Metagenome Family F070425

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070425
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	88 residues
Representative Sequence	MTEFRAQERAFDATLVFRVVSTTPTKTLAGQLPRRERWILLLLDGKRCIADLAHLTQRSELDVAYTLASFLQQGYIEPLEENL
Number of Associated Samples	73
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.67 %
% of genes near scaffold ends (potentially truncated)	24.39 %
% of genes from short scaffolds (< 2000 bps)	69.11 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.976 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (32.520 % of family members)
Environment Ontology (ENVO)	Unclassified (32.520 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.220 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.33% β-sheet: 8.11% Coil/Unstructured: 58.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF13847	Methyltransf_31	4.88
PF10552	ORF6C	4.07
PF01738	DLH	3.25
PF00106	adh_short	2.44
PF08450	SGL	2.44
PF13411	MerR_1	1.63
PF13649	Methyltransf_25	1.63
PF03704	BTAD	1.63
PF13424	TPR_12	1.63
PF07505	DUF5131	0.81
PF00717	Peptidase_S24	0.81
PF02683	DsbD	0.81
PF13560	HTH_31	0.81
PF07819	PGAP1	0.81
PF02133	Transp_cyt_pur	0.81
PF12681	Glyoxalase_2	0.81
PF00753	Lactamase_B	0.81
PF00391	PEP-utilizers	0.81
PF09851	SHOCT	0.81
PF00881	Nitroreductase	0.81
PF00376	MerR	0.81
PF00083	Sugar_tr	0.81
PF13193	AMP-binding_C	0.81
PF01425	Amidase	0.81
PF13419	HAD_2	0.81
PF03446	NAD_binding_2	0.81
PF02668	TauD	0.81
PF02806	Alpha-amylase_C	0.81
PF08388	GIIM	0.81
PF13360	PQQ_2	0.81
PF02441	Flavoprotein	0.81
PF01243	Putative_PNPOx	0.81
PF00440	TetR_N	0.81
PF09130	DUF1932	0.81
PF07859	Abhydrolase_3	0.81
PF01844	HNH	0.81
PF00400	WD40	0.81
PF04075	F420H2_quin_red	0.81
PF07991	IlvN	0.81
PF14520	HHH_5	0.81
PF00072	Response_reg	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	2.44
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	2.44
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	1.63
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	1.63
COG0059	Ketol-acid reductoisomerase	Amino acid transport and metabolism [E]	1.63
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	0.81
COG4422	Bacteriophage protein gp37	Mobilome: prophages, transposons [X]	0.81
COG2267	Lysophospholipase, alpha-beta hydrolase superfamily	Lipid transport and metabolism [I]	0.81
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.81
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	0.81
COG1075	Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold	Lipid transport and metabolism [I]	0.81
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.81
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.81
COG0499	S-adenosylhomocysteine hydrolase	Coenzyme transport and metabolism [H]	0.81
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	0.81
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	0.81
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.98 %
Unclassified	root	N/A	39.02 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.98 %
Unclassified	root	N/A	39.02 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.98 %
Unclassified	root	N/A	39.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.02 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	37.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.02 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	36.59 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.63 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.02 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	17.89 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	7.32 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.02 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	10.57 %
Chloroflexi bacterium T81	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium T81	4.07 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.25 %
Thermogemmatisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Thermogemmatisporales	1.63 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.63 %
Thermomicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales	0.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.02 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	5.69 %
Chloroflexi bacterium T81	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium T81	4.07 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.25 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.63 %
Ktedonosporobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonosporobacteraceae	1.63 %
Thermogemmatisporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Thermogemmatisporales → Thermogemmatisporaceae	1.63 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples	0.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.02 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	4.07 %
Chloroflexi bacterium T81	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium T81	4.07 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.25 %
Ktedonosporobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonosporobacteraceae → Ktedonosporobacter	1.63 %
Thermogemmatispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Thermogemmatisporales → Thermogemmatisporaceae → Thermogemmatispora	1.63 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.63 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	0.81 %
Ktedonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonospora	0.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.02 %
Chloroflexi bacterium T81	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium T81	4.07 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.25 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	2.44 %
Ktedonosporobacter rubrisoli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonosporobacteraceae → Ktedonosporobacter → Ktedonosporobacter rubrisoli	1.63 %
Thermogemmatispora tikiterensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Thermogemmatisporales → Thermogemmatisporaceae → Thermogemmatispora → Thermogemmatispora tikiterensis	1.63 %
unclassified Ktedonobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter	1.63 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.63 %
Ktedonospora formicarum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonospora → Ktedonospora formicarum	0.81 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	0.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.02 %
Chloroflexi bacterium T81	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium T81	4.07 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.25 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	2.44 %
Ktedonosporobacter rubrisoli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonosporobacteraceae → Ktedonosporobacter → Ktedonosporobacter rubrisoli	1.63 %
Thermogemmatispora tikiterensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Thermogemmatisporales → Thermogemmatisporaceae → Thermogemmatispora → Thermogemmatispora tikiterensis	1.63 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.63 %
Ktedonobacter sp. 13_1_40CM_4_52_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_1_40CM_4_52_4	0.81 %
Ktedonobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp.	0.81 %
Ktedonospora formicarum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonospora → Ktedonospora formicarum	0.81 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	0.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002906\|JGI25614J43888_10024214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_1_40CM_4_52_4	1927	Open in IMG/M
3300002906\|JGI25614J43888_10097967	Not Available	778	Open in IMG/M
3300002906\|JGI25614J43888_10166451	Not Available	592	Open in IMG/M
3300002914\|JGI25617J43924_10137798	Not Available	848	Open in IMG/M
3300002917\|JGI25616J43925_10016680	All Organisms → cellular organisms → Bacteria	3253	Open in IMG/M
3300002917\|JGI25616J43925_10023755	All Organisms → cellular organisms → Bacteria	2720	Open in IMG/M
3300005179\|Ga0066684_10292382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1080	Open in IMG/M
3300005445\|Ga0070708_100058522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	3434	Open in IMG/M
3300005445\|Ga0070708_101619794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium T81	602	Open in IMG/M
3300005454\|Ga0066687_10951585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium T81	512	Open in IMG/M
3300005467\|Ga0070706_100004863	All Organisms → cellular organisms → Bacteria	12870	Open in IMG/M
3300005467\|Ga0070706_100019479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6257	Open in IMG/M
3300005467\|Ga0070706_100034932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	4642	Open in IMG/M
3300005468\|Ga0070707_100045490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4202	Open in IMG/M
3300005468\|Ga0070707_100715945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium T81	964	Open in IMG/M
3300005471\|Ga0070698_100056417	All Organisms → cellular organisms → Bacteria	3980	Open in IMG/M
3300005471\|Ga0070698_100074733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	3394	Open in IMG/M
3300005471\|Ga0070698_100527027	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300005471\|Ga0070698_100592673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium T81	1049	Open in IMG/M
3300005518\|Ga0070699_101949010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium T81	537	Open in IMG/M
3300005533\|Ga0070734_10034244	All Organisms → cellular organisms → Bacteria	3183	Open in IMG/M
3300005536\|Ga0070697_100386717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	1212	Open in IMG/M
3300006028\|Ga0070717_10038344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	3895	Open in IMG/M
3300006028\|Ga0070717_11796133	Not Available	554	Open in IMG/M
3300006032\|Ga0066696_11023966	Not Available	525	Open in IMG/M
3300006050\|Ga0075028_101001178	Not Available	520	Open in IMG/M
3300006174\|Ga0075014_100631472	Not Available	616	Open in IMG/M
3300006796\|Ga0066665_10719117	Not Available	790	Open in IMG/M
3300006800\|Ga0066660_10422453	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300006800\|Ga0066660_11396959	Not Available	549	Open in IMG/M
3300009038\|Ga0099829_10150730	All Organisms → cellular organisms → Bacteria	1855	Open in IMG/M
3300009088\|Ga0099830_10440587	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300009088\|Ga0099830_10870817	Not Available	744	Open in IMG/M
3300009089\|Ga0099828_10061672	All Organisms → cellular organisms → Bacteria	3147	Open in IMG/M
3300009089\|Ga0099828_10155973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	2020	Open in IMG/M
3300009089\|Ga0099828_11553745	Not Available	583	Open in IMG/M
3300009089\|Ga0099828_11975635	Not Available	511	Open in IMG/M
3300009090\|Ga0099827_10957180	Not Available	742	Open in IMG/M
3300009520\|Ga0116214_1007514	All Organisms → cellular organisms → Bacteria	3882	Open in IMG/M
3300009521\|Ga0116222_1360317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	631	Open in IMG/M
3300009698\|Ga0116216_10203578	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300009698\|Ga0116216_10893116	Not Available	532	Open in IMG/M
3300010366\|Ga0126379_11579139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	761	Open in IMG/M
3300010379\|Ga0136449_100031669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	12755	Open in IMG/M
3300010379\|Ga0136449_100390597	All Organisms → cellular organisms → Bacteria	2476	Open in IMG/M
3300010379\|Ga0136449_101198985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1196	Open in IMG/M
3300010379\|Ga0136449_103691530	Not Available	578	Open in IMG/M
3300010379\|Ga0136449_103941883	Not Available	555	Open in IMG/M
3300011269\|Ga0137392_10154281	All Organisms → cellular organisms → Bacteria	1855	Open in IMG/M
3300011269\|Ga0137392_10307733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Thermogemmatisporales → Thermogemmatisporaceae → Thermogemmatispora → Thermogemmatispora tikiterensis	1310	Open in IMG/M
3300011270\|Ga0137391_10614765	Not Available	910	Open in IMG/M
3300012096\|Ga0137389_11660205	Not Available	535	Open in IMG/M
3300012189\|Ga0137388_10012303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	6111	Open in IMG/M
3300012189\|Ga0137388_11821988	Not Available	540	Open in IMG/M
3300012198\|Ga0137364_10444193	Not Available	973	Open in IMG/M
3300012199\|Ga0137383_10000566	All Organisms → cellular organisms → Bacteria	19521	Open in IMG/M
3300012199\|Ga0137383_10027970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3946	Open in IMG/M
3300012199\|Ga0137383_10125199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp.	1876	Open in IMG/M
3300012199\|Ga0137383_10133063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonosporobacteraceae → Ktedonosporobacter → Ktedonosporobacter rubrisoli	1816	Open in IMG/M
3300012199\|Ga0137383_10298913	Not Available	1179	Open in IMG/M
3300012201\|Ga0137365_10520101	Not Available	874	Open in IMG/M
3300012201\|Ga0137365_11053965	Not Available	588	Open in IMG/M
3300012202\|Ga0137363_10233552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	1489	Open in IMG/M
3300012205\|Ga0137362_10188576	All Organisms → cellular organisms → Bacteria	1773	Open in IMG/M
3300012205\|Ga0137362_10289227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1418	Open in IMG/M
3300012206\|Ga0137380_10034958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	4637	Open in IMG/M
3300012206\|Ga0137380_10341735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1336	Open in IMG/M
3300012209\|Ga0137379_10288145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	1553	Open in IMG/M
3300012209\|Ga0137379_10905028	Not Available	787	Open in IMG/M
3300012210\|Ga0137378_10005478	All Organisms → cellular organisms → Bacteria	11011	Open in IMG/M
3300012210\|Ga0137378_11116558	Not Available	703	Open in IMG/M
3300012351\|Ga0137386_10639988	Not Available	765	Open in IMG/M
3300012357\|Ga0137384_10057877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3212	Open in IMG/M
3300012359\|Ga0137385_10523792	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300012361\|Ga0137360_10584906	Not Available	955	Open in IMG/M
3300012363\|Ga0137390_10463408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonospora → Ktedonospora formicarum	1243	Open in IMG/M
3300012363\|Ga0137390_11760403	Not Available	552	Open in IMG/M
3300012917\|Ga0137395_11039476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	584	Open in IMG/M
3300014823\|Ga0120170_1000485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	16251	Open in IMG/M
3300016404\|Ga0182037_11186990	Not Available	670	Open in IMG/M
3300016445\|Ga0182038_11596921	Not Available	587	Open in IMG/M
3300017823\|Ga0187818_10340016	Not Available	662	Open in IMG/M
3300017934\|Ga0187803_10276730	Not Available	667	Open in IMG/M
3300017939\|Ga0187775_10246462	Not Available	683	Open in IMG/M
3300017943\|Ga0187819_10369818	Not Available	827	Open in IMG/M
3300017966\|Ga0187776_10424677	Not Available	894	Open in IMG/M
3300017973\|Ga0187780_10763453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	699	Open in IMG/M
3300017974\|Ga0187777_10708970	Not Available	714	Open in IMG/M
3300018089\|Ga0187774_10585736	Not Available	719	Open in IMG/M
3300018468\|Ga0066662_10449137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1154	Open in IMG/M
3300018468\|Ga0066662_12445108	Not Available	550	Open in IMG/M
3300021171\|Ga0210405_10810352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Thermogemmatisporales → Thermogemmatisporaceae → Thermogemmatispora → Thermogemmatispora tikiterensis	717	Open in IMG/M
3300021560\|Ga0126371_11338910	Not Available	848	Open in IMG/M
3300025885\|Ga0207653_10164009	Not Available	824	Open in IMG/M
3300025910\|Ga0207684_10001238	All Organisms → cellular organisms → Bacteria	28348	Open in IMG/M
3300025910\|Ga0207684_10009591	All Organisms → cellular organisms → Bacteria	8538	Open in IMG/M
3300025910\|Ga0207684_10013765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6987	Open in IMG/M
3300025910\|Ga0207684_10173897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1856	Open in IMG/M
3300025910\|Ga0207684_11587914	Not Available	530	Open in IMG/M
3300025922\|Ga0207646_10008507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	10269	Open in IMG/M
3300025922\|Ga0207646_10565897	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300026319\|Ga0209647_1001236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	22201	Open in IMG/M
3300026319\|Ga0209647_1002585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	14522	Open in IMG/M
3300026319\|Ga0209647_1045430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2414	Open in IMG/M
3300026319\|Ga0209647_1113082	Not Available	1266	Open in IMG/M
3300026319\|Ga0209647_1253677	Not Available	589	Open in IMG/M
3300026319\|Ga0209647_1318195	Not Available	525	Open in IMG/M
3300026354\|Ga0257180_1015540	Not Available	953	Open in IMG/M
3300026361\|Ga0257176_1070142	Not Available	565	Open in IMG/M
3300026507\|Ga0257165_1038719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonosporobacteraceae → Ktedonosporobacter → Ktedonosporobacter rubrisoli	845	Open in IMG/M
3300026551\|Ga0209648_10000296	All Organisms → cellular organisms → Bacteria	37085	Open in IMG/M
3300026551\|Ga0209648_10067878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3008	Open in IMG/M
3300026551\|Ga0209648_10116743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	2161	Open in IMG/M
3300026551\|Ga0209648_10211243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	1471	Open in IMG/M
3300027826\|Ga0209060_10084172	Not Available	1497	Open in IMG/M
3300027846\|Ga0209180_10013780	All Organisms → cellular organisms → Bacteria	4218	Open in IMG/M
3300027846\|Ga0209180_10114662	All Organisms → cellular organisms → Bacteria	1543	Open in IMG/M
3300030707\|Ga0310038_10077819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	1786	Open in IMG/M
3300031670\|Ga0307374_10007928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	16026	Open in IMG/M
3300031910\|Ga0306923_11705623	Not Available	651	Open in IMG/M
3300032160\|Ga0311301_10016128	All Organisms → cellular organisms → Bacteria	22111	Open in IMG/M
3300032160\|Ga0311301_10057599	All Organisms → cellular organisms → Bacteria	8614	Open in IMG/M
3300032160\|Ga0311301_10079889	All Organisms → cellular organisms → Bacteria	6725	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.94%
Aquatic	Environmental → Aquatic	4.06%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.94%
Freshwater	Environmental → Aquatic → Freshwater	2.44%
Sediment	Environmental → Aquatic → Sediment	1.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.36%
Loam	Environmental → Terrestrial → Soil → Loam	18.70%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.06%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.63%
Clay	Environmental → Terrestrial → Soil → Clay	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.34%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	19.51%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	18.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.06%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.81%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	32.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	18.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	14.63%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	10.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.25%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.44%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.63%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.81%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300014823	Permafrost microbial communities from Nunavut, Canada - A3_80cm_0M	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25614J43888_100242141	3300002906	Grasslands Soil	MTEFRTQERGFGASAVFRVVSAMPTTTLASHLPRRERWILLLIDGRRSVADLAHLTQRSQLDVALALARFLQWGYIEPVDKEED*
JGI25614J43888_100979671	3300002906	Grasslands Soil	MTQFRTQQSAFDASSVFRVAPGLHAATIASRLPRRERWVLLLLDGKRSIADLARLTQRSELDVASTLARFLQRGFIESVNFLKPLV*
JGI25614J43888_101664511	3300002906	Grasslands Soil	MPDFFTQERAFVATTVFRVAAGQPATTLASQLPRRERWVLLLLDGRRSITDLARLTRRTELDIASTLASFLHVGYIEPVSVEQFST
JGI25617J43924_101377981	3300002914	Grasslands Soil	MTEFRTQERGFGASAVFRVVSAMPTTTLASHLPRRERWILLLIDGRRSVADLAHLTQRSQLDVALALARFLQWGYIEPVQTAEFRTKRYESG*
JGI25616J43925_100166804	3300002917	Grasslands Soil	MMEFQTQARAFGTSAVFRVVAGQLATSLASQLPRRERWVFLLIDGRHSVADLACLTRRSEFDIAYTLARFLQWSYIEPVNTIEYTTSQFEAGYSPA*
JGI25616J43925_100237556	3300002917	Grasslands Soil	RGRMTEFRTQERGFGASAVFRVVSAMPTTTLASHLPRRERWILLLIDGRRSVADLAHLTQRSQLDVALALARFLQWGYIEPVQTAEFRTKRYESG*
Ga0066684_102923822	3300005179	Soil	MMEFRTQERAFSASAVFSVAAGQFATSLASQLPRRERWVLLLINGRRSVADLARLTQRGELDIAYTLARFLQWGYIEPVSSRSEVLPRQVVSELG*
Ga0070708_1000585222	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MMTEFRTQERGFGASAVFRVVSGLQAPTLASQLPRRERWILLLIDGRRSVTDLARLTQRNELDVALALARFLQWGYIEPINF*
Ga0070708_1016197941	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPDFLTQERAFVATTVFRVAAGQPATTLASQLPRRERWVLLLLDGRRSITDLARLTRRTELDIASTLASFLHVGYIEPVSVEQFSTTKEERYAGSV*
Ga0066687_109515852	3300005454	Soil	MMEFRTQEKAPGASAVFRVAAGLLATSLASQLPRRERWVLLLIDGRRSVADLARLTQRGELDIAYTLARFLQSGY
Ga0070706_1000048638	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTEFRAQERVIDSSLVFKVVSTIPAKTLAGQLPRRERWILLLLDGKRSIADLAHLTQRSEHDVAYTLTRFLQQGYIEPVAKHHSQ*
Ga0070706_1000194797	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MGWMLVNDPKWVIYHFDASTAFRVALGFQAAALANSLPRRERWVLLLLDGRRSVATVARLTQRSELDVASTPARFLHLGYIEPVHAVESRQ*
Ga0070706_1000349323	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MEFRSQERSFGASAVFQMVSGIPATTLASQLPRRERWILLLIDGRRSIADLAHLTQRSQLDVALALARFLQWGYIEAVDTRADGLGR*
Ga0070707_1000454902	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MEFRTQERGFGASAVFRVVPGLQAAALASQLPRRERWILLLVDGRRSVATVARLTQRSELDVASTLAKFLHWGYIEPVQAVEHMQ*
Ga0070707_1007159451	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTEFRTQERVFGASAVFRVVSAMPTTTLASQLPRRESWILLLIDGRRSVADLARLTQRSQLDMALALARFLQWGYIEPVDKEED*
Ga0070698_1000564175	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTEFRTQERGFGASAVFRVVSAMPTTTLASQLPRRERWILLLIDGRRSVADLAHLTQRSQLDVALALARFLQWGYIEPVKAVEFRTSRFESTYDST*
Ga0070698_10007473310	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	ESAFGASTVFQVISGTPTTTLASHLPRRERWVLLLLDGRHTLADLARLTQRSELDVASTLARFLQSGFIEPVHAVESMQ*
Ga0070698_1005270272	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPDFLTQERAFAATTVFRVAAGQPATTLASQLPRRERWVLLLLDGRRSITDLARLTRRTELDIASTLASFLHVGYIEPVSVEQFSTTKEERYAGSV*
Ga0070698_1005926731	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MMTEFRTQERGFGASAVFRVVATMPTTTLANQLPRRERWILLLIDGRRSVADLARLIQRSELDVASTLARFLQWGYIEPVKAVEFRTSRFESTYDS
Ga0070699_1019490102	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSEFHTQERGFGASAVFRVVSAQSTTTLASQLPRRERWILLLIDGRRSVADLAHLTQRSQLDVAHTLARFLQWGYIEPI
Ga0070734_100342441	3300005533	Surface Soil	MMEFRTQERAPGASAVFRVAAGQLVTSLASQLPRRERWVLLLIDGRRSVAQVARLTQRSELDVASTLVKFLHRGYIEPVQAVEHMQ*
Ga0070697_1003867171	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VFRVVAGQLATSLASQLPRRERWVFLLIDGRHSVADLACLTRRSEFDIPYTLARFLQWSYIEPVNTIEYTTSQFEAGYSPA*
Ga0070717_100383446	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MMEFQTQARAFGTSVVFRVVAGQLATSLASQLPRRERWVFLLIDGRHSVADLACLTRRSEFDIPYTLARFLQWSYIEPVNTIEYTTSQFEAGYSPA*
Ga0070717_117961331	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTEFRTEERGFGASAVFRVVSAMPTTTLASQLPRRERWILLLIDGRRSVADLAHLTQRSQLDVALALARFLQWGYIEPVKAVEFRTSRFESTYDSA*
Ga0066696_110239662	3300006032	Soil	MMEFRTQERAFSASAVFRVAAGQLATSLASQLPRRERWVLLLINGRRSVADLARLTQRGELDIAYTLARFLQWGYIEPVSSRSEVLPRQVVSELG*
Ga0075028_1010011781	3300006050	Watersheds	MTELRAQERAFDATIVFRVVSTTPTNTLAGQLPRRERWILLLLDGKRCIADLAHLTQRSELDVAHTLARLLQSGYIKPLEENLS*
Ga0075014_1006314721	3300006174	Watersheds	MTEFRPKERAFDATLVFRVVSNLPTKTLADQLPRRERWILLLLDGKRCIADLSHLTQRSELDVTYTLARFLQQGYIEPLEENLSH*
Ga0066665_107191171	3300006796	Soil	MTEFSAQERVIDATLVFQVVSTIPAKTLAGQLPRRERWILLLLDGKRCIADLAHLTQRSELDVAYTLTSFLQQGYIEPVAEQPSQ*
Ga0066660_104224531	3300006800	Soil	MMEFRTQEKAPGASAVFRVAAGLLATSLASQLPRRERWVLLLIDGRRSVADLARLTQRGELDIAYTLARFLQSGYIEPANIVEYSSGQYANR*
Ga0066660_113969592	3300006800	Soil	TQERAFSASAVFRVAAGQLATSLASQLPRRERWVLLLIDGRRSVADLARLTQRGELDIAYTLARFLQWGYVEPVNMI*
Ga0099829_101507302	3300009038	Vadose Zone Soil	MMTEFRTQERGFGATAVFRVVSAMPTTTLARQLPRRERWILLLIDGRRSVADLAHLTQRNQLDVALALARFLQWGYIEPVRAVEFRTGGKESR*
Ga0099830_104405872	3300009088	Vadose Zone Soil	MGMEFRSQDSSFGASAVFQVVSGIPTTTLASQLPRRERWELLVVDGKRSVTDLARLTQRSELDVASMLARFLRWGYIELVHTAEFIP*
Ga0099830_108708171	3300009088	Vadose Zone Soil	MMTEFRTQERALGASAVFRVVFGTPITALVGQLPRRERWVLLLLDGRWTVADLARLTQRSELDVAYTLVRFLQLGYIEPIQSLQPLV*
Ga0099828_100616723	3300009089	Vadose Zone Soil	MFLRAQERAFDATLVFRVVSTTPTNTLAGQLPRLERWILLLLDGKRYIAHLAHLTQRSELDVASTLTSFLQQGSIVSVDEHPSQ*
Ga0099828_101559732	3300009089	Vadose Zone Soil	MGMEFRSQDSSFGASAVFQVVSGIPTTTLASQLPRRERWVLLLVDGKRSVADLARLTQRSELDVASMLARFLRWGYIELVHTAEFIP*
Ga0099828_115537452	3300009089	Vadose Zone Soil	MPEFRTPERAPGASAVFRVVPGVPTTTLAGQLPRRERWVLLLLDGKRTVADLARLTQRSELDVASTLARFLQWGSIERASMEQFRTTTGSRDAGSVSM*
Ga0099828_119756351	3300009089	Vadose Zone Soil	MMTEFRTQERGFGATAVFRVVSAMPTTTLARQLPRRERWILLLIDGRRSVADLAHLTQRNQLDVALALAR
Ga0099827_109571802	3300009090	Vadose Zone Soil	MPDFLTQERAFVATTVFRVAAGQPATTLASQLPRRERWVLLLLDGRRSITDLARLTRRTELDIASTLASFLHVGYIEPVSVEQFSTTKEDRYAGSV*
Ga0116214_10075143	3300009520	Peatlands Soil	MKRGRMTEFRAQERAFDATLVFRVVSTTPTKTLAGQLPRRERWILLLLDGKRCIADLAHLTQRSELDVAYTLASFLQQGYIEPLEENLSQ*
Ga0116222_13603172	3300009521	Peatlands Soil	MRRKRGRMTEFRAQKRAFDATLVFRVVSTTPTKTLAGQLPRRERWILLLLDGKRCIADLAHLTQRSELDVAYTLASFLQQGYIEPLEENLSQ*
Ga0116216_102035782	3300009698	Peatlands Soil	MRRKRGRMTEFRAQERAFDATLVFRVVSTTPTKTLAGQLPRRERWILLLLDGKRCIADLAHLTQRSELDVAYTLASFLQQGYIEPLEENLSQ*
Ga0116216_108931161	3300009698	Peatlands Soil	MTEFQAQERAFDATLVFRVVSTTPTKTLAGQLPRRERWILLLLDGKRCIADLAHLTQRSELDISYTLARFLQSGYIEPLDVNFSH*
Ga0126379_115791392	3300010366	Tropical Forest Soil	MKEFRAQERVLDATRVFQVASTISAKTLAGQLPRRERWILLLLDGKRCIADLAHLTQRSELDVASTLTKFLQQGYIESVDEHPSQ*
Ga0136449_1000316691	3300010379	Peatlands Soil	MTEFRAQERAFDATLVFRVVSTTPTKTLAGQLPRRERWILLLLDGKRCIADLAHLTQRSELDVAYTLASFLQQGYI
Ga0136449_1003905971	3300010379	Peatlands Soil	FQAQERAFDATLVFRVVSTTPTKTLAGQLPRRERWILLLLDGKRCIADLAHLTQRSELDVASTLTRFLQQGYIEPVDANLSR*
Ga0136449_1011989852	3300010379	Peatlands Soil	MRRIRGRMREFRPKDRAFDASIVFRVVSNIPTKTLAGQLPRRERWILLLLDGKRCIADLSHLTQRSELDVAYTLARFLQQGYIEPLEENLSH*
Ga0136449_1036915302	3300010379	Peatlands Soil	MTELRAQERAFDATLVFRIVSTIPTKTLAGQLSRRERWILLLLDGKRCIADLAHLTQRSELDVAYTLARFLQLGYVEPLDEQFSQIDQ*
Ga0136449_1039418831	3300010379	Peatlands Soil	MTEFQAQERAFDATLVFRVVSIIPTKTLAGQLPRRERWILLLLDGKRCIVDLAHLTQRSELDVAYTLARFLQSGYIEPLHENLSH*
Ga0137392_101542812	3300011269	Vadose Zone Soil	MMTEFRTQERGFGATAVFRVVSAMPTTTLARQLPRRERWILLLIDSRRSVADLAHLTQRNQLDVALALARFLQWGYIEPVRAVEFRTGGKESR*
Ga0137392_103077332	3300011269	Vadose Zone Soil	MFLRAQERAFDATLVFRVVSTTPTNTLAGQLPRLERWILLLLDGKRYIAHLAHLTQRSELDVASTLTSFLQRGSIVSVDEH
Ga0137391_106147651	3300011270	Vadose Zone Soil	VAERAFDASIVFRVVSTTPTNTLAGQLPRRERWILLLLDGKRCIADLAHLTQRSELDVAYTLARFLQSGSIEPLDENLSQ*
Ga0137389_116602052	3300012096	Vadose Zone Soil	MMTEFRTQERGFGATAVFRVVSAMPTTTLARQLPRRERWILLLIDGRRSVADLAHLTQRNQLDVALALARFLQWGYIEPVRAVEFRTGG
Ga0137388_100123031	3300012189	Vadose Zone Soil	SSFGASAVFQVVSGIPTTTLASQLPRRERWVLLLVDGKRSVADLARLTQRSELDVASMLARFLRWGYIELVHTAEFIP*
Ga0137388_118219882	3300012189	Vadose Zone Soil	MTEFRTQERALGASAVFRVVFGTPITALVGQLPRRERWVLLLLDGRWTVADLARLTQRSELDVAYTLVRFLQLGYIEPIQSLQPLV*
Ga0137364_104441932	3300012198	Vadose Zone Soil	MRRKRGRMTELRAQERAFDATLVFRVVSTIPAKTLAGQLPRRERWILLLLDGKRTIADLAHLTQRSEHDVVNMLNRFLQQGYIEPVEESLSQ*
Ga0137383_1000056617	3300012199	Vadose Zone Soil	MMLEFQTQARAFGASAVFRVVAGQLATSLASQLPRRERWVLLLIDGRRSVADLARLTRRSELDIAYTLARFLQWSYIEPVNTIEYTISQFEAGYSPA*
Ga0137383_100279702	3300012199	Vadose Zone Soil	MISVLRTQQSAFDASTTFRVAPSLQASALASQLPRRERWVLLLLDGKRSVATVARLTQRSELDVASTLARFLHLGYIEPVHAVESWQ*
Ga0137383_101251992	3300012199	Vadose Zone Soil	MPSPWVAERAFDATIVFRVVSTTPTNTLAGQLPRRERWILLLLDGKRCIADLAHLTQRSKLDVAYTLARFFQSGYIEPLGENLSQ*
Ga0137383_101330632	3300012199	Vadose Zone Soil	MMMEFRTQEKAPGASAVFRVAAGLLATSLASQLPRRERWVLLLIDGRRSVADLARLTQRGELDIAYTLARFLQSGYIEPANIVEYSSGQYANR*
Ga0137383_102989132	3300012199	Vadose Zone Soil	MTEFQAQERAFDATLVFRVVSTTPTKTLAGQLPRRERWILLLLDGKRCIADLAHLTQRSELDVAYTLTRFLQHGYIEPVAEYPSQ*
Ga0137365_105201012	3300012201	Vadose Zone Soil	MRRKRGRMTELRAQERAFDATLVFRVVSTTQTNTLAGQLSRRERWILLLLDGKRCIADLAHLTQRSELDVAYTLARFLQSGYIELVEESLSQ*
Ga0137365_110539651	3300012201	Vadose Zone Soil	MTEFRAQERVLDATLVFRIVSTIPTKTLVGQLPRRERWILLLLDGKRSIADLAHLTQRSEHDVVNMLNRFLQQGYIEPVEESLSQ*
Ga0137363_102335523	3300012202	Vadose Zone Soil	MMTEFRTQERGFGASAVFRVVSAMPTTTLASQLPRRERWILLLIDGRRSVTDLARLTQRSELDVASTLARFLRRGYIESVQSLQPLV*
Ga0137362_101885763	3300012205	Vadose Zone Soil	MTEFRTQERGFGASAVFRVVSAMATTTLASQLPRRERWILLLIDGRRSVTDLARLTQRSELDVASTLARFLRRGYIESVQSLQPLV*
Ga0137362_102892272	3300012205	Vadose Zone Soil	MPDFFTQERAFVATTVFRVAAGQPATTLASQLPRRERWVLLLLDGRRSITDLARLTRRTELDIASTLASFLHVGYIEPVSVEQFSTTKEERYAGSV*
Ga0137380_100349583	3300012206	Vadose Zone Soil	MMMEFRTQERALGASAVFRMAPGTLATSLASQLPRRERWVLLLIDGRRSVADLARLTQRGELDIASTLARFLQWGYIEPANMVELRTGGNGS*
Ga0137380_103417352	3300012206	Vadose Zone Soil	MIRKRGRMTELRAQERAFDATLVFRVVSITPTNTLAGQLLRRERWKLLLLDGKRCIANLAHLTQRSELDVASTLTRFLQQGSIEPVEESLSQ*
Ga0137379_102881452	3300012209	Vadose Zone Soil	MMMEFRTQERAPGASAVFRVAAGQLATSLASQLPRRERWVLLLLNGRRSVADLARLTQRGELDIAYTLARFLQWGLVEPVKTVEHTIGQF*
Ga0137379_109050282	3300012209	Vadose Zone Soil	MIRKRGRMTELRAQERAFDATLVFRVVSTTPTNTLAGQLPRRERWILLLLDGKRNVVDLAHLTQRSELDVAYTLARFLQSGYIEPVAEHSSQ*
Ga0137378_100054786	3300012210	Vadose Zone Soil	MMMEFQTQARAFGASAVFRVVAGQLATSLASQLPRRERWVLLLIDGRRSVADLARLTRRSELDIAYTLARFLQWSYIEPVNTIEYTISQFEAGYSPA*
Ga0137378_111165581	3300012210	Vadose Zone Soil	MTEFRAQERVIDATLVFQVVSTIPAKTLAGQLPRRERWILLLLDGKRCIADLAHLTQRSELDVAYTLTRFLQQG
Ga0137386_106399881	3300012351	Vadose Zone Soil	MTEYRAQEKAFDTTLVFQVVSTIPAKTLAGQLPRRERWILLLLDRKRCIADLGHLTQRSELDVASTLTRFLQQGSIEPVEESLSQ*
Ga0137384_100578773	3300012357	Vadose Zone Soil	MTEFRAQERVIDATLVFQVVSTIPAKTLAGQLPRRERWILLLLDGKRCIADLAHLTQRSELDVAYTLTRFLQQGYIE
Ga0137385_105237922	3300012359	Vadose Zone Soil	MRNRYVRVTFFASHVSYHDTLLFIRKRGLMKEFQAQVRAFDATLVFRVVSTTSTKTLAGQLPRRERWILLLLDGKRCIADLAHLTQRSELDVAYTLARFLQQGYIESLEENLSH*
Ga0137360_105849062	3300012361	Vadose Zone Soil	MMTEFRTQERGFGASAVFRVVSAMATTTLASQLPRRERWILLLIDGRRSVTDLARLTQRSELDVASTLARFLRRGYIESVQSLQPLV*
Ga0137390_104634082	3300012363	Vadose Zone Soil	MMTEFRTQERGFGASAVFRVVSAMPTTTLASQLPRRERWILLLIDGRRSVADLAHLTQRSQLDVALALARFLQWGYIEPVKAVEFRTSRFESTYDSA*
Ga0137390_117604032	3300012363	Vadose Zone Soil	MFLRAQERAFDATLVFRVVSTTPTNTLAGQLPRLERWILLLLDGKRYIAHLAHLTQRSELDVASTLTSFLQQGSIVS
Ga0137395_110394761	3300012917	Vadose Zone Soil	APGASAVFRVAAGLLATSLASQLPRRERWVLLLIDGRRSVADLARLTQRGELDIAYTLARFLQSGYNEPANIVEYSSGQYANR*
Ga0120170_10004858	3300014823	Permafrost	MTELRGQERAFNATIVFRVVSTTPTNTLAGQLPRRERWILLLLDGKRCIADLAHLTQRSELDVAHTLARLLQSGYIKPLEENLS*
Ga0182037_111869901	3300016404	Soil	MKEYRAQERVIDATRVFRVVSTISAKTLASQLPRRERWILLLLDGKRSIADLAHLTQRSELDVAYTITRFLQLGYIEPVAGHRS
Ga0182038_115969212	3300016445	Soil	MKEYRAQERVIDATRVFQVVSTISAKTLASQLPRRERWILLLLDGKRSIADLAHLTQRSELDVAYTITRFLQLRYIEPVAGHRS
Ga0187818_103400161	3300017823	Freshwater Sediment	MTEFQARERAFDATLVFRVVSTTPTKTLAGQLPRRERWILLLLDGKRCIADLAHLTQRSELDVAYTLARFLQSGYIEPLD
Ga0187803_102767302	3300017934	Freshwater Sediment	MTELRAQERAFDATFVFRVVSTTPTNALAGQLPRRERWILLLLDGKRCIADLAHLTQRSELDVAYTLARLLQSGYIKPIEENLSQ
Ga0187775_102464622	3300017939	Tropical Peatland	MKEFRAQEGVLDTTRVFQVVSTIPTTILAGQLPRRERWILLLLDGKRSIADLAHLTQRSELDVASTLTKFLQQGYIEPVAKHPSQ
Ga0187819_103698182	3300017943	Freshwater Sediment	MTEFQARERAFDATLVFRVVSTTPTKTLAGQLPRRERWILLLLDGKRCIADLAHLTQRSELDVAYTLARFLQSGYIEPLDANLSH
Ga0187776_104246771	3300017966	Tropical Peatland	MTEFRAQERVLEATLVFKVVSTIPAKTLAGQLPRRERWILLLLDGKRSIADLAHLTQRSKLDVAYTLARFLQSGYIEPIDENLSH
Ga0187780_107634531	3300017973	Tropical Peatland	MTEFHAQERVLDTTLVFRIAPTIPAKTLAEQLPRRERWILLLLDGKRSIADLAHLTQRSELDVAYTLTLFLQQGYIEPVAEHPSQ
Ga0187777_107089701	3300017974	Tropical Peatland	MSEFRAQERVLDATRVFQVASTIPTKTLAGELPRRERWILLLLDGKRSIADLAHLTQRSELDVASTLTKFLQQGYIEPVATHPSQ
Ga0187774_105857361	3300018089	Tropical Peatland	MTEYRAQERVLEATLVFKVVSTIPAKTLAGQLPRRERWILLLLDGKRSIADLAHLTQRSELDVAYTLARFLQQGFIEPLDENLSH
Ga0066662_104491372	3300018468	Grasslands Soil	MMEFRTQEKAPGASAVFRVAAGLLATSLASQLPRRERWVLLLIDGRRSVADLARLTQRGELDIAYTLARFLQSGYIEPANIVEYSSGQYANR
Ga0066662_124451081	3300018468	Grasslands Soil	TQERAFGTSAVFRVAPGTLATSLASQLPRREHWVLLLIDGRRSVADLARLTRRGELDIASTLARFLQWGYIEPANMVEFRADGNES
Ga0210405_108103522	3300021171	Soil	MELPYHGEPMFLRAQVRAFDATLIFRVVSTTPTNTLAGQLPRRERWILLLLDGKCYIADLAHLTQHSELDVAYTLTRFLQQGSIEPVEES
Ga0126371_113389101	3300021560	Tropical Forest Soil	MSEFRAQEKAFDATLVFQVVSTIPTKTLAGQLPRRERWILLLLDGKRSKADLAHLTQRSELDVASTLTRFLELGYIEPVAGHPSH
Ga0207653_101640091	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MEFQTQARAFGTSAVFRVVAGQLATSLASQLPRRERWVFLLIDGRHSVADLACLTRRSEFDIAYTLARFLQWSYIEPVNTIEYTTSQFEA
Ga0207684_1000123812	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTEFRAQERVIDSSLVFKVVSTIPAKTLAGQLPRRERWILLLLDGKRSIADLAHLTQRSEHDVAYTLTRFLQQGYIEPVAKHHSQ
Ga0207684_100095914	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MEFRSQERSFGASAVFQMVSGIPATTLASQLPRRERWILLLIDGRRSIADLAHLTQRSQLDVALALARFLQWGYIEAVDTRADGLGR
Ga0207684_100137654	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MMTEFRTQERGFGASAVFRVVSGLQAPTLASQLPRRERWILLLIDGRRSVTDLARLTQRNELDVALALARFLQWGYIEPINF
Ga0207684_101738971	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	PERWVIYHFDASTAFRVALGFQAAALANSLPRRERWVLLLLDGRRSVATVARLTQRSELDVASTPARFLHLGYIEPVHAVESRQ
Ga0207684_115879141	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTAFRAQESAFGASAVFQVISGTPITTLASHLPRRERWVLLLLDGRRTVADLARLTQRSEFDVASTLARFLQWGF
Ga0207646_1000850710	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MEFRTQERGFGASAVFRVVPGLQAAALASQLPRRERWILLLVDGRRSVATVARLTQRSELDVASTLAKFLHWGYIEPVQAVEHMQ
Ga0207646_105658971	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTEFRTQERVFGASAVFRVVSAMPTTTLASQLPRRESWILLLIDGRRSVADLARLTQRSQLDMALALARFLQWGYIEPVDKEED
Ga0209647_100123627	3300026319	Grasslands Soil	MPDFFTQERAFVATTVFRVAAGQPATTLASQLPRRERWVLLLLDGRRSITDLARLTRRTELDIASTLASFLHVGYIEPVSVEQFSTTKEE
Ga0209647_10025856	3300026319	Grasslands Soil	MTEFRTQERGFGASAVFRVVSAMPTTTLASHLPRRERWILLLIDGRRSVADLAHLTQRSQLDVALALARFLQWGYIEPVDKEED
Ga0209647_10454302	3300026319	Grasslands Soil	MTQFRTQQSAFDASSVFRVAPGLHAATIASRLPRRERWVLLLLDGKRSIADLARLTQRSELDVASTLARFLQRGFIESVNFLKPLV
Ga0209647_11130822	3300026319	Grasslands Soil	MEFQTQARAFGTSAVFRVVAGQLATSLASQLPRRERWVFLLIDGRHSVADLACLTRRSEFDIAYTLARFLQWSYIEPVNTIEYTTSQFEAGYSPA
Ga0209647_12536771	3300026319	Grasslands Soil	MEFRSQESSFGASAVFQVVSGIPTTTLASQLPRRERWVLLLVDGRRSVADLAHLTQRSQLDVAHTLARFLQWGYIEPIQSLQPLV
Ga0209647_13181951	3300026319	Grasslands Soil	MTEFRTQERGFGASAVFRVVSAMPTTTLASHLPRRERWILLLIDGRRSVADLAHLTQRSQLDVALALARFLQWGYIEPVKAVEFRTSRFESTYDSA
Ga0257180_10155401	3300026354	Soil	MPDFFTQERAFVATTVFRVAAGQPATTLASQLPRRERWVLLLLDGRRSITDLARLTRRTELDIASTLASFLHVGYIEPVSVEQFSTTKEERYAGSV
Ga0257176_10701422	3300026361	Soil	MPDFFTQERAFVATTVFRVAAGQPATTLASQLPRRERWVLLLLDGRRSITDLARLTRRTELDIASTLASFLHVGYIEPVSVEQFSTTKEERYA
Ga0257165_10387193	3300026507	Soil	MMTEFRTQERGFGASAVFRVVSAMPTTTLASQLPRRERWILLLIDGRRSVADLAHLTQRSQLDVALALARFLQWGYIEPVQTAEFRT
Ga0209648_1000029623	3300026551	Grasslands Soil	MTEFRTQERGFGASAVFRVVSAMPTTTLASHLPRRERWILLLIDGRRSVADLAHLTQRSQLDVALALARFLQWGYIEPVQTAEFRTKRYESG
Ga0209648_100678782	3300026551	Grasslands Soil	MMTQFRTQQSAFDASSVFRVAPGLHAATIASRLPRRERWVLLLLDGKRSIADLARLTQRSELDVASTLARFLQRGFIESVNFLKPLV
Ga0209648_101167432	3300026551	Grasslands Soil	MEFRSQDSSFGASAVFQVVSGIPTTTLASQLPRRERWVLLLVDGKRSVADLARLTQRSELDVASMLARFLRWGYIELVHTAEFIP
Ga0209648_102112431	3300026551	Grasslands Soil	MMTEFRTQERGFGATAVFRVVSAMPTTTLARQLPRRERWILLLIDGRRSVADLAHLTQRNQLDVALALARFLQWGYIEPVRAVEFRTGGKESR
Ga0209060_100841721	3300027826	Surface Soil	MMEFRTQERAPGASAVFRVAAGQLVTSLASQLPRRERWVLLLIDGRRSVAQVARLTQRSELDVASTLVKFLHRGYIEPVQAVEHMQ
Ga0209180_100137802	3300027846	Vadose Zone Soil	MTEFRTQERGFGATAVFRVVSAMPTTTLARQLPRRERWILLLIDGRRSVADLAHLTQRNQLDVALALARFLQWGYIEPVRAVEFRTGGKESR
Ga0209180_101146622	3300027846	Vadose Zone Soil	MLEFHTQERGFGASAVFRVVSAMPTTTLASNLPRRERWILLLIDGRRSVADLAHLTQRSQLDVALALARFLQWGYIEPVQAAEFRTERYENG
Ga0310038_100778192	3300030707	Peatlands Soil	MTEFRAQERAFDATLVFRVVSTTPTKTLAGQLPRRERWILLLLDGKRCIADLAHLTQRSELDVASTLTRFLQQGYIEPVAEHPFQKISSMWLTFLFTDLRGQQ
Ga0307374_1000792810	3300031670	Soil	MIGIRSHASSSGASAVFQVASGIPIATIARQLPRRERWILLLVDGKRSVTDLAHLTQRSELDVASTLVTFIQCGYIEPIHMLEPLV
Ga0306923_117056232	3300031910	Soil	MKEYRAQERVIDATRVFQVVSTISAKTLASQLPRRERWILLLLDGKRSIADLAHLTQRSELDVAYTITRFLQLGYIEPVAGHRS
Ga0311301_1001612823	3300032160	Peatlands Soil	MTEFRAQERAFDATLVFRVVSTTPTKTLAGQLPRRERWILLLLDGKRCIADLAHLTQRSELDVAYTLASFLQQGYIEPLEENL
Ga0311301_100575993	3300032160	Peatlands Soil	MTEFQAQERAFDATLVFRVVSTTPTKTLAGQLPRRERWILLLLDGKRCIADLAHLTQRSELDVASTLTRFLQQGYIEPVDANLSR
Ga0311301_1007988912	3300032160	Peatlands Soil	MTEFRAQERAFDATLVFRVVSTTPTKTLAGQLPRRERWILLLLDGKRCIADLAHLTQRSELDVAYTLASFLQQG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F070425

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences