Host-Associated	4.88%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.29%
Aquatic	Environmental → Aquatic	26.83%
Plants	Host-Associated → Plants	4.88%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.41%
Freshwater	Environmental → Aquatic → Freshwater	21.14%
Sediment	Environmental → Aquatic → Sediment	5.69%
Peat	Environmental → Terrestrial → Peat	4.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.06%
Cave	Environmental → Terrestrial → Cave	0.81%
Roots	Host-Associated → Plants → Roots	0.81%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.46%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	21.14%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.63%
Loam	Environmental → Terrestrial → Soil → Loam	7.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.06%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.25%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.81%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.07%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.20%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.76%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	8.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.06%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.06%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.25%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.44%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.44%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.81%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.76%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	8.13%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.50%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.50%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.69%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.69%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.06%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.25%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.25%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.25%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.25%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.44%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.44%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.44%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.63%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.63%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.63%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.81%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.81%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.81%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.81%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.81%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental
3300010379	Sb_50d combined assembly	Environmental
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental
3300011090	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome) (version 2)	Environmental
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated
3300026221	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062 (SPAdes)	Environmental
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental
3300028766	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_2	Environmental
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated
3300029910	III_Palsa_E2 coassembly	Environmental
3300030007	I_Palsa_E1 coassembly	Environmental
3300030503	III_Palsa_E3 coassembly	Environmental
3300030520	III_Palsa_N2 coassembly	Environmental
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_103255051	3300001356	Peatlands Soil	VEVKTRTGYAIAEFSPAGLNLDEVRKSCDLTPKKPSKD*
JGIcombinedJ26739_1018838142	3300002245	Forest Soil	GAQIFKVELPTQSGRQIAEFTPGGLSIDQVRRACDLTPKKPSKD*
Ga0062387_1013012562	3300004091	Bog Forest Soil	RGMMGANIFNIALPTRSGRQIAEFSPSGLNFDRVKQACDLTPKKPSKD*
Ga0062389_1020079411	3300004092	Bog Forest Soil	LIGAQVFKIQIPGQRGQEIAEFSPAGLNLAQFKQACDLTYKKPSN*
Ga0062388_1018339502	3300004635	Bog Forest Soil	NIALPTRSGRQIAEFSPAGLNLDRVKQACDLTPKKPSKD*
Ga0066679_103101972	3300005176	Soil	ARVFNIALPTRSGRQIAEFSPAGLNLERVRQACDLTPKKPSKD*
Ga0070706_1005251681	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VFKVELRTRSGRQIAEFSPGGLNLDRVKQACDLTPKKPSTD*
Ga0070734_104152501	3300005533	Surface Soil	ALPNRNGREIAEFSPAGLNVDQVRSACDLTPKRPSKD*
Ga0066692_107011291	3300005555	Soil	HIFKVQIPGQRGPEIAEFSPAGLDLARVKQACDLTPKKPSKN*
Ga0070766_107152341	3300005921	Soil	LPTRNGREIAEFSPAGLNLDEVHKSCDLTPKKPSKD*
Ga0075017_1012191542	3300006059	Watersheds	VELRGQYGPEIAEFSPSGLDLARVKQTCDLTSKKPSKN*
Ga0075015_1005314931	3300006102	Watersheds	VFNVALPTRSGRQIAEFSPTGLNFDRVKQACDLTPKKPSKD*
Ga0075015_1005975462	3300006102	Watersheds	LMQAHVFNIAIPTRSGRQIAEFQPDGLNIDQVHKACDLSPKKPSKD*
Ga0075015_1006345182	3300006102	Watersheds	MGANVFNVALPTRSGRQIAEFSPGGLDFARVKQACDLTPKKPSKD*
Ga0075030_1014304771	3300006162	Watersheds	IAIPTRSGRQIAEFQPDGLNIDQVHKACDLSPKKPSKD*
Ga0070716_1000876203	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	TVFNIAIPTRSGRQIAEFDPAGLNIDQVRKACDITPKKPSAD*
Ga0075014_1004123222	3300006174	Watersheds	FNVALPTRSGRQIAEFSPGGLNVDRVRQACDLTPKKPSKD*
Ga0068871_1004293402	3300006358	Miscanthus Rhizosphere	RNGPEIAEFSPAGLDLGRVKQACDLTPKKPSSDD*
Ga0066658_107720142	3300006794	Soil	VFKVELPTRSGRQIAKFSPGGLNLDRVRQACDLTSKKPSKD*
Ga0066793_104151042	3300009029	Prmafrost Soil	AQVFKIELPTRSGRQIAEFTPGGLNIDQVRHACDIAPKKPSKD*
Ga0099829_117518742	3300009038	Vadose Zone Soil	QVFKVELPTRSGRQIAEFTPGGLNVDQVRQACDLTPKKPSKD*
Ga0116214_13505332	3300009520	Peatlands Soil	KVFKVELPTRSGRQIAEFSPGGLNFDRIKRACDLTPKKPSTD*
Ga0116125_11693021	3300009628	Peatland	QVFNVALPTRNGREIAEFAPAGLNIDQVRQACDITPKKPSKD*
Ga0116110_11973052	3300009643	Peatland	FKVELPTRSGRQIAEFSPGGLNPDRIKQACDLTPKKPSTD*
Ga0116110_12723442	3300009643	Peatland	AAQVFNIAMPTRSGRQIAEFSPAGLNVERVKQACDLTPKKPSKD*
Ga0116130_13068302	3300009762	Peatland	ELPTRSGRQIAEFSPGGLNLDRIRQACELTPKKPSTD*
Ga0126384_113398251	3300010046	Tropical Forest Soil	NVALPTRSGRQIAEFSPAGLYTDQVLRACDLTPKKPSKD*
Ga0126384_116347002	3300010046	Tropical Forest Soil	AIPTRSGRQIAEFDPAGLDPQEVRKACDLTPKKPSGD*
Ga0074044_100132851	3300010343	Bog Forest Soil	LPTRSGRQIAEFSPAGLDFGRVKEACDLTPKKPSKE*
Ga0074044_102549521	3300010343	Bog Forest Soil	MPTRSGRQIAEFSPAGLNLDRVKEACDLTPKKPSKD*
Ga0126372_116944511	3300010360	Tropical Forest Soil	QAQVFNIAIPTRSGRQIAEFDPDGLDTGQVQKVCDLTPKKPSKD*
Ga0126381_1005599043	3300010376	Tropical Forest Soil	GMIQAQVFNIAIPTRSGRQIAEFDPDGLDTGQVQKVCDLTPKKPSKD*
Ga0126381_1048009121	3300010376	Tropical Forest Soil	GSQVFNISLPTRSGRQIAEFSPFGLDLDQVRHACDITPKKPSKD*
Ga0136449_1010791724	3300010379	Peatlands Soil	WAKVFKVELRTRSGRQIAEFSPGELNFDRIKQACDLTPKKPSTD*
Ga0126383_121591851	3300010398	Tropical Forest Soil	IQAQVFNIAIPTRSGRQIAEFDPDGLDTGQVQKVCDLTPKKPSKD*
Ga0138579_10710002	3300011090	Peatlands Soil	IGAQVFNVKLPTRSGRQIAEFSPSGLDLDRAKHPCDLTPKKPSSD*
Ga0137392_114096612	3300011269	Vadose Zone Soil	VFKVELPTRSGRQIAEFTPGGLNVDQVRQACDLTPKKPSKD*
Ga0137391_107485222	3300011270	Vadose Zone Soil	QVFKVELPTRSGRQIAEFSPGGLNLDRVRQACDLTPKKPSRD*
Ga0137363_112243622	3300012202	Vadose Zone Soil	EIRGRRGPEIAEFSPGGLDLARVKQACDLTAKRPGKD*
Ga0137380_104286432	3300012206	Vadose Zone Soil	KVEIRGRRGPEIAEFSPGGLDLARVKHVCDLTPKR*
Ga0137378_110651531	3300012210	Vadose Zone Soil	LRTRSGRQIAEFAPAGLNVDQVRQACDVTPKKPSKD*
Ga0137360_103465482	3300012361	Vadose Zone Soil	KVELPTRSGRQIAEFSPGGLNLDRVRQACDLTPKKPSKD*
Ga0137360_117008311	3300012361	Vadose Zone Soil	VELPTRSGRQIAEFSPGGLNLDRVRQACDLTPKKPSKD*
Ga0137416_111434202	3300012927	Vadose Zone Soil	FKIEIPGRRGPEIAEFSPAGLDLARVKQVCDLTPKRPGGN*
Ga0164303_107578691	3300012957	Soil	IPTRSGRQIAEYQPEGLDINQVNKACDLTPKKPSKD*
Ga0126369_101715431	3300012971	Tropical Forest Soil	QAHIFNIAISTGGGRQIAEFQPAGLDIDQVRKACDLTPKKPSN*
Ga0126369_104415081	3300012971	Tropical Forest Soil	TRSGRQIAEFDPDGLDTGQVQKVCDLTPKKPSKD*
Ga0164307_114718382	3300012987	Soil	GVMGAQLVRIALPTRNGREIAEFSPSGLDANEVRRACDITPKKPSKD*
Ga0157378_128961441	3300013297	Miscanthus Rhizosphere	KVELRGRTGSEIAEFSPGGLDLGRVKQSCDLTPKKTSKN*
Ga0181525_108207081	3300014654	Bog	ALPMRNGREIAEFSPAGLDLGRVREACDLKPKKPSGD*
Ga0181516_106661531	3300014655	Bog	TRSGREIAEFAPAGLNIDQVRQACDITPKKPSKD*
Ga0182037_118288371	3300016404	Soil	NVAIPTRSGRQSAEFQPEGLDIDQVRRACDLTPKKPSKD
Ga0182038_103486472	3300016445	Soil	ARGMIQAQIFNIAIQTRSGRQIAEFDPDGLDAGEVRKACDMTPKKPSKD
Ga0187801_100988102	3300017933	Freshwater Sediment	VELPTRSGRQIAEFSPGGLDFARVKEGCDLTTQKPGHD
Ga0187803_101057241	3300017934	Freshwater Sediment	RGRNGPEIAEFSPAGLDLARVKQACDLTPRKPSKD
Ga0187803_103567991	3300017934	Freshwater Sediment	RGRNGPEIAEFSPAGLDLARVKQACDLTPRKPSKN
Ga0187821_102554021	3300017936	Freshwater Sediment	NVELRGRSGPEMAEFSPDGLDAGRFKEACNLTPKKPSND
Ga0187821_103663342	3300017936	Freshwater Sediment	NIAIPTRSGRQIAEFQPDGLNIDQVRKACDLSPKKPSKD
Ga0187808_104802921	3300017942	Freshwater Sediment	NIALPTRSGRQIAEFSPDGLDLDMVRKECDLTPKKPSKD
Ga0187819_105112802	3300017943	Freshwater Sediment	VFNVAIPTRSGRQIAEFRPDGLNIDQVRIACDLAPKKPSKD
Ga0187816_105663872	3300017995	Freshwater Sediment	NIEARTRGGAEIAEFSPAGLKLDLVRQSCDLTPKKPSKD
Ga0187868_11405551	3300018002	Peatland	PTPSSRQIAEFSPAGLNLDRVRQACDLTPKKPSKD
Ga0187865_12687662	3300018004	Peatland	AQVFKVELPTRSGRQIAEFSPGGLSLDRFKQACDLTPKKPSTD
Ga0187804_100273583	3300018006	Freshwater Sediment	MQAHVFNVAIPTRSGRQIAEFRPDGLNIDQVRIACDLAPKKPSKD
Ga0187805_102570321	3300018007	Freshwater Sediment	AHVFNIAIPTRSGRQIAEFQPDGLDIQQVRSACDLTPKKPSKD
Ga0187888_13591312	3300018008	Peatland	NIALPTRSGRQIAEFTPGGLNFDRVKQACDLTPKKPSKD
Ga0187888_13796582	3300018008	Peatland	QVFNIELPTFRSREIAEFSPAGLDFGRVREACDLKPKKPSKD
Ga0187875_103423412	3300018035	Peatland	VELPTRSGRQIAEFSPGGLNPDRIKQACDLTPKKPSTD
Ga0187871_101981421	3300018042	Peatland	VFNIALPTRSGRQIAEFSPAGLNLDEIKKSCDLTPKRPSKD
Ga0187887_106062682	3300018043	Peatland	LLGGQIFNIALPTRSGRQIAEFSPEGLNFDRVKQACDLAPKKPSKD
Ga0187784_110840691	3300018062	Tropical Peatland	IALPTRSGRQIAEFSPEGLNIDQVKQACDLTPKKPRAD
Ga0187772_107151271	3300018085	Tropical Peatland	GQIFNVQVRTRSGSQIAEFSPAGLNLDSVRQSCDLTPKKP
Ga0187771_106193921	3300018088	Tropical Peatland	IRGRSGPEIAEFSPAGLDLTRVKQACDLTPKKPAKY
Ga0187771_116886561	3300018088	Tropical Peatland	TIFKIEVRTRGGREIAEFSPAGLNLDAVRQSCDLTPKKP
Ga0187798_13578992	3300019275	Peatland	GAQVFKVELPTRSGRQIAEFSPGGLDFDRVRQDCDITPKKPSGD
Ga0182031_12585561	3300019787	Bog	MSAQVFNIALPTRSGRQIAEFTPGGLNFDRVKQACDLTPKKPSKD
Ga0210407_101152371	3300020579	Soil	TTRGLIGSQVFKVELPTRSGRQIAEFTPAGLDLDQVRHACDLTPKKPGKD
Ga0210399_101415401	3300020581	Soil	NVELPTRSGRQIAEFSPSGLNLDRIRQACDLTPKKPSKD
Ga0210395_104293783	3300020582	Soil	FNVALPTRSGREIAEFAPAGLNIDQVRQACDITPKKPSKD
Ga0210400_104575402	3300021170	Soil	TTRGLIGAQIFKVELPTQSGRQIAEFTPGGLSIDQVRRACDLTPKKPSKD
Ga0210388_111796792	3300021181	Soil	ALPTGSGRQIAEFSPVGLNLDRVKQACDLTPKKPSKD
Ga0210389_114015522	3300021404	Soil	KIELPGRRGSEIAEFSPGGLDLSQVKQACDLTPKKPSKD
Ga0210387_105796162	3300021405	Soil	PTRSGRQIAEFSPSGLNLDRIRQACDLTSKKPSKD
Ga0210386_103245241	3300021406	Soil	VFNVALPTRSGREIAEFAPAGLNIDQVRQACDITPKKPSKD
Ga0210383_108178851	3300021407	Soil	LPTRSGREIAEFSPAGLNLDEVRKSCDLSPKKPSKD
Ga0210390_106334192	3300021474	Soil	FNIALPTRSGRQIAEFSPAGLDFGRVGKACDLTPKKPSKD
Ga0187846_102588102	3300021476	Biofilm	ARGMIQAHVFNIAIQNRRGGRQIAEFQPDGLNVDEVRKACDITPKKPSRD
Ga0210409_116216462	3300021559	Soil	LIGAQIFKVELPTQSGRQIAEFTPGGLSIDQVRRACDLTPKKPSKD
Ga0242654_104010511	3300022726	Soil	VFKVELPTRSGQQIAEFSPAGLNLDRVRQACDITPKKP
Ga0207684_109723981	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VFKVELRTRSGRQIAEFSPGGLNLDRVKQACDLTPKKPSTD
Ga0207660_109303181	3300025917	Corn Rhizosphere	RGRNGPEIAEFSPAGLDLARVKEACDLTVKKPSKD
Ga0207649_105011501	3300025920	Corn Rhizosphere	RGRNGPEIAEFSPAGLDLARVKQTCDLTAKKPSRD
Ga0207658_112024022	3300025986	Switchgrass Rhizosphere	RGRKGPEIAEFSPAGLDLARVKQTCDLTPKKPSKN
Ga0209848_10810202	3300026221	Permafrost Soil	LGRRNPEIAEFSPAGLDLARVKQACDLNPKKPSKN
Ga0209118_10871321	3300027674	Forest Soil	FKVELPTRSGRQIAEFSPGGLNLDRIRQACDLTPKKPSKD
Ga0209333_11985812	3300027676	Forest Soil	GLLGAQLFNIELPTASGRQIAEFTPAGLNLDEVRKACDLTPKKPSKD
Ga0209166_105380251	3300027857	Surface Soil	KIEFLGRRGSQIAEFSPDGLDLTRVSQACGLTPKQP
Ga0209380_105406831	3300027889	Soil	ARGGREIAEFSPAGLDLGAVRQACDLKPKKPSSDD
Ga0209698_103095944	3300027911	Watersheds	FNVALPTRSGRQIAEFSPSGLNVDRVRQACDLTPKKPSKD
Ga0302269_10919452	3300028766	Bog	VFNIALPTRSGRQIAEFSPAGLNFDRIRQACDLTPKKPSKD
Ga0265338_106384202	3300028800	Rhizosphere	QVFKVELPTKSGRQIAEFSPAGLNVDEVRKACDLTPKKPSND
Ga0311369_109464822	3300029910	Palsa	SAQVFNIALPTRSGRQIAEFSPGGLNFERVKQACDLTPKKPSKD
Ga0311338_100660595	3300030007	Palsa	LPTRSGRQIAEFSPAGLDFDRVRKACDLTPKKPSKD
Ga0311370_106868531	3300030503	Palsa	QLFNIAAPTRFGREIAEFSPSGLNLDEVKKSCDLTPKKP
Ga0311372_102240733	3300030520	Palsa	FKIEVPTPSGRQIAEFTPAGLNQDEVRHACDLAPKKPSKD
Ga0265770_10842141	3300030878	Soil	ELRGRAGSEIAEFSPGGLDLAQARQACDLTPKKPGKD
Ga0170823_147080282	3300031128	Forest Soil	IFKVEIPGRRGPEIAEFSPAGLDLARVKQDCDLNPKKPSKN
Ga0265314_107085051	3300031711	Rhizosphere	KVELPTKSGRQIAEFSPAGLNVDEVRKACDLTPKKPSND
Ga0307474_101141741	3300031718	Hardwood Forest Soil	TTRGLMQAHVFNIAIPTRSGRQIAEFQPEGLDVDQVRKACDLTPKKPSKD
Ga0307478_100707161	3300031823	Hardwood Forest Soil	QVFNIALPTPSGRQIAEFSPAGLNLDQVRQYCDLTPKKPSKD
Ga0307478_110686462	3300031823	Hardwood Forest Soil	AIPTRSGRQIAEFQPEGLDVDQVRKACDLTPKKPSKD
Ga0307479_108807501	3300031962	Hardwood Forest Soil	FKIELPTRSGRQIAEFSPAGLNLDQVRHACDLTPKKPSKD
Ga0306922_119969131	3300032001	Soil	KAQVFKIALPTRSGRQIAEFSPDGLDVDQVRKACDITPKKPSKD
Ga0311301_106825001	3300032160	Peatlands Soil	WAKVFKVELRTRSGRQIAEFSPGELNFDRIKQACDLTPKKPSTD
Ga0306920_1017647391	3300032261	Soil	VFKIALPTRSGRQIAEFSPDGLDVDQVRKACDITPKKPSKD
Ga0335078_116159442	3300032805	Soil	VFNIALPTASGRQIAEFSPAGLNVDQVRKACDLTPKKPD
Ga0335074_105010101	3300032895	Soil	FNIALPTPSGRQIAEFSPAGLNIDEVRKVCDLTPKKPSKD
Ga0335074_105842671	3300032895	Soil	ALPTRSGRQIAEFSPAGLDLGLVKKECDLTPKKPSKD
Ga0335071_101768763	3300032897	Soil	GTARGMVGAHIFNIAIPTRSGRQIAEFDPAGLNIDQVHKACDITPKKPSSD
Ga0335072_108223632	3300032898	Soil	FKVELPTRSGREIAEFSPAGLDLDQVRKACDITPKKPSKD
Ga0335073_112798272	3300033134	Soil	VFNVALPTRSGREIAEFSPAGLNVDQVRQSCDITPKRPSKD
Ga0335077_113047382	3300033158	Soil	TIFKIEVRTRGGREIAEFSPAGLNLDTVRQSCDLTPKKP
Ga0335077_114190732	3300033158	Soil	FNVALPTRSGRQIAQFSPAGLDFSRVKEACDLTPKKPSND