NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F070412

Metagenome / Metatranscriptome Family F070412

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F070412
Family Type Metagenome / Metatranscriptome
Number of Sequences 123
Average Sequence Length 76 residues
Representative Sequence MKHAAIALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETSKKTGATNPDTPDPTKNTPGAETKN
Number of Associated Samples 98
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 72.95 %
% of genes near scaffold ends (potentially truncated) 41.46 %
% of genes from short scaffolds (< 2000 bps) 91.87 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (59.350 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(13.008 % of family members)
Environment Ontology (ENVO) Unclassified
(43.902 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(62.602 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120
1GPIPI_03387150
2ICCgaii200_07935831
3ICChiseqgaiiDRAFT_03479361
4ICChiseqgaiiDRAFT_07070232
5INPhiseqgaiiFebDRAFT_1006495382
6JGI1027J11758_129445302
7JGI1027J11758_130596921
8JGI1027J11758_130766591
9JGI11643J12802_101715934
10JGI10214J12806_113790131
11JGI10216J12902_1059885121
12JGI24739J22299_101447662
13Ga0062593_1009659461
14Ga0063356_1006461913
15Ga0063356_1016037262
16Ga0062595_1006912522
17Ga0062595_1008810411
18Ga0062595_1011735801
19Ga0062595_1019228671
20Ga0062594_1021108221
21Ga0070676_100130617
22Ga0070690_1009115162
23Ga0070670_1001297673
24Ga0070660_1010946663
25Ga0070689_1017659792
26Ga0070661_1012441372
27Ga0070667_1012953601
28Ga0070703_103197161
29Ga0070714_1005564292
30Ga0070714_1019844541
31Ga0070708_1007775333
32Ga0070665_1001797681
33Ga0068855_1019910381
34Ga0068857_1008390232
35Ga0070702_1009836921
36Ga0068864_1000171231
37Ga0075432_102126432
38Ga0070712_1000922042
39Ga0075434_1005836712
40Ga0075435_1002026702
41Ga0075435_1005914611
42Ga0105251_101728742
43Ga0111539_103431312
44Ga0111539_114680351
45Ga0114129_112186761
46Ga0114129_129584731
47Ga0105243_122196971
48Ga0105243_127853511
49Ga0111538_138300631
50Ga0075423_101868702
51Ga0075423_115049371
52Ga0105242_133265481
53Ga0105237_123351211
54Ga0105249_129029181
55Ga0134125_112778152
56Ga0105239_116172421
57Ga0105239_129247001
58Ga0134126_118077712
59Ga0134124_102204681
60Ga0134124_118045012
61Ga0134124_131133801
62Ga0134127_114415951
63Ga0134121_106035643
64Ga0134121_112531882
65Ga0134123_117858782
66Ga0134123_128450772
67Ga0137374_106952341
68Ga0150985_1062609611
69Ga0157296_102448211
70Ga0157290_104548621
71Ga0157308_104151931
72Ga0157306_101418091
73Ga0164303_111662362
74Ga0164299_105602042
75Ga0164304_112803821
76Ga0157307_10819471
77Ga0157371_112340221
78Ga0157370_104431581
79Ga0157374_115320922
80Ga0157374_126558802
81Ga0157378_110949871
82Ga0163162_107095672
83Ga0157380_121100951
84Ga0157379_101747712
85Ga0173483_103180582
86Ga0173480_107753981
87Ga0132258_103224446
88Ga0132258_133833753
89Ga0132257_1007263933
90Ga0132255_1003373582
91Ga0163161_107532032
92Ga0163161_117009001
93Ga0184608_103444411
94Ga0184619_104864961
95Ga0173481_100846142
96Ga0173481_105986571
97Ga0173482_100525582
98Ga0206354_100161942
99Ga0206354_105492141
100Ga0206353_100405121
101Ga0207692_109414441
102Ga0207647_107725661
103Ga0207695_109432232
104Ga0207660_101259302
105Ga0207659_108019041
106Ga0207709_118515631
107Ga0207670_107450311
108Ga0207711_111061201
109Ga0207651_101515951
110Ga0207712_112303081
111Ga0207668_114431761
112Ga0207658_111841432
113Ga0207658_115181391
114Ga0207677_118640581
115Ga0207648_104979352
116Ga0207674_110225182
117Ga0207428_106359641
118Ga0207428_107230801
119Ga0209382_114161001
120Ga0308206_11562972
121Ga0308190_11512801
122Ga0308204_103534251
123Ga0310888_101406571
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: Yes Secondary Structure distribution: α-helix: 14.29%    β-sheet: 0.00%    Coil/Unstructured: 85.71%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

10203040506070MKHAAIALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETSKKTGATNPDTPDPTKNTPGAETKNSequenceα-helicesβ-strandsCoilSS Conf. scoreDisordered RegionsSignal Peptide
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.23
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
40.7%59.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Soil
Vadose Zone Soil
Terrestrial Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Agricultural Soil
Arabidopsis Rhizosphere
Avena Fatua Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
13.0%8.1%4.9%8.9%4.1%3.3%4.1%11.4%3.3%3.3%3.3%5.7%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPIPI_033871502088090014SoilMKNAALALAVAMLALAGTPVMAENPVEPSAPGSDKTPGVTPNDANATAPKEKTPKQTGATNPDTLDPTKNTPGAESKN
ICCgaii200_079358312228664021SoilMKHAAIALAVATLVVAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETFKKTGATNPDTPDPTKNTPGAETKN
ICChiseqgaiiDRAFT_034793613300000033SoilALAVAXAVXXAGTPVKAENPAEPGAPGSDKTVGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPKN*
ICChiseqgaiiDRAFT_070702323300000033SoilMKYTALVVAILALTGTPVLAENPVEPSSPGSDKTPGVTPNDAKAAPKDTSKATGATNPDTPDPTKNTPGSESKN*
INPhiseqgaiiFebDRAFT_10064953823300000364SoilMKYTALVVAILALTGXPVLAENPVEPSSPGSDKTPGVTPNDAKAAPKDTSKATGATNPDTPDPTKNTPGSESKN*
JGI1027J11758_1294453023300000789SoilMKYTAFVVAILALAGRPVLAENPVEPSSPGSDKTPGVTPNDAKAAPKDTSKATGATNPDTPDPTKNTPGSESKN*
JGI1027J11758_1305969213300000789SoilAGTPVMAENPVEPSAPGSDKTPGVTPNDANATAPKETPKQTGATNPNTPDPTKNTPGAESKN*
JGI1027J11758_1307665913300000789SoilMKNAAIGLTFATLLLAGSPALAENPVEPSAPGSDKTPGVTPNDASADKPVIIVPAPDANKNTGAMNPDTPDPTKNTPGAESKN*
JGI11643J12802_1017159343300000890SoilMKHAAIALAVATLVVAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETFKKTGATNPDTPDPTKNTPGAETKN*
JGI10214J12806_1137901313300000891SoilMKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTVGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPKN*
JGI10216J12902_10598851213300000956SoilMKYAAVAVAMLALAATPVLAENPVEPSAPGSDKSPGVTPNDARASAPKDTSKPTGATNPETPDPTKNTPGAESKN*
JGI24739J22299_1014476623300001989Corn RhizosphereKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPKN*
Ga0062593_10096594613300004114SoilMKNAALALAAAALALAGTPVMAENPVEPSAPGSDKTPGVTPNDANATAPKETPKQTGATNPNTPDPTKNTPGAESKN*
Ga0063356_10064619133300004463Arabidopsis Thaliana RhizosphereMKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPKN*
Ga0063356_10160372623300004463Arabidopsis Thaliana RhizosphereMKNAALALAVAMLALAGTPVMAENPVEPSAPGSDKTPGVTPNDANATAPKEKTPKQTGATNPDTLDPTKNTPGAESKN*
Ga0062595_10069125223300004479SoilMKHAAIALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETFKKTGATNPDTPDPTKNTPGAETKN*
Ga0062595_10088104113300004479SoilMKNAAIGLTFATLLLAGSPALAENPVEPSAPGSDKTPGVTPNDAKAAPTPPATTKNTGASNPDTPDPTKNTPGAETKN*
Ga0062595_10117358013300004479SoilMKYTALVVAILALAGTPVLAENPVEPSSPGSDKTPGVTPNDAKAAPKDTSKATGATNPDTPDPTKNTPGSESKN*
Ga0062595_10192286713300004479SoilALAVAMLALAGTPVMAENPVEPSAPGSDKTPGVTPNDANATAPKEKTPKQTGATNPDTLDPTKNTPGAESKN*
Ga0062594_10211082213300005093SoilFRMKYAATALAVAILTLAGTPVLAENPVEPGAPGSDKTPGVTPNDAKAAPKPSATTKDTGALNPDTPDPTKNTPGAETKN*
Ga0070676_1001306173300005328Miscanthus RhizosphereMKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLDVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPKN*
Ga0070690_10091151623300005330Switchgrass RhizosphereMKHAAIALTFATVLLAGTPVLAENPVEPSAPGSDKTPGVTPNDANVAPPIVIPAPEPRKNTGALNPDTPD
Ga0070670_10012976733300005331Switchgrass RhizosphereMKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPRGGAEELIYD*
Ga0070660_10109466633300005339Corn RhizosphereAIALTFSALLLAGAPALAENPVEPSAPGSDKTPGVTPNDASADKPVIIVPAPDATKNTGAMNPDTPDPTKNTPGAESKN*
Ga0070689_10176597923300005340Switchgrass RhizosphereMKHAAIALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPKDTKASPPKETSKKTGATNPDTPDPTKNTPGAETKN*
Ga0070661_10124413723300005344Corn RhizosphereMKHTAIALTFSALLLAGAPALAENPVEPSAPGSDKTPGVTPNDASADKPVIIVPAPDATKNTGAMNPDTPDPTKNTPGAESKN*
Ga0070667_10129536013300005367Switchgrass RhizosphereMKRAVTALVVATLALAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETPKETGATNPDTPDPTKNT
Ga0070703_1031971613300005406Corn, Switchgrass And Miscanthus RhizosphereMKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPRRTDLRLGASCARAE
Ga0070714_10055642923300005435Agricultural SoilAGASEFCSPRRSPQMKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPKN*
Ga0070714_10198445413300005435Agricultural SoilMKRAVTALVVATLALAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETPKETGATNPDTPD
Ga0070708_10077753333300005445Corn, Switchgrass And Miscanthus RhizosphereMKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAE
Ga0070665_10017976813300005548Switchgrass RhizosphereMRHAAIALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETSKKTGATNPDTPDPTKNTPGAETKN*
Ga0068855_10199103813300005563Corn RhizosphereRSQMKHAAIALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPKDTKASPPKETSKKTGATNPDTPDPTKNTPGAETKN*
Ga0068857_10083902323300005577Corn RhizosphereMKRAVTALVVATLALAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETPKETGATNPNTPDPTK
Ga0070702_10098369213300005615Corn, Switchgrass And Miscanthus RhizosphereALAVAMLVLAGTPVKAENPVEPGAPGADKTPGVTPNDAKASPPKEIPKKTGATNPDTPDPTKNTPGAETKN*
Ga0068864_10001712313300005618Switchgrass RhizosphereMKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPK
Ga0075432_1021264323300006058Populus RhizosphereMKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAESKN*
Ga0070712_10009220423300006175Corn, Switchgrass And Miscanthus RhizosphereMKHAATALAVAMLVLAGTPVKAENPVEPGAPGADKTPGVTPNDAKASPPKEIPKKTGATNPDTPDPTKNTPGAETKN*
Ga0075434_10058367123300006871Populus RhizosphereMKNAAIGLTFATLLLAGSPALAENPVEPSAPGSDKTPGVTPNDAKAAPTPPATTKNTGASNPDTPDPTKNTLGAETKN*
Ga0075435_10020267023300007076Populus RhizosphereMCRGFAVLFPKEVSTNEEHAATAAVAMLVLAGTPVKAENPVEPGAPGSDKTPGVTPNDAKASPPKETPKETGATNPDRPDPTKNTPGAETKN*
Ga0075435_10059146113300007076Populus RhizosphereMKHTAIALTFSALLLAGAPALAENPVEPSAPGSDKTPGVTPNDASADKPVIIVPAPDATKNTGAMNPDTPDPTKNTPGAESK
Ga0105251_1017287423300009011Switchgrass RhizosphereMKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDP
Ga0111539_1034313123300009094Populus RhizosphereMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPKN*
Ga0111539_1146803513300009094Populus RhizosphereMKHAATAAVAMLVLAGTPVKAENPVEPGAPGSDKTPGVTPNDAKASPPKETPKETGATNPDRPDPTKNTPGAETKN*
Ga0114129_1121867613300009147Populus RhizosphereMKNAAVGLTLATLLLAGTPALAENPVEPSAPGSDKTPGVTPNDAKAAPAPPATTKNTGASNPDTPDPTKNTPGAETKN*
Ga0114129_1295847313300009147Populus RhizosphereVNQMKNAAIGLTFATLLLAGSPALAENPVEPSAPGSDKTPGVTPNDAKAAPTPPATTKNTGASNPDTPDPTKNTPGAETKN*
Ga0105243_1221969713300009148Miscanthus RhizosphereMKRAVTALVVATLALAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETPKETGATNPNTPDPTKNTP
Ga0105243_1278535113300009148Miscanthus RhizosphereMKYAATVLAVAMLALAGTPVLAENPVEPAAPGSDKTPGVTPNDAKAAPTPPATTKDTGAMNPDTPDPTKNTPGAESKN*
Ga0111538_1383006313300009156Populus RhizosphereMKHATTALAVAILALAGTLIMAENPVEPGAPGSDKTPGVTPNDAKAAPTPPATTKDTGASNPDTPDPTKNTPGAETKN*
Ga0075423_1018687023300009162Populus RhizosphereMKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNSGALNPDTPDPTKNTPGAEPKN*
Ga0075423_1150493713300009162Populus RhizosphereMKHATTALAVAILALAGTLIMAENPVEPGAPGSDKTPGVTPNDAKAAPTPPATTKDTGALNPDTPDPTKNTPGAETKN*
Ga0105242_1332654813300009176Miscanthus RhizosphereMKHAATALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKEIPKKTGATNPDTPDPTKNTPGAETKN*
Ga0105237_1233512113300009545Corn RhizosphereMKRAVTALVVATLTLAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETAKKTVATNPDTPDP
Ga0105249_1290291813300009553Switchgrass RhizosphereMKRAVTALVVATLALAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETPKETGATNPNTPDPTKNTPGAETKN*
Ga0134125_1127781523300010371Terrestrial SoilMKRAVTALVVATLALAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETSKKTGATNPDTPDPTKNTPGAETKN*
Ga0105239_1161724213300010375Corn RhizosphereQPRRLSEMKHTAIALTFSALLLAGAPALAENPVEPSAPGSDKTPGVTPNDASADKPVIIVPAPDATKNTGAMNPDTPDPTKNTPGAESKN*
Ga0105239_1292470013300010375Corn RhizosphereMKHAATALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKEIPKKTGATNPDTPDPT
Ga0134126_1180777123300010396Terrestrial SoilMKYTALVVAILALAGTPVLAENPVEPSSPGSDKTPGVTPNDAKAAPKDTSKATGSTNPDTPDPTKNTPGSESKN*
Ga0134124_1022046813300010397Terrestrial SoilMRHAAIALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPKDTKASPPKETSKKTGATNPDTPDPTKNTPGAETKN*
Ga0134124_1180450123300010397Terrestrial SoilMKHVVTALVVATLALAGTPVRAENPVEPAAPGSDKTPGVTPNDAKSAPTPPATTKNTGALNPDTPDPTKNTPGAESKN*
Ga0134124_1311338013300010397Terrestrial SoilPGRSLMKRAVTALVVATLALAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETPKETGATNPNTPDPTKNMPGAETKN*
Ga0134127_1144159513300010399Terrestrial SoilMKRAVTALVVATLVLAGTPVRAENPVEPGAPGSDKTTGVTPNDAKASPPKETPKETGATNPDTPHPTKNTPGAETKN*
Ga0134121_1060356433300010401Terrestrial SoilMKHTAIALTFSALLLAGAPALAENPVEPSAPGSDKTPGVTPNDAKAAPTPPATTKNTGASNPDTPDPTKNTPGAETKN*
Ga0134121_1125318823300010401Terrestrial SoilMKHAAIALTFATVLLAGTPVLAENPVEPSAPGSDKTPGVTPNDANVAPPIVIPAPEPRKNTGALNPDTPDPTK
Ga0134123_1178587823300010403Terrestrial SoilMKHAAIALTFATVLLAGTPVLAENPVEPSAPGSDKTPGVTPNDANVAPPIVIPAPEPRKNTGALNPDTP
Ga0134123_1284507723300010403Terrestrial SoilMKHVATALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPKDTKASPPKETSKKTGATNPDTPDPTKNTPGADTKN*
Ga0137374_1069523413300012204Vadose Zone SoilMKNTAIALTFATLLLAGTPVLAENPVEPGAPGSDKAPGVTPNDASSAETIVVVPAPDVRKNTGASNPDTPDPTKNTPGAESKN*
Ga0150985_10626096113300012212Avena Fatua RhizosphereRRLLQMKNTAIALTFATLLLAGTPVLAENPVEPGAPGSDKSPGVTPNDAKAAPTDATKTDDATKQTGASNPDTPDPTKNTPGAESKN*
Ga0157296_1024482113300012905SoilMKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKPAQTPPATTKNTSALNPDTPDPTKNTPGAEPKN*
Ga0157290_1045486213300012909SoilMKHAAIALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETSKKTGATNPDTPDPTKNTPGAETKN*
Ga0157308_1041519313300012910SoilRSQMKHVATALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETSKKTGATNPDTPDPTKNTPGAETKN*
Ga0157306_1014180913300012912SoilMKHVVTALVVATLALAGTPVRAENPVEPAAPGSDKTPGVTPNDAKSAPTPPATTKNTGALNPDTPD
Ga0164303_1116623623300012957SoilMKPAVTALVVATLALAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETPKETGATNPATPDP
Ga0164299_1056020423300012958SoilMKHAATALAVAMLVLAGTPGRAENPVEPGAPGSDKTPGVTPNDAKASPPKETPKETGATNRATPDPTKNTPGAETKN*
Ga0164304_1128038213300012986SoilMKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTGAEELIYD*
Ga0157307_108194713300013096SoilMLVLAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETSKKTGATNPDTPDPTK
Ga0157371_1123402213300013102Corn RhizosphereMKRAVTALVVATLALAGTPVKAENPVEPGAPGSDKTPGVTPNDAKANPPKETSKKTGATNPDTPDPTKNTPGAETKN*
Ga0157370_1044315813300013104Corn RhizosphereMKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAERKN*
Ga0157374_1153209223300013296Miscanthus RhizosphereMKYTAFVVAILALAGTPVLAENPVEPSSPGSDKTPGVTPNDAKAAPKDTSQATGATNPDTPDPTKNTPGSESKN*
Ga0157374_1265588023300013296Miscanthus RhizosphereMKHTAIALTFSALVLAGAPALAENPVEPSAPGSDKTPGVTPNDASADKPVIIVPAPDATKNTGAMNPDTPDPTKNTPGAESKN*
Ga0157378_1109498713300013297Miscanthus RhizosphereRRSPQMKHAATALAVAMLVLAGTPVKAENPVEPGAPGADKTPGVTPNDAKASPPKEIPKKTGATNPDTPDPTKNTPGAETKN*
Ga0163162_1070956723300013306Switchgrass RhizosphereMLALAGTPVLAENPVEPAAPGSDKTPGVTPNDAKAAPTPPATTKDTGAMNPDTPDPTKNTPGAESKN*
Ga0157380_1211009513300014326Switchgrass RhizosphereMLVLAGTPVKAENPVEPGAPGADKTPGVTPNDAKANPPKEIPKKTGATNPDTPDPTKNTPGAETKN*
Ga0157379_1017477123300014968Switchgrass RhizosphereMKHAATALAVAMLVLAGTPVKAENPVEPGSPGADKTPGVTPNDAKASPPKEIPKKTGATNPDTPDPTKNTPGAETKN*
Ga0173483_1031805823300015077SoilMLVLAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETSKKTGATNPDTPDPTKNTPGA
Ga0173480_1077539813300015200SoilMKHAATALAVAMLVLAGTPVQAENPVEPGAPGADKTPGVTPNDAKASPPKEIPKKTGATNPDTP
Ga0132258_1032244463300015371Arabidopsis RhizosphereMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNAGALKPDTPDPTKNTPGAEPKN*
Ga0132258_1338337533300015371Arabidopsis RhizosphereATVALLATPALAENPVEPGSPGSDKTPGVTPNDAKASPTVDKPKNTGAENPNTPDPTSNTPGAETKK*
Ga0132257_10072639333300015373Arabidopsis RhizosphereMKNVTRAMILATVALLATPALAENPVEPGSPGSDKTPGVTPNDAKASPTVDKPKNTGAENPNTPDPTSNTPGAEPKK*
Ga0132255_10033735823300015374Arabidopsis RhizosphereMKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNAGALKPDTPDPTKNTPGAEPKN*
Ga0163161_1075320323300017792Switchgrass RhizosphereMKYAATVLAVAMLALAGTPVLAENPVEPAAPGSDKTPGVTPNDAKAAPTPPATTKDTGAMNPDTPDPTKNTPGAESKN
Ga0163161_1170090013300017792Switchgrass RhizosphereHQPRRLSEMKHTAIALTFSALLLAGAPALAENPVEPSAPGSDKTPGVTPNDASADKPVIIVPAPDATKNTGAMNPDTPDPTKNTPGAESKN
Ga0184608_1034444113300018028Groundwater SedimentMKNTAIALTFATLLLAGTPVLAENPVEPGAPGSDKSPGVTPNDAKAAPTDATKTDDATKQTGASNPDTPDPTKNTPGAESKN
Ga0184619_1048649613300018061Groundwater SedimentMKNTAIALTFATLLLAGTPVLAENPVEPGAPGSDKSPGVTPNDAKAAPTDATKTDDTTKQTGASNPDTPDPTKNTPGAESKN
Ga0173481_1008461423300019356SoilMKHAATALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETPKETGATNPDTPD
Ga0173481_1059865713300019356SoilMKHAATALAVAMLVLAGTPVKAENPVEPGAPGADKTPGVTPNDAKASPPKEIPKKTGATNPDTPDPTKNTPGAETKN
Ga0173482_1005255823300019361SoilMRHAAIALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPKDTKASPPKETSKKTGATNPDTPDPTKNTPGAETKN
Ga0206354_1001619423300020081Corn, Switchgrass And Miscanthus RhizosphereMKRAVTALVIATLALAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETSKKTGATNPDTPDPTKNTPGAETKN
Ga0206354_1054921413300020081Corn, Switchgrass And Miscanthus RhizosphereMEHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPKN
Ga0206353_1004051213300020082Corn, Switchgrass And Miscanthus RhizosphereMKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPKN
Ga0207692_1094144413300025898Corn, Switchgrass And Miscanthus RhizosphereMKHAAIALTFATLLLAGTPVLAENPVEPSAPGSDKTPGVTPNDANVAPPIVIPAPEPRKNTGALNPD
Ga0207647_1077256613300025904Corn RhizosphereMKRAVTALVVATLALAGTPVKAENPVEPGAPGSDKTPGVTPNDAKANPPKETSKKTGATNPDTPDPTKNTPGAETKN
Ga0207695_1094322323300025913Corn RhizosphereQMKHAATALAVAMLVLAGTPVKAENPVEPGAPGADKTPGVTPNDAKASPPKEIPKKTGATNPDTPDPTKNTPGAETKN
Ga0207660_1012593023300025917Corn RhizosphereMKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTVGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPKN
Ga0207659_1080190413300025926Miscanthus RhizosphereMKHAAIALTFATVLLAGTPVLAENPVEPSAPGSDKTPGVTPNDANVAPPIVIPAPEPRKNTGALNPDTPDPTKNTHGAESKN
Ga0207709_1185156313300025935Miscanthus RhizosphereMKHAAIALTFATVLLAGTPVLAENPVEPSAPGSDKTPGVTPNDANVAPPIVIPAPEPRKNTGALNPDTPDPTKN
Ga0207670_1074503113300025936Switchgrass RhizosphereMKRAVTALVVATLALAGTPVRAENPVEPGAPGSDKTPGVTPKDTKASPPKETSKKTGASNPDTPDPTKNTPGAETKN
Ga0207711_1110612013300025941Switchgrass RhizosphereMKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPRRTDLRL
Ga0207651_1015159513300025960Switchgrass RhizosphereMKHAATALAVAMLVLAGTPVKAENPAEPGAPCSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPKN
Ga0207712_1123030813300025961Switchgrass RhizosphereMKRAVTALVVATLALAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETSKKTGATNPDTPDPTKNTPGAETKN
Ga0207668_1144317613300025972Switchgrass RhizosphereMRHAAIALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKEIPKKTGATNPDTPDPTKNTPGAETKN
Ga0207658_1118414323300025986Switchgrass RhizosphereAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGAEPKN
Ga0207658_1151813913300025986Switchgrass RhizosphereMKYTALVVAILALAGTPVLAENPVEPSSPGADKTPGVTPNDAKAAPKDTSKATGATNPDTPDPTKNT
Ga0207677_1186405813300026023Miscanthus RhizosphereMKHAAIALTFATVLLAGTPVLAENPVEPSAPGSDKTPGVTPNDANVAPPIVIPAPEPRKNTGALNPDT
Ga0207648_1049793523300026089Miscanthus RhizosphereMKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTPGVTPNDAKSAPTPPATTKNTGALNPDTPDPTKNTPGAESKN
Ga0207674_1102251823300026116Corn RhizosphereMKRAVTALVVATLALAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETPKETGATNPNTPDPTKNMPGAETKN
Ga0207428_1063596413300027907Populus RhizosphereMKNAAIGLTFATLLLAGSPALAENPVEPSAPGSDKTPGVTPNDAKAAPTPPATTKNTGASNPDTPDPTKNTPGAETKN
Ga0207428_1072308013300027907Populus RhizosphereMKHAAIALAVAMLVLAGTPVRAENPVEPGAPGSDKTPGVTPNDAKASPPKETPKETGATNPD
Ga0209382_1141610013300027909Populus RhizosphereAGAPALAENPVEPSAPGSDKTPGVTPNDASADKPVIIVPAPDATKNTGAMNPDTPDPTKNTPGAESKN
Ga0308206_115629723300030903SoilLQMKNTAIALTFATLLLAGTPVLAENPVEPGAPGSDKSPGVTPNDAKAAPTDATKTDDATKQTGASNPDTPDPTKNTPGAESKN
Ga0308190_115128013300030993SoilFATLLLAGTPVLAENPVEPGAPGSDKSPGVTPNDAKAGPTDATKTDDTTKQTGASNPDTPDPTKNTPGAESKN
Ga0308204_1035342513300031092SoilRRLLQMKNTAIALTFATLLLAGTPVLAENPVEPGAPGSDKSPGVTPNGAKAAPTDATKTNDATKQTGASNPDTPDPTKNTPGAESKN
Ga0310888_1014065713300031538SoilMKHAATALAVAMLVLAGTPVKAENPAEPGAPGSDKTLGVTPNDAKSAQTPPATTKNTGALNPDTPDPTKNTPGGGAEELIYD


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.