Metagenome / Metatranscriptome Family F070414

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070414
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	113 residues
Representative Sequence	MKGILFTVLLTALVFFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK
Number of Associated Samples	112
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	60.16 %
% of genes near scaffold ends (potentially truncated)	47.15 %
% of genes from short scaffolds (< 2000 bps)	84.55 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.675 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (13.008 % of family members)
Environment Ontology (ENVO)	Unclassified (39.837 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (78.862 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 83.48% β-sheet: 0.00% Coil/Unstructured: 16.52%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF09084	NMT1	16.26
PF00672	HAMP	7.32
PF14485	DUF4431	4.07
PF00497	SBP_bac_3	3.25
PF13531	SBP_bac_11	1.63
PF13714	PEP_mutase	1.63
PF13343	SBP_bac_6	0.81
PF01613	Flavin_Reduct	0.81
PF17203	sCache_3_2	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	16.26
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	16.26
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.67 %
Unclassified	root	N/A	20.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.67 %
Unclassified	root	N/A	20.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.67 %
Unclassified	root	N/A	20.33 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	55.28 %
Unclassified	root	N/A	20.33 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.88 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	55.28 %
Unclassified	root	N/A	20.33 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	4.88 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	55.28 %
Unclassified	root	N/A	20.33 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	52.85 %
Unclassified	root	N/A	20.33 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.81 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	52.85 %
Unclassified	root	N/A	20.33 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004114\|Ga0062593_100610282	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300004463\|Ga0063356_103915213	Not Available	641	Open in IMG/M
3300004803\|Ga0058862_12670043	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	659	Open in IMG/M
3300005276\|Ga0065717_1001097	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	613	Open in IMG/M
3300005277\|Ga0065716_1013269	Not Available	593	Open in IMG/M
3300005288\|Ga0065714_10099087	All Organisms → cellular organisms → Bacteria	1694	Open in IMG/M
3300005289\|Ga0065704_10161533	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1351	Open in IMG/M
3300005290\|Ga0065712_10017438	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1993	Open in IMG/M
3300005294\|Ga0065705_10219240	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300005294\|Ga0065705_10290588	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300005294\|Ga0065705_10702428	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300005295\|Ga0065707_11025924	Not Available	533	Open in IMG/M
3300005327\|Ga0070658_10731020	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	860	Open in IMG/M
3300005328\|Ga0070676_10193730	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300005330\|Ga0070690_100478089	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	928	Open in IMG/M
3300005334\|Ga0068869_100098414	All Organisms → cellular organisms → Bacteria	2210	Open in IMG/M
3300005339\|Ga0070660_101482070	Not Available	577	Open in IMG/M
3300005343\|Ga0070687_100360271	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	941	Open in IMG/M
3300005344\|Ga0070661_100178785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1613	Open in IMG/M
3300005345\|Ga0070692_10282897	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1006	Open in IMG/M
3300005354\|Ga0070675_101932736	Not Available	544	Open in IMG/M
3300005355\|Ga0070671_100362266	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1238	Open in IMG/M
3300005356\|Ga0070674_100293980	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300005364\|Ga0070673_100942938	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	802	Open in IMG/M
3300005365\|Ga0070688_100324981	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1119	Open in IMG/M
3300005366\|Ga0070659_101373512	Not Available	627	Open in IMG/M
3300005438\|Ga0070701_11145692	Not Available	549	Open in IMG/M
3300005444\|Ga0070694_100194892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1507	Open in IMG/M
3300005457\|Ga0070662_100040635	All Organisms → cellular organisms → Bacteria	3313	Open in IMG/M
3300005535\|Ga0070684_100953267	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300005539\|Ga0068853_100167097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1989	Open in IMG/M
3300005544\|Ga0070686_100110266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1873	Open in IMG/M
3300005546\|Ga0070696_101908414	Not Available	515	Open in IMG/M
3300005563\|Ga0068855_100629408	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1154	Open in IMG/M
3300005564\|Ga0070664_100114975	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2351	Open in IMG/M
3300005577\|Ga0068857_100101127	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2587	Open in IMG/M
3300005614\|Ga0068856_102160513	Not Available	566	Open in IMG/M
3300005615\|Ga0070702_100137093	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1554	Open in IMG/M
3300005618\|Ga0068864_101662153	Not Available	643	Open in IMG/M
3300005718\|Ga0068866_10159167	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300005719\|Ga0068861_100656399	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300005764\|Ga0066903_102317976	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300005843\|Ga0068860_100295539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1586	Open in IMG/M
3300006175\|Ga0070712_100052336	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2847	Open in IMG/M
3300006196\|Ga0075422_10466963	Not Available	568	Open in IMG/M
3300006755\|Ga0079222_10047569	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1969	Open in IMG/M
3300006806\|Ga0079220_11199024	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	626	Open in IMG/M
3300006844\|Ga0075428_101167611	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	812	Open in IMG/M
3300006852\|Ga0075433_10085715	All Organisms → cellular organisms → Bacteria	2781	Open in IMG/M
3300006852\|Ga0075433_11190248	Not Available	662	Open in IMG/M
3300006854\|Ga0075425_100169225	All Organisms → cellular organisms → Bacteria	2508	Open in IMG/M
3300006871\|Ga0075434_101527915	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	677	Open in IMG/M
3300006903\|Ga0075426_11150054	Not Available	588	Open in IMG/M
3300006904\|Ga0075424_100060981	All Organisms → cellular organisms → Bacteria	3944	Open in IMG/M
3300006904\|Ga0075424_100364305	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1540	Open in IMG/M
3300006914\|Ga0075436_101295512	Not Available	551	Open in IMG/M
3300006954\|Ga0079219_10006608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3607	Open in IMG/M
3300009092\|Ga0105250_10416548	Not Available	598	Open in IMG/M
3300009094\|Ga0111539_10508091	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1404	Open in IMG/M
3300009147\|Ga0114129_10870769	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1144	Open in IMG/M
3300009156\|Ga0111538_10091597	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3865	Open in IMG/M
3300009156\|Ga0111538_10673095	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1311	Open in IMG/M
3300009162\|Ga0075423_11366553	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300009176\|Ga0105242_10208380	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1740	Open in IMG/M
3300009177\|Ga0105248_11445249	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	778	Open in IMG/M
3300009545\|Ga0105237_10201950	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1988	Open in IMG/M
3300009545\|Ga0105237_12139002	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	569	Open in IMG/M
3300010048\|Ga0126373_12454878	Not Available	581	Open in IMG/M
3300010371\|Ga0134125_10143189	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2662	Open in IMG/M
3300010371\|Ga0134125_11363589	Not Available	773	Open in IMG/M
3300010376\|Ga0126381_100851625	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1311	Open in IMG/M
3300010397\|Ga0134124_10584369	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300010399\|Ga0134127_10811385	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	985	Open in IMG/M
3300010401\|Ga0134121_12581422	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	551	Open in IMG/M
3300012498\|Ga0157345_1027426	Not Available	619	Open in IMG/M
3300012506\|Ga0157324_1046523	Not Available	550	Open in IMG/M
3300012517\|Ga0157354_1091048	Not Available	510	Open in IMG/M
3300012519\|Ga0157352_1042736	Not Available	647	Open in IMG/M
3300012897\|Ga0157285_10090680	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300012951\|Ga0164300_10520900	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	684	Open in IMG/M
3300012988\|Ga0164306_10271048	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300013096\|Ga0157307_1029458	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300013105\|Ga0157369_11112528	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	807	Open in IMG/M
3300013296\|Ga0157374_11257462	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	762	Open in IMG/M
3300013297\|Ga0157378_10166407	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2065	Open in IMG/M
3300013306\|Ga0163162_10124562	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2683	Open in IMG/M
3300013307\|Ga0157372_10429447	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1540	Open in IMG/M
3300014497\|Ga0182008_10436564	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	709	Open in IMG/M
3300015371\|Ga0132258_11955567	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1476	Open in IMG/M
3300015374\|Ga0132255_101470899	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1030	Open in IMG/M
3300015374\|Ga0132255_101740233	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	946	Open in IMG/M
3300015374\|Ga0132255_105810689	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	522	Open in IMG/M
3300016270\|Ga0182036_10520296	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	945	Open in IMG/M
3300019361\|Ga0173482_10132063	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	950	Open in IMG/M
3300019362\|Ga0173479_10038540	All Organisms → cellular organisms → Bacteria	1499	Open in IMG/M
3300025315\|Ga0207697_10043227	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1852	Open in IMG/M
3300025907\|Ga0207645_10057022	All Organisms → cellular organisms → Bacteria	2494	Open in IMG/M
3300025909\|Ga0207705_10206072	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1491	Open in IMG/M
3300025912\|Ga0207707_10141244	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2105	Open in IMG/M
3300025912\|Ga0207707_11608289	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	511	Open in IMG/M
3300025914\|Ga0207671_10696796	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	808	Open in IMG/M
3300025917\|Ga0207660_10267616	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1353	Open in IMG/M
3300025918\|Ga0207662_10138341	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1541	Open in IMG/M
3300025930\|Ga0207701_10032022	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4954	Open in IMG/M
3300025931\|Ga0207644_11230052	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	629	Open in IMG/M
3300025932\|Ga0207690_10143355	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1763	Open in IMG/M
3300025933\|Ga0207706_10062713	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3273	Open in IMG/M
3300025933\|Ga0207706_10389933	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1208	Open in IMG/M
3300025934\|Ga0207686_10620718	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300025935\|Ga0207709_10209788	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1397	Open in IMG/M
3300025941\|Ga0207711_10768984	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	897	Open in IMG/M
3300025949\|Ga0207667_10379030	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1441	Open in IMG/M
3300026041\|Ga0207639_10203042	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1701	Open in IMG/M
3300026078\|Ga0207702_12021532	Not Available	567	Open in IMG/M
3300026095\|Ga0207676_12246169	Not Available	543	Open in IMG/M
3300027765\|Ga0209073_10018112	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2036	Open in IMG/M
3300027775\|Ga0209177_10103463	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	907	Open in IMG/M
3300027787\|Ga0209074_10020975	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1764	Open in IMG/M
3300027909\|Ga0209382_10925062	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	916	Open in IMG/M
3300031538\|Ga0310888_11047811	Not Available	514	Open in IMG/M
3300032122\|Ga0310895_10366398	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	698	Open in IMG/M
3300032421\|Ga0310812_10261746	Not Available	763	Open in IMG/M
3300033412\|Ga0310810_10094912	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3564	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	60.98%
Environmental	Environmental	39.02%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	60.16%
Terrestrial	Environmental → Terrestrial	39.02%
Human	Host-Associated → Human	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	39.02%
Rhizosphere	Host-Associated → Plants → Rhizosphere	38.21%
Rhizoplane	Host-Associated → Plants → Rhizoplane	21.95%
Digestive System	Host-Associated → Human → Digestive System	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	26.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	24.39%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.82%
Loam	Environmental → Terrestrial → Soil → Loam	13.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.32%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	24.39%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.32%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.69%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.81%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.81%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	13.01%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	8.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.06%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.06%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	3.25%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.25%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.25%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.25%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.44%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.63%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.81%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005276	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5	Host-Associated	Open in IMG/M
3300005277	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012498	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410	Host-Associated	Open in IMG/M
3300012506	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.old.040610	Host-Associated	Open in IMG/M
3300012517	Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610	Environmental	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062593_1006102822	3300004114	Soil	MKGMLSTILLTGVLFVSILESLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0063356_1039152131	3300004463	Arabidopsis Thaliana Rhizosphere	MQGTLSTILLTALILFASLEPIGMAQSTKQEATKDNQEQKKSSSGFEDDQNTVCLSATRQAKMIASIVDSYSRRLAACAVSNPTFRDDCSTDFARLTRGYNQYQLAVSSVRNYCK*
Ga0058862_126700431	3300004803	Host-Associated	MKGILFTVLLTTLVFFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLGACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0065717_10010971	3300005276	Arabidopsis Rhizosphere	MKGMLSTILVTGFVFFSILESLGXAQSTKQEVTXDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYC
Ga0065716_10132691	3300005277	Arabidopsis Rhizosphere	QNWQTRVVSISALGAEEYEMKGMLATILVTGFVFFSILESLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0065714_100990871	3300005288	Miscanthus Rhizosphere	ILESLGMAQSTKQEATKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0065704_101615333	3300005289	Switchgrass Rhizosphere	MKGMLSTILVTGFVFFSILESLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0065712_100174382	3300005290	Miscanthus Rhizosphere	MKGILFTVLLTALVFFAALDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLGACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0065705_102192402	3300005294	Switchgrass Rhizosphere	MKGMLSTILVTGFVFFSILESLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACAVSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0065705_102905882	3300005294	Switchgrass Rhizosphere	MKGILFTVLLTALVFFAALDSIGMAQSTKQEATKDNQEEKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0065705_107024281	3300005294	Switchgrass Rhizosphere	EMLSTILLTGFLVFSLLEPLSMAQSTKQEVTKDNQEQKKSSSGFEDDQSAVCLSATRQAKMIASIVDSYSRRLAACAVSNPTFRDDCSTDFGRLARGYNQYQLAVSSVRNYCK*
Ga0065707_110259241	3300005295	Switchgrass Rhizosphere	GFLVFSLLEPLSMAQSTKQEVTKDNQEQKKSSSGFEDDQSAVCLSATRQAKMIASIVDSYSRRLAACAVSNPTFRDDCSTDFGRLARGYNQYQLAVSSVRNYCK*
Ga0070658_107310201	3300005327	Corn Rhizosphere	MKRILFTVLLTALVFFAALDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0070676_101937302	3300005328	Miscanthus Rhizosphere	MKGILFTVLLAALVFFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLGACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0070690_1004780891	3300005330	Switchgrass Rhizosphere	MKGMLSTILLTGLVFFSILGSLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0068869_1000984144	3300005334	Miscanthus Rhizosphere	MKGILFTVLLTTLVFFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0070660_1014820701	3300005339	Corn Rhizosphere	EEYEMKGMLSTILVTGFVFFSILESLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0070687_1003602712	3300005343	Switchgrass Rhizosphere	MKGILFTVLLTALVFFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAV
Ga0070661_1001787852	3300005344	Corn Rhizosphere	MKEILFTVLLTALVFFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0070692_102828971	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MKGILFTVLLTALVFFAALDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0070675_1019327361	3300005354	Miscanthus Rhizosphere	QTRAVSVYALGAEEYEMKGMLSTILVTGFVFFSILESLGMAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0070671_1003622661	3300005355	Switchgrass Rhizosphere	MLLGVEEYEMKGMLSTILVTGFVFFSILESLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0070674_1002939803	3300005356	Miscanthus Rhizosphere	FTVLLTALVFFAALDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0070673_1009429382	3300005364	Switchgrass Rhizosphere	MKGMLSTILLTGLVFFSILGSLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNY
Ga0070688_1003249812	3300005365	Switchgrass Rhizosphere	MKRILFTVLLTALVFFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0070659_1013735121	3300005366	Corn Rhizosphere	TLVFFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLGACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0070701_111456921	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	LLTGVLFVSILESLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0070694_1001948922	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MKGILFTVLLAALVFFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0070662_1000406351	3300005457	Corn Rhizosphere	MKGMLSTILVTGFVFFSILESLGMAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0070684_1009532672	3300005535	Corn Rhizosphere	LESLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRIAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0068853_1001670972	3300005539	Corn Rhizosphere	MKEILFTVLLTALVFFAALDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLGACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0070686_1001102662	3300005544	Switchgrass Rhizosphere	MKRILFTVLLTALVFFAALDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLGACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0070696_1019084141	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	LDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0068855_1006294082	3300005563	Corn Rhizosphere	MKGILFTVLLAAWVFFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0070664_1001149753	3300005564	Corn Rhizosphere	VASVYALGAEEYEMKGMLSTILVTGFVFFSILESLGTAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0068857_1001011271	3300005577	Corn Rhizosphere	LDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLGACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0068856_1021605131	3300005614	Corn Rhizosphere	ALGAEEYEMKGMLSTILVTGFVFFSILESLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACAVSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0070702_1001370932	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MKGMLSTILLTGFLFVSILESLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSSICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0068864_1016621531	3300005618	Switchgrass Rhizosphere	LVFFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLGACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0068866_101591673	3300005718	Miscanthus Rhizosphere	IGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0068861_1006563991	3300005719	Switchgrass Rhizosphere	GMAQSTKQEATKDNQEEKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0066903_1023179762	3300005764	Tropical Forest Soil	MKRILFTVLLTALVFLAAREPIGIAQSTKQEATKDNQEQKKSSFGFEDDTSAICLSATRQAKMIASIIDTYSRRLASCALSNPSFRDDCSADFTRLARGYNEYQVAVSSVRNYCK*
Ga0068860_1002955391	3300005843	Switchgrass Rhizosphere	MKGILFTVLLTTLVFFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLGACALSNPSFRDDCSADFGRLAR
Ga0070712_1000523363	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MLSTILLTGLVFFSILGSLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0075422_104669631	3300006196	Populus Rhizosphere	MKQIFSTVLLAALVFFIPLEPTGMAQSTKQENTKDNQEQKKSSYGFEDDQSAICLSATRQAKMIASIVDTYSRRLAACAVSNPSFRDDCSADFTRLARGYNEYQVAVSSVRNYCK*
Ga0079222_100475692	3300006755	Agricultural Soil	VASIYAIYALGAEEYEMKGMLSTILLTGFVFFSSLESLGIAQSTKQEVTKDSQEQKRSSSGFEDDESAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0079220_111990241	3300006806	Agricultural Soil	VASIYALGAEEYEMKGMLATILLTGLVFCSILESLGIAQSTKQEVTKDSQEQKRSSSGFEDDESAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAV
Ga0075428_1011676111	3300006844	Populus Rhizosphere	MKGILSTVLLTALVVFTALAPLGMAQSTKQEATKDNQEQKRSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0075433_100857152	3300006852	Populus Rhizosphere	MSMLQSPRRIMKQIFSTVLLAALVFFIPLEPTGMAQSTKQENTKDNQEQKKSSYGFEDDQSAICLSATRQAKMIASIVDTYSRRLAACAVSNPSFRDDCSADFTRLARGYNEYQVAVSSVRNYCK*
Ga0075433_111902482	3300006852	Populus Rhizosphere	ARAHVDASIVEEYKMKGILFTVLLTALVLFETLEPIAMAQSTKQEGTKDNQEQKKSSFGFEDDQSAVCLSATRQAKMIASIVDTYSRRLAACALSNPSFRDDCSADFTRLARGYNEYQVAVSSVRNYCK*
Ga0075425_1001692253	3300006854	Populus Rhizosphere	MKGILFTVLLTALVLFETLEPIAMAQSTKQEGTKDNQEQKKSSFGFEDDQSAVCLSATRQAKMIASIVDTYSRRLAACALSNPSFRDDCSADFTRLARGYNEYQVAVSSVRNYCK*
Ga0075434_1015279151	3300006871	Populus Rhizosphere	ILFTVLLTALVLFETLEPIAMAQSTKQEGTKDNQEQKKSSFGFEDDQSAVCLSATRQAKMIASIVDTYSRRLAACALSNPSFRDDCSADFTRLARGYNEYQVAVSSVRNYCK*
Ga0075426_111500541	3300006903	Populus Rhizosphere	FSAEEYKMKGILFTVLLAALVFFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLGACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0075424_1000609811	3300006904	Populus Rhizosphere	MKGILFTVLLAALVFFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLGACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNY
Ga0075424_1003643051	3300006904	Populus Rhizosphere	GMAQSTKQENTKDNQEQKKSSYGFEDDQSAICLSATRQAKMIASIVDTYSRRLAACAVSNPSFRDDCSADFTRLARGYNEYQVAVSSVRNYCK*
Ga0075436_1012955121	3300006914	Populus Rhizosphere	TVLLTALVFFAALDSIGMAQSTKQEATKDNQEQKKSSYGFEDDQSAICLSATRQAKMIASIVDTYSRRLAACAVSNPSFRDDCSADFTRLARGYNEYQVAVSSVRNYCK*
Ga0079219_100066086	3300006954	Agricultural Soil	MKGMLSTILLTGFVFFSSLESLGIAQSTKQEVTKDSQEQKRSSSGFEDDESAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0105250_104165481	3300009092	Switchgrass Rhizosphere	LVFFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0111539_105080912	3300009094	Populus Rhizosphere	MKGILFTVLLTALVFFAALDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLA
Ga0114129_108707691	3300009147	Populus Rhizosphere	MKEILSTVLLTALVVFTAVAPLGMAQSTKQEATKDNQEQKRSSFGFEDDQSAICMSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0111538_100915972	3300009156	Populus Rhizosphere	MKQIFSTVLLAALVFFTPLEPTGMAQSTKQENTKDNQEQKKSSYGFEDDQSAICLSATRQAKMIASIVDTYSRRLAACAVSNPSFRDDCSADFTRLARGYNEYQVAVSSVRNYCK*
Ga0111538_106730953	3300009156	Populus Rhizosphere	MKGILFTVLLTALVLFETLEPIAMAQSTKQEGTKDNQEQKKSSFGFEDDQSAVCLSATRQAKMIASIVDTYSRRLAACALSNPSFRDDCSADFTRLA
Ga0075423_113665532	3300009162	Populus Rhizosphere	LVLFETLEPIAMAQSTKQEGTKDNQEQKKSSFGFEDDQSAVCLSATRQAKMIASIVDTYSRRLAACALSNPSFRDDCSADFTRLARGYNEYQVAVSSVRNYCK*
Ga0105242_102083801	3300009176	Miscanthus Rhizosphere	MKEILFTVLLTALVLFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0105248_114452492	3300009177	Switchgrass Rhizosphere	MKRILFTVLLTALVFFAALDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAV
Ga0105237_102019501	3300009545	Corn Rhizosphere	ARRYLRFSAEEYKMKGILFTVLLTALVFFAALDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0105237_121390021	3300009545	Corn Rhizosphere	MLLGVEEYEMKGMLSTILVTGFVFFSILESLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARG
Ga0126373_124548781	3300010048	Tropical Forest Soil	STKQEGTKDNQEQKKPSFGFQEDDQNEACLSATRQAKQLASLVDSYSRRLAVCATSNPNFRDDCFVDFGRLARSYNQYQVAISSVRNYCK*
Ga0134125_101431893	3300010371	Terrestrial Soil	TVLLAAWVFFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0134125_113635892	3300010371	Terrestrial Soil	MKGTLSTILLTGLVFFSILGSLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0126381_1008516251	3300010376	Tropical Forest Soil	LILLIFMTFAHLERKLAFAQSTKQEGTKDNQEQKKPSFGFQEDDQNEACLSATRQAKQLASLVDSYSRRLAVCATSNPNFRDDCFVDFGRLARSYNQYQVAISSVRNYCK*
Ga0134124_105843691	3300010397	Terrestrial Soil	GVEEYEMKGMLSTMLVTGFVFFSILESLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0134127_108113852	3300010399	Terrestrial Soil	MKGILFTVLLTALVFFAALDSIGMAQSTKQEATKDNQEEKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLGACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0134121_125814221	3300010401	Terrestrial Soil	MKGILFTVLLTALVFFAALDSIGMAQSTKQEATKDNQEEKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARG
Ga0157345_10274261	3300012498	Arabidopsis Rhizosphere	ILESLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0157324_10465231	3300012506	Arabidopsis Rhizosphere	MKGTLSTILVTGLVFFSILGSLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0157354_10910481	3300012517	Unplanted Soil	MKGMLATILLTGLVFCSILESLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0157352_10427361	3300012519	Unplanted Soil	VVSIYALGAEEYEMKGMLATILVTGFVFFSILESLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0157285_100906801	3300012897	Soil	ALVFFATLDSIGMAQSTKQEATKDNQEEKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0164300_105209001	3300012951	Soil	MAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0164306_102710481	3300012988	Soil	PQENQCRQRSLHRDCQTRAVSVYALGVEEYEMKGMLSTILVTGFVFFSILESLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0157307_10294582	3300013096	Soil	VFFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0157369_111125281	3300013105	Corn Rhizosphere	MKGILFTVLLTTLVFFATLDSIGMAQSTKQEATKDNQEEKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0157374_112574622	3300013296	Miscanthus Rhizosphere	MKGMLSTILVTGFVFFSILESLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQV
Ga0157378_101664072	3300013297	Miscanthus Rhizosphere	MKGILFTVLLAALVFFATLDSIGMAQSTKQEATKDNQEEKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0163162_101245623	3300013306	Switchgrass Rhizosphere	MKRILFTVLLTALVFFAALDSIGMAQSTKQEATKDNQEEKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLGACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0157372_104294473	3300013307	Corn Rhizosphere	LTALVFFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0182008_104365641	3300014497	Rhizosphere	MKGILSTVLLTALAVFTALAPLGMAQSTKQEATKDNQEQKRSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0132258_119555673	3300015371	Arabidopsis Rhizosphere	MKGMLSTILLTGFVFFSSLDSLGIAQSTKQEVTKDSQEQKRSSSGFEDDESAVCLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNY
Ga0132255_1014708992	3300015374	Arabidopsis Rhizosphere	MKGMLATILVTGFVFFSILESLGIAQSTKQEITKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0132255_1017402331	3300015374	Arabidopsis Rhizosphere	NPCRETKARFTTQLQTRVASIYALGAEEYEMKGMLSTILLTGFVFFSSLDSLGIAQSTKQEVTKDSQEQKRSSSGFEDDESAVCLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK*
Ga0132255_1058106892	3300015374	Arabidopsis Rhizosphere	MKGMLSTILVTGFVFFSILESLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFG
Ga0182036_105202962	3300016270	Soil	LILLIFMIFGHIERELAFAQSTKQEGTKDNQEQKKPSFGFQEDDQNEMCLSATRQAKQLASLVDSYSRRLAVCATSNPNFRDDCFVDFGRLARSYNQYQVAISSVRNYCK
Ga0173482_101320632	3300019361	Soil	MKEILFTVLLTALVFFAALDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRL
Ga0173479_100385402	3300019362	Soil	MKGILFTVLLAALVFFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK
Ga0207697_100432272	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MKGMLSTILVTGFVFFSILESLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK
Ga0207645_100570223	3300025907	Miscanthus Rhizosphere	MKGILFTVLLTALVFFAALDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLGACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK
Ga0207705_102060721	3300025909	Corn Rhizosphere	MKGILFTVLLTTLVFFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLGACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK
Ga0207707_101412442	3300025912	Corn Rhizosphere	MKGILFTVLLAALVFFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLGACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK
Ga0207707_116082891	3300025912	Corn Rhizosphere	MKGMLSTILVTGFVFFSILESLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQ
Ga0207671_106967961	3300025914	Corn Rhizosphere	MKGILFTVLLTALVFFAALDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGR
Ga0207660_102676161	3300025917	Corn Rhizosphere	MKGILFTVLLTALVFFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK
Ga0207662_101383412	3300025918	Switchgrass Rhizosphere	MKGILFTVLLTTLVFFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK
Ga0207701_100320226	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MKRILFTVLLTALVFFAALDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK
Ga0207644_112300522	3300025931	Switchgrass Rhizosphere	MKEILFTVLLTALVFFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK
Ga0207690_101433553	3300025932	Corn Rhizosphere	IGMVQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLGACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK
Ga0207706_100627134	3300025933	Corn Rhizosphere	MKGILFTVLLTALVFFAALDSIGMAQSTKQEATKDNQEEKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK
Ga0207706_103899331	3300025933	Corn Rhizosphere	MKGMLSTILVTGFVFFSILESLGMAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK
Ga0207686_106207182	3300025934	Miscanthus Rhizosphere	MKGILFTVLLTALVLFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK
Ga0207709_102097882	3300025935	Miscanthus Rhizosphere	VFFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK
Ga0207711_107689841	3300025941	Switchgrass Rhizosphere	MKGILFTVLLTTLVFFATLDSIGMAQSTKQEATKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK
Ga0207667_103790302	3300025949	Corn Rhizosphere	MKGILFTVLLTALVFFAALDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK
Ga0207639_102030423	3300026041	Corn Rhizosphere	MKEILFTVLLTALVFFATLDSIGMAQSTKQEATKDNQEEKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLGACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK
Ga0207702_120215321	3300026078	Corn Rhizosphere	DCQTRAVSVYALGVEEYEMKGMLSTILVTGFVFFSILESLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACAVSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK
Ga0207676_122461691	3300026095	Switchgrass Rhizosphere	TTLVFFATLDSIGMAQSTKQEATKDNQEQKKSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLGACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK
Ga0209073_100181124	3300027765	Agricultural Soil	VASIYALGAEEYEMKGMLATILLTGLVFCSILESLGIAQSTKQEVTKDSQEQKRSSSGFEDDESAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK
Ga0209177_101034632	3300027775	Agricultural Soil	MKGMLATILLTGFVFFSSLESLGIAQSTKQEVTKDSQEQKRSSSGFEDDESAICLSATRQAKMIAAIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK
Ga0209074_100209754	3300027787	Agricultural Soil	VASIYAIYALGAEEYEMKGMLSTILLTGFVFFSSLESLGIAQSTKQEVTKDSQEQKRSSSGFEDDESAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK
Ga0209382_109250621	3300027909	Populus Rhizosphere	MKEILSTVLLTALVVFTAVAPLGMAQSTKQEATKDNQEQKRSSFGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQV
Ga0310888_110478111	3300031538	Soil	AVSVYALGVEEYEMKGMLSTILVTGFVFFSILESLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK
Ga0310895_103663982	3300032122	Soil	MKGMLSTILLTGVLFVSILESLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK
Ga0310812_102617462	3300032421	Soil	KLDLQRNWQTRVASVYALGAEEYEMKGMLSTILVTGFVFFSILESLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACALSNPSFRDDCSADFSRLARGYNEYQVAVSSVRNYCK
Ga0310810_100949123	3300033412	Soil	VASVYALGAEEYEMKGMLSTILVTGFVFFSILESLGIAQSTKQEVTKDNQEQKRSSSGFEDDQSAICLSATRQAKMIASIVDSYSRRLAACAVSNPSFRDDCSADFGRLARGYNEYQVAVSSVRNYCK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070414

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences