Metagenome / Metatranscriptome Family F070412

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070412
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	76 residues
Representative Sequence	MKHAAIALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETSKKTGATNPDTPDPTKNTPGAETKN
Number of Associated Samples	98
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	72.95 %
% of genes near scaffold ends (potentially truncated)	41.46 %
% of genes from short scaffolds (< 2000 bps)	91.87 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.350 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.008 % of family members)
Environment Ontology (ENVO)	Unclassified (43.902 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (62.602 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 14.29% β-sheet: 0.00% Coil/Unstructured: 85.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF04226	Transgly_assoc	12.20
PF10503	Esterase_PHB	3.25
PF00535	Glycos_transf_2	0.81
PF00188	CAP	0.81
PF00239	Resolvase	0.81
PF07568	HisKA_2	0.81
PF07508	Recombinase	0.81
PF13442	Cytochrome_CBB3	0.81
PF02464	CinA	0.81
PF02735	Ku	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	12.20
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.63
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.81
COG1546	Nicotinamide mononucleotide (NMN) deamidase PncC	Coenzyme transport and metabolism [H]	0.81
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	0.81
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.81
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.35 %
All Organisms	root	All Organisms	40.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.35 %
cellular organisms	root	All Organisms → cellular organisms	39.84 %
Viruses	superkingdom	All Organisms → Viruses	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.35 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.84 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.39 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.25 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.35 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.14 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.44 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.35 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.38 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.44 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.35 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	3.25 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.44 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.63 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.35 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3.25 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.44 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1.63 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.35 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3.25 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.44 %
Rhodococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus	1.63 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.35 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3.25 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.44 %
Rhodococcus ruber	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus ruber	1.63 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16685674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4800	Open in IMG/M
2228664021\|ICCgaii200_c0793583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	927	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0347936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0707023	All Organisms → cellular organisms → Bacteria → Proteobacteria	1710	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100649538	All Organisms → cellular organisms → Bacteria → Proteobacteria	1171	Open in IMG/M
3300000789\|JGI1027J11758_12944530	All Organisms → cellular organisms → Bacteria → Proteobacteria	693	Open in IMG/M
3300000789\|JGI1027J11758_13059692	Not Available	563	Open in IMG/M
3300000789\|JGI1027J11758_13076659	Not Available	545	Open in IMG/M
3300000890\|JGI11643J12802_10171593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1978	Open in IMG/M
3300000891\|JGI10214J12806_11379013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1037	Open in IMG/M
3300000956\|JGI10216J12902_105988512	All Organisms → cellular organisms → Bacteria	1494	Open in IMG/M
3300001989\|JGI24739J22299_10144766	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300004114\|Ga0062593_100965946	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300004463\|Ga0063356_100646191	All Organisms → cellular organisms → Bacteria	1442	Open in IMG/M
3300004463\|Ga0063356_101603726	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300004479\|Ga0062595_100691252	Not Available	817	Open in IMG/M
3300004479\|Ga0062595_100881041	Not Available	751	Open in IMG/M
3300004479\|Ga0062595_101173580	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300004479\|Ga0062595_101922867	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300005093\|Ga0062594_102110822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus ruber	606	Open in IMG/M
3300005328\|Ga0070676_10013061	All Organisms → cellular organisms → Bacteria	4551	Open in IMG/M
3300005330\|Ga0070690_100911516	Not Available	688	Open in IMG/M
3300005331\|Ga0070670_100129767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2176	Open in IMG/M
3300005339\|Ga0070660_101094666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	674	Open in IMG/M
3300005340\|Ga0070689_101765979	Not Available	564	Open in IMG/M
3300005344\|Ga0070661_101244137	Not Available	623	Open in IMG/M
3300005367\|Ga0070667_101295360	Not Available	683	Open in IMG/M
3300005406\|Ga0070703_10319716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus ruber	653	Open in IMG/M
3300005435\|Ga0070714_100556429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1099	Open in IMG/M
3300005435\|Ga0070714_101984454	Not Available	568	Open in IMG/M
3300005445\|Ga0070708_100777533	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300005548\|Ga0070665_100179768	All Organisms → cellular organisms → Bacteria	2116	Open in IMG/M
3300005563\|Ga0068855_101991038	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300005577\|Ga0068857_100839023	Not Available	879	Open in IMG/M
3300005615\|Ga0070702_100983692	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300005618\|Ga0068864_100017123	All Organisms → cellular organisms → Bacteria → Proteobacteria	6043	Open in IMG/M
3300006058\|Ga0075432_10212643	Not Available	770	Open in IMG/M
3300006175\|Ga0070712_100092204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2221	Open in IMG/M
3300006871\|Ga0075434_100583671	Not Available	1137	Open in IMG/M
3300007076\|Ga0075435_100202670	Not Available	1681	Open in IMG/M
3300007076\|Ga0075435_100591461	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300009011\|Ga0105251_10172874	Not Available	973	Open in IMG/M
3300009094\|Ga0111539_10343131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1738	Open in IMG/M
3300009094\|Ga0111539_11468035	Not Available	791	Open in IMG/M
3300009147\|Ga0114129_11218676	Not Available	936	Open in IMG/M
3300009147\|Ga0114129_12958473	Not Available	560	Open in IMG/M
3300009148\|Ga0105243_12219697	Not Available	586	Open in IMG/M
3300009148\|Ga0105243_12785351	Not Available	529	Open in IMG/M
3300009156\|Ga0111538_13830063	Not Available	521	Open in IMG/M
3300009162\|Ga0075423_10186870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2174	Open in IMG/M
3300009162\|Ga0075423_11504937	Not Available	722	Open in IMG/M
3300009176\|Ga0105242_13326548	Not Available	500	Open in IMG/M
3300009545\|Ga0105237_12335121	Not Available	545	Open in IMG/M
3300009553\|Ga0105249_12902918	Not Available	550	Open in IMG/M
3300010371\|Ga0134125_11277815	Not Available	801	Open in IMG/M
3300010375\|Ga0105239_11617242	Not Available	749	Open in IMG/M
3300010375\|Ga0105239_12924700	Not Available	557	Open in IMG/M
3300010396\|Ga0134126_11807771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	670	Open in IMG/M
3300010397\|Ga0134124_10220468	All Organisms → cellular organisms → Bacteria	1732	Open in IMG/M
3300010397\|Ga0134124_11804501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	646	Open in IMG/M
3300010397\|Ga0134124_13113380	Not Available	508	Open in IMG/M
3300010399\|Ga0134127_11441595	Not Available	760	Open in IMG/M
3300010401\|Ga0134121_10603564	Not Available	1027	Open in IMG/M
3300010401\|Ga0134121_11253188	Not Available	744	Open in IMG/M
3300010403\|Ga0134123_11785878	Not Available	668	Open in IMG/M
3300010403\|Ga0134123_12845077	Not Available	553	Open in IMG/M
3300012204\|Ga0137374_10695234	Not Available	764	Open in IMG/M
3300012212\|Ga0150985_106260961	Not Available	646	Open in IMG/M
3300012905\|Ga0157296_10244821	Not Available	598	Open in IMG/M
3300012909\|Ga0157290_10454862	Not Available	513	Open in IMG/M
3300012910\|Ga0157308_10415193	Not Available	526	Open in IMG/M
3300012912\|Ga0157306_10141809	Not Available	749	Open in IMG/M
3300012957\|Ga0164303_11166236	Not Available	561	Open in IMG/M
3300012958\|Ga0164299_10560204	Not Available	773	Open in IMG/M
3300012986\|Ga0164304_11280382	Not Available	596	Open in IMG/M
3300013096\|Ga0157307_1081947	Not Available	658	Open in IMG/M
3300013102\|Ga0157371_11234022	Not Available	577	Open in IMG/M
3300013104\|Ga0157370_10443158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1194	Open in IMG/M
3300013296\|Ga0157374_11532092	Not Available	690	Open in IMG/M
3300013296\|Ga0157374_12655880	Not Available	528	Open in IMG/M
3300013297\|Ga0157378_11094987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	833	Open in IMG/M
3300013306\|Ga0163162_10709567	Not Available	1127	Open in IMG/M
3300014326\|Ga0157380_12110095	Not Available	626	Open in IMG/M
3300014968\|Ga0157379_10174771	All Organisms → cellular organisms → Bacteria	1939	Open in IMG/M
3300015077\|Ga0173483_10318058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	769	Open in IMG/M
3300015200\|Ga0173480_10775398	Not Available	609	Open in IMG/M
3300015371\|Ga0132258_10322444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3809	Open in IMG/M
3300015371\|Ga0132258_13383375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1096	Open in IMG/M
3300015373\|Ga0132257_100726393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1235	Open in IMG/M
3300015374\|Ga0132255_100337358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2179	Open in IMG/M
3300017792\|Ga0163161_10753203	Not Available	815	Open in IMG/M
3300017792\|Ga0163161_11700900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	559	Open in IMG/M
3300018028\|Ga0184608_10344441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	655	Open in IMG/M
3300018061\|Ga0184619_10486496	Not Available	546	Open in IMG/M
3300019356\|Ga0173481_10084614	Not Available	1181	Open in IMG/M
3300019356\|Ga0173481_10598657	Not Available	579	Open in IMG/M
3300019361\|Ga0173482_10052558	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1330	Open in IMG/M
3300020081\|Ga0206354_10016194	Not Available	555	Open in IMG/M
3300020081\|Ga0206354_10549214	Not Available	584	Open in IMG/M
3300020082\|Ga0206353_10040512	Not Available	508	Open in IMG/M
3300025898\|Ga0207692_10941444	Not Available	569	Open in IMG/M
3300025904\|Ga0207647_10772566	Not Available	518	Open in IMG/M
3300025913\|Ga0207695_10943223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	742	Open in IMG/M
3300025917\|Ga0207660_10125930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1945	Open in IMG/M
3300025926\|Ga0207659_10801904	Not Available	809	Open in IMG/M
3300025935\|Ga0207709_11851563	Not Available	502	Open in IMG/M
3300025936\|Ga0207670_10745031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	813	Open in IMG/M
3300025941\|Ga0207711_11106120	Not Available	733	Open in IMG/M
3300025960\|Ga0207651_10151595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1805	Open in IMG/M
3300025961\|Ga0207712_11230308	Not Available	668	Open in IMG/M
3300025972\|Ga0207668_11443176	Not Available	621	Open in IMG/M
3300025986\|Ga0207658_11184143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	698	Open in IMG/M
3300025986\|Ga0207658_11518139	Not Available	613	Open in IMG/M
3300026023\|Ga0207677_11864058	Not Available	558	Open in IMG/M
3300026089\|Ga0207648_10497935	Not Available	1115	Open in IMG/M
3300026116\|Ga0207674_11022518	Not Available	796	Open in IMG/M
3300027907\|Ga0207428_10635964	Not Available	767	Open in IMG/M
3300027909\|Ga0209382_11416100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	697	Open in IMG/M
3300030903\|Ga0308206_1156297	Not Available	553	Open in IMG/M
3300030993\|Ga0308190_1151280	Not Available	552	Open in IMG/M
3300031092\|Ga0308204_10353425	Not Available	506	Open in IMG/M
3300031538\|Ga0310888_10140657	Not Available	1277	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	50.41%
Environmental	Environmental	49.59%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	50.41%
Terrestrial	Environmental → Terrestrial	47.97%
Aquatic	Environmental → Aquatic	1.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	35.77%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.63%
Sediment	Environmental → Aquatic → Sediment	1.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	26.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.57%
Loam	Environmental → Terrestrial → Soil → Loam	8.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.06%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.63%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	26.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.06%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.63%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.01%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	8.13%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.06%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.06%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.25%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.25%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.25%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.25%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.44%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.44%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.63%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001989	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03387150	2088090014	Soil	MKNAALALAVAMLALAGTPVMAENPVEPSAPGSDKTPGVTPNDANATAPKEKTPKQTGATNPDTLDPTKNTPGAESKN
ICCgaii200_07935831	2228664021	Soil	MKHAAIALAVATLVVAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETFKKTGATNPDTPDPTKNTPGAETKN
ICChiseqgaiiDRAFT_03479361	3300000033	Soil	ALAVAXAVXXAGTPVKAENPAEPGAPGSDKTVGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPKN*
ICChiseqgaiiDRAFT_07070232	3300000033	Soil	MKYTALVVAILALTGTPVLAENPVEPSSPGSDKTPGVTPNDAKAAPKDTSKATGATNPDTPDPTKNTPGSESKN*
INPhiseqgaiiFebDRAFT_1006495382	3300000364	Soil	MKYTALVVAILALTGXPVLAENPVEPSSPGSDKTPGVTPNDAKAAPKDTSKATGATNPDTPDPTKNTPGSESKN*
JGI1027J11758_129445302	3300000789	Soil	MKYTAFVVAILALAGRPVLAENPVEPSSPGSDKTPGVTPNDAKAAPKDTSKATGATNPDTPDPTKNTPGSESKN*
JGI1027J11758_130596921	3300000789	Soil	AGTPVMAENPVEPSAPGSDKTPGVTPNDANATAPKETPKQTGATNPNTPDPTKNTPGAESKN*
JGI1027J11758_130766591	3300000789	Soil	MKNAAIGLTFATLLLAGSPALAENPVEPSAPGSDKTPGVTPNDASADKPVIIVPAPDANKNTGAMNPDTPDPTKNTPGAESKN*
JGI11643J12802_101715934	3300000890	Soil	MKHAAIALAVATLVVAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETFKKTGATNPDTPDPTKNTPGAETKN*
JGI10214J12806_113790131	3300000891	Soil	MKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTVGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPKN*
JGI10216J12902_1059885121	3300000956	Soil	MKYAAVAVAMLALAATPVLAENPVEPSAPGSDKSPGVTPNDARASAPKDTSKPTGATNPETPDPTKNTPGAESKN*
JGI24739J22299_101447662	3300001989	Corn Rhizosphere	KHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPKN*
Ga0062593_1009659461	3300004114	Soil	MKNAALALAAAALALAGTPVMAENPVEPSAPGSDKTPGVTPNDANATAPKETPKQTGATNPNTPDPTKNTPGAESKN*
Ga0063356_1006461913	3300004463	Arabidopsis Thaliana Rhizosphere	MKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPKN*
Ga0063356_1016037262	3300004463	Arabidopsis Thaliana Rhizosphere	MKNAALALAVAMLALAGTPVMAENPVEPSAPGSDKTPGVTPNDANATAPKEKTPKQTGATNPDTLDPTKNTPGAESKN*
Ga0062595_1006912522	3300004479	Soil	MKHAAIALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETFKKTGATNPDTPDPTKNTPGAETKN*
Ga0062595_1008810411	3300004479	Soil	MKNAAIGLTFATLLLAGSPALAENPVEPSAPGSDKTPGVTPNDAKAAPTPPATTKNTGASNPDTPDPTKNTPGAETKN*
Ga0062595_1011735801	3300004479	Soil	MKYTALVVAILALAGTPVLAENPVEPSSPGSDKTPGVTPNDAKAAPKDTSKATGATNPDTPDPTKNTPGSESKN*
Ga0062595_1019228671	3300004479	Soil	ALAVAMLALAGTPVMAENPVEPSAPGSDKTPGVTPNDANATAPKEKTPKQTGATNPDTLDPTKNTPGAESKN*
Ga0062594_1021108221	3300005093	Soil	FRMKYAATALAVAILTLAGTPVLAENPVEPGAPGSDKTPGVTPNDAKAAPKPSATTKDTGALNPDTPDPTKNTPGAETKN*
Ga0070676_100130617	3300005328	Miscanthus Rhizosphere	MKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLDVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPKN*
Ga0070690_1009115162	3300005330	Switchgrass Rhizosphere	MKHAAIALTFATVLLAGTPVLAENPVEPSAPGSDKTPGVTPNDANVAPPIVIPAPEPRKNTGALNPDTPD
Ga0070670_1001297673	3300005331	Switchgrass Rhizosphere	MKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPRGGAEELIYD*
Ga0070660_1010946663	3300005339	Corn Rhizosphere	AIALTFSALLLAGAPALAENPVEPSAPGSDKTPGVTPNDASADKPVIIVPAPDATKNTGAMNPDTPDPTKNTPGAESKN*
Ga0070689_1017659792	3300005340	Switchgrass Rhizosphere	MKHAAIALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPKDTKASPPKETSKKTGATNPDTPDPTKNTPGAETKN*
Ga0070661_1012441372	3300005344	Corn Rhizosphere	MKHTAIALTFSALLLAGAPALAENPVEPSAPGSDKTPGVTPNDASADKPVIIVPAPDATKNTGAMNPDTPDPTKNTPGAESKN*
Ga0070667_1012953601	3300005367	Switchgrass Rhizosphere	MKRAVTALVVATLALAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETPKETGATNPDTPDPTKNT
Ga0070703_103197161	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPRRTDLRLGASCARAE
Ga0070714_1005564292	3300005435	Agricultural Soil	AGASEFCSPRRSPQMKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPKN*
Ga0070714_1019844541	3300005435	Agricultural Soil	MKRAVTALVVATLALAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETPKETGATNPDTPD
Ga0070708_1007775333	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAE
Ga0070665_1001797681	3300005548	Switchgrass Rhizosphere	MRHAAIALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETSKKTGATNPDTPDPTKNTPGAETKN*
Ga0068855_1019910381	3300005563	Corn Rhizosphere	RSQMKHAAIALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPKDTKASPPKETSKKTGATNPDTPDPTKNTPGAETKN*
Ga0068857_1008390232	3300005577	Corn Rhizosphere	MKRAVTALVVATLALAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETPKETGATNPNTPDPTK
Ga0070702_1009836921	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	ALAVAMLVLAGTPVKAENPVEPGAPGADKTPGVTPNDAKASPPKEIPKKTGATNPDTPDPTKNTPGAETKN*
Ga0068864_1000171231	3300005618	Switchgrass Rhizosphere	MKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPK
Ga0075432_102126432	3300006058	Populus Rhizosphere	MKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAESKN*
Ga0070712_1000922042	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKHAATALAVAMLVLAGTPVKAENPVEPGAPGADKTPGVTPNDAKASPPKEIPKKTGATNPDTPDPTKNTPGAETKN*
Ga0075434_1005836712	3300006871	Populus Rhizosphere	MKNAAIGLTFATLLLAGSPALAENPVEPSAPGSDKTPGVTPNDAKAAPTPPATTKNTGASNPDTPDPTKNTLGAETKN*
Ga0075435_1002026702	3300007076	Populus Rhizosphere	MCRGFAVLFPKEVSTNEEHAATAAVAMLVLAGTPVKAENPVEPGAPGSDKTPGVTPNDAKASPPKETPKETGATNPDRPDPTKNTPGAETKN*
Ga0075435_1005914611	3300007076	Populus Rhizosphere	MKHTAIALTFSALLLAGAPALAENPVEPSAPGSDKTPGVTPNDASADKPVIIVPAPDATKNTGAMNPDTPDPTKNTPGAESK
Ga0105251_101728742	3300009011	Switchgrass Rhizosphere	MKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDP
Ga0111539_103431312	3300009094	Populus Rhizosphere	MLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPKN*
Ga0111539_114680351	3300009094	Populus Rhizosphere	MKHAATAAVAMLVLAGTPVKAENPVEPGAPGSDKTPGVTPNDAKASPPKETPKETGATNPDRPDPTKNTPGAETKN*
Ga0114129_112186761	3300009147	Populus Rhizosphere	MKNAAVGLTLATLLLAGTPALAENPVEPSAPGSDKTPGVTPNDAKAAPAPPATTKNTGASNPDTPDPTKNTPGAETKN*
Ga0114129_129584731	3300009147	Populus Rhizosphere	VNQMKNAAIGLTFATLLLAGSPALAENPVEPSAPGSDKTPGVTPNDAKAAPTPPATTKNTGASNPDTPDPTKNTPGAETKN*
Ga0105243_122196971	3300009148	Miscanthus Rhizosphere	MKRAVTALVVATLALAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETPKETGATNPNTPDPTKNTP
Ga0105243_127853511	3300009148	Miscanthus Rhizosphere	MKYAATVLAVAMLALAGTPVLAENPVEPAAPGSDKTPGVTPNDAKAAPTPPATTKDTGAMNPDTPDPTKNTPGAESKN*
Ga0111538_138300631	3300009156	Populus Rhizosphere	MKHATTALAVAILALAGTLIMAENPVEPGAPGSDKTPGVTPNDAKAAPTPPATTKDTGASNPDTPDPTKNTPGAETKN*
Ga0075423_101868702	3300009162	Populus Rhizosphere	MKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNSGALNPDTPDPTKNTPGAEPKN*
Ga0075423_115049371	3300009162	Populus Rhizosphere	MKHATTALAVAILALAGTLIMAENPVEPGAPGSDKTPGVTPNDAKAAPTPPATTKDTGALNPDTPDPTKNTPGAETKN*
Ga0105242_133265481	3300009176	Miscanthus Rhizosphere	MKHAATALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKEIPKKTGATNPDTPDPTKNTPGAETKN*
Ga0105237_123351211	3300009545	Corn Rhizosphere	MKRAVTALVVATLTLAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETAKKTVATNPDTPDP
Ga0105249_129029181	3300009553	Switchgrass Rhizosphere	MKRAVTALVVATLALAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETPKETGATNPNTPDPTKNTPGAETKN*
Ga0134125_112778152	3300010371	Terrestrial Soil	MKRAVTALVVATLALAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETSKKTGATNPDTPDPTKNTPGAETKN*
Ga0105239_116172421	3300010375	Corn Rhizosphere	QPRRLSEMKHTAIALTFSALLLAGAPALAENPVEPSAPGSDKTPGVTPNDASADKPVIIVPAPDATKNTGAMNPDTPDPTKNTPGAESKN*
Ga0105239_129247001	3300010375	Corn Rhizosphere	MKHAATALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKEIPKKTGATNPDTPDPT
Ga0134126_118077712	3300010396	Terrestrial Soil	MKYTALVVAILALAGTPVLAENPVEPSSPGSDKTPGVTPNDAKAAPKDTSKATGSTNPDTPDPTKNTPGSESKN*
Ga0134124_102204681	3300010397	Terrestrial Soil	MRHAAIALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPKDTKASPPKETSKKTGATNPDTPDPTKNTPGAETKN*
Ga0134124_118045012	3300010397	Terrestrial Soil	MKHVVTALVVATLALAGTPVRAENPVEPAAPGSDKTPGVTPNDAKSAPTPPATTKNTGALNPDTPDPTKNTPGAESKN*
Ga0134124_131133801	3300010397	Terrestrial Soil	PGRSLMKRAVTALVVATLALAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETPKETGATNPNTPDPTKNMPGAETKN*
Ga0134127_114415951	3300010399	Terrestrial Soil	MKRAVTALVVATLVLAGTPVRAENPVEPGAPGSDKTTGVTPNDAKASPPKETPKETGATNPDTPHPTKNTPGAETKN*
Ga0134121_106035643	3300010401	Terrestrial Soil	MKHTAIALTFSALLLAGAPALAENPVEPSAPGSDKTPGVTPNDAKAAPTPPATTKNTGASNPDTPDPTKNTPGAETKN*
Ga0134121_112531882	3300010401	Terrestrial Soil	MKHAAIALTFATVLLAGTPVLAENPVEPSAPGSDKTPGVTPNDANVAPPIVIPAPEPRKNTGALNPDTPDPTK
Ga0134123_117858782	3300010403	Terrestrial Soil	MKHAAIALTFATVLLAGTPVLAENPVEPSAPGSDKTPGVTPNDANVAPPIVIPAPEPRKNTGALNPDTP
Ga0134123_128450772	3300010403	Terrestrial Soil	MKHVATALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPKDTKASPPKETSKKTGATNPDTPDPTKNTPGADTKN*
Ga0137374_106952341	3300012204	Vadose Zone Soil	MKNTAIALTFATLLLAGTPVLAENPVEPGAPGSDKAPGVTPNDASSAETIVVVPAPDVRKNTGASNPDTPDPTKNTPGAESKN*
Ga0150985_1062609611	3300012212	Avena Fatua Rhizosphere	RRLLQMKNTAIALTFATLLLAGTPVLAENPVEPGAPGSDKSPGVTPNDAKAAPTDATKTDDATKQTGASNPDTPDPTKNTPGAESKN*
Ga0157296_102448211	3300012905	Soil	MKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKPAQTPPATTKNTSALNPDTPDPTKNTPGAEPKN*
Ga0157290_104548621	3300012909	Soil	MKHAAIALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETSKKTGATNPDTPDPTKNTPGAETKN*
Ga0157308_104151931	3300012910	Soil	RSQMKHVATALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETSKKTGATNPDTPDPTKNTPGAETKN*
Ga0157306_101418091	3300012912	Soil	MKHVVTALVVATLALAGTPVRAENPVEPAAPGSDKTPGVTPNDAKSAPTPPATTKNTGALNPDTPD
Ga0164303_111662362	3300012957	Soil	MKPAVTALVVATLALAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETPKETGATNPATPDP
Ga0164299_105602042	3300012958	Soil	MKHAATALAVAMLVLAGTPGRAENPVEPGAPGSDKTPGVTPNDAKASPPKETPKETGATNRATPDPTKNTPGAETKN*
Ga0164304_112803821	3300012986	Soil	MKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTGAEELIYD*
Ga0157307_10819471	3300013096	Soil	MLVLAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETSKKTGATNPDTPDPTK
Ga0157371_112340221	3300013102	Corn Rhizosphere	MKRAVTALVVATLALAGTPVKAENPVEPGAPGSDKTPGVTPNDAKANPPKETSKKTGATNPDTPDPTKNTPGAETKN*
Ga0157370_104431581	3300013104	Corn Rhizosphere	MKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAERKN*
Ga0157374_115320922	3300013296	Miscanthus Rhizosphere	MKYTAFVVAILALAGTPVLAENPVEPSSPGSDKTPGVTPNDAKAAPKDTSQATGATNPDTPDPTKNTPGSESKN*
Ga0157374_126558802	3300013296	Miscanthus Rhizosphere	MKHTAIALTFSALVLAGAPALAENPVEPSAPGSDKTPGVTPNDASADKPVIIVPAPDATKNTGAMNPDTPDPTKNTPGAESKN*
Ga0157378_110949871	3300013297	Miscanthus Rhizosphere	RRSPQMKHAATALAVAMLVLAGTPVKAENPVEPGAPGADKTPGVTPNDAKASPPKEIPKKTGATNPDTPDPTKNTPGAETKN*
Ga0163162_107095672	3300013306	Switchgrass Rhizosphere	MLALAGTPVLAENPVEPAAPGSDKTPGVTPNDAKAAPTPPATTKDTGAMNPDTPDPTKNTPGAESKN*
Ga0157380_121100951	3300014326	Switchgrass Rhizosphere	MLVLAGTPVKAENPVEPGAPGADKTPGVTPNDAKANPPKEIPKKTGATNPDTPDPTKNTPGAETKN*
Ga0157379_101747712	3300014968	Switchgrass Rhizosphere	MKHAATALAVAMLVLAGTPVKAENPVEPGSPGADKTPGVTPNDAKASPPKEIPKKTGATNPDTPDPTKNTPGAETKN*
Ga0173483_103180582	3300015077	Soil	MLVLAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETSKKTGATNPDTPDPTKNTPGA
Ga0173480_107753981	3300015200	Soil	MKHAATALAVAMLVLAGTPVQAENPVEPGAPGADKTPGVTPNDAKASPPKEIPKKTGATNPDTP
Ga0132258_103224446	3300015371	Arabidopsis Rhizosphere	MLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNAGALKPDTPDPTKNTPGAEPKN*
Ga0132258_133833753	3300015371	Arabidopsis Rhizosphere	ATVALLATPALAENPVEPGSPGSDKTPGVTPNDAKASPTVDKPKNTGAENPNTPDPTSNTPGAETKK*
Ga0132257_1007263933	3300015373	Arabidopsis Rhizosphere	MKNVTRAMILATVALLATPALAENPVEPGSPGSDKTPGVTPNDAKASPTVDKPKNTGAENPNTPDPTSNTPGAEPKK*
Ga0132255_1003373582	3300015374	Arabidopsis Rhizosphere	MKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNAGALKPDTPDPTKNTPGAEPKN*
Ga0163161_107532032	3300017792	Switchgrass Rhizosphere	MKYAATVLAVAMLALAGTPVLAENPVEPAAPGSDKTPGVTPNDAKAAPTPPATTKDTGAMNPDTPDPTKNTPGAESKN
Ga0163161_117009001	3300017792	Switchgrass Rhizosphere	HQPRRLSEMKHTAIALTFSALLLAGAPALAENPVEPSAPGSDKTPGVTPNDASADKPVIIVPAPDATKNTGAMNPDTPDPTKNTPGAESKN
Ga0184608_103444411	3300018028	Groundwater Sediment	MKNTAIALTFATLLLAGTPVLAENPVEPGAPGSDKSPGVTPNDAKAAPTDATKTDDATKQTGASNPDTPDPTKNTPGAESKN
Ga0184619_104864961	3300018061	Groundwater Sediment	MKNTAIALTFATLLLAGTPVLAENPVEPGAPGSDKSPGVTPNDAKAAPTDATKTDDTTKQTGASNPDTPDPTKNTPGAESKN
Ga0173481_100846142	3300019356	Soil	MKHAATALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETPKETGATNPDTPD
Ga0173481_105986571	3300019356	Soil	MKHAATALAVAMLVLAGTPVKAENPVEPGAPGADKTPGVTPNDAKASPPKEIPKKTGATNPDTPDPTKNTPGAETKN
Ga0173482_100525582	3300019361	Soil	MRHAAIALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPKDTKASPPKETSKKTGATNPDTPDPTKNTPGAETKN
Ga0206354_100161942	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MKRAVTALVIATLALAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETSKKTGATNPDTPDPTKNTPGAETKN
Ga0206354_105492141	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MEHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPKN
Ga0206353_100405121	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPKN
Ga0207692_109414441	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MKHAAIALTFATLLLAGTPVLAENPVEPSAPGSDKTPGVTPNDANVAPPIVIPAPEPRKNTGALNPD
Ga0207647_107725661	3300025904	Corn Rhizosphere	MKRAVTALVVATLALAGTPVKAENPVEPGAPGSDKTPGVTPNDAKANPPKETSKKTGATNPDTPDPTKNTPGAETKN
Ga0207695_109432232	3300025913	Corn Rhizosphere	QMKHAATALAVAMLVLAGTPVKAENPVEPGAPGADKTPGVTPNDAKASPPKEIPKKTGATNPDTPDPTKNTPGAETKN
Ga0207660_101259302	3300025917	Corn Rhizosphere	MKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTVGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPKN
Ga0207659_108019041	3300025926	Miscanthus Rhizosphere	MKHAAIALTFATVLLAGTPVLAENPVEPSAPGSDKTPGVTPNDANVAPPIVIPAPEPRKNTGALNPDTPDPTKNTHGAESKN
Ga0207709_118515631	3300025935	Miscanthus Rhizosphere	MKHAAIALTFATVLLAGTPVLAENPVEPSAPGSDKTPGVTPNDANVAPPIVIPAPEPRKNTGALNPDTPDPTKN
Ga0207670_107450311	3300025936	Switchgrass Rhizosphere	MKRAVTALVVATLALAGTPVRAENPVEPGAPGSDKTPGVTPKDTKASPPKETSKKTGASNPDTPDPTKNTPGAETKN
Ga0207711_111061201	3300025941	Switchgrass Rhizosphere	MKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPRRTDLRL
Ga0207651_101515951	3300025960	Switchgrass Rhizosphere	MKHAATALAVAMLVLAGTPVKAENPAEPGAPCSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPKN
Ga0207712_112303081	3300025961	Switchgrass Rhizosphere	MKRAVTALVVATLALAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETSKKTGATNPDTPDPTKNTPGAETKN
Ga0207668_114431761	3300025972	Switchgrass Rhizosphere	MRHAAIALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKEIPKKTGATNPDTPDPTKNTPGAETKN
Ga0207658_111841432	3300025986	Switchgrass Rhizosphere	AATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPKN
Ga0207658_115181391	3300025986	Switchgrass Rhizosphere	MKYTALVVAILALAGTPVLAENPVEPSSPGADKTPGVTPNDAKAAPKDTSKATGATNPDTPDPTKNT
Ga0207677_118640581	3300026023	Miscanthus Rhizosphere	MKHAAIALTFATVLLAGTPVLAENPVEPSAPGSDKTPGVTPNDANVAPPIVIPAPEPRKNTGALNPDT
Ga0207648_104979352	3300026089	Miscanthus Rhizosphere	MKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTPGVTPNDAKSAPTPPATTKNTGALNPDTPDPTKNTPGAESKN
Ga0207674_110225182	3300026116	Corn Rhizosphere	MKRAVTALVVATLALAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETPKETGATNPNTPDPTKNMPGAETKN
Ga0207428_106359641	3300027907	Populus Rhizosphere	MKNAAIGLTFATLLLAGSPALAENPVEPSAPGSDKTPGVTPNDAKAAPTPPATTKNTGASNPDTPDPTKNTPGAETKN
Ga0207428_107230801	3300027907	Populus Rhizosphere	MKHAAIALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETPKETGATNPD
Ga0209382_114161001	3300027909	Populus Rhizosphere	AGAPALAENPVEPSAPGSDKTPGVTPNDASADKPVIIVPAPDATKNTGAMNPDTPDPTKNTPGAESKN
Ga0308206_11562972	3300030903	Soil	LQMKNTAIALTFATLLLAGTPVLAENPVEPGAPGSDKSPGVTPNDAKAAPTDATKTDDATKQTGASNPDTPDPTKNTPGAESKN
Ga0308190_11512801	3300030993	Soil	FATLLLAGTPVLAENPVEPGAPGSDKSPGVTPNDAKAGPTDATKTDDTTKQTGASNPDTPDPTKNTPGAESKN
Ga0308204_103534251	3300031092	Soil	RRLLQMKNTAIALTFATLLLAGTPVLAENPVEPGAPGSDKSPGVTPNGAKAAPTDATKTNDATKQTGASNPDTPDPTKNTPGAESKN
Ga0310888_101406571	3300031538	Soil	MKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGGGAEELIYD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070412

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences