Metagenome / Metatranscriptome Family F070498

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070498
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	102 residues
Representative Sequence	MVDTTNTQAEQTQTTEMPGTETPTPDEKSDRDELKEASQQFFRTLFQAGVHLAMTPVNMLPEEPREHFVSAGREFTRGLATLAHELADNFDKIVDEVKEDVGKDE
Number of Associated Samples	96
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.29 %
% of genes near scaffold ends (potentially truncated)	29.27 %
% of genes from short scaffolds (< 2000 bps)	82.11 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.431 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (26.829 % of family members)
Environment Ontology (ENVO)	Unclassified (30.894 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.220 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.64% β-sheet: 0.00% Coil/Unstructured: 44.36%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF03109	ABC1	16.26
PF04199	Cyclase	7.32
PF03447	NAD_binding_3	3.25
PF00742	Homoserine_dh	3.25
PF13396	PLDc_N	1.63
PF02782	FGGY_C	1.63
PF01594	AI-2E_transport	1.63
PF05128	DUF697	1.63
PF00931	NB-ARC	1.63
PF09851	SHOCT	0.81
PF13196	DUF4012	0.81
PF00753	Lactamase_B	0.81
PF01258	zf-dskA_traR	0.81
PF02776	TPP_enzyme_N	0.81
PF06897	DUF1269	0.81
PF13189	Cytidylate_kin2	0.81
PF03729	DUF308	0.81
PF00486	Trans_reg_C	0.81
PF00578	AhpC-TSA	0.81
PF14104	DUF4277	0.81
PF00196	GerE	0.81
PF00472	RF-1	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0661	Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family	Signal transduction mechanisms [T]	16.26
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	7.32
COG0460	Homoserine dehydrogenase	Amino acid transport and metabolism [E]	3.25
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	1.63
COG3768	Uncharacterized membrane protein YcjF, UPF0283 family	Function unknown [S]	1.63
COG0216	Protein chain release factor RF1	Translation, ribosomal structure and biogenesis [J]	0.81
COG1186	Protein chain release factor PrfB	Translation, ribosomal structure and biogenesis [J]	0.81
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	0.81
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.81
COG4803	Uncharacterized membrane protein	Function unknown [S]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.43 %
Unclassified	root	N/A	10.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.43 %
Unclassified	root	N/A	10.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.43 %
Unclassified	root	N/A	10.57 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	84.55 %
Unclassified	root	N/A	10.57 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	84.55 %
Unclassified	root	N/A	10.57 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	62.60 %
Unclassified	root	N/A	10.57 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	4.88 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.81 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	62.60 %
Unclassified	root	N/A	10.57 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	3.25 %
Chloroflexales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales	0.81 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	62.60 %
Unclassified	root	N/A	10.57 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	3.25 %
Chloroflexineae	suborder	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae	0.81 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	62.60 %
Unclassified	root	N/A	10.57 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	3.25 %
Chloroflexaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Chloroflexaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	62.60 %
Unclassified	root	N/A	10.57 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	3.25 %
Chloroflexus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Chloroflexaceae → Chloroflexus	0.81 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	62.60 %
Unclassified	root	N/A	10.57 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	3.25 %
unclassified Chloroflexus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Chloroflexaceae → Chloroflexus → unclassified Chloroflexus	0.81 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	62.60 %
Unclassified	root	N/A	10.57 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	3.25 %
Chloroflexus sp. Y-396-1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Chloroflexaceae → Chloroflexus → unclassified Chloroflexus → Chloroflexus sp. Y-396-1	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10117191	Not Available	1886	Open in IMG/M
3300004152\|Ga0062386_100258826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1380	Open in IMG/M
3300005164\|Ga0066815_10075598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	598	Open in IMG/M
3300005166\|Ga0066674_10074806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1554	Open in IMG/M
3300005172\|Ga0066683_10487762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	753	Open in IMG/M
3300005172\|Ga0066683_10674007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	617	Open in IMG/M
3300005435\|Ga0070714_100829357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	896	Open in IMG/M
3300005436\|Ga0070713_101120397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	761	Open in IMG/M
3300005437\|Ga0070710_10634060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	747	Open in IMG/M
3300005467\|Ga0070706_100046109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	4024	Open in IMG/M
3300005529\|Ga0070741_10033470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	7013	Open in IMG/M
3300005537\|Ga0070730_10142262	All Organisms → cellular organisms → Bacteria	1632	Open in IMG/M
3300005552\|Ga0066701_10196512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1235	Open in IMG/M
3300005553\|Ga0066695_10395155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	859	Open in IMG/M
3300005553\|Ga0066695_10853075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	522	Open in IMG/M
3300005555\|Ga0066692_10265330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1086	Open in IMG/M
3300005558\|Ga0066698_10929557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	555	Open in IMG/M
3300006046\|Ga0066652_100976323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	805	Open in IMG/M
3300006050\|Ga0075028_100481616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	722	Open in IMG/M
3300006052\|Ga0075029_100210483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1217	Open in IMG/M
3300006057\|Ga0075026_100440948	Not Available	739	Open in IMG/M
3300006173\|Ga0070716_100237750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1233	Open in IMG/M
3300006174\|Ga0075014_100883642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Chloroflexaceae → Chloroflexus → unclassified Chloroflexus → Chloroflexus sp. Y-396-1	534	Open in IMG/M
3300006755\|Ga0079222_11269103	Not Available	667	Open in IMG/M
3300006796\|Ga0066665_10224625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1472	Open in IMG/M
3300006796\|Ga0066665_11675637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	503	Open in IMG/M
3300006800\|Ga0066660_10302870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1277	Open in IMG/M
3300006893\|Ga0073928_10099672	All Organisms → cellular organisms → Bacteria	2441	Open in IMG/M
3300007265\|Ga0099794_10340776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	779	Open in IMG/M
3300007982\|Ga0102924_1080065	All Organisms → cellular organisms → Bacteria	1730	Open in IMG/M
3300007982\|Ga0102924_1148618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1086	Open in IMG/M
3300009012\|Ga0066710_100557657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1734	Open in IMG/M
3300009012\|Ga0066710_102837770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	683	Open in IMG/M
3300009029\|Ga0066793_10103081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1654	Open in IMG/M
3300009038\|Ga0099829_10181873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	1693	Open in IMG/M
3300009088\|Ga0099830_10413024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	1092	Open in IMG/M
3300009089\|Ga0099828_10410921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1220	Open in IMG/M
3300009137\|Ga0066709_101651411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	913	Open in IMG/M
3300009137\|Ga0066709_103433410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	575	Open in IMG/M
3300010104\|Ga0127446_1013883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	750	Open in IMG/M
3300010143\|Ga0126322_1211487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	586	Open in IMG/M
3300010143\|Ga0126322_1281027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	640	Open in IMG/M
3300010154\|Ga0127503_10293005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3791	Open in IMG/M
3300010154\|Ga0127503_10425610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1017	Open in IMG/M
3300010329\|Ga0134111_10072324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1288	Open in IMG/M
3300010336\|Ga0134071_10383736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	714	Open in IMG/M
3300010379\|Ga0136449_100406597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2412	Open in IMG/M
3300010379\|Ga0136449_101249775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1163	Open in IMG/M
3300010379\|Ga0136449_101470428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1046	Open in IMG/M
3300010379\|Ga0136449_104685205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	500	Open in IMG/M
3300010937\|Ga0137776_1441421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5443	Open in IMG/M
3300011269\|Ga0137392_10012974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5602	Open in IMG/M
3300012019\|Ga0120139_1138506	Not Available	629	Open in IMG/M
3300012198\|Ga0137364_10923824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	661	Open in IMG/M
3300012199\|Ga0137383_10025867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4097	Open in IMG/M
3300012199\|Ga0137383_10224954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1375	Open in IMG/M
3300012199\|Ga0137383_10972880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	619	Open in IMG/M
3300012201\|Ga0137365_10058462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2910	Open in IMG/M
3300012201\|Ga0137365_10162694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1673	Open in IMG/M
3300012201\|Ga0137365_10484060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	910	Open in IMG/M
3300012201\|Ga0137365_10574560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	827	Open in IMG/M
3300012201\|Ga0137365_10670419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	759	Open in IMG/M
3300012202\|Ga0137363_10270232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1387	Open in IMG/M
3300012202\|Ga0137363_11347982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	603	Open in IMG/M
3300012205\|Ga0137362_10374122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1234	Open in IMG/M
3300012206\|Ga0137380_10000361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	32320	Open in IMG/M
3300012206\|Ga0137380_10141440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2194	Open in IMG/M
3300012210\|Ga0137378_10787597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	863	Open in IMG/M
3300012211\|Ga0137377_10096099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2802	Open in IMG/M
3300012211\|Ga0137377_10096975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2789	Open in IMG/M
3300012211\|Ga0137377_10102131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2717	Open in IMG/M
3300012211\|Ga0137377_11928614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	507	Open in IMG/M
3300012349\|Ga0137387_10997713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	601	Open in IMG/M
3300012354\|Ga0137366_10591264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	796	Open in IMG/M
3300012356\|Ga0137371_10240378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1415	Open in IMG/M
3300012356\|Ga0137371_10603733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	843	Open in IMG/M
3300012356\|Ga0137371_10628609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	824	Open in IMG/M
3300012356\|Ga0137371_11075045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	606	Open in IMG/M
3300012359\|Ga0137385_10165603	Not Available	1941	Open in IMG/M
3300012386\|Ga0134046_1125417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1092	Open in IMG/M
3300012398\|Ga0134051_1299486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	537	Open in IMG/M
3300012976\|Ga0134076_10042807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1690	Open in IMG/M
3300014056\|Ga0120125_1175375	Not Available	528	Open in IMG/M
3300015357\|Ga0134072_10290742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	605	Open in IMG/M
3300015372\|Ga0132256_103243299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	547	Open in IMG/M
3300017821\|Ga0187812_1026867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1975	Open in IMG/M
3300017934\|Ga0187803_10216485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	756	Open in IMG/M
3300017939\|Ga0187775_10175554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	780	Open in IMG/M
3300017942\|Ga0187808_10156970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1004	Open in IMG/M
3300017955\|Ga0187817_10869385	Not Available	576	Open in IMG/M
3300017966\|Ga0187776_10537859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	805	Open in IMG/M
3300018468\|Ga0066662_12622558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	533	Open in IMG/M
3300018468\|Ga0066662_12994639	Not Available	502	Open in IMG/M
3300020581\|Ga0210399_10097657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2400	Open in IMG/M
3300021088\|Ga0210404_10032049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2361	Open in IMG/M
3300021178\|Ga0210408_11361427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	536	Open in IMG/M
3300021388\|Ga0213875_10178732	Not Available	997	Open in IMG/M
3300021478\|Ga0210402_11135391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	709	Open in IMG/M
3300021559\|Ga0210409_10573657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	995	Open in IMG/M
3300021559\|Ga0210409_10946105	Not Available	736	Open in IMG/M
3300021860\|Ga0213851_1058300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	518	Open in IMG/M
3300022525\|Ga0242656_1092869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	581	Open in IMG/M
3300022557\|Ga0212123_10012400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	11445	Open in IMG/M
3300025910\|Ga0207684_10016576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	6325	Open in IMG/M
3300026297\|Ga0209237_1068188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1687	Open in IMG/M
3300026327\|Ga0209266_1003901	All Organisms → cellular organisms → Bacteria	9050	Open in IMG/M
3300026538\|Ga0209056_10102255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2334	Open in IMG/M
3300026721\|Ga0208841_101835	Not Available	718	Open in IMG/M
3300026920\|Ga0208575_1004976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1429	Open in IMG/M
3300027523\|Ga0208890_1063168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	598	Open in IMG/M
3300027660\|Ga0209736_1167181	Not Available	580	Open in IMG/M
3300027667\|Ga0209009_1004913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3213	Open in IMG/M
3300027825\|Ga0209039_10102874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1223	Open in IMG/M
3300027846\|Ga0209180_10132331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1433	Open in IMG/M
3300027857\|Ga0209166_10028257	All Organisms → cellular organisms → Bacteria	3427	Open in IMG/M
3300027862\|Ga0209701_10618500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	571	Open in IMG/M
3300027915\|Ga0209069_10067686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1693	Open in IMG/M
3300029636\|Ga0222749_10080378	All Organisms → cellular organisms → Bacteria	1497	Open in IMG/M
3300031753\|Ga0307477_11088231	Not Available	522	Open in IMG/M
3300032160\|Ga0311301_12286161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	616	Open in IMG/M
3300032205\|Ga0307472_100856421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	837	Open in IMG/M
3300033433\|Ga0326726_11073127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	783	Open in IMG/M
3300034090\|Ga0326723_0167762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	968	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.37%
Host-Associated	Host-Associated	1.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.30%
Aquatic	Environmental → Aquatic	17.07%
Plants	Host-Associated → Plants	1.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.67%
Freshwater	Environmental → Aquatic → Freshwater	8.94%
Thermal Springs	Environmental → Aquatic → Thermal Springs	4.06%
Sediment	Environmental → Aquatic → Sediment	4.06%
Peat	Environmental → Terrestrial → Peat	1.63%
Roots	Host-Associated → Plants → Roots	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.29%
Loam	Environmental → Terrestrial → Soil → Loam	8.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.88%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	4.06%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.06%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	3.25%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.44%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.63%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.81%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.07%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.06%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.06%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.25%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	3.25%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.25%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.63%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.63%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.81%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.81%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	26.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.69%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.06%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.06%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.06%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.25%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	3.25%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.25%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.44%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.44%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.63%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.63%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.63%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.63%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.81%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.81%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010104	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010143	Soil microbial communities from Mekong Delta, Cambodia to study soil gas exchange rates - MK-CA-DRY metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012386	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012398	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026721	Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN395 (SPAdes)	Environmental	Open in IMG/M
3300026920	Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN397 (SPAdes)	Environmental	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_101171912	3300001593	Forest Soil	MIDPTKNQAEQTTDTPGVEEPASDEKSNRDELMEASQQFFRALFRTGVHVAMTPVSMLPEESRQHFLSAGREFTRGLATMAHELSNAFDKMAEEVKEDVEKDK*
Ga0062386_1002588261	3300004152	Bog Forest Soil	MADTKNKQEEQAQTQTTETPGMETPIPDYKSDRDELKEASQQFFRTLFRAGVHVAMAPVYMLPEEPRDHFVTAGREITRGLATLAHELADDFEKAVEQMREEVEED*
Ga0066815_100755981	3300005164	Soil	MVDTTKTQAEQAQTTETPGTETPTPDEKTDRDELKEASQQFFRTLFRAGVHLAMTPVYMLPDEPREHFVSAGREFTRGLATLARELAVDFDKMVDEVKEELEKDK*
Ga0066674_100748062	3300005166	Soil	MVDTTKMQAEQAQTTETPGTETPTPDEKSDRDELKEASQQFFRTLFRAGVHLAMAPVYMLPDEPREHFVSAGREFTRGLATLARELAVDFDKMVDEVKEELEKDK*
Ga0066683_104877621	3300005172	Soil	MVDTKKTQRGQAQEQADTQTSSSSEAPDYKSDRDELKEASQQLFRALFRTGVHVAMAPVYMLPEEPRDHFITAGREITRGLATLAHELADDFEKAVDQMREEVERV*
Ga0066683_106740071	3300005172	Soil	MVDPTNMQAEQTQTTETPGTQTPTPDEKTDRDELKEASQQFFRTLFRAGVHLAMTPVSMLPEEPREHFVSAGREFTRGLATLAHELADNFDKIVDDVKADVEKDT*
Ga0070714_1008293572	3300005435	Agricultural Soil	MVDTTNTQAEQTQTTEMPGTETPTPDEKSDRDELKEASQQFFRTLFQAGVHLAMTPVNMLPEEPREHFVSAGREFTRGLATLAHELADNFDKIVSEVKADVEKDL*
Ga0070713_1011203971	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MADTTNMQAEQAKTTETPGTQTPTSEEKTDRDELKEASQQFFRTLFRAGVHLAMTPVSMLPEEPREHFVSAGREFTRGLATLAHELADNFDKIVNEVKADVEKDL*
Ga0070710_106340602	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LHKQGGKCMADTTNMQAEQVQTTETPGTQTPTPEEKTDRDELKEASQQFFRTLFRAGVHLAMTPVSMLPEEPREHFVSAGREFTRGLATLAHELADNFDKIVNEVKADVEKDL*
Ga0070706_1000461096	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MVDPTNLQAEQTQTTEMPGTDTPTPDEKFERNVLKEVSQQFFRTLFRSGVHLVMTPVSLLPEEPREHFVSAGREFTRGLATIAHELAGNFDKIVDEVKTDGEKD*
Ga0070741_100334702	3300005529	Surface Soil	MVDPTKNQAEQATETPDVEASAFDEKSNRDELRESSQQFFRALFRTGVHAAMTPVAMLPEEPRQHFLSAGREFTRGLAALTHELSNVFDKMAEEVKGDAERDR*
Ga0070730_101422622	3300005537	Surface Soil	MTDPTKKQAEQTQATETPVVDTPTSDAPASEEKTNFDELRESSQQFFRSLVRTGVQVAMTPVSMLPQEPRQHFLSAGREFSRGLATLAHELSNVFDRLAEEAKEKVEGDQEQDL*
Ga0066701_101965121	3300005552	Soil	MVDPTNMQAEQTQTTQTPGTQTPTPDEQSNRDELKEASQQFFHALFRAGVQLAMTPMSMLPEEPREHFVSAGREFTRGLATLAHELADNFDKIVDEVKADVEKDAMK*
Ga0066695_103951552	3300005553	Soil	MEDTTNTQAEQTHTTEMPDTEIPTPNEQSDRDELKEASQQFIRTLFRVGVHLAMTPVSMLPEEPREHFASAGREFTHGLATLAHEVADNFDKIVEEMKTDVKKD*
Ga0066695_108530752	3300005553	Soil	MVDTKKTQRGQAQEQTDTQTSSTSKAPDYKSDRDELKEASQQLFRALFRTGVHVAMAPVYMLPEEPRDHFITAGREITR
Ga0066692_102653302	3300005555	Soil	MVYTTKMQAEQAQTTGTPGTETPTPDEKSDRDELKEASQQFFRTLFRAGVHLAMAPVYMLPDEPREHFVSAGREFTRGLATLARELAVDFDKMVDEVKEELEKDK*
Ga0066698_109295571	3300005558	Soil	MVDTKKTQRGQAQEQTDTQTSSTSKAPDYKSDRDELKEASQQLFRALFRTGVHVAMAPVYMLPEEPRDHFITAGREITRGLATLAHELADDFEKAVDQ
Ga0066652_1009763232	3300006046	Soil	MEDTTNTQAEQTHTTEMPDTEIPTPNEQSDRDELKEASQQFIRTLFRVGVHLAMTPVSMLPEEPREHFASAGREFTHGLATLAHELADNFDKIVEEMKTDVKKD*
Ga0075028_1004816161	3300006050	Watersheds	MEDTTKEQAEQTQTAETPGTETPTPDEKSDHDELMEASQQFFRTLFQAGVHLARTSVNMLPEEPREHIMSAGREFTRGLATFAHELADNFDKIVDEGKEDVGKDE*
Ga0075029_1002104831	3300006052	Watersheds	RMEDTTKEHAKQTHSAEMPDTETPTPDEKSSRDELKEASQQFFRTLIRAGVHLATTSVNMLPEESREHLVSAGREFTRGLATFAHELANNVDTIVDEAKEDTDSL*
Ga0075026_1004409481	3300006057	Watersheds	AHTTETPGSDTPTPEEKSDRDELKEASQQFFRTLFQAGAHLARTSVNMLPEESREHIVSAGREFTRGLATFAHELADNFDRIADEGKEDAGKDE*
Ga0070716_1002377502	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LHKQGGKCMADTTNMQAEQAKTTETPGTQTPTSEEKTDRDELKEASQQFFRTLFRAGVHLAMTPVSMLPEEPREHFVSAGREFTRGLATLAHELADNFDKIVNEVKADVEKDL*
Ga0075014_1008836421	3300006174	Watersheds	MEDTTNTQAEQAQTTEMPGTETPTPDEKIDRDELKEASQQFFRTLLRAGVHLAMTPVSMLPEESREHFVSAGREFTRGLATFAHELADNFDKIVDEVKEDVGKDK*
Ga0079222_112691031	3300006755	Agricultural Soil	EMPDIDTPASEEKTHFDELRESSQQFFRSLFRTGVQVAMTPVSMLPQEPRQHFLSAGREFSRGLATLAHELSNVFDRMAEEAKEKAEGSQEQEQDL*
Ga0066665_102246252	3300006796	Soil	MEDTTNPQAEQTPIPDDKSVRNELKEASQEFFRTLFQAGIHLAMTPVNMLPEEPREHFASAGREFTRGLATFAHELADNFDRLVDQSKEDVEKDS*
Ga0066665_116756371	3300006796	Soil	TQTTETPDTETPTPEEKSDRDELKEASQLFFRTLFQAGLNLAKTPVNMLPEESREHFVSAGREFTRGLATFAHELADNFDKIVDEVKEDVGKDQ*
Ga0066660_103028702	3300006800	Soil	MEDNSKEQAQQTYTTETPGSETPTPDEKSDRDELKEASQQFFRTLFQAGVHLARTSVNMLPEEPREHIVSAGREFTRGLATFAHELADNFDKIVDERKEDVRKDE*
Ga0073928_100996723	3300006893	Iron-Sulfur Acid Spring	MADPTKNQAEQPQTTDMPGVDAPASEEKTNFDELRESSQQFFRSLFRTGVQVAMTPVSMLPEEPRQHFLSAGREFTRGLATLAHELSNVFDRMAEETKEDAEKDQ*
Ga0099794_103407762	3300007265	Vadose Zone Soil	MVDTTNTQAEQTQTTEMPGTETPTPDEKSDRDELKEASQQFFRTLFQAGVHLAMTPVNMLPEEPREHFVSAGREFTRGLATLAHELADNFDKIVDEVKEDAG
Ga0102924_10800651	3300007982	Iron-Sulfur Acid Spring	NQAEQTQTTETPGVGAPASDEKLNRDELREASQQFFRALFRTGVHVAMTPVAMLPEEPRQHFLSAGREFTRGLATLAHELSNVFDKVAEEVKGDAEEDL*
Ga0102924_11486182	3300007982	Iron-Sulfur Acid Spring	MEDTTKKPAEQTQPTEMPDAGAPDKKSDRDELMEASQQFFRTLFRTGVHLAMTPVTMLPEEPREHFVTAGREFTRGLATLAQELAGVFDKMVDEVKESRDAATPGAPTTTDVPRTID*
Ga0066710_1005576572	3300009012	Grasslands Soil	MVDTTKMQAEQAQTTETPGTETPTPGEKSDRDELKQASQQFFRTLFRAGVHLAMAPVYMLPDEPREHFVSAGREFTRGLATLARELAVDFDKMVDEVKEELEKDK
Ga0066710_1028377702	3300009012	Grasslands Soil	MEDTTNPQAEQTQTTETPGTEIPTPDEKSDRDELKEASQQFFRTLLRAGVHMAMTPVSMLPEESREHFVSAGREFTRGLATFAHELADNFDKIVDEVKEDVGKDQ
Ga0066793_101030812	3300009029	Prmafrost Soil	FTMVIVYNKYGGKLMADTTKTQAEQAQTTEAPPTETPTPDEKSDRDELREASQQFFRTLFRAGVHLAMTPVYMLPAEPQEHFVSAGREFTRGLATLARELADDFEKMVDEVKKDVENH*
Ga0099829_101818732	3300009038	Vadose Zone Soil	MVDTTNTQAEQTQTTEMPGTETPTPDEKSDRDELKEASQQFFRTLFQAGVHLAMTPVNMLPEEPREHFVSAGREFTRGLATLAHELADNFDKIVDEVREDVGKD*
Ga0099830_104130242	3300009088	Vadose Zone Soil	MVDTTNTQAEQTQTTEMPGTETPTPDEKSDRDELKEASQQFFRTLFQAGVHLAMTPVNMLPEEPREHFVSAGREFTRGLATLAHELADNFDKIVDEVKEDAGKD*
Ga0099828_104109211	3300009089	Vadose Zone Soil	MVDTTNTQAEQTQTTEMPGTETPTPDEKSDRDELKEASQQFFRTLFQAGVHLAMTPVNMLPEESREHFVSAGREFTRGLATFAHELADNFDKIVDEVKEDVGKDE*
Ga0066709_1016514111	3300009137	Grasslands Soil	MQAEQAQTTETPGTETPTPDEKTDRDELKEASQQFFRTLFRAGVHLAMAPVYMLPDEPREHFVSAGREFTRGLATLARELAVDFDKMVDEVKEELEKDK*
Ga0066709_1034334101	3300009137	Grasslands Soil	TEMRGTETPTHEEKTDRDELKEASQQFFRTLLRAGVHMAMTPLSMLPEESREHFVSAGREFTRGLATFAHELADNFDKIVDEVKEDVGKDK*
Ga0127446_10138832	3300010104	Grasslands Soil	MQAEQAQTTETPGTETPTPDEKSDRDELKEASQQFFRTLFRAGVHLAMAPVYMLPDEPREHFVSAGREFTRGLATLARELAVDFDKMVDEVKEELEKDK*
Ga0126322_12114872	3300010143	Soil	MATTKKTQAEQAQDQENQAEQAATSSAGPDFKSDRDELKEASQQFFRTLFRTGVHLAMAPVYMLPEEPRDHFITAGREITRGLATLAHELADDFEKAVDQMREEVEKD*
Ga0126322_12810272	3300010143	Soil	MADTTNRQAGQAQTTAAPGSDAPAPEEKSDRDELIEASQQFFRTLFRTGVHMAMTPVTMLPEEPREHFVTAGREFTRGLAALAQEFAGVFDKMAQEVRESRDAATQDVPTSTDAPRTID*
Ga0127503_102930051	3300010154	Soil	MVDPTNTQAEQTETTETPGTETPTPDEKSDRDELKEASQQFFRTLLRAGVHMAMTPVSMLPEESREHFVSAGREFTRGLATFAHELADNFDKIVDEVKEDVGKDK*
Ga0127503_104256102	3300010154	Soil	MEDTTKEQAEQTHTAEPPGTQTPTPDEKSDRDELKEASQQFFRTLFQAGVHLAMTSVNMLPEEPREHFVSAGREFTRGLATFAHELADNFDKIVDEVKEDVGKDE*
Ga0134111_100723242	3300010329	Grasslands Soil	MVDTTKTQAEQAQTTETPGTETPTPDEKSDRDELKEASQQFFRTLFRAGVHLAMAPVYMLPDEPREHFVSAGREFTRGLATLARELAVDFDKMVDEVKEELEKDK*
Ga0134071_103837361	3300010336	Grasslands Soil	TTETPGTQTPTPDEKTDRDELKEASQQFFRTLFRAGVHLAMTPVSMLPEEPREHFVSAGREFTRGLATLAHELADNFDKIVDDVKADVEKDT*
Ga0136449_1004065972	3300010379	Peatlands Soil	MEDTTNPQAEQSHTAEMPDTQTPTPGEKSDRDELKDASQHFLRTLLRAGVHLAMAPASLLPEEPREHFASAGREFTRGLATLVHELADNFEKIIEEVNMAVKRDE*
Ga0136449_1012497751	3300010379	Peatlands Soil	PGSDTPTPEEKSDRDELKEASQQFFRTLFQAGAHLARTSVHMLPEESREHIVSAGREFTRGLATFAHELADNFDRIADEGKEDAGKDE*
Ga0136449_1014704282	3300010379	Peatlands Soil	MEDTTKEQAEQTHTTEMPGTEIPTPDEQSDRDELKEASQHFLRTLLRTGVHLAKAPASLLPEEPREHFASAGNEFNRGLACLAHELADTFEKIIEEVNMAVKQDK*
Ga0136449_1046852051	3300010379	Peatlands Soil	AEQTQTTETPGTETPTPEEKSDRDELKEASQQFFRTLFQAGVHLAMTPVNMLPEESREHFVSAGREFTRGLATFAHELADNFDKIVDEVKEDVGKDE*
Ga0137776_14414216	3300010937	Sediment	MADTTNKPVEQTQTTEPPGIEAPTPDNKSDRDELKEASQQFFRTLIRTGVHLAMTPVFMLPEEPQEHFVNAGREFTRGLSTLAHELADIFDKTVDEVKENIEKTNRRSGSWQ*
Ga0137392_100129743	3300011269	Vadose Zone Soil	MVDTTNTQAEQTQTTEMPGTETPTPDEKSDRDELKEASQQFFRTLFQAGVHLAMTPVNMLPEEPREHFVSAGREFTRGLAMLAHELADNFDKIVDEVKEDAGKD*
Ga0120139_11385062	3300012019	Permafrost	MIDPTKNQAEQKTEEVPGVEAPAFDERSNRDELMEASQQFFRALFRTGVHVAMTPVSMLPEESRQHFLSAGREFTRGLATMAHELSNAFDKMAEEVKEDVEKNK*
Ga0137364_109238241	3300012198	Vadose Zone Soil	MEDTSKEQAKQTPGSETPTPDEKSDRDELKEVSQQFFRTLFQAGVYLARTSVNMLPEEPREHIVSAGREFTRGLATFAHELADNFDKIVDERKEDLRKDE*
Ga0137383_100258674	3300012199	Vadose Zone Soil	MQAEQTQTTQTPGTQTPTPDEQSNRDELKEASQQFFHALFRAGVQLAMTPMSMLPEEPREHFVSAGREFTRGLATLAHELADNFDKIVDEVKADVEKDAMK*
Ga0137383_102249542	3300012199	Vadose Zone Soil	MEDTTKEQAEQTQTTETPGTETPTPDGKSDRDELKEASQEFFRTLFQAGVHLAMAPVNMLPEESREHFVSAGREFTRGLATFAHELADNFDKIVDEVKEDVGKDE*
Ga0137383_109728802	3300012199	Vadose Zone Soil	MTEQAEQAQTTQAPGTETPAPDEKSDRDELKEASQQFFRTLFRAGVHLAMTPVYMLPDEPREHFVSAGREFTRGLATLARELAVDFDKMVDEVKEELEKDK*
Ga0137365_100584622	3300012201	Vadose Zone Soil	MEDTTNPQAEQTPIPDEKSVRNELKEASQEFFRTLFQAGIHLAMTPVNMLPEEPREHFASAGREFTRGLATFAHELADNFDRLVDQSKEDVEKDS*
Ga0137365_101626942	3300012201	Vadose Zone Soil	MQAEQTQTTETPGTQTPTPDEKTDRDELKEASQQFFRTLFRAGVHLAMTPVSMLPEEPREHFVSAGREFTRGLATLAHELADNFDKIVDDVKADVEKDT*
Ga0137365_104840602	3300012201	Vadose Zone Soil	MTEQAEQAQTTQAPGTEIPAPDEKSDRDELKEASQQFFNTLFRVGVHLALTPVNILPEEPREHFTSAVSEFTRGLTTLARELADNIDKFVEEVKTDLEKDK*
Ga0137365_105745601	3300012201	Vadose Zone Soil	MVDTTKTQAEQAQTTETPGTETPTPDEKSDRDELKEASQQFFRTLFRAGVHLAMAPVYMLPDEPREHFVSAGREFTRGLATLARELAVDFDKMVDE
Ga0137365_106704192	3300012201	Vadose Zone Soil	MVDTTKTQAEQAQTTETPGTETPTPDEKTDRDELKEASQQFFRTLFRAGVHLAMTPVYMLPDEPREHFVSAGREFTRGLATLARELAVDFDKMVDE
Ga0137363_102702322	3300012202	Vadose Zone Soil	MVDTTNKQAEQTETTEMPGTETPTPDEKSDRDELKEASQQFFRTLFQAGVHLAMTPVNMLPEEPREHFVSAGREFTRGLATLAHELADNFDKIVDEVKEDAGKD*
Ga0137363_113479821	3300012202	Vadose Zone Soil	MQAEQTQTTQTPGTQTPTPDEQSNRDELKEASQQFFHALFRAGVQLAMTPMSMLPEEPREHFVSAGREFTRGLATLAHELADNFDK
Ga0137362_103741222	3300012205	Vadose Zone Soil	MQAEQTQTTEMPGTETPTPDEKSDRDELKEASQQFFHALFRAGVQLAMTPMSMLPEEPREHFVSAGREFTRGLATLAHELADNFDKIVDEVKADVEKDAMK*
Ga0137380_100003614	3300012206	Vadose Zone Soil	MVDTTKTQAEQAQTTETPGTETPTPDEKSDRDELKEASQQFFRTLFRAGVHLAMTPVYMLPDEPREHFVSAGREFTRGLATLARELAVDFDKMVDEVKEELEKDK*
Ga0137380_101414402	3300012206	Vadose Zone Soil	MEDTTNPQAEQTPIPDEKSVRNELKEASQEFFRTLFQAGIHLAMTPVNMLPEEPRKHFTSAGREFTRGLATFAHELADNFDRLVDQSKEDVEKDS*
Ga0137378_107875972	3300012210	Vadose Zone Soil	MVDTTKTQAEQAQTTETPGTETPTPDEKTDRDELKEASQQFFRTLFRAGVHLAMAPVYMLPDEPREHFVSAGREFTRGLATLARELAVDFDKMVDEVKEELEKDK*
Ga0137377_100960992	3300012211	Vadose Zone Soil	MEDTTNPQAEQTQTTEMPGTETPTPEEKTDRDELKEASQQFFRTLLRAGVHMAMTPVSMLPKESREHFVSAGREFTRGLATFAHELADNFDKIVDEVKEDVGKDK*
Ga0137377_100969752	3300012211	Vadose Zone Soil	MTEQAEQAQTTQAPGTETPAPDEKSDRDELKEASQQFFSTLFRVGVHLALTPVSLLPEEPREHFTSAVSEFTRGLTTLARELADNIDKFVEEVKTDLEKDK*
Ga0137377_101021312	3300012211	Vadose Zone Soil	MQAEQAKTTETPGTQTPTPEEKTDRDELKEASQQFFRTLFRVGVHLAMTPVSMLPEEPREHFASAGREFTRGLATLAHELADNFDKIVNEVKADVEKDL*
Ga0137377_119286142	3300012211	Vadose Zone Soil	KQGGKRMVDPTNMQAEQTQTTQTPGTQTPTPDEQSNRDELKEASQQFFHALFRAGVQLAMTPMSMLPEEPREHFVSAGREFTRGLATLAHELADNFDKIVDEVKADVEKDAMK*
Ga0137387_109977131	3300012349	Vadose Zone Soil	MAETKSKQADQTQTTETPETETPGAETSDYQADRDAILEASQQFVRSVFRAGVHLALAPVNLLPPEPREHFISAGREFTRGLTTLAHELADDFEKMVVEVKEEVKEDEVKE*
Ga0137366_105912642	3300012354	Vadose Zone Soil	MVDTKKTQRGQAQEQADTQTSSSSEAPDYKSDRDELKEASQQLFRALFRTGVHVAMAPVYMLPEEPRDHFITAGREITRGLATLAH
Ga0137371_102403782	3300012356	Vadose Zone Soil	MQAEQTQTTETPGTETPTPDGKSDRDELKEASQEFFRTLFQAGVHLAMAPVNMLPEESREHFVSAGREFTRGLATFAHELADNFDKIVDEVKEDVGKDE*
Ga0137371_106037331	3300012356	Vadose Zone Soil	MVDTTKTQAEQAQTTETPGTETPTPDEKTDRDELKEASQQFFRTLFRAGVHLAMTSVYMLSDEPREHFVSAGREFTRGLATLARELAVDFDKMVDEVKEEL
Ga0137371_106286091	3300012356	Vadose Zone Soil	MQAEQAQTTETPGTETPTPDEKSDRDELKEASQQFFRTLFRAGVHLAMAPVYMLPDEPREHFVSAGREFTRGLATLARELAVDFDKMVDEVKEEL
Ga0137371_110750452	3300012356	Vadose Zone Soil	ADTRTEQAEQAQTTQAPGTEIHAPDEKSDRDELKEASQQFFSTLFRVGVHLALTPVNMLPEEPREHFTSAVSEFTRGLTTLARELADNVDKFVEEVNMNVKKDS*
Ga0137385_101656035	3300012359	Vadose Zone Soil	MQAEQAQTTETPGTETPTPDEKSDRDELKEASQQFFRTLFRAGVHLAMTPVYMLPDEPREHFVSAGREFTRGLATLARELAVDFDKMVDEVKEELEKDK*
Ga0134046_11254171	3300012386	Grasslands Soil	MQAEQAQTTETPGTETPTPDEKSDRDELKEASQQFFRTLFRAGVHLAMAPVYMQPDEPREHFVSAGREFTRGLATLARELAVDFDKMVDEVKEELEKDK*
Ga0134051_12994862	3300012398	Grasslands Soil	QAEQAQTTETPGTETPTPDEKSDRDELKEASQQFFRTLFRAGVHLAMAPVYMLPDEPREHFVSAGREFTRGLATLARELAVDFDKMVDEVKEELEKDK*
Ga0134076_100428071	3300012976	Grasslands Soil	MVDTTKTQAEQAQTTETPGTETLTPDEKSDRDELKEASQQFFRTLFRAGVHLAMTPVYMLPDEPREHFVSAGREFTRGLATLARELAVDFDKMVDEVKEELEKDK*
Ga0120125_11753751	3300014056	Permafrost	MIDPTKNQAEQTTGTPGVESPASDEKSNRDELMEASQQFFRALFRTGVHVAMTPASMLPEESRQHFLSAGREFTRGLATMAHELSNAFDKMAEEVKEDVEKNK*
Ga0134072_102907422	3300015357	Grasslands Soil	TPTPDEKSDRDELKEASQQFFRTLFQAGVHLARTSVNMLPEEPREHIVRAGHEFTHGLATFAHELADNFDKIVDERKEDVRKDE*
Ga0132256_1032432991	3300015372	Arabidopsis Rhizosphere	QAEQTQTTQTPGTQTPTPDEQSDRDELKEASQQFFRTLFRAGVQLAMTPVSMLPEEPREHFVSAGREFTRGLATLAHELADNFDKIVNEVKADVEKDL*
Ga0187812_10268673	3300017821	Freshwater Sediment	MENTTKEQAERAHTAETPGSETPTPEEKSDRDELKEASQHFFRTLFQAGAHLARTSVTMLPEESREHIVSAGREFTRGLATLAHELADNFEKIADERKEDVRKDE
Ga0187803_102164851	3300017934	Freshwater Sediment	MVDPTNMQAEQTQTTETPGTQTPTPDEKTDRDELKEASQQFFHTLFRAGVHLAMTPVSKLPEEPREHFVSAGREFTRGLATLAHELADNFDKIVDEIKADAEKDT
Ga0187775_101755541	3300017939	Tropical Peatland	MVDTTKMQAEQAQTTETPGTETPTPDEKTDRDELKEASQQFFRTLFRAGVHLAMTPVYMLPDEPREHFVSAGREFTRGLATLARELADDFDKMVDEVKEELEKDK
Ga0187808_101569702	3300017942	Freshwater Sediment	ETPTPEEKSDRDELKEASQQFFRTLFQAGINLARTPVNMLPEESREHFVSAGREFTRGLATFAHELADNFDTLVDEVKEDVGKDE
Ga0187817_108693851	3300017955	Freshwater Sediment	MEDTTKGQAEQAHTTETSGSETPTPEEKSDRDELKEASQQFFRTLFQAGAHLARTSVNMLPGESREHIVSAGREFTRGLAKFAHELADNFDRMADEGKEDAGKDE
Ga0187776_105378592	3300017966	Tropical Peatland	MVDPTKMQAEQTQTTDTPGTQTPTPDEKTDRDELKEASQQFFRTLFRAGVHLAMTPVSKLPEEPREHFVSAGREFTRGLATLARELADDFDKIVDEVKADVEKDS
Ga0066662_126225581	3300018468	Grasslands Soil	MEDTTKEQAEQTHTAETPGNETPTPGEKSDRDELKEASQQFFRTLFQAGVHLARTSVNMLPEEPREHIVSAGREFTRGLATFAHELADNFDKIVDEVKEDVGKDK
Ga0066662_129946391	3300018468	Grasslands Soil	MADPTNSQAEQPGTTDMPDVDATASEEKTNFDELRESSQQFFRSLFRTGVQVAMTPVSMLPQEPRQHFLSAGREFSRGLATLAHELSNAFDRMAEEAKEKVDENQE
Ga0210399_100976571	3300020581	Soil	MVDTTNTQAEQTQTTEMPGTETPTPDEKSDRDELKEASQQFFRTLFQAGVHLAMTPVNMLPEEPREHFVSAGREFTRGLATLAHELADNFDKIVDEVKEDAGKD
Ga0210404_100320491	3300021088	Soil	MVDTTNTQAEQTQTTEMPGTETPTPDEKSDRDELKEASQQFFRTLFQAGVHLAMTPVNMLPEEPREHFVSAGREFTRGLATLAHELADNFD
Ga0210408_113614272	3300021178	Soil	QAEQTQTTEMPGTETPTPDEKSDRDELKEASQQFFRTLFQAGIHLAMTPVNMLPEEPREHFVSAGREFTRGLATLAHELADNFDKIVDEVKEDAGKD
Ga0213875_101787321	3300021388	Plant Roots	MVDPTKNQAEQPQTTEMPGVDAPVSEEKTNFDELRESSQQFFRSLVRTGVQVAMTPVSMLPQEPRQHFLSAGREFSRGLATLAHELSNVF
Ga0210402_111353911	3300021478	Soil	MEDNTKDQADQTQTIGTSGTETPTPEGKSDRDELKEASQQFFRTIFQAGKNLARTPVNMLPEESREHFVSAGRELTRGLATLAHELADNFDKLVDEVKEDVGKDEKRPFL
Ga0210409_105736571	3300021559	Soil	MVDTTNTQAEQTQTTEMPGTETPTPDEKSDRDELKEASQQFFRTLFQAGVHLALTPVNMLPEEPREHFVSAGREFTRGLATLAHELADNFDKIVDEVKEDARKD
Ga0210409_109461051	3300021559	Soil	MADPTKNQAEQTQTTEMPGAEASGEKSNLDELRESYQQFFRALFRTGVQVAMTPVSMLPDESRQHFLSAGREFTRGLATLAHELSNVFDKMAEEVKEDEEKDL
Ga0213851_10583001	3300021860	Watersheds	KHGGKLMADTTKTQAGQAQTMETPATETPTPEEKSDRDELMEASQQFFRTLLRAGVHLAMTPVYLLPQEPQEHFVSAGREFTRGLATLARELADDFEKMVDEVKKDVENH
Ga0242656_10928691	3300022525	Soil	DTTNMQAEQAKTTETPGTQTPTPEEKTDRDELKEASQQFFRTLFRAGVHLAMTPVSMLPEEPREHFVSAGREFTRGLSTLAQEIADDFDKLVKRDKEEAGE
Ga0212123_1001240010	3300022557	Iron-Sulfur Acid Spring	MADETRNQAEQTQTTETPGVGAPASDEKLNRDELREASQQFFRALFRTGVHVAMTPVAMLPEEPRQHFLSAGREFTRGLATLAHELSNVFDKVAEEVKGDAEEDL
Ga0207684_100165768	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MVDPTNLQAEQTQTTEMPGTDTPTPDEKFERNVLKEVSQQFFRTLFRSGVHLVMTPVSLLPEEPREHFVSAGREFTRGLATIAHELAGNFDKIVDEVKTDGEKD
Ga0209237_10681883	3300026297	Grasslands Soil	MVDTTKTQAEQAQTPETPGTETPTPDEKTDRDELKEASQQFFRTLFRAGVHLAMTPVYMLPDEPREHFVSAGREFTRGLATLARELAVDFDKMVDEVKEELEKDK
Ga0209266_100390110	3300026327	Soil	MVDTTKMQAEQAQTTETPGTETPTPDEKSDRDELKEASQQFFRTLFRAGVHLAMAPVYMLPDEPREHFVSAGREFTRGLATLARELAVDFDKMVDEVKEELEKDK
Ga0209056_101022552	3300026538	Soil	MEDTTNPQAEQTPIPDDKSVRNELKEASQEFFRTLFQAGIHLAMTPVNMLPEEPREHFASAGREFTRGLATFAHELADNFDRLVDQSKEDVEKDS
Ga0208841_1018351	3300026721	Soil	MVDTTNTQAEQTQTTEMPGTETPTPDEKSDRDELKEASQQFFRTLFQAGVHLARTSVNMLPEEPREHIVSAGREFTRGLATFAHEIADNFEK
Ga0208575_10049762	3300026920	Soil	MVDTTNTQAEQTQTTEMPGTQTPTPDEKSDRDELKEASQQFFRTLFQAGVHLAMTPVNMLPEEPREHFVSAGREFTRGLATLAHELADNFDKIVDEVKEDAGKD
Ga0208890_10631681	3300027523	Soil	MVDTTKMQAEQAQTTETPGTETPTPDEKSDRDELKEASQQFFRTLFRAGVHLAMTPVSMLPEEPREHFVSAGREFTRGLATLARELADDFDKMVDEVKEELEKGK
Ga0209736_11671811	3300027660	Forest Soil	DPTKNQAEQTTGTPDVESPASDEKSNRDELMEASQQFFRALFRTGVHVAMTPVSMLPEESRQHFLSAGREFTRGLATMAHQLSNAFDKMAEEVKEDVEKDK
Ga0209009_10049133	3300027667	Forest Soil	MVDTTNTQAEQTQTTEMPGIQTPTPDEKSDRDELKEASQQFFRTLFQAGVHLAMTPVNMLPEEPREHFVSAGREFTRGLATLAHELADNFDKIVDEVKEDAGKD
Ga0209039_101028742	3300027825	Bog Forest Soil	MADTKNKQEEQAQTQTTETPGMETPIPDYKSDRDELKEASQQFFRTLFRAGVHVAMAPVYMLPEEPRDHFVTAGREITRGLATLAHELADDFEKAVEQMREEVEED
Ga0209180_101323312	3300027846	Vadose Zone Soil	MVDTTNTQAEQTQTTEMPGTETPTPDEKSDRDELKEASQQFFRTLFQAGVHLAMTPVNMLPEEPREHFVSAGREFTRGLATLAHELADNFDKIVDEVKEDVGKDE
Ga0209166_100282573	3300027857	Surface Soil	MTDPTKKQAEQTQATETPVVDTPTSDAPASEEKTNFDELRESSQQFFRSLVRTGVQVAMTPVSMLPQEPRQHFLSAGREFSRGLATLAHELSNVFDRLAEEAKEKVEGDQEQDL
Ga0209701_106185001	3300027862	Vadose Zone Soil	MVDTTNTQAEQTQTTEMPGTETPTPDEKSDRDELKEASQQFFRTLFQAGVHLAMTPVNMLPEEPREHFVSAGREFTRGLSTLAQEIADDFDKLVKRDKEEAGE
Ga0209069_100676861	3300027915	Watersheds	RMENTTKEQAEQTHTAEKPGTETPTPDEKSDRDELKEASQYLFRTLFQAGVHLAMTPVNMLPEEPREHFVSAGREFTRGLATLAHELADNFDKIVDEVKEDVGKD
Ga0222749_100803782	3300029636	Soil	MADPTKNQAEQTQTTEMPGAEASGEKSNLDELRESSQQFFRALFRTGVQVAMTPVSMLPDESRQHFLSAGREFTRGLATLAHELSNVFDKMAEEVKEDEEKDL
Ga0307477_110882311	3300031753	Hardwood Forest Soil	MAEPTKKQAAQDQPMETPIVDTPTVDAPASEEKTNFDELRESSQQFFRALFRTGVQVAMTPVSMLPEEPRQHFLSAGREFTRGLATLAHELSNVFDRM
Ga0311301_122861611	3300032160	Peatlands Soil	GTLMEDTMNMQAEQTHTTEMPGTEIPTPDEQSDRDELKEASQHFLRTLLRTGVHLAKAPASLLPEEPREHFASAGNEFNRGLACLAHELADTFEKIIEEVNMAVKQDK
Ga0307472_1008564212	3300032205	Hardwood Forest Soil	MVDPTNTQAEQTETTETPGTETPTPDEKSDRDELKEASQQFFRTLLRAGVHMAMTPVSMLPEESREHFVSAGREFTRGLATFAHELADNFDKIVDEVKEDVGKDK
Ga0326726_110731273	3300033433	Peat Soil	MVDTTNTKMQAEQAQTTETPGTETPTPDEKSDRDELKEASQQFFRTLFRAGVHLAMTPVYMLPDEPREHFVSAGREFTRGLATLARELADDFDKMVDEVKEELEKDK
Ga0326723_0167762_142_429	3300034090	Peat Soil	MEDTTNPQAEQTPIPDEKSDRDKLKEASQQFFRTLFQAGAHLAMTPVKMLPEEPREHFVSAGREFTRGLATLAHELADNFDRLVDESKEDVGKDE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070498

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences