Metagenome / Metatranscriptome Family F070419

Basic Information
Family ID	F070419
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	44 residues
Representative Sequence	MKRSLQQIAEAVGARLQGDGSVEVGSVASIESASKDDLVFVEE
Number of Associated Samples	110
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.49 %
% of genes near scaffold ends (potentially truncated)	98.37 %
% of genes from short scaffolds (< 2000 bps)	91.06 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Most Common Taxonomy
Group	Bacteria (65.041 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.634 % of family members)
Environment Ontology (ENVO)	Unclassified (29.268 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.789 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.27% β-sheet: 11.27% Coil/Unstructured: 77.46%
Feature Viewer

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Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF04613	LpxD	17.89
PF04012	PspA_IM30	5.69
PF04014	MazE_antitoxin	3.25
PF05016	ParE_toxin	2.44
PF13211	DUF4019	0.81
PF15975	Flot	0.81
PF01590	GAF	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG1044	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	Cell wall/membrane/envelope biogenesis [M]	17.89
COG1842	Phage shock protein A	Transcription [K]	11.38

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.04 %
Unclassified	root	N/A	34.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.04 %
Unclassified	root	N/A	34.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.04 %
Unclassified	root	N/A	34.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	50.41 %
Unclassified	root	N/A	34.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.44 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	36.59 %
Unclassified	root	N/A	34.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.81 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	36.59 %
Unclassified	root	N/A	34.96 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.81 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	36.59 %
Unclassified	root	N/A	34.96 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.81 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	36.59 %
Unclassified	root	N/A	34.96 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.81 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	36.59 %
Unclassified	root	N/A	34.96 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.81 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459017\|G14TP7Y01EYIGV	Not Available	611	Open in IMG/M
3300001175\|JGI12649J13570_1014323	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300001305\|C688J14111_10132099	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300001471\|JGI12712J15308_10172494	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
3300001593\|JGI12635J15846_10582526	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300001867\|JGI12627J18819_10411559	Not Available	551	Open in IMG/M
3300002245\|JGIcombinedJ26739_101134747	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300004080\|Ga0062385_10167365	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300004082\|Ga0062384_100161284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1283	Open in IMG/M
3300004082\|Ga0062384_100517976	Not Available	793	Open in IMG/M
3300004082\|Ga0062384_101116905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300004092\|Ga0062389_101221050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	937	Open in IMG/M
3300005533\|Ga0070734_10342658	Not Available	853	Open in IMG/M
3300005591\|Ga0070761_10166985	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300005602\|Ga0070762_10937480	Not Available	591	Open in IMG/M
3300005879\|Ga0075295_1014745	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300005994\|Ga0066789_10385432	All Organisms → cellular organisms → Bacteria → Proteobacteria	585	Open in IMG/M
3300006041\|Ga0075023_100426756	Not Available	580	Open in IMG/M
3300006174\|Ga0075014_100743682	Not Available	574	Open in IMG/M
3300006175\|Ga0070712_100524515	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300007788\|Ga0099795_10484701	Not Available	574	Open in IMG/M
3300009623\|Ga0116133_1055946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	979	Open in IMG/M
3300009624\|Ga0116105_1209462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300009639\|Ga0116122_1199459	All Organisms → cellular organisms → Bacteria → Acidobacteria	627	Open in IMG/M
3300009683\|Ga0116224_10483414	Not Available	590	Open in IMG/M
3300010043\|Ga0126380_10031019	All Organisms → cellular organisms → Bacteria	2701	Open in IMG/M
3300010379\|Ga0136449_101733044	Not Available	939	Open in IMG/M
3300010379\|Ga0136449_103586276	Not Available	589	Open in IMG/M
3300010398\|Ga0126383_13562413	Not Available	508	Open in IMG/M
3300012096\|Ga0137389_10833184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300012207\|Ga0137381_10383190	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300012357\|Ga0137384_10591202	Not Available	906	Open in IMG/M
3300012683\|Ga0137398_10353144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	996	Open in IMG/M
3300012927\|Ga0137416_12050387	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300014168\|Ga0181534_10707452	Not Available	589	Open in IMG/M
3300014169\|Ga0181531_10520205	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300016445\|Ga0182038_10939370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300017934\|Ga0187803_10021982	All Organisms → cellular organisms → Bacteria	2541	Open in IMG/M
3300017975\|Ga0187782_10988758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300018003\|Ga0187876_1033034	All Organisms → cellular organisms → Bacteria → Acidobacteria	2285	Open in IMG/M
3300018034\|Ga0187863_10011236	All Organisms → cellular organisms → Bacteria → Acidobacteria	5779	Open in IMG/M
3300018043\|Ga0187887_10469311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300018058\|Ga0187766_10638246	Not Available	730	Open in IMG/M
3300018085\|Ga0187772_10665237	Not Available	745	Open in IMG/M
3300018090\|Ga0187770_11494114	Not Available	550	Open in IMG/M
3300020199\|Ga0179592_10522142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300020580\|Ga0210403_10076303	All Organisms → cellular organisms → Bacteria → Acidobacteria	2695	Open in IMG/M
3300020582\|Ga0210395_10160815	All Organisms → cellular organisms → Bacteria → Acidobacteria	1678	Open in IMG/M
3300021171\|Ga0210405_10495214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	958	Open in IMG/M
3300021181\|Ga0210388_11142292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300021401\|Ga0210393_10119766	All Organisms → cellular organisms → Bacteria → Acidobacteria	2103	Open in IMG/M
3300021401\|Ga0210393_10565843	All Organisms → cellular organisms → Bacteria → Acidobacteria	928	Open in IMG/M
3300021402\|Ga0210385_11203060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300021403\|Ga0210397_10207559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1403	Open in IMG/M
3300021404\|Ga0210389_10135635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1905	Open in IMG/M
3300021405\|Ga0210387_10052259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3294	Open in IMG/M
3300021407\|Ga0210383_11427862	Not Available	575	Open in IMG/M
3300021420\|Ga0210394_10928115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	756	Open in IMG/M
3300021420\|Ga0210394_11318128	Not Available	616	Open in IMG/M
3300021479\|Ga0210410_10473293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1120	Open in IMG/M
3300021559\|Ga0210409_11552067	Not Available	538	Open in IMG/M
3300022509\|Ga0242649_1022874	Not Available	759	Open in IMG/M
3300022712\|Ga0242653_1026922	Not Available	839	Open in IMG/M
3300023056\|Ga0233357_1022719	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300024227\|Ga0228598_1006514	All Organisms → cellular organisms → Bacteria	2414	Open in IMG/M
3300024227\|Ga0228598_1107134	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300025501\|Ga0208563_1038083	All Organisms → cellular organisms → Bacteria → Acidobacteria	1097	Open in IMG/M
3300025604\|Ga0207930_1097751	Not Available	673	Open in IMG/M
3300026217\|Ga0209871_1013873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1500	Open in IMG/M
3300026854\|Ga0207727_105870	All Organisms → cellular organisms → Bacteria	1256	Open in IMG/M
3300027575\|Ga0209525_1110708	Not Available	646	Open in IMG/M
3300027591\|Ga0209733_1177948	Not Available	505	Open in IMG/M
3300027629\|Ga0209422_1125141	Not Available	586	Open in IMG/M
3300027648\|Ga0209420_1105897	All Organisms → cellular organisms → Bacteria → Acidobacteria	796	Open in IMG/M
3300027652\|Ga0209007_1033136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1325	Open in IMG/M
3300027767\|Ga0209655_10216437	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300027783\|Ga0209448_10038757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1600	Open in IMG/M
3300027826\|Ga0209060_10241745	Not Available	828	Open in IMG/M
3300027842\|Ga0209580_10063153	Not Available	1747	Open in IMG/M
3300027853\|Ga0209274_10122946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1294	Open in IMG/M
3300027862\|Ga0209701_10593123	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300027874\|Ga0209465_10499304	Not Available	607	Open in IMG/M
3300027879\|Ga0209169_10098815	All Organisms → cellular organisms → Bacteria	1510	Open in IMG/M
3300027884\|Ga0209275_10168621	Not Available	1169	Open in IMG/M
3300027889\|Ga0209380_10656461	Not Available	604	Open in IMG/M
3300027895\|Ga0209624_10523241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789	Open in IMG/M
3300027895\|Ga0209624_10765837	Not Available	635	Open in IMG/M
3300027908\|Ga0209006_10071052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3103	Open in IMG/M
3300028017\|Ga0265356_1004821	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1634	Open in IMG/M
3300028536\|Ga0137415_10654404	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	863	Open in IMG/M
3300028781\|Ga0302223_10307965	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300028882\|Ga0302154_10618756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300028906\|Ga0308309_10321928	All Organisms → cellular organisms → Bacteria → Acidobacteria	1312	Open in IMG/M
3300029903\|Ga0247271_100179	All Organisms → cellular organisms → Bacteria → Acidobacteria	17793	Open in IMG/M
3300029910\|Ga0311369_10249760	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300029993\|Ga0302304_10105892	Not Available	1075	Open in IMG/M
3300030007\|Ga0311338_10830676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	917	Open in IMG/M
3300030011\|Ga0302270_10688308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300030053\|Ga0302177_10151743	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1305	Open in IMG/M
3300030053\|Ga0302177_10427079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300030490\|Ga0302184_10104580	All Organisms → cellular organisms → Bacteria → Acidobacteria	1276	Open in IMG/M
3300030520\|Ga0311372_11190166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	978	Open in IMG/M
3300030520\|Ga0311372_11567450	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	806	Open in IMG/M
3300030659\|Ga0316363_10126330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1114	Open in IMG/M
3300030862\|Ga0265753_1101972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300031057\|Ga0170834_105423058	Not Available	607	Open in IMG/M
3300031231\|Ga0170824_110522886	Not Available	506	Open in IMG/M
3300031446\|Ga0170820_16271462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300031708\|Ga0310686_114395509	All Organisms → cellular organisms → Bacteria → Acidobacteria	1269	Open in IMG/M
3300031715\|Ga0307476_10541221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300031716\|Ga0310813_10380402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1210	Open in IMG/M
3300031718\|Ga0307474_10251788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1353	Open in IMG/M
3300031754\|Ga0307475_11313873	Not Available	560	Open in IMG/M
3300031823\|Ga0307478_10064395	Not Available	2754	Open in IMG/M
3300031823\|Ga0307478_10456857	Not Available	1062	Open in IMG/M
3300031823\|Ga0307478_11674616	Not Available	524	Open in IMG/M
3300032160\|Ga0311301_12276194	Not Available	618	Open in IMG/M
3300032515\|Ga0348332_10779824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	984	Open in IMG/M
3300032515\|Ga0348332_12997234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300032805\|Ga0335078_11664181	Not Available	702	Open in IMG/M
3300032805\|Ga0335078_12574558	Not Available	523	Open in IMG/M
3300032828\|Ga0335080_10449972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1375	Open in IMG/M
3300033405\|Ga0326727_10767915	Not Available	752	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.75%
Host-Associated	Host-Associated	2.44%
Engineered	Engineered	0.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.30%
Aquatic	Environmental → Aquatic	15.45%
Plants	Host-Associated → Plants	2.44%
Solid Waste	Engineered → Solid Waste	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.92%
Freshwater	Environmental → Aquatic → Freshwater	13.82%
Peat	Environmental → Terrestrial → Peat	9.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.44%
Sediment	Environmental → Aquatic → Sediment	1.63%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.63%
Grass	Engineered → Solid Waste → Grass	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.28%
Loam	Environmental → Terrestrial → Soil → Loam	19.51%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.63%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.81%
Composting	Engineered → Solid Waste → Grass → Composting	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.89%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.50%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.63%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.63%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.63%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.81%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.81%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.32%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.32%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.69%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.88%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.06%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.25%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.25%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.44%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.44%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.44%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.44%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.63%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.63%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.63%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.63%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.81%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.81%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.81%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300001175	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005879	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022509	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023056	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025501	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150 (SPAdes)	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026854	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 48 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028017	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028781	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029903	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Fen703	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_00883490	2170459017	Switchgrass, Maize And Mischanthus Litter	MKCSLQQIAEALGIRLIGDSSLHVTGVASIESASADDLV
JGI12649J13570_10143232	3300001175	Forest Soil	MKRTLQEIAVAIEARLQGDGSVPVSGVASILSASAVELVFVEEEKYL
C688J14111_101320991	3300001305	Soil	MKRSLQQISDSVGARLIGDGSVEILSLASIESAGPSDLVFIDNQ
JGI12712J15308_101724941	3300001471	Forest Soil	VKRKLQEIAEAVGARLQGDGNLEVSGVASIASASAYDLVFVEDG
JGI12635J15846_105825261	3300001593	Forest Soil	MKRSLLQIAEAIEARVEGDGSIEVAGVASIGSASRQDLVFVE
JGI12627J18819_104115592	3300001867	Forest Soil	MKRSLDQIAAAVGARLLGEGRVEVSSVASIQSASLADLVFVEDE
JGIcombinedJ26739_1011347473	3300002245	Forest Soil	MKRSLQEIAEAVEARLQGDGSVEVEGVASTGSASKHDLVFV
Ga0062385_101673651	3300004080	Bog Forest Soil	MKRSLQQIAEAVGARLIGEGRVEVSAVASLESASPDDLIFVEDEKHLA
Ga0062384_1001612841	3300004082	Bog Forest Soil	MKRSLQEIAEAVEARLQGDGSVEVDDVASIGSASKHDLVFVEEEK
Ga0062384_1005179762	3300004082	Bog Forest Soil	MKRSLQEIAEAVGVRLVGDGRVEVSGVASIESASKDDLVFVED
Ga0062384_1011169051	3300004082	Bog Forest Soil	MKRSLQQIAEAVEARLEGDGSVEIGGVASIGSASPHDLVFVEDEK
Ga0062389_1012210503	3300004092	Bog Forest Soil	MKRSLREIAEAVNARLHGDGSVEVGGVASIGSASQHDLVFV
Ga0070734_103426582	3300005533	Surface Soil	MKRPLKQIADALGARLTGPVHGEASGVASIESASNEDLVFVE
Ga0070761_101669854	3300005591	Soil	MKRSLQEIAEAVEARLHGDGKVEVEGVASIGSASKHDLVFVE
Ga0070762_109374801	3300005602	Soil	MGRSLRKIAEAVGARLQGDGELEFSGVASIASASPDNLVF
Ga0075295_10147451	3300005879	Rice Paddy Soil	MKRSLEEIAAALGLRLFGEPGLPISGVASIESACSEDLVFVENEKHL
Ga0066789_103854322	3300005994	Soil	MKRTLQQIAEAVGARLLGDGRTEVSAVASMESAAAGDIVFVEDEKHLAA
Ga0075023_1004267562	3300006041	Watersheds	MKRSLQEIAEAVGARLIGNGRVEVSAVASIQSASRDDLVFVEDEKHLGGA
Ga0075014_1007436822	3300006174	Watersheds	MRSLQQIADTLEARVIGDGQVELTGVASIGSASPQDLVFVDEAKHFSAAVQSP
Ga0070712_1005245151	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKRSLQQIAEAVGARLIGDGRTLVSGVASLASASSGDL
Ga0099795_104847011	3300007788	Vadose Zone Soil	MKRSLREIAEAVEARLQGDGSLALDGLASIHSASKNDLVFVEEEKYL
Ga0116133_10559461	3300009623	Peatland	MKRTLQQIAESIGARLQGDGDVQVERVASLASACALDLVFVEEEKYLSR
Ga0116105_12094623	3300009624	Peatland	MKRSLRQIAEVVEARLQGDGSVEIEGVASIGSASPLDLVFVEE
Ga0116122_11994592	3300009639	Peatland	MKRSLQEIAEALEVGVHGDGSVQVSGVASMASASASD
Ga0116224_104834142	3300009683	Peatlands Soil	MKRSLQQIAQAVGARLIGEGSAEVSAVASMESATPE
Ga0126380_100310197	3300010043	Tropical Forest Soil	MKRSLKQIADALGARLIGPDQAEVSGVASIESASSTDLAF
Ga0136449_1017330442	3300010379	Peatlands Soil	MKRSLQQIAEAVGARLIGEGRAEVSAVASMESATP
Ga0136449_1035862761	3300010379	Peatlands Soil	MKRTVREIAEAVEARLQGDGSVQVSGVASIASASADDLV
Ga0126383_135624131	3300010398	Tropical Forest Soil	MKRSLKQIADAVGARLVGSDQAEIGSVASIESASSNDLVFVEDEKHL
Ga0137389_108331843	3300012096	Vadose Zone Soil	MKRSLQQIADAVAARLCGDGAVQVSGVASVASARSEDVVFVEERKHL
Ga0137381_103831903	3300012207	Vadose Zone Soil	MKRSLQQIADALGIRLIGGPGLQVGGGASIESACSVDLVFVEDE
Ga0137384_105912021	3300012357	Vadose Zone Soil	MKVSLHKIAEAVGARLIGEGRGEVSGVASMESATPQDL
Ga0137398_103531441	3300012683	Vadose Zone Soil	MKRSLREIAEAVEARLQGDGSLAVDGVASIHSASKNDLVFVEEEKYLSR
Ga0137416_120503871	3300012927	Vadose Zone Soil	MKRSLQQIAEAVGARLHGDGNVEVESVASIASASRHDLVFVED
Ga0181534_107074521	3300014168	Bog	MKRPLQQIAEGVGARLIGDGGIAVTGVASMQSAGPDDLVFVEDEKHL
Ga0181531_105202053	3300014169	Bog	MKRKLLQMAELVGARLQGDGSVLVGGVASIASATP
Ga0182038_109393701	3300016445	Soil	MKRSLHAIAEALEVRLIGDGASEVSGVASLGSASRQDIV
Ga0187803_100219828	3300017934	Freshwater Sediment	MKRSLQQVADAVAARLVGDGNVEVSGVGSIESGGAEDLIFVEDPK
Ga0187782_109887582	3300017975	Tropical Peatland	MKRSLKELAESLGARLLGNSQAEISGVASIEGASAQDLVFVEDEKH
Ga0187876_10330344	3300018003	Peatland	MKRTLQQIAEAVEACLQGDPSVQVSSVASVASASPDDLVFVE
Ga0187863_1001123610	3300018034	Peatland	MKRSLQHIADAVGARLIGEGRVEVSAVASMESASPEDLVFVDDEKHLAAALQ
Ga0187887_104693111	3300018043	Peatland	MCVVCYRVGAMKRSLQQIAEAVEARVEGDGNVEVSGVASIGSASRQDLVF
Ga0187766_106382462	3300018058	Tropical Peatland	MKGRVTPRTLQQIAEATGARLVGDGSVEVSGVASIESASAGDVVFVEDEK
Ga0187772_106652371	3300018085	Tropical Peatland	MNGRTTPRTLRLIAEATGARLVGDGSVEVSGVASIQSASQDD
Ga0187770_114941142	3300018090	Tropical Peatland	MKSQGTPRSLQEIAETLGARLIGDGSIEVSRVASIESAAP
Ga0179592_105221421	3300020199	Vadose Zone Soil	MKRSLREIAEAVEARLQGDGNLAVDGLASIHSASKSDLVFVE
Ga0210403_100763036	3300020580	Soil	VSSLQQIADALGARLIGDGRMQVRAVASIESATPEDL
Ga0210395_101608151	3300020582	Soil	MKRSLQEIAEAVEARLQGDGKVEVEGVASIGSASKCDLVFVEEEKYLTRALQSG
Ga0210405_104952141	3300021171	Soil	MKRSLQEIAEAVEARLQGDGKVEVEGVASIGSASK
Ga0210388_111422921	3300021181	Soil	MKRSLQQIAEAVGARLQGDGSVEVGSVASIESASKDDLVFVEE
Ga0210393_101197667	3300021401	Soil	MKRSLQEIAEAVEARLQGDGKVEVEGVASIGSASKCDLVFV
Ga0210393_105658432	3300021401	Soil	VKRKLQEIAEALGARLQGDGSAEVGGVASIASASALDLVFVEDGKYLSQALQSG
Ga0210385_112030603	3300021402	Soil	MKRSLREIAEAVGARLQGDGSVEIECVASIESASPRDVVFVADEMR
Ga0210397_102075594	3300021403	Soil	MKRSLKQIAEAVGAHLLGDGRAEVGAVASMDSATPQDLVFVDDEKHLSVALRS
Ga0210389_101356351	3300021404	Soil	MKRSLQQIAEAVGARLIGEGRIEVSAVASIESASAEDLVFVE
Ga0210387_100522591	3300021405	Soil	MKRSLQEIAGAVEVRLQGDPSVQVSGVASIASATQDDLVFVE
Ga0210383_114278622	3300021407	Soil	MKRSLQEIAETVGARLMGDGRAEVSAVASIESATPE
Ga0210394_109281151	3300021420	Soil	MKRSLQHIAEAVGARLIGEGRVEVSAVASIESASPSDLV
Ga0210394_113181281	3300021420	Soil	MKRSLQQIAEAVGARLIGDGRAEVSAVASIESATPS
Ga0210410_104732932	3300021479	Soil	VQHIAEAVGARLIGEGRVEVSAVASIASATPSDLAFVEDEKHLAAALRSR
Ga0210409_115520671	3300021559	Soil	MKRSVQHIAEAVGARLIGEGRVEVSAVASLESATPEDLVFVEDEK
Ga0242649_10228741	3300022509	Soil	MKRSLQQIADAVGARLIGEGGPEVRRLEVSGVSSPESAT
Ga0242653_10269222	3300022712	Soil	MKRSLQQIAEAVGARLIGDGRAEMSAVASIESATPEDIVFVED
Ga0233357_10227191	3300023056	Soil	MKRSLQQIAEAVGARLRGDGSVEIGGVASIGSALQH
Ga0228598_10065141	3300024227	Rhizosphere	MKRSLQQIAEAVEARLQGDGSVKVGGVASIGSASEHDLVFVE
Ga0228598_11071342	3300024227	Rhizosphere	MKRTLQEIAEQLEVRLQGDGSARVSGVASLASAAAGDLVFV
Ga0208563_10380832	3300025501	Peatland	MKRSLQEIAEALEVGVHGDGSVQVSGVASMASASASDLVFVEEE
Ga0207930_10977512	3300025604	Arctic Peat Soil	MKRSLQQIAEAVGARLIGDGHSEVGAVASMESATPQDLVFV
Ga0209871_10138734	3300026217	Permafrost Soil	MKHSLQQISEAVGVRLIGDGRVEVGGVASIESASQDDLV
Ga0207727_1058701	3300026854	Tropical Forest Soil	MKRSVQQIADAVGARLTGDSSVEVTGVASMESASQSEIVFVEDEKHLAAARQS
Ga0209525_11107082	3300027575	Forest Soil	MKRSLEQIAEAVGARLIGEGRVEVSAVASIESASADDLVFVEDEKHLDEAL
Ga0209733_11779481	3300027591	Forest Soil	MNRSLQEIAQTVEARLQGDGSLQVGGVASIGSASENDLVFVEEEKYLSR
Ga0209422_11251412	3300027629	Forest Soil	MKRPVDQIAAAVGARLLGEGRVEVSSVASIESASHADLVFVEDEKHLA
Ga0209420_11058971	3300027648	Forest Soil	MKRTLQEIAVAIEARLQGDGSVPVSGVASILSASAVELVFVEEEKYLSRALQSDAGA
Ga0209007_10331361	3300027652	Forest Soil	MKRSLQEIAEAVEARLQGDGSVEVEGVASTGSASKHDLVFVE
Ga0209655_102164371	3300027767	Bog Forest Soil	MKRSLQEIAEAVEARLHGDGKVAVAGVASIGSASSCDLV
Ga0209448_100387574	3300027783	Bog Forest Soil	MKRSLEQIAGALGARLVGDRGVEVAGVASMASASKDDLVFVEDE
Ga0209060_102417451	3300027826	Surface Soil	MKRPLKQIADALGARLTGPVHGEASGVASIESASNEDLVFVEDEK
Ga0209580_100631531	3300027842	Surface Soil	MKRTLQQIAEAVGARVVGDARREVSGLSSLDSASADDVVFVEDEKH
Ga0209274_101229464	3300027853	Soil	MKRSLQEIAEAVEARLHGDGKVEVEGVASIGSASKHDLVFVEEEKYLARALQPGAG
Ga0209701_105931233	3300027862	Vadose Zone Soil	MKRSLQQIAEAVGARLLGDGSVEVESVASIASASPHDLVF
Ga0209465_104993041	3300027874	Tropical Forest Soil	MKRSLQQIAEAVGARLIGDASREVNGVASLESASERDLVFV
Ga0209169_100988153	3300027879	Soil	MKRSLQEIAEALEVRLLGEGSVEVSAVASLASASPHDLVFVEEQKY
Ga0209275_101686213	3300027884	Soil	MKRSLQQIAEAVGARLIGEGGPEVRRLEVSGVSSPESATPDDLVFVDDDKHL
Ga0209380_106564612	3300027889	Soil	MKRSLQQIAEAVGARLIGEGGPEVRRLEVSGVSSPESATPDDLV
Ga0209624_105232412	3300027895	Forest Soil	MKRSLEQIAEAVGARLIGEGRVEVSAVASIESASADDL
Ga0209624_107658371	3300027895	Forest Soil	MKRSLQYIAEAVGARLLGDGRVEISGVASIASASPA
Ga0209006_100710521	3300027908	Forest Soil	MKRSLQHIAEAVRARLIGDGRVEISGVASIASASPADLVF
Ga0265356_10048211	3300028017	Rhizosphere	MKRSLRQIAEAVEGRLQGGDERVEIEGVASIGAASARDLVF
Ga0137415_106544041	3300028536	Vadose Zone Soil	MKRSLQQIAEAVGARLHGDGNVEVESVASIASASRHDLVFV
Ga0302223_103079652	3300028781	Palsa	MRHKLQEIAEAVGARLEGDGSVEVGGVASIASASASEIV
Ga0302154_106187562	3300028882	Bog	MCVVCYRVGAMKRSLQQIAEAVEARVEGDGNVEVSGVASIGSASKQNLVFVED
Ga0308309_103219281	3300028906	Soil	VKRKLQEIAEALGARLQGDGSAEVGGVASIASASALDLVFVED
Ga0247271_10017912	3300029903	Soil	MKRSLQQIAEAVGARLIGDSHLEVSAVASTESATPSDLVFVXXXXX
Ga0311369_102497604	3300029910	Palsa	MKRSLQQIAEAVDACVQGDGSVEVGGVASIGSASQHDLVFVE
Ga0302304_101058921	3300029993	Palsa	MKRSLQQIAEAVDACVQGDGSVEVGGVASIGSASQHDLVCVE
Ga0311338_108306762	3300030007	Palsa	MKRSLQQIAQAVGARLEGDGSVEVAGVASIASASPQDLVFVED
Ga0302270_106883082	3300030011	Bog	MCVVCYRVGAMKRSLQQIAEAVEARVEGDGNVEVSGVASIGSASKQNLVFVEDEK
Ga0302177_101517431	3300030053	Palsa	MKRSLQQIAEAVGARLLAGGAVEVSGVASIGTAGPEHLVFVDDQKHLE
Ga0302177_104270791	3300030053	Palsa	MKRSLQQIAEAVDARLQGDGSVEVGGVASIGSASEHDLVFVEEE
Ga0302184_101045801	3300030490	Palsa	MRHKLQEIAEAVGARLEGDGSVEVGGVASIASASASEIVFVEDEKYLS
Ga0311372_111901661	3300030520	Palsa	MSGLCYRVGAMKRSLQQIAEAVDARLQGDGRVEVGGVASIGSASQHDLVFVEEEKYLLRALESATGAVI
Ga0311372_115674503	3300030520	Palsa	MKRSLQQIAEAVGARLLAGGAVEVSGVASIGTAGP
Ga0316363_101263301	3300030659	Peatlands Soil	MKRSLLQIAKAVEARLQGDGSVEVEGVASIGSASPHDL
Ga0265753_11019721	3300030862	Soil	MSVLCDTVGAMKRSLQQIAEAVDARLQGDGSVEVGRVASISSASQHDLVFVEEEKYLQR
Ga0170834_1054230583	3300031057	Forest Soil	MKRSLQEIAEAVGARLQGDGSLQVGGVASIGAASKNDLVFVEEEK
Ga0170824_1105228862	3300031231	Forest Soil	VGARKRSLQQIAEAVGARLIGEGSVEVSAVAGSESATPDDLS
Ga0170820_162714622	3300031446	Forest Soil	MKRSLHQIAEAVGARLLGEGRVEVSAVASIASATPDDLVFVDDAKHLA
Ga0310686_1143955091	3300031708	Soil	MEQIKTRTLREIAEAVDAHLHGDGNVQVSGVASVESAAAGDLVFVEN
Ga0307476_105412211	3300031715	Hardwood Forest Soil	MKRSLQQIANAVGARLIGPGLGEVSGVASIESASAADLVFVEDEKHLA
Ga0310813_103804023	3300031716	Soil	MKCSLQHIAEALGMRLIGDSSLHVTGVASIESASAADLVFVEDEKHLGHALQS
Ga0307474_102517884	3300031718	Hardwood Forest Soil	MKRSLRQIAEAVEARLQGDGGVEVWGVASIGSASEHDLVFVEEEK
Ga0307475_113138732	3300031754	Hardwood Forest Soil	MKRSVQHIAEAVGARLIGEGRVEVSAVASLESATPEDLVFVEDEKHLA
Ga0307478_100643956	3300031823	Hardwood Forest Soil	MKRSLRDISDAVEARLEGDGSLQLQGVASIDSASENDLVFVEEEKYFPAALKC
Ga0307478_104568573	3300031823	Hardwood Forest Soil	MRSLQQVAATIDARLEGDSGVEVGGVASLGSASKYDLVFV
Ga0307478_116746162	3300031823	Hardwood Forest Soil	MKRSLQQIAEAVGVRLIGDGSAEVSGVASIGSATPDDLVFVEDE
Ga0311301_122761942	3300032160	Peatlands Soil	MKHQVKPRSLHEIAEAVGARLIGDGHIAVTGVASIESAAQEDLVFVEDEKHLAAALR
Ga0348332_107798241	3300032515	Plant Litter	MKRSLQHIAEAVGARLIGEGRVEVSAVASIESASPSDLVFVEDEKHLP
Ga0348332_129972341	3300032515	Plant Litter	MKRSLQEIADAVGAHLCGDGSVEIGGVASIGSASQHDLVF
Ga0335078_116641812	3300032805	Soil	MKRSLREIADALGARLIGDGQVEVGAVASVESATRGDLIFVEDEKHLNAAD
Ga0335078_125745581	3300032805	Soil	MKRSLQQIADAVGARLLGDKGEVAGVASIASATPEDLVFV
Ga0335080_104499721	3300032828	Soil	MKVASRQIAEATGARLIGPGDVEISGIASFESATAQDLVFVENEKH
Ga0326727_107679152	3300033405	Peat Soil	MKRSVRQIADAVGARLLGGDSIAVGSVEVSGVSSLESASPEDLVFVDDDKHLAAALQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070419

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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