Metagenome Family F070481

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070481
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	48 residues
Representative Sequence	RGFKPKDAAEIAAREIMFENDHDPDIARKVQIEAQDFLRRVKEG
Number of Associated Samples	93
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	43.90 %
% of genes near scaffold ends (potentially truncated)	55.28 %
% of genes from short scaffolds (< 2000 bps)	91.06 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.553 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (36.585 % of family members)
Environment Ontology (ENVO)	Unclassified (62.602 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 75.00% β-sheet: 0.00% Coil/Unstructured: 25.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF00589	Phage_integrase	9.76
PF00196	GerE	5.69
PF01740	STAS	5.69
PF05977	MFS_3	1.63
PF04134	DCC1-like	1.63
PF00069	Pkinase	1.63
PF04095	NAPRTase	1.63
PF13185	GAF_2	1.63
PF13365	Trypsin_2	0.81
PF01068	DNA_ligase_A_M	0.81
PF08241	Methyltransf_11	0.81
PF13649	Methyltransf_25	0.81
PF00999	Na_H_Exchanger	0.81
PF00076	RRM_1	0.81
PF13414	TPR_11	0.81
PF00248	Aldo_ket_red	0.81
PF13701	DDE_Tnp_1_4	0.81
PF00293	NUDIX	0.81
PF13088	BNR_2	0.81
PF02562	PhoH	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	6.50
COG1488	Nicotinic acid phosphoribosyltransferase	Coenzyme transport and metabolism [H]	1.63
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	1.63
COG3011	Predicted thiol-disulfide oxidoreductase YuxK, DCC family	General function prediction only [R]	1.63
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.81
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.81
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.81
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	0.81
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.81
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	0.81
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.81
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.81
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.55 %
Unclassified	root	N/A	15.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.55 %
Unclassified	root	N/A	15.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.55 %
Unclassified	root	N/A	15.45 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	65.04 %
Unclassified	root	N/A	15.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.44 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.63 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	56.91 %
Unclassified	root	N/A	15.45 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.63 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	56.91 %
Unclassified	root	N/A	15.45 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.63 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.63 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	56.91 %
Unclassified	root	N/A	15.45 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.63 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	56.91 %
Unclassified	root	N/A	15.45 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.63 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10045068	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1843	Open in IMG/M
3300002560\|JGI25383J37093_10033328	Not Available	1715	Open in IMG/M
3300002561\|JGI25384J37096_10232541	Not Available	539	Open in IMG/M
3300002908\|JGI25382J43887_10149385	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300002916\|JGI25389J43894_1048344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300005167\|Ga0066672_10326335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1000	Open in IMG/M
3300005171\|Ga0066677_10099830	Not Available	1535	Open in IMG/M
3300005174\|Ga0066680_10060073	Not Available	2255	Open in IMG/M
3300005174\|Ga0066680_10387805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	888	Open in IMG/M
3300005174\|Ga0066680_10700970	Not Available	621	Open in IMG/M
3300005180\|Ga0066685_10962522	Not Available	566	Open in IMG/M
3300005186\|Ga0066676_10061105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2179	Open in IMG/M
3300005187\|Ga0066675_10660269	Not Available	785	Open in IMG/M
3300005446\|Ga0066686_10433355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300005446\|Ga0066686_10529264	All Organisms → cellular organisms → Bacteria → Acidobacteria	801	Open in IMG/M
3300005446\|Ga0066686_11013162	Not Available	538	Open in IMG/M
3300005451\|Ga0066681_10272688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1030	Open in IMG/M
3300005454\|Ga0066687_10055950	All Organisms → cellular organisms → Bacteria → Acidobacteria	1858	Open in IMG/M
3300005536\|Ga0070697_100150574	All Organisms → cellular organisms → Bacteria	1961	Open in IMG/M
3300005536\|Ga0070697_100447762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1125	Open in IMG/M
3300005536\|Ga0070697_101015329	All Organisms → cellular organisms → Bacteria → Acidobacteria	737	Open in IMG/M
3300005552\|Ga0066701_10006085	All Organisms → cellular organisms → Bacteria	5084	Open in IMG/M
3300005553\|Ga0066695_10050555	All Organisms → cellular organisms → Bacteria	2469	Open in IMG/M
3300005554\|Ga0066661_10747718	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300005556\|Ga0066707_10096800	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1806	Open in IMG/M
3300005556\|Ga0066707_10104390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1745	Open in IMG/M
3300005556\|Ga0066707_10126940	All Organisms → cellular organisms → Bacteria	1595	Open in IMG/M
3300005558\|Ga0066698_10278091	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300005558\|Ga0066698_10963238	Not Available	543	Open in IMG/M
3300005560\|Ga0066670_10377807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	866	Open in IMG/M
3300005568\|Ga0066703_10094710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1747	Open in IMG/M
3300005569\|Ga0066705_10257090	All Organisms → cellular organisms → Bacteria → Acidobacteria	1107	Open in IMG/M
3300005575\|Ga0066702_10601215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300005586\|Ga0066691_10120989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1486	Open in IMG/M
3300006173\|Ga0070716_100802250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300006791\|Ga0066653_10408133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300006791\|Ga0066653_10610731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300006796\|Ga0066665_10793761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	747	Open in IMG/M
3300006796\|Ga0066665_11482033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300006800\|Ga0066660_10845445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300006903\|Ga0075426_10247832	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1297	Open in IMG/M
3300009012\|Ga0066710_100041914	All Organisms → cellular organisms → Bacteria → Proteobacteria	5536	Open in IMG/M
3300009038\|Ga0099829_10431740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1090	Open in IMG/M
3300009038\|Ga0099829_11748095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300009088\|Ga0099830_11629856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300009137\|Ga0066709_102937528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300009137\|Ga0066709_103177597	Not Available	599	Open in IMG/M
3300010048\|Ga0126373_11022350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M
3300010303\|Ga0134082_10343282	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300010304\|Ga0134088_10334986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300010326\|Ga0134065_10223831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300010329\|Ga0134111_10061251	All Organisms → cellular organisms → Bacteria → Acidobacteria	1386	Open in IMG/M
3300010329\|Ga0134111_10448725	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300010333\|Ga0134080_10141633	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1014	Open in IMG/M
3300010335\|Ga0134063_10061869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1653	Open in IMG/M
3300010335\|Ga0134063_10085464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1418	Open in IMG/M
3300010335\|Ga0134063_10375584	Not Available	694	Open in IMG/M
3300010336\|Ga0134071_10455457	Not Available	656	Open in IMG/M
3300010358\|Ga0126370_12063078	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300010398\|Ga0126383_12120460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300011270\|Ga0137391_10685352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300012096\|Ga0137389_11545304	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300012198\|Ga0137364_10273891	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1250	Open in IMG/M
3300012198\|Ga0137364_10283485	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1228	Open in IMG/M
3300012198\|Ga0137364_10975706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300012198\|Ga0137364_11013060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300012200\|Ga0137382_10142831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1617	Open in IMG/M
3300012202\|Ga0137363_10927170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300012205\|Ga0137362_11151506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300012205\|Ga0137362_11390004	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300012206\|Ga0137380_10214337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1743	Open in IMG/M
3300012206\|Ga0137380_10625892	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300012207\|Ga0137381_10427687	All Organisms → cellular organisms → Bacteria → Acidobacteria	1156	Open in IMG/M
3300012208\|Ga0137376_10090683	All Organisms → cellular organisms → Bacteria	2577	Open in IMG/M
3300012209\|Ga0137379_10246636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1699	Open in IMG/M
3300012209\|Ga0137379_11098589	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	701	Open in IMG/M
3300012210\|Ga0137378_10757352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	883	Open in IMG/M
3300012211\|Ga0137377_10291515	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1566	Open in IMG/M
3300012211\|Ga0137377_10864248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	837	Open in IMG/M
3300012285\|Ga0137370_10382520	Not Available	851	Open in IMG/M
3300012351\|Ga0137386_10422675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	960	Open in IMG/M
3300012354\|Ga0137366_10820826	All Organisms → cellular organisms → Bacteria → Acidobacteria	659	Open in IMG/M
3300012357\|Ga0137384_10228112	All Organisms → cellular organisms → Bacteria	1556	Open in IMG/M
3300012357\|Ga0137384_10949225	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300012362\|Ga0137361_10993278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300012975\|Ga0134110_10557400	Not Available	527	Open in IMG/M
3300012976\|Ga0134076_10408458	Not Available	606	Open in IMG/M
3300014150\|Ga0134081_10314887	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300014154\|Ga0134075_10548921	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300014157\|Ga0134078_10217842	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300014157\|Ga0134078_10659046	Not Available	508	Open in IMG/M
3300015264\|Ga0137403_10028311	All Organisms → cellular organisms → Bacteria	5947	Open in IMG/M
3300015356\|Ga0134073_10378787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300015357\|Ga0134072_10132191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300015359\|Ga0134085_10161287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	954	Open in IMG/M
3300017656\|Ga0134112_10464374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300017659\|Ga0134083_10029818	All Organisms → cellular organisms → Bacteria	1981	Open in IMG/M
3300018431\|Ga0066655_10220146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1189	Open in IMG/M
3300018482\|Ga0066669_11944601	Not Available	549	Open in IMG/M
3300025910\|Ga0207684_10201047	All Organisms → cellular organisms → Bacteria	1719	Open in IMG/M
3300025922\|Ga0207646_11875550	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300026277\|Ga0209350_1020186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2057	Open in IMG/M
3300026313\|Ga0209761_1266227	Not Available	634	Open in IMG/M
3300026324\|Ga0209470_1066058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1693	Open in IMG/M
3300026324\|Ga0209470_1175232	All Organisms → cellular organisms → Bacteria → Acidobacteria	930	Open in IMG/M
3300026331\|Ga0209267_1179495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300026331\|Ga0209267_1311128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300026342\|Ga0209057_1031799	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2756	Open in IMG/M
3300026342\|Ga0209057_1056211	All Organisms → cellular organisms → Bacteria	1814	Open in IMG/M
3300026524\|Ga0209690_1075901	Not Available	1425	Open in IMG/M
3300026527\|Ga0209059_1235427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300026528\|Ga0209378_1067343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1661	Open in IMG/M
3300026532\|Ga0209160_1027650	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3636	Open in IMG/M
3300026532\|Ga0209160_1117256	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1316	Open in IMG/M
3300026537\|Ga0209157_1082527	All Organisms → cellular organisms → Bacteria → Acidobacteria	1573	Open in IMG/M
3300026538\|Ga0209056_10065057	All Organisms → cellular organisms → Bacteria	3163	Open in IMG/M
3300026552\|Ga0209577_10359617	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300027748\|Ga0209689_1172095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	995	Open in IMG/M
3300027846\|Ga0209180_10299138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	922	Open in IMG/M
3300027862\|Ga0209701_10280228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	965	Open in IMG/M
3300027862\|Ga0209701_10299021	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	925	Open in IMG/M
3300027882\|Ga0209590_10300967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1030	Open in IMG/M
3300032205\|Ga0307472_102370750	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.19%
Host-Associated	Host-Associated	0.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.19%
Plants	Host-Associated → Plants	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	92.68%
Loam	Environmental → Terrestrial → Soil → Loam	6.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.34%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	45.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	36.59%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	26.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	17.07%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.44%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.81%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_100450682	3300001867	Forest Soil	MQGFKPKDAAEIAMQEIIFENRSDSKVADRVKTEAEDFLRRVKSGLI*
JGI25383J37093_100333284	3300002560	Grasslands Soil	INRAKGLVMRGFKPKDAAEIAAREIMFENDHDPDIARKVQIEAQDFLRRVKEG*
JGI25384J37096_102325412	3300002561	Grasslands Soil	GFKPKDAADITAREIMFENHDDPDIARKVQIEAQGFLRRVKEGLI*
JGI25382J43887_101493852	3300002908	Grasslands Soil	MRGFKPKDAAEITMQEIIFEFRDDPDIARRVQIEAKDFLQRVKEGLI*
JGI25389J43894_10483442	3300002916	Grasslands Soil	VKRGFKPKDAADITAREIMFENHDDPDIARKVQIEAQGFLRRVKEGLI*
Ga0066672_103263351	3300005167	Soil	MRGFKPKDAAEIAAREIMFENDHDPDIASKVQIEAQDFMRRVKEG*
Ga0066677_100998303	3300005171	Soil	AAEITAKEIMFENHDDPDIARKVQIEVNDFLRRVKEGLI*
Ga0066680_100600732	3300005174	Soil	MRGIKPKEAAEIAAREIMFENHDDPDIARKVQIEVNDFLRRSEGKG*
Ga0066680_103878053	3300005174	Soil	GFKPKDAAEIAAREIMFENDHDPDIARKVQIEVNDFLRRVKEG*
Ga0066680_107009701	3300005174	Soil	LVMRGFKPKDAAEIAAREIMFENDHDPDIARKVQIEAQDFMRRVKKGLI*
Ga0066685_109625221	3300005180	Soil	MVARDGVGFKPKDAAEITAKEIMFENHDDPDIARKVQIEVNDFLRRV
Ga0066676_100611053	3300005186	Soil	AAEIAAREIMFENDHDPDIARKVQREAQDFLRRVKEGLI*
Ga0066675_106602691	3300005187	Soil	RAKGLVKRGFKPKDAAEIAASEIMFEKHDDPDIARKVQIEVNDFLRRLKEGLI*
Ga0066686_104333552	3300005446	Soil	MRGFKPKDAAEIAVREIIFENRDDPGIARKVQIEAQDFLRRVKEGLI*
Ga0066686_105292641	3300005446	Soil	MVARDGVGFKPKDAAEITAKEIMFENHDDPDIARKVQIEVNDFLRRVKEGLI*GCPR
Ga0066686_110131621	3300005446	Soil	LVMRGFKPKDAAEIAAREIMFENDHDPDIASKVQIEAQDFMRRVKEG*
Ga0066681_102726881	3300005451	Soil	MRGFKPKDAAEIAAREIMFENDHDPDIASKVQIEAQDFMRRVKKGLI*
Ga0066687_100559501	3300005454	Soil	RAKGLVMRGFKPKDAAEITAKEIMFENHDDPDIARKVQIEVNDFLRRVKEGLI*
Ga0070697_1001505742	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRGFKPKDAAEIAARDIMFENDHDPDIARKVQIEAQDFLRRVKEG*
Ga0070697_1004477622	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRGFKPKEAAEIAAREIMFENDHDPDIARKVQIEVNDFLRRVKG*
Ga0070697_1010153291	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	TPKDAAEIAAREIMFENDHDPDIARKVQREAQDFLRRVKEGLI*
Ga0066701_100060851	3300005552	Soil	MRGIKPKEAAEIAASEIMFEKHDDPDIARKVQIEVNDFLRRVKEGLI*
Ga0066695_100505551	3300005553	Soil	GFKPKDAAEITAKEIMFENHDDPDIARKVQIEVNDFLRRVKEGLI*
Ga0066661_107477182	3300005554	Soil	SFIARAKGLVKRGFKPKDAAEIAAREIMFENHDDPDIARKVQIEAQDFPRRVKEVRWPR*
Ga0066707_100968001	3300005556	Soil	VRRGFKPKDAAEIAAREIMFENDHDADIARKVQIEVNDFLRRVKEG*
Ga0066707_101043903	3300005556	Soil	LVMRGFKPKDAAEIASKEIMFENDHDPDIARKVRIEAKDFLNRVKET*
Ga0066707_101269402	3300005556	Soil	ARAKGLVMRGFKPEDAAEIVSREIMFENHDDPDIARKVQIEVNDFLRRLKRG*
Ga0066698_102780911	3300005558	Soil	PENFIARAKGLVMRGLKPKDAAEIAAREIMFENDHDPDIARKVQREAQDFLRRVKEGLI*
Ga0066698_109632381	3300005558	Soil	PENFIARAKGLVMRGLKPKDAAEIAAREIMFENDHDPDIASKVQIEAQHFLRRVKKGLI*
Ga0066670_103778073	3300005560	Soil	AAEIAAREIMFENDHDPDIARKVQIEAQDFLRRVKEGDLS*
Ga0066703_100947102	3300005568	Soil	MLGFKPKDAAEIAAREIMFENDHDPDIASKVQIEAQDFMRRVKEG*
Ga0066705_102570902	3300005569	Soil	PKDAAEIAAREIMFENDHDPDIARKVQIEAQDFMRRVKEGVI*
Ga0066702_106012151	3300005575	Soil	AKGLVMRGFKPKDAAEIAAREIMFENDHDPDIARKVQIEAQDFLRRVKEG*
Ga0066691_101209893	3300005586	Soil	MRGFKPKDAAEIAASEIMFENHDDPDIARKVQIEVNDFLRRLKEGLI*
Ga0070716_1008022502	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VKRGFKPKDAAEIAAKEIMFEKHNDPDIARKVQIEAQDFLRRVKEGLV*
Ga0066653_104081332	3300006791	Soil	FIARTKGLVMRGFEPKDAAEIAAREIMFENDHDPDIASKVQIEAQHFLRRVKKGLI*
Ga0066653_106107311	3300006791	Soil	MMVARDGVGFKPKDAAEITAKEIMFENHDDPDIARKVQIEVNDFLRRVKEGLI*
Ga0066665_107937611	3300006796	Soil	MRGFKPKDAAEIAAREIMFENDHDPDIARKVQIEAQDFMRRVKKGLI*
Ga0066665_114820331	3300006796	Soil	VKRGFKPKDAAEIAAREIMFEKHDDPDIARKVQIEAQGFLRRVKEGLI*
Ga0066660_108454452	3300006800	Soil	MRGFKPEDAAEIVSREIMFENDHDPDIARKVRIEAKDFLNRVKET*
Ga0075426_102478321	3300006903	Populus Rhizosphere	DSFIARATGLVKRGFKPKDAAEIAASELMFEKHDDPDIARKVQIEAQGFLRRVKEGLI*
Ga0066710_1000419146	3300009012	Grasslands Soil	MMVARDGVGFKPKDAAEITAKEIMFENHDDPDIARKVQIEVNDFLRRVK
Ga0099829_104317401	3300009038	Vadose Zone Soil	MRGFKPKDAAEIAAREIMFENHDDPDIAGKVQIEVNDFLRRVKEGLI*
Ga0099829_117480951	3300009038	Vadose Zone Soil	MRGFKPKDAAEITVREIIFENRDDPDIARRVQIEAKDFLQRVKEGLI*
Ga0099830_116298561	3300009088	Vadose Zone Soil	PESFINRAKGLVMRGFKPKDAAEIAAREIMFENDHDPDIARKVQIEVNDFLRRVKEGLT*
Ga0066709_1029375281	3300009137	Grasslands Soil	VMRGFKPKDAAEIAAREIMFENDHDPDIARKVQIEVNDFLRRVKEG*
Ga0066709_1031775972	3300009137	Grasslands Soil	VMRGFAPKDAAEIAAREIMFENDHDPDIARKVQREAQDFLRRVKEGLI*
Ga0126373_110223501	3300010048	Tropical Forest Soil	SLISRAKGLVMRGFKPKDAAEIAAKEIMFENHDDPDIARKVQIEAQDFLRRVKEGSI*
Ga0134082_103432823	3300010303	Grasslands Soil	GFKPKDAAEIAAREIMFENDHDPDIARKVQIEAQDFLRRVKEGDLS*
Ga0134088_103349862	3300010304	Grasslands Soil	MRGFKPKDAAEIAAREIMFENDHDPDIASKVQIEAQDFMHRVKKGLI*
Ga0134065_102238312	3300010326	Grasslands Soil	MRGLKPKDAAEIAAREIMFENDHDPDIARKVQREAQDFLRRVKEGLI*
Ga0134111_100612513	3300010329	Grasslands Soil	MMVARDGVGFKPKDAAEITAKEIMFENHDEPDIARKVQIEVNDFLRRVKEG*
Ga0134111_104487251	3300010329	Grasslands Soil	MRGFKPKDAAEIAAREIMFENDHDPDIARKVQREAQDFLRRVKEGLI*
Ga0134080_101416332	3300010333	Grasslands Soil	MRGFEPKDAAEIAAREIMFENDHDPDIARKVQIEAQDFLRRVKE
Ga0134063_100618692	3300010335	Grasslands Soil	VVLSPKDAAEIAAREIMFENDHDPDIARKVQIEAQDFLRRVKEG*
Ga0134063_100854642	3300010335	Grasslands Soil	VPLDLDSFINRAKGLVMRGFKPKDAAEIAAREIMFENDHDPDIASKVQIEAQDFMRRVKEG*
Ga0134063_103755842	3300010335	Grasslands Soil	MRGLKPKDAAEIAAREIMFENDHDPDIASKVQIEAQDFLRRVKEG*
Ga0134071_104554571	3300010336	Grasslands Soil	RGFKPKDAAEIAASEIMFEKHDDPDIARKVQIEVNDFLRRLKEGLI*
Ga0126370_120630781	3300010358	Tropical Forest Soil	FIVHARGLIRRGFKPKDAAEITVQEIIFESRDDPDITRKVQMAAQDFLRRVKEGLI*
Ga0126383_121204602	3300010398	Tropical Forest Soil	GFKPKDAAEIAAKEIMFENHDDPDIARKVQIEAQDFLRRVKEGSI*
Ga0137391_106853521	3300011270	Vadose Zone Soil	MRGFKPKDAAEIAAREIMFENDHDPDIARKVQIEVNDFLRRVKEG*
Ga0137389_115453041	3300012096	Vadose Zone Soil	APENFIARAKGLVMRGFKPKDAAEIAAREIMFENDHDPDIASKVQIEAQHFLRRVKEG*
Ga0137364_102738912	3300012198	Vadose Zone Soil	MRGFKPKDAAEIAAREIMFENDHDPDIASKVQIEAQHFLRRVKEG*
Ga0137364_102834853	3300012198	Vadose Zone Soil	KGLVMRGFKPKDAAEIASREIMLENDHDPDIARKVQIEALDFLRRVKEG*
Ga0137364_109757061	3300012198	Vadose Zone Soil	MRGLKPKDAAEIAAREIMFENDHDPDIARKVQREAQDFLRRVKEG*
Ga0137364_110130601	3300012198	Vadose Zone Soil	VTRGFKPKDAAEIAAREIMFENHDDPDIARKVQIEVNDFLR
Ga0137382_101428312	3300012200	Vadose Zone Soil	MRGFEPKDAAEIAAREIMFENDHDPDIARKVQIEAQDFLRRVKEG*
Ga0137363_109271702	3300012202	Vadose Zone Soil	MRGFKPKDAAEIAAREIMFENQDDPDIARKVQIEVNDFLRRSE
Ga0137362_111515062	3300012205	Vadose Zone Soil	MRGFKPKDAAEITVREIIFENRDDPGIARKVQIEAQDFLRRVKEGLI*
Ga0137362_113900041	3300012205	Vadose Zone Soil	AAEIAAREIMFENHDDPDIARKVQIEVNDFLRRSEGKG*
Ga0137380_102143372	3300012206	Vadose Zone Soil	MRGFKPKDAAEITMQEIIFEFRDDPDIARRVQIEAKDFIQRVKEGLI*
Ga0137380_106258922	3300012206	Vadose Zone Soil	LARCDLCNARAKGLVKRGFKPKDAAEIAAREIMFEKHDDPDIARKVQIEAQGFLRRVKEGLI*
Ga0137381_104276871	3300012207	Vadose Zone Soil	MMVARDGVGFKPKDAAEITAKEIMFENHDDPDIARKVQIEVNDFL
Ga0137376_100906835	3300012208	Vadose Zone Soil	MRGFEPKDAAEIAAREIMFENDHDPDIASKVQIEAQHFLRRVKKGLI*
Ga0137379_102466363	3300012209	Vadose Zone Soil	MRGFNPKDAAEITMQEIIFEFRDDPDIARRVQIEAKDFLQRVKEGLI*
Ga0137379_110985891	3300012209	Vadose Zone Soil	KPKEAAEIAAREIMFENHDDPDIARKVQIEVNDFLRRSEGKG*
Ga0137378_107573522	3300012210	Vadose Zone Soil	MRGFKPKDAAEIAAREIMFENDHDPDIASKVQIEAQHFLRRVKEGLI*
Ga0137377_102915152	3300012211	Vadose Zone Soil	MRGFKPKDAAEITMQEIIFGFRDDPDIARRVQIEAKDFLQRVKEGLI*
Ga0137377_108642482	3300012211	Vadose Zone Soil	FKPKDAAEIAAREIMFENDHDPDIARKVQIEVNDFLRRVKEG*
Ga0137370_103825201	3300012285	Vadose Zone Soil	IARAKGLVMRGLKPKDAAEIAAREIMFENDHDPDIASKVQIEAQDFMRRVKKGLI*
Ga0137386_104226752	3300012351	Vadose Zone Soil	MRGFKPKDAAEITMQEIIFEFRDDPDIARRVQIEAKD
Ga0137366_108208262	3300012354	Vadose Zone Soil	KDAAEIAAREIMFENDHDPDIARKVRREAQDFLRRVKEGLI*
Ga0137384_102281123	3300012357	Vadose Zone Soil	MRGFTPKDAAEIAAREIMFENDHDPDIASKVQIEAQHFLRRVKKGLI*
Ga0137384_109492252	3300012357	Vadose Zone Soil	AKGLVMRGFKPKDAAEIAAREIMFENDHDPDIASKVQIEAQHFLRRVKKGLI*
Ga0137361_109932782	3300012362	Vadose Zone Soil	AKGLVMRGFKPKDAADIAAREIMFENHDDPDIARKVQIEVNDFLRRVKEG*
Ga0134110_105574001	3300012975	Grasslands Soil	IAAREIMFENDHDPDIASKVQIEAQDFLRRVKKGLI*
Ga0134076_104084581	3300012976	Grasslands Soil	KGLVKRSFKPKDAADITAREIMFENHDDPDIARKVQIEAQGFLRRVKEGLI*
Ga0134081_103148872	3300014150	Grasslands Soil	MRGLKLKDAAEIAAREIMFENDHDPDIASKVQIEAQDFLRRVKKGLI*
Ga0134075_105489211	3300014154	Grasslands Soil	VPKVKRGFKAKDAAEIAAREIMFENHDDPDIARKVQIEM
Ga0134078_102178421	3300014157	Grasslands Soil	VMRGFKPKDAAEIAAREIMFENDHDPDIASKVQIEAQDFMRRVKEG*
Ga0134078_106590461	3300014157	Grasslands Soil	DAAEIAAREIMFENDHDPDIARKVQIEAQDFLRRVKEG*
Ga0137403_100283119	3300015264	Vadose Zone Soil	DPDSFIARAKGLVKRGFKPKDAADITAREIMFENHDDPDIARKVQIEAQGFLRRVKEGLI
Ga0134073_103787871	3300015356	Grasslands Soil	MRGFKPKDAAEIAAREIMFENDHDPDIASKVQIEAQDFLRRVKEG*
Ga0134072_101321911	3300015357	Grasslands Soil	MRGLTPKDAAEIAAREIMFENDHDPDIASKVQIEAQDFMRRVKEG*
Ga0134085_101612871	3300015359	Grasslands Soil	MRGFKPKDAAEIAAREIMFENDHDPDIARKVQIEAQDFMRRVKEG*
Ga0134112_104643741	3300017656	Grasslands Soil	FINRAKGLVMRGFKPKDAAEIAAREIMFENDHDPDIARKVQIEAQDFMRRVKKGLI
Ga0134083_100298181	3300017659	Grasslands Soil	MRGFKPKDAAEIAAREIMFENDHDPDIASKVQIEAQDFLRRVKKGLI
Ga0066655_102201462	3300018431	Grasslands Soil	MRGFKPKDAAEITMQEIIFEFRDDPDIARRVQIEAKDFLQRVKEGLI
Ga0066669_119446011	3300018482	Grasslands Soil	MRGLKPKDAAEIAAREIMFENDHDPDIARKVQREAQDFLRRVKEGLI
Ga0207684_102010473	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRGFKPKDAAEIAARDIMFENDHDPDIARKVQIEAQDFLRRVKEG
Ga0207646_118755502	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	PKDAAEIAAREIMFENDHDPDIARKVQREAQDFLRRVKEGLS
Ga0209350_10201861	3300026277	Grasslands Soil	MRGFKPKDAAEIAAREIMFENDHDPDIASKVQIEAQDFMRRVKEG
Ga0209761_12662271	3300026313	Grasslands Soil	VKRGFKPKDAADITAREIMFENHDDPDIARKVQIEAQGFLRRVKEGLI
Ga0209470_10660582	3300026324	Soil	RGFKPKDAAEIAAREIMFENDHDPDIASKVQIEAQDFMRRVKEG
Ga0209470_11752322	3300026324	Soil	MMVARDGVGFKPKDAAEITAKEIMFENHDDPDIARKVQIEVNDFLRRVKEGLI
Ga0209267_11794952	3300026331	Soil	MRGFKPKDAAEITAKEIMFENHDDPDIARKVQIEVNDFLRRVKEGLI
Ga0209267_13111281	3300026331	Soil	MRGFKPKDAAEIAASEIMFENHDDPDIARKVQIEVNDFLRRLKEGLI
Ga0209057_10317992	3300026342	Soil	MRGFKPKDAAEIAVREIIFENRDDPGIARKVQIEAQDFLRRVKEGLI
Ga0209057_10562111	3300026342	Soil	DSFTARAKGLVKRGFKPKDAAEIAASEIMFEKHDDPDIARKVQIEVNDFLRRVKEGLI
Ga0209690_10759011	3300026524	Soil	MRGIKPKEAAEIAASEIMFEKHDDPDIARKVQIEVNDFLRRVKEGLI
Ga0209059_12354272	3300026527	Soil	RGFKPKDAAEIAAREIMFENDHDPDIARKVQIEAQDFLRRVKEG
Ga0209378_10673431	3300026528	Soil	VRRGFKPKDAAEIAAREIMFENDHDADIARKVQIEVNDFLRRVKEG
Ga0209160_10276505	3300026532	Soil	MRGFKPKDAAEIASKEIMFENDHDPDIARKVRIEAKDFLNRVKET
Ga0209160_11172561	3300026532	Soil	MRGFKPKDAAEIAAREIMFENDHDPDIARKVQIEVNDFLRRVKEG
Ga0209157_10825273	3300026537	Soil	MMVARDGVGFKPKDAAEITAKEIMFENHDDPDIARKVQIEVNDFLRRVKEG
Ga0209056_100650576	3300026538	Soil	MMVARDGVGFKPKDAAEITAKEIMFENHDDPDIARKVQIEVNDFLRRVKE
Ga0209577_103596172	3300026552	Soil	VKRGFKPKDAAEIAAREIMFENHDDPDIARKVQIEAQDFPRRVKEVRWPR
Ga0209689_11720951	3300027748	Soil	KGLVMRGFKPKDAAEIAASEIMFENHDDPDIARKVQIEVNDFLRRLKEGLI
Ga0209180_102991382	3300027846	Vadose Zone Soil	MRGFKPKDAAEITVREIIFENRDDPDIARRVQIEAKDFLQRVKEGLI
Ga0209701_102802281	3300027862	Vadose Zone Soil	MRGFKPKDAAEITMQEIIFEFRDDPDIARRVQIEAKDFLQRVKEGL
Ga0209701_102990212	3300027862	Vadose Zone Soil	LIMLGFKPKDAAEITVREIIFENRDDPDIARRVQIEAKDFLQRVKEGLI
Ga0209590_103009671	3300027882	Vadose Zone Soil	RGLIMRGFKPKDAAEIAVREIIFENRDDPGIARKVQIEAQDFLRRVKEGLI
Ga0307472_1023707501	3300032205	Hardwood Forest Soil	TRAKGLVMRGFRPKDAAEIAAREIMFENDHDPDIARKVEIEAQDFLRRMREGLS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F070481

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences