Metagenome / Metatranscriptome Family F070415

Overview

Basic Information

• Family ID: F070415
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 123
• Average Sequence Length: 40 residues
• Representative Sequence: PIPVGLGAALAISLAATIYLGVLPGRVLDYASRSVVELLR
• Number of Associated Samples: 113
• Number of Associated Scaffolds: 123

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 98.37 %
• % of genes from short scaffolds (< 2000 bps): 89.43 %
• Associated GOLD sequencing projects: 111
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (66.667 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (8.130 % of family members)
• Environment Ontology (ENVO): Unclassified (19.512 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (50.407 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Transmembrane (alpha-helical)
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 51.47%
  β-sheet: 0.00%
  Coil/Unstructured: 48.53%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF00137	ATP-synt_C	14.63
PF00005	ABC_tran	4.88
PF00924	MS_channel	4.88
PF00119	ATP-synt_A	3.25
PF00578	AhpC-TSA	2.44
PF09861	Lar_N	1.63
PF12698	ABC2_membrane_3	0.81
PF12867	DinB_2	0.81
PF01553	Acyltransferase	0.81
PF00528	BPD_transp_1	0.81
PF01740	STAS	0.81
PF02371	Transposase_20	0.81
PF03737	RraA-like	0.81
PF02566	OsmC	0.81
PF12730	ABC2_membrane_4	0.81
PF07609	DUF1572	0.81
PF09527	ATPase_gene1	0.81
PF00571	CBS	0.81
PF00300	His_Phos_1	0.81
PF00072	Response_reg	0.81
PF14815	NUDIX_4	0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0636	FoF1-type ATP synthase, membrane subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K	Energy production and conversion [C]	14.63
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	4.88
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	4.88
COG0356	FoF1-type ATP synthase, membrane subunit a	Energy production and conversion [C]	3.25
COG0684	RNA degradosome component RraA (regulator of RNase E activity)	Translation, ribosomal structure and biogenesis [J]	0.81
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.81
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.81
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.81

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.67 %
Unclassified	root	N/A	33.33 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.67 %
Unclassified	root	N/A	33.33 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.67 %
Unclassified	root	N/A	33.33 %

Level 4

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	55.28 %
Unclassified	root	N/A	33.33 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.63 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	26.83 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	26.02 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	26.02 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.69 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	0.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	5.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.69 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	1.63 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1.63 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.69 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.25 %
unclassified Candidatus Sulfotelmatobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter	1.63 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	0.81 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.69 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1.63 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1.63 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	0.81 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000567|JGI12270J11330_10178436	Not Available	754
3300003218|JGI26339J46600_10131377	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	593
3300004092|Ga0062389_101523616	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	852
3300004152|Ga0062386_101632659	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	538
3300004799|Ga0058863_11350039	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	589
3300005177|Ga0066690_10442298	All Organisms → cellular organisms → Bacteria → Acidobacteria	880
3300005332|Ga0066388_100646666	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1673
3300005366|Ga0070659_101331498	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	637
3300005434|Ga0070709_10616740	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	837
3300005439|Ga0070711_101826872	Not Available	533
3300005457|Ga0070662_101893075	Not Available	515
3300005467|Ga0070706_100044120	All Organisms → cellular organisms → Bacteria	4119
3300005529|Ga0070741_11475564	All Organisms → cellular organisms → Bacteria	562
3300005534|Ga0070735_10438118	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	781
3300005542|Ga0070732_10981802	Not Available	516
3300005553|Ga0066695_10312648	All Organisms → cellular organisms → Bacteria → Acidobacteria	989
3300005614|Ga0068856_100547536	Not Available	1178
3300005897|Ga0075281_1047708	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	666
3300005897|Ga0075281_1090523	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	520
3300005903|Ga0075279_10075404	All Organisms → cellular organisms → Bacteria	596
3300005921|Ga0070766_10144160	All Organisms → cellular organisms → Bacteria → Acidobacteria	1452
3300005993|Ga0080027_10137597	All Organisms → cellular organisms → Bacteria	932
3300006028|Ga0070717_10034111	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4111
3300006050|Ga0075028_100214987	All Organisms → cellular organisms → Bacteria → Acidobacteria	1043
3300006059|Ga0075017_101322715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	566
3300006175|Ga0070712_100012689	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	5363
3300006755|Ga0079222_10020425	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2643
3300006755|Ga0079222_11819923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	590
3300006881|Ga0068865_100854930	Not Available	788
3300006904|Ga0075424_100298714	All Organisms → cellular organisms → Bacteria	1714
3300007265|Ga0099794_10753321	Not Available	520
3300009137|Ga0066709_103173853	Not Available	600
3300009137|Ga0066709_104319751	All Organisms → cellular organisms → Bacteria → Acidobacteria	518
3300009143|Ga0099792_11203889	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514
3300009156|Ga0111538_11984734	All Organisms → cellular organisms → Bacteria → Acidobacteria	732
3300009522|Ga0116218_1481319	Not Available	553
3300009792|Ga0126374_10695722	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	764
3300009839|Ga0116223_10235381	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1109
3300009839|Ga0116223_10408936	Not Available	797
3300010046|Ga0126384_11964026	Not Available	559
3300010329|Ga0134111_10037319	All Organisms → cellular organisms → Bacteria → Acidobacteria	1718
3300010339|Ga0074046_10170089	All Organisms → cellular organisms → Bacteria → Acidobacteria	1382
3300010339|Ga0074046_10662337	All Organisms → cellular organisms → Bacteria → Acidobacteria	615
3300010339|Ga0074046_10714737	Not Available	588
3300010339|Ga0074046_10766527	Not Available	565
3300010371|Ga0134125_11997837	All Organisms → cellular organisms → Bacteria	630
3300010379|Ga0136449_100830924	Not Available	1520
3300010398|Ga0126383_10488785	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1287
3300010400|Ga0134122_10095330	Not Available	2348
3300011120|Ga0150983_14556019	Not Available	653
3300011269|Ga0137392_10223034	Not Available	1547
3300012209|Ga0137379_10939292	Not Available	769
3300012469|Ga0150984_110109560	Not Available	576
3300012929|Ga0137404_11328031	All Organisms → cellular organisms → Bacteria → Acidobacteria	663
3300012931|Ga0153915_10549805	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1324
3300012961|Ga0164302_11786648	Not Available	519
3300012971|Ga0126369_10680790	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1105
3300012986|Ga0164304_10612318	All Organisms → cellular organisms → Bacteria → Acidobacteria	814
3300013296|Ga0157374_12677643	All Organisms → cellular organisms → Bacteria	526
3300014311|Ga0075322_1095801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689
3300015259|Ga0180085_1081264	All Organisms → cellular organisms → Bacteria → Acidobacteria	946
3300015264|Ga0137403_11152124	All Organisms → cellular organisms → Bacteria → Acidobacteria	621
3300017823|Ga0187818_10181077	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	919
3300017930|Ga0187825_10235260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668
3300017934|Ga0187803_10070926	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1371
3300017939|Ga0187775_10076832	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1077
3300017973|Ga0187780_11361823	All Organisms → cellular organisms → Bacteria → Acidobacteria	522
3300017974|Ga0187777_10369096	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	989
3300017975|Ga0187782_10252722	All Organisms → cellular organisms → Bacteria → Acidobacteria	1325
3300018001|Ga0187815_10177438	All Organisms → cellular organisms → Bacteria → Acidobacteria	902
3300018014|Ga0187860_1030368	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	2952
3300018043|Ga0187887_10257300	Not Available	1033
3300018058|Ga0187766_10928586	All Organisms → cellular organisms → Bacteria → Acidobacteria	615
3300018060|Ga0187765_11106271	All Organisms → cellular organisms → Bacteria → Acidobacteria	550
3300018088|Ga0187771_11591431	Not Available	555
3300018090|Ga0187770_10177042	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1635
3300020001|Ga0193731_1065139	All Organisms → cellular organisms → Bacteria → Acidobacteria	955
3300020581|Ga0210399_10684075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844
3300021080|Ga0210382_10445525	Not Available	574
3300021170|Ga0210400_11052990	Not Available	660
3300021388|Ga0213875_10218533	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	898
3300021406|Ga0210386_10390335	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1199
3300021420|Ga0210394_10437652	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1151
3300021432|Ga0210384_10099905	All Organisms → cellular organisms → Bacteria	2603
3300021433|Ga0210391_10845144	All Organisms → cellular organisms → Bacteria → Acidobacteria	715
3300021433|Ga0210391_11249438	All Organisms → cellular organisms → Bacteria → Acidobacteria	574
3300021478|Ga0210402_11978328	All Organisms → cellular organisms → Bacteria → Acidobacteria	509
3300025320|Ga0209171_10554313	All Organisms → cellular organisms → Bacteria → Acidobacteria	561
3300025664|Ga0208849_1159126	Not Available	581
3300027662|Ga0208565_1101998	All Organisms → cellular organisms → Bacteria → Acidobacteria	863
3300027667|Ga0209009_1112004	All Organisms → cellular organisms → Bacteria → Acidobacteria	693
3300027812|Ga0209656_10129075	Not Available	1292
3300027829|Ga0209773_10222456	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	789
3300027862|Ga0209701_10725449	Not Available	509
3300027869|Ga0209579_10505238	Not Available	656
3300027879|Ga0209169_10239998	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	950
3300027894|Ga0209068_10573135	Not Available	655
3300027905|Ga0209415_10989689	Not Available	561
3300028037|Ga0265349_1030640	All Organisms → cellular organisms → Bacteria → Acidobacteria	504
3300031231|Ga0170824_105952097	Not Available	965
3300031231|Ga0170824_111736201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805
3300031234|Ga0302325_11534106	All Organisms → cellular organisms → Bacteria → Acidobacteria	855
3300031244|Ga0302297_1093711	Not Available	551
3300031708|Ga0310686_104709760	All Organisms → cellular organisms → Bacteria → Acidobacteria	527
3300031715|Ga0307476_10063062	All Organisms → cellular organisms → Bacteria	2552
3300031715|Ga0307476_10288309	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1203
3300031788|Ga0302319_10527843	Not Available	1257
3300031879|Ga0306919_10286129	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1248
3300031946|Ga0310910_10658754	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	829
3300031954|Ga0306926_10336698	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1867
3300032059|Ga0318533_10970469	Not Available	623
3300032180|Ga0307471_100088053	All Organisms → cellular organisms → Bacteria	2763
3300032205|Ga0307472_100321633	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1255
3300032770|Ga0335085_10118181	All Organisms → cellular organisms → Bacteria	3390
3300032805|Ga0335078_12517916	Not Available	530
3300032892|Ga0335081_10436564	Not Available	1670
3300032893|Ga0335069_10097648	All Organisms → cellular organisms → Bacteria	3717
3300032896|Ga0335075_11486097	Not Available	565
3300032955|Ga0335076_11346009	Not Available	599
3300033004|Ga0335084_11517057	Not Available	662
3300033158|Ga0335077_12232014	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	502

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.06%
Host-Associated	Host-Associated	8.94%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.42%
Aquatic	Environmental → Aquatic	14.63%
Plants	Host-Associated → Plants	8.13%
Human	Host-Associated → Human	0.81%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.98%
Freshwater	Environmental → Aquatic → Freshwater	10.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.88%
Sediment	Environmental → Aquatic → Sediment	3.25%
Peat	Environmental → Terrestrial → Peat	2.44%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.44%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.81%
Digestive System	Host-Associated → Human → Digestive System	0.81%
Roots	Host-Associated → Plants → Roots	0.81%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.53%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	20.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.76%
Loam	Environmental → Terrestrial → Soil → Loam	8.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.25%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.44%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.44%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.63%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.81%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.81%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.81%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.20%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	19.51%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.63%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.06%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.06%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.25%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.25%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.44%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.63%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.81%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.81%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.81%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.81%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.81%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.13%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.50%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.69%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.88%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.06%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.06%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.25%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.25%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.25%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	3.25%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.44%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.44%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.63%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.63%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.63%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.81%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.81%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.81%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.81%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.81%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.81%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.81%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.81%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.81%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.81%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.81%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.81%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated
3300005897	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_103	Environmental
3300005903	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_303	Environmental
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental
3300010379	Sb_50d combined assembly	Environmental
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated
3300014311	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1	Environmental
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental
3300025664	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)	Environmental
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental
3300028037	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE1	Environmental
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental
3300031244	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_2	Environmental
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101784362	3300000567	Peatlands Soil	PLGVALALTVAATIYLGVLPGRVLDYASRGAALLTR*
JGI26339J46600_101313772	3300003218	Bog Forest Soil	RIPMGLGIGLAISLVATIYLGVLPGRVLGYAMESAQDLLK*
Ga0062389_1015236161	3300004092	Bog Forest Soil	PIPLGLGAALAISLATTIYLGVLPGRVLDYAARTASEWAR*
Ga0062386_1016326592	3300004152	Bog Forest Soil	SIPAGLGVALAISLIATIYLGVLPGRVLSYAIESAQDLLK*
Ga0058863_113500392	3300004799	Host-Associated	VMPMPASVGFSLAVSVLATIYLGVLPGRVLEYALQSARDLIR*
Ga0066690_104422981	3300005177	Soil	EPAPLAPIPFGVSAALAISALATIYLGILPGRVLEYASQSAADLLR*
Ga0066388_1006466662	3300005332	Tropical Forest Soil	EPRDEVPVTPMSSGLRVALAISLAATIYLGVLPGRVLEYAHRSVNLLR*
Ga0070659_1013314981	3300005366	Corn Rhizosphere	TPIPAGLGFALTLSLALTIYLGVLPNRVLEYASRSVGLLR*
Ga0070709_106167402	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	PIPMGLGLALALSLAATIYLGVLPNRVLEYASRSVNLLR*
Ga0070711_1018268722	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	EVPVTPIPAGLGLALALSLAVTIYLGVLPNRVLEYAGRSVNLLR*
Ga0070662_1018930751	3300005457	Corn Rhizosphere	AVPPVSFSLGSALAISVVATLYLGILPGRVLDYARSAAEYIR*
Ga0070706_1000441201	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LAPIPFGVSAALAISALATIYLGILPGRVLECASQSAADLLR*
Ga0070741_114755641	3300005529	Surface Soil	REPREDTAVAPVTPGLGLALGLSLAVTIYLGILPGRVLEYAGRSVDLLR*
Ga0070735_104381181	3300005534	Surface Soil	LGLGTALAISLAATIYLGVLPGRVLDYAARTVADWAH*
Ga0070732_109818021	3300005542	Surface Soil	GLGVALAISLIATIYLGVLPGRVLDYASKSAAQLIR*
Ga0066695_103126481	3300005553	Soil	IPLGVSAALTISALATIYLGVLPGRVLEYTSRSAADLLR*
Ga0068856_1005475362	3300005614	Corn Rhizosphere	AGLGVGLAISAIATIYLGVLPGRVLEYALRGAQELIR*
Ga0075281_10477081	3300005897	Rice Paddy Soil	MTAAVGLSLAISAIVTIYLGVLPDRALQYALDGARALVR*
Ga0075281_10905232	3300005897	Rice Paddy Soil	GLAVAISVIATLYLGVLPGRVLDYALQSAKQLIQ*
Ga0075279_100754041	3300005903	Rice Paddy Soil	PVSPVPWSLGTALAVSLLATIYLGVLPGRVLEYATRSAAELMR*
Ga0070766_101441601	3300005921	Soil	GAALTISLAATIYLGVLPGRVIEYASRTATAWSR*
Ga0080027_101375973	3300005993	Prmafrost Soil	REEAPLPRIPAGLGTALAISVAATIYLGVLPGRVLEYASQSVSQLLR*
Ga0070717_100341114	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	PVTPIPVGLGLALGLSLAVTIYLGVLPNRVLEYAGRSVDLLR*
Ga0075028_1002149873	3300006050	Watersheds	LGAALAISAFLTLYLGLLPGRVLEYARSAAELLR*
Ga0075017_1013227151	3300006059	Watersheds	PIPVGLGAALAISLAATIYLGVLPGRVLDYASRSVVELLR*
Ga0070712_1000126891	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GLGVALALSLAATIYLGVLPNRVLEYASRSVNLLR*
Ga0079222_100204255	3300006755	Agricultural Soil	AMPASVGFSVAAAAIATIYLGVLPGRVLDYALQGARALIK*
Ga0079222_118199231	3300006755	Agricultural Soil	LGVALAISLVATIYLGVLPGRVLDYATKSAEQLMR*
Ga0068865_1008549302	3300006881	Miscanthus Rhizosphere	PIPVALGVALAISLIATLYLGLLPGRVLDYASRSVAELTR*
Ga0075424_1002987145	3300006904	Populus Rhizosphere	SAALGTALAISAAATLYLGILPGRVLEYASRSAADLMR*
Ga0099794_107533212	3300007265	Vadose Zone Soil	MREAREPAPLAPIPFGVSAALAISALATIYLGILPGRVLEYASQSAADLLR*
Ga0066709_1031738531	3300009137	Grasslands Soil	KEETLVAPIPPGLGIALALSLAATIYLGVLPGRVLEYAGRSVGELLH*
Ga0066709_1043197511	3300009137	Grasslands Soil	VSAALAISALATIYLGILPGRVLEYASRSAADLLR*
Ga0099792_112038893	3300009143	Vadose Zone Soil	GLAIALALSLAATIYLGVLPGRVLDYAGQSVGLLH*
Ga0111538_119847341	3300009156	Populus Rhizosphere	EVAPISFSLGSAIAISVIATLYLGILPGRVLEFASRSAADLVR*
Ga0116218_14813192	3300009522	Peatlands Soil	LGVALALTVAATIYLGVLPGRVLDYASRGAALLTR*
Ga0126374_106957223	3300009792	Tropical Forest Soil	PVPGMPASLGTAVAISLLATLYLGVLPDRVLEDAIHAAQDLVK*
Ga0116223_102353813	3300009839	Peatlands Soil	VPVSPVPFGLGAALAISLGATIYLGVLPGRILDYAARTAAEWAR*
Ga0116223_104089362	3300009839	Peatlands Soil	VSAPLGVALALTVAATIYLGVLPGRVLDYASRGAALLTR*
Ga0126384_119640261	3300010046	Tropical Forest Soil	SMPASLGVAVAICVIVTIYLGVLPNRVLGDAIRAAQDLVK*
Ga0134111_100373193	3300010329	Grasslands Soil	LRAALTLTVFATIYLGILPGRVLEYASRSATELLRQ*
Ga0074046_101700893	3300010339	Bog Forest Soil	PMGLGIGLAISLVATIYLGVLPGRVLGYAIESAQDLLK*
Ga0074046_106623371	3300010339	Bog Forest Soil	PVPFGLGTALAISLAATIYLGVLPGRVIDYAARTAAEWAR*
Ga0074046_107147371	3300010339	Bog Forest Soil	QVDAPIDPIPAGLGWALAISLVATIYLGVLPGRILDYASRSVAELLR*
Ga0074046_107665272	3300010339	Bog Forest Soil	GVALALTVAATIYLGVLPGRVLDYASRGAALLTR*
Ga0134125_119978372	3300010371	Terrestrial Soil	LGVSLAACLLATIYLGVLPGRVLDYAIESARVLTR*
Ga0136449_1008309241	3300010379	Peatlands Soil	QSVSAPLGVALALTVAATIYLGVLPGRVLDYASRGAALLMR*
Ga0126383_104887851	3300010398	Tropical Forest Soil	LGSAVAISLIATIYLGVLPNRVLENAVRAAQDLVR*
Ga0134122_100953302	3300010400	Terrestrial Soil	EAVPVTPIPAGLGFALTLSLALTIYLGVLPNRVLEYASRSVGLLR*
Ga0150983_145560192	3300011120	Forest Soil	ASLGAALAVSVAATLYLGILPGQVLEYASRSATELLR*
Ga0137392_102230343	3300011269	Vadose Zone Soil	GAAIGISIAATLYLGLLPGRVLEYASRSAAELLH*
Ga0137379_109392921	3300012209	Vadose Zone Soil	EPREEALVSAVPAGLAIALALSLAATIYLGVLPNRVLEYAGQSVGLLH*
Ga0150984_1101095601	3300012469	Avena Fatua Rhizosphere	NIPAGLGIALALSLAATVYLGVLPGRILEYAGRSVDLLH*
Ga0137404_113280311	3300012929	Vadose Zone Soil	PLGVSAALAISALATIYLGILPGRVLEYASQSAADLLR*
Ga0153915_105498051	3300012931	Freshwater Wetlands	DTPMIPMPPALGLSLAASLFATIYLGVLPGRVLDYAIQSARDLVK*
Ga0164302_117866483	3300012961	Soil	SLPVASIPAGLGIALALSLAATVYLGVLPGRILEYAGRSVDLLH*
Ga0126369_106807902	3300012971	Tropical Forest Soil	PMSSGLRVALAISLAATIYLGVLPGRVLEYAHRSVNLLR*
Ga0164304_106123181	3300012986	Soil	EARESVPLDPIPVGVSAALVISTLATIYLGIFPGRVLEYASRSAADLLR*
Ga0157374_126776431	3300013296	Miscanthus Rhizosphere	IPLGLGVGLAISAIATIYLGVLPGRVLEYAIRGAQDLMK*
Ga0075322_10958012	3300014311	Natural And Restored Wetlands	EEIAVAPVPAALGTALAVTLLATIYLGVLPGRVLEYASRSAADLMH*
Ga0180085_10812641	3300015259	Soil	MPAALGVSLAAAALATIYLGVLPGRVLDYALQGARDLMR*
Ga0137403_111521242	3300015264	Vadose Zone Soil	AREPVPLAPIPFGVSAALAISALATIYLGILPGRVLEYASRSAADLLR*
Ga0132258_119351023	3300015371	Arabidopsis Rhizosphere	ALGAALAISVAATLYLGLLPGRVLEFASRSAAELLH*
Ga0187818_101810773	3300017823	Freshwater Sediment	GMPLGIALTLAVAATIYLGVLPGRVLDYASRGAALLVR
Ga0187825_102352602	3300017930	Freshwater Sediment	VVPVMRIPPALATALAISLIATIYLGVLPGRVLEYASKSASALLR
Ga0187803_100709261	3300017934	Freshwater Sediment	VQSVSAPLGVALALTVAATIYLGVLPGRVLDYASRGAALLTR
Ga0187775_100768323	3300017939	Tropical Peatland	PLGVALTFALAATIYLGVLPGRVLDYASRGAALLVR
Ga0187780_113618231	3300017973	Tropical Peatland	SPVPAGLGAALAISLMTTIYLGILPGRVLKYAAQTATAWMR
Ga0187777_103690961	3300017974	Tropical Peatland	TPVASVPLGLGAALITSLALTIYLGVLPGRVLAYASRSAAGLLR
Ga0187782_102527223	3300017975	Tropical Peatland	ASVSVPLGVALTLTVAATIYLGVLPGRVLDYASRGAALLVR
Ga0187815_101774382	3300018001	Freshwater Sediment	RIPLGLGTALAVSLAATIYLGVLPGRVLDYAARTAAEWAR
Ga0187860_10303681	3300018014	Peatland	LGIGLAISLIMTIYLGVLPGRVIEYAIQGAQDLLK
Ga0187887_102573003	3300018043	Peatland	IPAGLGIGLAISLIATIYLGVLPGRVLDYAMQSAQDLMK
Ga0187766_109285862	3300018058	Tropical Peatland	GLGTALAISLVATVYLGVLPGRVLDFAARSVSELAH
Ga0187765_111062711	3300018060	Tropical Peatland	GLGTALAISLATTIYLGVLPGRVLSYAAQTASAWMR
Ga0187771_115914312	3300018088	Tropical Peatland	LGIALTLTVAATIYLGVLPGRVLDYASRGAALLVR
Ga0187770_101770423	3300018090	Tropical Peatland	AHIPAALGIGLAISLIATIYLGVLPGRVLGYAMESAQELLK
Ga0193731_10651391	3300020001	Soil	AREPAPLAPIPFGVSAALAISALATIYLGILPGRVLEYASRSAADLLR
Ga0193730_11445521	3300020002	Soil	PVPAALGIALAVSSIATLYLGLLPGRVLDYASRSVAELTR
Ga0210399_106840753	3300020581	Soil	VAAIPASLGAALAVSLAATLYLGILPGQVLEYASRSATELLR
Ga0210382_104455252	3300021080	Groundwater Sediment	EAAVRPIPATLGIALAVSLIATLYLGLLPGRVLDYASRSVGELTR
Ga0210400_110529903	3300021170	Soil	PAGLGIGLAISLIATIYLGVMPGRVLEHAVQSAQDLIK
Ga0213875_102185332	3300021388	Plant Roots	PSRLGIALGLSLAATIYLGILPGRILEYAARSVALLR
Ga0210386_103903353	3300021406	Soil	LGAALAISLAATIYLGVLPGRLLDYAARTAAEWAR
Ga0210394_104376521	3300021420	Soil	IPLGLGAALAISLAATIYLGVLPGRLLDYAARTAAEWAR
Ga0210384_100999051	3300021432	Soil	EVPLAPIPLGLGTALAISLAATIYLGVLPGRVLDYAARTAAEWAR
Ga0210391_108451442	3300021433	Soil	ALPRIPFALGTALAISVATTIYLGVLPGRVLDYAARTAAEWAR
Ga0210391_112494381	3300021433	Soil	PLGLGAALAISLAATIYLGVLPGRLLDYAARTAAEWAR
Ga0210402_119783282	3300021478	Soil	GLGAALAISLVATIYLGVLPGQVLEYAARTATEWAR
Ga0209171_105543131	3300025320	Iron-Sulfur Acid Spring	ALPRIPFALGTALAISVVATIYLGVLPGRVLDYAARTAAEWAR
Ga0208849_11591261	3300025664	Arctic Peat Soil	TAPLPSIPAGLGAALALSVAATIYLGVLPGRVLEYASQSVAQLLH
Ga0208565_11019982	3300027662	Peatlands Soil	EPKGEISVSPIPAGLGTALAISLVATIYMGVLPGRLLDYAARSVNELLH
Ga0209009_11120042	3300027667	Forest Soil	RESVPLAPIPFGVSVALAISALATIYLGILPGRVLDYASRAAVDLLR
Ga0209656_101290751	3300027812	Bog Forest Soil	IPAGLGIGLAISVIATIYLGVLPGRVLEYAIHGAQDLMK
Ga0209773_102224563	3300027829	Bog Forest Soil	LGFALAFSLAATIYLGVLPGRVLEYASRTATAWAR
Ga0209701_107254493	3300027862	Vadose Zone Soil	ATVSPIPAGLGVALALSLAATIYLGVLPGRVLEYAGRSVGLLR
Ga0209579_105052383	3300027869	Surface Soil	AGVGTALAISLGATIYLGVLPGRVLDYASRSVGELLR
Ga0209169_102399981	3300027879	Soil	ISVPRIPIGLGFALAISLVATIYLGVLPGRVLDYASRTAAAWAR
Ga0209068_105731353	3300027894	Watersheds	PALGAALAISVAATLYLGLLPGRVLEYASRSAAELLH
Ga0209415_109896891	3300027905	Peatlands Soil	PLGVALALTVAATIYLGVLPGRVLDYASRGAALLTR
Ga0265349_10306402	3300028037	Soil	PIPLGLGTALAISLAATIYLGVLPGRLLDYAARTAAAWAH
Ga0170824_1059520971	3300031231	Forest Soil	APLSISLSTALAISVIATIYLGILPGRVLEFAARSATELMR
Ga0170824_1117362011	3300031231	Forest Soil	LGTALAICLATTLYLGLLPGRVLDYASRSVADLVH
Ga0302325_115341062	3300031234	Palsa	GLGSALAICLAATIYLGVLPGRVLEYASRSAAELLH
Ga0302297_10937111	3300031244	Fen	RMPFALGAAVAISAVATIYLGVLPNRVLDGAIHAAQDLIR
Ga0310686_1047097601	3300031708	Soil	GLGAALAISLAATIYLGVLPGRLLDYAARTATEWAR
Ga0307476_100630621	3300031715	Hardwood Forest Soil	REPRGEVPVTPISPSLGTALVLSVLATIYLGVLPSRVLDYAARSVAAWTH
Ga0307476_102883093	3300031715	Hardwood Forest Soil	EDIALPRIPFALGTALAISVVATIYLGVLPGRVLDFVARTAAEWAR
Ga0302319_105278431	3300031788	Bog	GLGIGLTISLIATIYLGVLPGRILYYAMQSAQDLLK
Ga0306919_102861293	3300031879	Soil	PAGLGVAVAISLIATIYLGVLPNRVLDDAVRAAQDLVK
Ga0310910_106587543	3300031946	Soil	MPAGLGVAVAISLIATLYLGVLPNRVLGDAVKAAQDLVK
Ga0306926_103366984	3300031954	Soil	PPMPASLGSAVAISLIATIYLGVLPNRVLDDAIRAAQDLVK
Ga0318533_109704692	3300032059	Soil	TPVAPISVSLGVGIAISLIATIYLGVLPNRVLADAVRAAQDLLK
Ga0307471_1000880531	3300032180	Hardwood Forest Soil	AVSPVSLGLGAALAVSLTITLYLGVLPAQVLKYASQSATSLVR
Ga0307472_1003216331	3300032205	Hardwood Forest Soil	PIPVGLGLALGLSLAVTIYLGVLPNRVLEYAGRSVDLLR
Ga0335085_101181811	3300032770	Soil	VAPVPLGLGTALVVSLAATIYLGVLPGRVLEYASRSAAQLLR
Ga0335078_125179161	3300032805	Soil	DVPVAPIPLGLGTALAISLIATIYLGVLPGRVLDYAGQSVSQLMH
Ga0335081_104365642	3300032892	Soil	ASLPPVPAAMGVALAVSVVATLYLGILPGRVLDYASRSAADLMK
Ga0335069_100976486	3300032893	Soil	PVGLGTALAISVLATLYLGILPGRVLQYAARSAAQLMQ
Ga0335075_114860971	3300032896	Soil	PAGLGIGLAISLIATIYLGVLPGRVLEYAIQSAQDLMK
Ga0335076_113460091	3300032955	Soil	TLGVGLAISLAATIYLGVLPGRVLDYAVQSAQDLMK
Ga0335084_115170571	3300033004	Soil	LGVSLAVSALATIYLGVLPGRVLEYALQGARDLMK
Ga0335077_122320141	3300033158	Soil	RIPAGLGAAMAISLIATIYLGVLPNRVLDNAVRAAQDLLR