Metagenome Family F070471

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070471
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	78 residues
Representative Sequence	MTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRRAA
Number of Associated Samples	112
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	42.62 %
% of genes near scaffold ends (potentially truncated)	44.72 %
% of genes from short scaffolds (< 2000 bps)	78.86 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.870 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (8.943 % of family members)
Environment Ontology (ENVO)	Unclassified (47.967 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.789 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.12% β-sheet: 26.92% Coil/Unstructured: 50.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF07730	HisKA_3	4.07
PF12900	Pyridox_ox_2	4.07
PF02518	HATPase_c	3.25
PF11154	DUF2934	2.44
PF02782	FGGY_C	2.44
PF04362	Iron_traffic	1.63
PF04519	Bactofilin	1.63
PF12681	Glyoxalase_2	1.63
PF00916	Sulfate_transp	1.63
PF05974	DUF892	1.63
PF01740	STAS	1.63
PF11066	DUF2867	0.81
PF01979	Amidohydro_1	0.81
PF13462	Thioredoxin_4	0.81
PF07238	PilZ	0.81
PF00313	CSD	0.81
PF04015	DUF362	0.81
PF06379	RhaT	0.81
PF00406	ADK	0.81
PF00370	FGGY_N	0.81
PF04185	Phosphoesterase	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	4.07
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	4.07
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	4.07
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	4.07
COG2924	Fe-S cluster biosynthesis and repair protein YggX	Posttranslational modification, protein turnover, chaperones [O]	3.25
COG0659	Sulfate permease or related transporter, MFS superfamily	Inorganic ion transport and metabolism [P]	1.63
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	1.63
COG2233	Xanthine/uracil permease	Nucleotide transport and metabolism [F]	1.63
COG2252	Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family	Nucleotide transport and metabolism [F]	1.63
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	1.63
COG0563	Adenylate kinase or related kinase	Nucleotide transport and metabolism [F]	0.81
COG2006	Uncharacterized conserved protein, DUF362 family	Function unknown [S]	0.81
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.87 %
Unclassified	root	N/A	8.13 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.87 %
Unclassified	root	N/A	8.13 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.87 %
Unclassified	root	N/A	8.13 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	82.11 %
Unclassified	root	N/A	8.13 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	66.67 %
Unclassified	root	N/A	8.13 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.07 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.63 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	66.67 %
Unclassified	root	N/A	8.13 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.07 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.63 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	66.67 %
Unclassified	root	N/A	8.13 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.07 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.63 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	66.67 %
Unclassified	root	N/A	8.13 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	2.44 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.63 %
Desulfovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae	0.81 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	66.67 %
Unclassified	root	N/A	8.13 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2.44 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.63 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.81 %
Desulfohalovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfohalovibrio	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	66.67 %
Unclassified	root	N/A	8.13 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2.44 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.63 %
Desulfohalovibrio reitneri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfohalovibrio → Desulfohalovibrio reitneri	0.81 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10180486	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300004114\|Ga0062593_101317238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300004156\|Ga0062589_100058982	All Organisms → cellular organisms → Bacteria → Acidobacteria	2204	Open in IMG/M
3300004479\|Ga0062595_102238296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300004643\|Ga0062591_100995645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300005162\|Ga0066814_10052795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300005172\|Ga0066683_10056085	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2334	Open in IMG/M
3300005179\|Ga0066684_10546797	Not Available	776	Open in IMG/M
3300005187\|Ga0066675_11145785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300005293\|Ga0065715_10633813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300005293\|Ga0065715_10848938	Not Available	592	Open in IMG/M
3300005295\|Ga0065707_10652148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300005327\|Ga0070658_11739237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300005329\|Ga0070683_102408288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300005331\|Ga0070670_100052418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3504	Open in IMG/M
3300005331\|Ga0070670_101878491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300005335\|Ga0070666_10330448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1088	Open in IMG/M
3300005335\|Ga0070666_10687830	All Organisms → cellular organisms → Bacteria → Acidobacteria	750	Open in IMG/M
3300005339\|Ga0070660_100109064	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2201	Open in IMG/M
3300005344\|Ga0070661_100043200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3292	Open in IMG/M
3300005344\|Ga0070661_100076118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2473	Open in IMG/M
3300005347\|Ga0070668_101543872	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300005353\|Ga0070669_100639045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	894	Open in IMG/M
3300005354\|Ga0070675_100747174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M
3300005354\|Ga0070675_101878101	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300005367\|Ga0070667_102135635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300005441\|Ga0070700_100858583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300005446\|Ga0066686_10063582	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2291	Open in IMG/M
3300005455\|Ga0070663_100059104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2755	Open in IMG/M
3300005457\|Ga0070662_101220742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300005459\|Ga0068867_100095892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2257	Open in IMG/M
3300005468\|Ga0070707_101944162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300005536\|Ga0070697_100001251	All Organisms → cellular organisms → Bacteria	19206	Open in IMG/M
3300005542\|Ga0070732_10703819	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300005563\|Ga0068855_101006150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300005577\|Ga0068857_101075969	Not Available	776	Open in IMG/M
3300005578\|Ga0068854_101838175	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300005615\|Ga0070702_101433130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300005617\|Ga0068859_100081148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3285	Open in IMG/M
3300005841\|Ga0068863_100359342	All Organisms → cellular organisms → Bacteria → Acidobacteria	1419	Open in IMG/M
3300005841\|Ga0068863_100581550	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1107	Open in IMG/M
3300005843\|Ga0068860_102617678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300006028\|Ga0070717_11336763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300006173\|Ga0070716_101184974	Not Available	613	Open in IMG/M
3300006854\|Ga0075425_100848003	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1046	Open in IMG/M
3300009012\|Ga0066710_100248283	All Organisms → cellular organisms → Bacteria	2573	Open in IMG/M
3300009137\|Ga0066709_100585768	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1586	Open in IMG/M
3300009174\|Ga0105241_10287629	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfohalovibrio → Desulfohalovibrio reitneri	1406	Open in IMG/M
3300009177\|Ga0105248_10304700	All Organisms → cellular organisms → Bacteria → Acidobacteria	1794	Open in IMG/M
3300009177\|Ga0105248_11513409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300009177\|Ga0105248_12680476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300009551\|Ga0105238_12454606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300009553\|Ga0105249_12924842	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300010043\|Ga0126380_11007269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300010048\|Ga0126373_12870145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300010358\|Ga0126370_11127470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300010360\|Ga0126372_10215722	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1613	Open in IMG/M
3300010373\|Ga0134128_10968137	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941	Open in IMG/M
3300010376\|Ga0126381_100894796	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300010379\|Ga0136449_101314620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1126	Open in IMG/M
3300010397\|Ga0134124_11796411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300012212\|Ga0150985_106094266	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300012922\|Ga0137394_11176108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300012986\|Ga0164304_10719219	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	761	Open in IMG/M
3300012989\|Ga0164305_10262021	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1255	Open in IMG/M
3300013102\|Ga0157371_11352807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300013104\|Ga0157370_11813318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300013105\|Ga0157369_10151373	All Organisms → cellular organisms → Bacteria → Acidobacteria	2452	Open in IMG/M
3300013297\|Ga0157378_11076895	All Organisms → cellular organisms → Bacteria → Acidobacteria	840	Open in IMG/M
3300013306\|Ga0163162_11009317	Not Available	941	Open in IMG/M
3300013306\|Ga0163162_12353967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300013307\|Ga0157372_11945539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300014325\|Ga0163163_10326020	All Organisms → cellular organisms → Bacteria → Acidobacteria	1590	Open in IMG/M
3300014326\|Ga0157380_10338026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1403	Open in IMG/M
3300014838\|Ga0182030_10134000	All Organisms → cellular organisms → Bacteria	3226	Open in IMG/M
3300014969\|Ga0157376_10771116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M
3300015371\|Ga0132258_12251181	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1367	Open in IMG/M
3300015372\|Ga0132256_100987683	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	957	Open in IMG/M
3300016341\|Ga0182035_10647265	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300016357\|Ga0182032_10206071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1500	Open in IMG/M
3300017792\|Ga0163161_11122938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300017927\|Ga0187824_10010395	All Organisms → cellular organisms → Bacteria → Acidobacteria	2667	Open in IMG/M
3300017944\|Ga0187786_10288374	Not Available	668	Open in IMG/M
3300017947\|Ga0187785_10340619	Not Available	702	Open in IMG/M
3300017966\|Ga0187776_10008564	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5440	Open in IMG/M
3300017994\|Ga0187822_10070586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1019	Open in IMG/M
3300018085\|Ga0187772_10023186	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3605	Open in IMG/M
3300018085\|Ga0187772_10178862	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1416	Open in IMG/M
3300018090\|Ga0187770_10366444	All Organisms → cellular organisms → Bacteria → Acidobacteria	1128	Open in IMG/M
3300019785\|Ga0182022_1192055	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1142	Open in IMG/M
3300025290\|Ga0207673_1046606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300025315\|Ga0207697_10399595	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300025901\|Ga0207688_10024718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3296	Open in IMG/M
3300025903\|Ga0207680_10921670	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300025904\|Ga0207647_10090252	All Organisms → cellular organisms → Bacteria → Acidobacteria	1828	Open in IMG/M
3300025908\|Ga0207643_10236989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1121	Open in IMG/M
3300025911\|Ga0207654_11326552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300025914\|Ga0207671_10604089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300025918\|Ga0207662_10111999	All Organisms → cellular organisms → Bacteria	1703	Open in IMG/M
3300025919\|Ga0207657_10117053	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2195	Open in IMG/M
3300025920\|Ga0207649_10505276	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	920	Open in IMG/M
3300025930\|Ga0207701_10357546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1262	Open in IMG/M
3300025931\|Ga0207644_10240152	All Organisms → cellular organisms → Bacteria → Acidobacteria	1442	Open in IMG/M
3300025932\|Ga0207690_10258813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1347	Open in IMG/M
3300025933\|Ga0207706_10247442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1558	Open in IMG/M
3300025940\|Ga0207691_11280524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300025942\|Ga0207689_10792927	Not Available	800	Open in IMG/M
3300025960\|Ga0207651_10043715	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2992	Open in IMG/M
3300025960\|Ga0207651_10487915	Not Available	1063	Open in IMG/M
3300026142\|Ga0207698_12728215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300027548\|Ga0209523_1003090	All Organisms → cellular organisms → Bacteria → Acidobacteria	2608	Open in IMG/M
3300027654\|Ga0209799_1079778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300027903\|Ga0209488_10661649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300028736\|Ga0302214_1153080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300028853\|Ga0302203_1080217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300030491\|Ga0302211_10214959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300030838\|Ga0311335_10000489	All Organisms → cellular organisms → Bacteria	30160	Open in IMG/M
3300031720\|Ga0307469_10279088	All Organisms → cellular organisms → Bacteria → Acidobacteria	1364	Open in IMG/M
3300031918\|Ga0311367_10012266	All Organisms → cellular organisms → Bacteria	9377	Open in IMG/M
3300031962\|Ga0307479_10043860	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4293	Open in IMG/M
3300032261\|Ga0306920_101613763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	922	Open in IMG/M
3300032782\|Ga0335082_10122592	All Organisms → cellular organisms → Bacteria	2549	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	52.03%
Environmental	Environmental	47.97%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	52.03%
Terrestrial	Environmental → Terrestrial	46.34%
Aquatic	Environmental → Aquatic	1.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	42.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	33.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.89%
Peat	Environmental → Terrestrial → Peat	4.06%
Freshwater	Environmental → Aquatic → Freshwater	1.63%
Roots	Host-Associated → Plants → Roots	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	26.02%
Soil	Host-Associated → Plants → Rhizosphere → Soil	20.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.01%
Loam	Environmental → Terrestrial → Soil → Loam	8.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.32%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.25%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.63%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	20.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.01%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.06%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.06%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.44%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.63%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.63%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	8.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	8.13%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.06%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	4.06%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.25%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.25%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.25%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.25%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.44%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.44%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.63%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.81%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.81%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.81%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.81%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019785	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300025290	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5	Host-Associated	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028736	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_3	Environmental	Open in IMG/M
3300028853	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E1_2	Environmental	Open in IMG/M
3300030491	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_3	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_101804863	3300001867	Forest Soil	MKEQITLCERVKRLGYARNTQVRLYGEVFDLVSDPVSIGDNFVFVDALEQKSGRVRRLRIPLSIVQMAERDRTAA*
Ga0062593_1013172381	3300004114	Soil	MTNMTKERYTLCESIKRLGYARNNQVRLYGEVLDLVSDPVSVGETLVFVDALERKSGRVRRVGIPRTIVNMAKQDRRAA*
Ga0062589_1000589823	3300004156	Soil	MTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGEPLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRHAA*
Ga0062595_1022382962	3300004479	Soil	IWVGETFPRLRRMTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGEPLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRHAA*
Ga0062591_1009956451	3300004643	Soil	MRIPIWVGETFPRLRRMTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGEPLVFIDGVERKSGHVRRVGIPR
Ga0066814_100527953	3300005162	Soil	MRIPIWVGETFPRLRRMTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQNRRAA*
Ga0066683_100560851	3300005172	Soil	RKNQPDTLCETIKRLGYAQNNQVRLYGEVFDLVSDPVSVGENFVFVDGLERKSGHLRRVRIPSTIVEMARKKNRSA*
Ga0066684_105467971	3300005179	Soil	MTKEQITLCGRLRQLGYAQDRQVRLYGEVFELVSDPISVSDNLVFVDAREQRSGQKRRVRIPITIVQMAKQQARAA*
Ga0066675_111457851	3300005187	Soil	QPDTLCETIKRLGYARNNQVRLYGEVFDLVSDPVSVGENLVFVDALEQKSGQVRRVRIPPTIVQIARIKRRAA*
Ga0065715_106338131	3300005293	Miscanthus Rhizosphere	MRIPIWVGETFPRLRRMTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGVERKSGHVRRVGIP
Ga0065715_108489381	3300005293	Miscanthus Rhizosphere	MTNMTKQQVTLCESIKRLGYARNNQVRFYGEVLDLVSDPVSVGETLVYVDALERKSGHVRRVGIPRTIVNMARQNRRAA*
Ga0065707_106521482	3300005295	Switchgrass Rhizosphere	MTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGVERKSGHVRRVGIP
Ga0070658_117392371	3300005327	Corn Rhizosphere	MRNPIWVGETFPRLRRMTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRRAA*
Ga0070683_1024082882	3300005329	Corn Rhizosphere	DTLCESIKRLGYARNNQVKLYGEVFDLVSDPVRVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRRAA*
Ga0070670_1000524187	3300005331	Switchgrass Rhizosphere	MRIPIWVGETFPRLRRMTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGEPLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRHAA*
Ga0070670_1018784912	3300005331	Switchgrass Rhizosphere	RRMTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVRVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRRAA*
Ga0070666_103304483	3300005335	Switchgrass Rhizosphere	MTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRRAA*
Ga0070666_106878303	3300005335	Switchgrass Rhizosphere	GYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGMERKSGHVRRVGIPRTIVNMAKQDRRAA*
Ga0070660_1001090643	3300005339	Corn Rhizosphere	MTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRHAA*
Ga0070661_1000432005	3300005344	Corn Rhizosphere	RMTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGEPLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRHAA*
Ga0070661_1000761181	3300005344	Corn Rhizosphere	MTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVRVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRRAA*
Ga0070668_1015438722	3300005347	Switchgrass Rhizosphere	MRIPIWEGETFPRLRRMTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRRAA*
Ga0070669_1006390452	3300005353	Switchgrass Rhizosphere	MRIPIWVGETFPRLRRMTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRRAA*
Ga0070675_1007471742	3300005354	Miscanthus Rhizosphere	MRIPIWVGETFPRLRRMTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGEPLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRRAA*
Ga0070675_1018781011	3300005354	Miscanthus Rhizosphere	MTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGMERKSGHVRRVGIPRTIVNMAKQDRRAA*
Ga0070667_1021356352	3300005367	Switchgrass Rhizosphere	CESIKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRRAA*
Ga0070700_1008585831	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MRIPIWVGETFPRLRRMTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGMERKSGHVRRVGIPRTIVNMAKQDRRAA*
Ga0066686_100635823	3300005446	Soil	LGYAQNNQVRLYGEVFDLVSDPVSVGENFVFVDGLERKLGHLRRVRIPSTIVEMARKKNRAA*
Ga0070663_1000591045	3300005455	Corn Rhizosphere	FPRLRRMTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGEPLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRHAA*
Ga0070662_1012207421	3300005457	Corn Rhizosphere	PIWVGETFPRLRRMTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGMERKSGHVRRVGIPRTIVNMAKQDRRAA*
Ga0068867_1000958922	3300005459	Miscanthus Rhizosphere	MRIPIWVGETFPRLRRMTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRHAA*
Ga0070707_1019441621	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	GRNQPDTLCETIKRLGYAQNNQVRFYGEVYDLVSDPVSVGENFVFVDALEQKSGQVRRVRIPPTIVQMARIKRRAA*
Ga0070697_10000125120	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTKDHTTLCEMLKRLGFAQNSEVRLYGEVFDLVSDPVSIGDNLVFVDAVERKSGDARRIRIPLTIVRMAQQDRRAA*
Ga0070732_107038191	3300005542	Surface Soil	MIIEEVTLCERIRRLGYAQNAQVTLYGEIFDLVSDPIIVGENLVFVDAFERRSGRRRRVRLPLNIIRMARQPRGAFLGHSR
Ga0066707_106682052	3300005556	Soil	MTKDHTTLCEMIKRLGFAQNSEVRLYGEVFDLVSDPVSVGDNLVFVDAVERKSGDARRIRIPLTIVRMAQRDR
Ga0068855_1010061502	3300005563	Corn Rhizosphere	MTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVRVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQESRSMSEKPNEILS*
Ga0068857_1010759691	3300005577	Corn Rhizosphere	LMTNMTKQQVTLCESIKRLGYARNNQVRFYGEVLDLVSDPVSVGETLVYVDALERKSGHVRRVGIPRTIVNMARQNRRAA*
Ga0068854_1018381751	3300005578	Corn Rhizosphere	PRLRRMTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRRAA*
Ga0070702_1014331302	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MRIPIWVGETFPRLRRMTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDR
Ga0068859_1000811485	3300005617	Switchgrass Rhizosphere	TKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRHAA*
Ga0068863_1003593422	3300005841	Switchgrass Rhizosphere	MTNMTKERDTLCESIKRLGYARNNQVRLYGEVLDLVSDPVSVGETLVFVDALERKSGRVRRVGIPRTIVNMAKQDRRAA*
Ga0068863_1005815501	3300005841	Switchgrass Rhizosphere	TKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGEPLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRHAA*
Ga0068860_1026176781	3300005843	Switchgrass Rhizosphere	CESIKRLGYARNNQVKLYGEVFDLVSDPVSVGEPLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRHAA*
Ga0070717_113367632	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	RRPNQPSLCETLKRLGYARDNQVRLYGQVFDLVSDPVRLSENFVFVDAVERKSGQFRRVRIPRTIIQMARMKGRAA*
Ga0070716_1011849742	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	RYPSTRNPAPSSFQIRKFMTKDHTTLCEMLKRLGFAQNSEVRLYGEVFDLVSDPVSVGDNLVFVDAVERKSGDARRIRIPLTIVRMAQQDRRAA*
Ga0075425_1008480031	3300006854	Populus Rhizosphere	ETLKRLGYAQDSQVKLYGEIFQLVSDPISIGENLVFVDALHGRSGKVMRVRIPPTLLQMARIKARAA*
Ga0066710_1002482832	3300009012	Grasslands Soil	MTKDHTTLCEMIKRLGFAQNSEVRLYGEVFDLVSDPVSVGDNLVFVDAVERKSGDARRIRIPLTIVRMAQRDRRAA
Ga0066709_1005857682	3300009137	Grasslands Soil	MTKDHTTLCEMIKRLGFAQNSEVRLYGEVFDLVSDPVSVGDNLVFVDAVERKSGDARRIRIPLTIVRMAQRDRRAA*
Ga0105241_102876291	3300009174	Corn Rhizosphere	KRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRRAA*
Ga0105248_103047003	3300009177	Switchgrass Rhizosphere	MTNMTKQQVTLCESIKRLGYARNNQVRFYGEVLDLVSDPVSVGETLVYVDALERKSDHVRRVGIPRTIVNMARQNRRAA*
Ga0105248_115134092	3300009177	Switchgrass Rhizosphere	RRMTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGMERKSGHVRRVGIPRTIVNMAKQDRRAA*
Ga0105248_126804761	3300009177	Switchgrass Rhizosphere	TFPRLRRMTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVRVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRRAA*
Ga0105238_124546061	3300009551	Corn Rhizosphere	RNRPDTLCETLKHLGYSQNNQVRLYGEVFDLVSDPVPVGDNFVFVDALERKSGQVRRVRIPPTIVQMARVKRRAA*
Ga0105249_129248421	3300009553	Switchgrass Rhizosphere	SLCETLKRLGYAHDNQVRLYGQVFDLVSDPVILSENFVFVDAVERKSGQFRRVRIPRTIIQMARMKGRVA*
Ga0126380_110072691	3300010043	Tropical Forest Soil	MKTEQSTLCARLRQLGYAQDRQVKLYGEVFELVSDPISVGDNLVFVDALERKSGQRRRVRIPLTVVHMARQEERAA*
Ga0126373_128701451	3300010048	Tropical Forest Soil	GRTQPPICETLKRLGYAQDNQVKLYGEVFDLVSDPVSVSENFVFVDALERKSGQFRRVRIPRTIIQMARMKSRAA*
Ga0126370_111274701	3300010358	Tropical Forest Soil	MIQPPVRDSQHRGNMKQQASLCENIKRLGYSPNQQVKLYGEVFQLLADPVFVTENFVFVDALEKKTGHARRVRIPLTVIQMARNSRRAA*
Ga0126372_102157221	3300010360	Tropical Forest Soil	AIKRLGYARNNRVRLYGEVFDLVSDPISVGETLVFVDAVERKSGQVRRVRIPSTIVQIARINRRAA*
Ga0134128_109681372	3300010373	Terrestrial Soil	LKRLGYARNNQVRLYGEVFDLVSDPIRVGDGIVFVDALEQKSGQLRRVSIPRPIVQMAKKDRRSA*
Ga0126381_1008947962	3300010376	Tropical Forest Soil	MKTEQSTLCARLRQLGYAQDRQVKLYGEVFELVSDPISVGDNLVFVDALERKSGQRRRVRIPLTVVHMARQEER
Ga0136449_1013146202	3300010379	Peatlands Soil	MTKQQVTLCESIKASGYARNNQVTLYGEVFELVSDPVSVGENFVFVDALERKSGHARRIRIPLTIVQMAKQDRRAA*
Ga0134124_117964111	3300010397	Terrestrial Soil	ARSTSERLSLMANMTNEQVTLCESVKRLGYARNSQVKLYGEVFDLVSDPISVGETLVYVDGQERKSGQVRRIGIPRTIVNIARQDRRAA*
Ga0150985_1060942662	3300012212	Avena Fatua Rhizosphere	RKQLHTLCETIKRLGYAQNNQVTLYGEVFDLVSDPVTIGDNVVFVEGLDRKGRVRRVRIPRTIVQMARIKRRAA*
Ga0137394_111761081	3300012922	Vadose Zone Soil	LCETIKHLGYAQNNQVRLYGEVFDLVSDPVNVGDDFVFVDALEQKSGQLRRVRIPQTIVQMARIRRREG*
Ga0164304_107192191	3300012986	Soil	QPDTLCESLKSLGYAQSNQVVPYGEVFDLVSDPVRVGENFVFVDAQDRKSGHIRHVRIPLTIVQMARMKRRAA*
Ga0164305_102620211	3300012989	Soil	MTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGVERKSGHVRRVGIPRIIVNMAKQDRRAA*
Ga0157371_113528071	3300013102	Corn Rhizosphere	TLCESIKRLGYARNKKVRLYGEVLDLVSDPVSVGETLVFVDALERKSGRVRRVGIPRTIVNMAKQDRRAA*
Ga0157370_118133181	3300013104	Corn Rhizosphere	REQPDTLCETLKRLGYARNNQVRLYGEVFDLVSDPIRVGDGIVFVDALEQKSGQLRRVSIPRPIVQMAKRRVSIPRPIVQMAKKDRRAA*
Ga0157369_101513733	3300013105	Corn Rhizosphere	MTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVRVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRHAA*
Ga0157378_110768951	3300013297	Miscanthus Rhizosphere	IKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGMERKSGHVRRVGIPRTIVNMAKQDRRAA*
Ga0163162_110093173	3300013306	Switchgrass Rhizosphere	MTNMTKQQVTLCESIKRLGYARNNQVRLYGEVLDLVSDPVSVGETLVYVDALERKSGHVRRVGIPRTIVNMARQNRRAA*
Ga0163162_123539672	3300013306	Switchgrass Rhizosphere	MTKERDTLCESIKRLGYARNNQVRLYGEVLDLVSDPVSVGETLVFVDALERKSGRVRRVGIPRTIVNMAKQDRRAA*
Ga0157372_119455391	3300013307	Corn Rhizosphere	SLMTNMTKQQVTLCESIKRLGYARNNQVRFYGEVLDLVSDPVSVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRRAA*
Ga0163163_103260203	3300014325	Switchgrass Rhizosphere	MTKQQVTLCESIKRLGYARNNQVRFYGEVLDLVSDPVSVGETLVYVDALERKSGHVRRVGIPRTIVNMARQNRRAA*
Ga0157380_103380262	3300014326	Switchgrass Rhizosphere	MRIPIWVGETFPRLRRMTKQQDTLCESIKRLGYARNNQVRLYGEVFDLVSDPVSVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRRAA*
Ga0182030_101340002	3300014838	Bog	MTKQQAILCESIKRLGYARNNQVTLYGEVFDLVSDPISVGENFVFVDALERKSGHVRRVSIPLTIVQMAKQDRRAA*
Ga0157376_107711162	3300014969	Miscanthus Rhizosphere	GYARNNQVKLYGEVFDLVSDPVSVGEPLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRHAA*
Ga0132258_122511812	3300015371	Arabidopsis Rhizosphere	MTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGVERKSGHVRRVGIPRTIVNIAKQDRRAA*
Ga0132256_1009876832	3300015372	Arabidopsis Rhizosphere	LCESLKSLGYAQSNQVVPYGEVFDLVSDPVRVGENFVFVDALDRKSGHIRHVRIPLTIVQMARMKRRAA*
Ga0182035_106472652	3300016341	Soil	MIKRLGYAQNNQMRLYGKVFELISDPVSVGEKLFFVDALERKTGLVRRVRIPLNVVYMAREKRHAA
Ga0182032_102060712	3300016357	Soil	MTKQGTVICEMIKRLGYAQNNQVRLYGKVFELISDPVSVGEKLFFVDAIERKTGLVRRVHIALNVVYMAKEELHAA
Ga0163161_111229381	3300017792	Switchgrass Rhizosphere	MRIPIWVGETFPRLRRMTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRRAA
Ga0187824_100103952	3300017927	Freshwater Sediment	MVYDKEQPQKSLRLMTKEQSTLCANIKRLGYTQNSQVRLYGEIFELVSDPFSVGDNLVFVDARERKTGHVRRVRIPLTIMHIAQQESRAA
Ga0187786_102883742	3300017944	Tropical Peatland	VRNQPHTLCEALKRLGYAQGNQAILYGEVFSLVSDPISIGENLVFVDAVDLESDQVKRVRIPPTVVQMARAKRRAA
Ga0187785_103406191	3300017947	Tropical Peatland	VRNQPHTLCEALKRLGYAQGKQAILYGEVFSLVQDPISIGENLVFVDAVDLESDQVKRVRIPPTVVQMARAKRRAA
Ga0187776_100085644	3300017966	Tropical Peatland	MTREQFTLCEAIKCLGYAKNNQVRLYGEVFDLVSDPVSVGDNFVFVDALEWKSGHVRRVRIPPTIVQMAKKHRRAA
Ga0187822_100705861	3300017994	Freshwater Sediment	MVYGNEQPQKSLRLMTKEQSTLCANIKRLGYTQNSQVRLYGEIFELVSDPFSVGDNLVFVDARERKTGHVRRVRIPLTIMHIAQQESRAA
Ga0187772_100231864	3300018085	Tropical Peatland	MSELSISESVKRLGYARNNQVRLYGQVFEVVSDPVSIGDHLVFVDAVELKTGQVRRVTIPRTIVQMARRGGHAA
Ga0187772_101788621	3300018085	Tropical Peatland	GQRVILRDFIMSELSISESVKRLGYARNNQVRLYGQVFEVVSDPVSIGDHLVFVDAVELKTGQVRRVTIPRTIVQMARQGGHAA
Ga0187770_103664443	3300018090	Tropical Peatland	MSESSISESVKRLGYARNNQVRLYGQVFEVVSDPVSIGDHLVFVDAVELKTGQVRRVTIPRTIVQMARRGGHAA
Ga0182022_11920551	3300019785	Fen	MTKQHVTLCESIKRLGYAQNNQVRLYGEVFDLVSDPVSVGDNFVFVDALERKSGSVRRVGIPLTIVHMANQDRRVA
Ga0207673_10466061	3300025290	Corn, Switchgrass And Miscanthus Rhizosphere	MTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGMERKSGHVRRVGIPRTIVNMAKQDRRAA
Ga0207697_103995951	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRHAA
Ga0207688_100247181	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MRIPIWVGETFPRLRRMTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGEPLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRHAA
Ga0207680_109216701	3300025903	Switchgrass Rhizosphere	MTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRRAA
Ga0207647_100902523	3300025904	Corn Rhizosphere	MRIPIWVGETFPRLRRMTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGEPLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRRAA
Ga0207643_102369892	3300025908	Miscanthus Rhizosphere	MTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGEPLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRRAA
Ga0207654_113265522	3300025911	Corn Rhizosphere	MRIPIWVGESFPRLRRMTKQQDTLCGSIKRLGYARNNQVKLYGEVFDLVSDPVRVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRRAA
Ga0207671_106040891	3300025914	Corn Rhizosphere	MTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVRVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRRAA
Ga0207662_101119993	3300025918	Switchgrass Rhizosphere	MRIPIWVGETFPRLRRMTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGMERKSGHVRRVGIPRTIVNMAKQDRRAA
Ga0207657_101170532	3300025919	Corn Rhizosphere	MTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGEPLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRHAA
Ga0207649_105052761	3300025920	Corn Rhizosphere	IKRLGYARNNQVRFYGEVLDLVSDPVSVGETLVYVDALERKSGHVRRVGIPRTIVNMARQNRRAA
Ga0207701_103575461	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	GETFPRLRRMTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRRAA
Ga0207644_102401523	3300025931	Switchgrass Rhizosphere	MTKERYTLCESIKRLGYARNNQVRLYGEVLDLVSDPVSVGETLVFVDALERKSGRVRRVGIPRTIVNMAKQDRRAA
Ga0207690_102588131	3300025932	Corn Rhizosphere	MRIPIWVGETFPRLRRMTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVSVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRHAA
Ga0207706_102474421	3300025933	Corn Rhizosphere	MTNMTKERYTLCESIKRLGYARNNQVRLYGEVLDLVSDPVSVGETLVFVDALERKSGRVRRVGIPRTIVNMAKQDRRAA
Ga0207691_112805241	3300025940	Miscanthus Rhizosphere	MRIPIWVGETFPRLRRMTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVRVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRRAA
Ga0207689_107929271	3300025942	Miscanthus Rhizosphere	MTNMTKQQVTLCESIKRLGYARNNQVRFYGEVLDLVSDPVSVGETLVYVDALERKSGHVRRVGIPRTIVNMARQNRRAA
Ga0207651_100437155	3300025960	Switchgrass Rhizosphere	QDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVRVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDRRAA
Ga0207651_104879152	3300025960	Switchgrass Rhizosphere	MTNMTKQQVTLCESIKRLGYARNNQVRFYGEVLDLVSDPVSVGETLVYVDALERKSGHVRRVGIPRTIVNMAR
Ga0207698_127282152	3300026142	Corn Rhizosphere	MTKQQDTLCESIKRLGYARNNQVKLYGEVFDLVSDPVRVGETLVFIDGVERKSGHVRRVGIPRTIVNMAKQDR
Ga0209523_10030903	3300027548	Forest Soil	MKEQITLCERVKRLGYARNTQVRLYGEVFDLVSDPVSIGDNFVFVDALEQKSGRVRRLRIPLSIVQMAERDRTAA
Ga0209799_10797782	3300027654	Tropical Forest Soil	MTTEQSTLCARLRQLGYAQDHQVKLYGEVFELVSDPISVGDNLVFVDALERKSGQRRRVRIPLTVVHMARQEERAA
Ga0209488_106616491	3300027903	Vadose Zone Soil	HCGRNQPDTLCETIKRLGYAQNNQVRLYGDVFDLVSDPVRVGENFVFVDAVEQKSGRVRRVRIPPTIVQMAR
Ga0302214_11530801	3300028736	Fen	MTKQHVTLCESIKRLGYAQNNQVRLYGEVFDLVSDPVSVGDNFVFVDALERKSGNVRRVGIPLTIVHMAKQDRRAA
Ga0302203_10802171	3300028853	Fen	LMTKQHVTLCESIKRLGYAQNNQVRLYGEVFDLVSDPVSVGDNFVFVDALERKSGSVRRVGIPLTIVHMANQDRRVA
Ga0302211_102149591	3300030491	Fen	RLGYAQNNQVRLYGEVFDLVSDPVSVGDNFVFVDALERKSGSVRRVGIPLTIVHMANQDRRVA
Ga0311335_100004891	3300030838	Fen	KRLGYAQNNQVRLYGEVFDLVSDPVSVGDNFVFVDALERKSGSVRRVGIPLTIVHMANQDRRVA
Ga0307469_102790883	3300031720	Hardwood Forest Soil	MTKDHTTLCEMLKRLGFAQNSEVRLYGEVFDLVSDPVSIGDNLVFVDAVERKSGDARRIRIPLTIVRMAQQDRRAA
Ga0311367_100122664	3300031918	Fen	MTKQHVTLCESIKRLGYAQNNQVRLYGEVFDLVSDPVSVGDNFVFVDALERKSGSVRRVGIPLTIVHMAKQDRRAA
Ga0307479_100438602	3300031962	Hardwood Forest Soil	MKEQITLCERVKRLGYARNTQVRLYGEIFDLVSDPVSIGDNLVFVDALERKSGRVRRVRIPLSIVHMAERDRTAA
Ga0306920_1016137632	3300032261	Soil	MTKQGTVICEMIKRLGYAQNNQVRLYGKVFELTSDPVSVGEKLFFVDALERKTGLVRRVRIPLNVVYMAREKRHAA
Ga0335082_101225922	3300032782	Soil	MTKEQCDLCQTIRRLGYAQNSQVKLYGVVFDLVSDPFSSGGNLVFVDALERKTGHLRRVRIPLTIVHMAKQERRAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F070471

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences