NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F070401

Metagenome / Metatranscriptome Family F070401

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F070401
Family Type Metagenome / Metatranscriptome
Number of Sequences 123
Average Sequence Length 61 residues
Representative Sequence HHHRLASDDRHSYGQLTRFLGADALAACETIQAAPPPPLLPATAPLAARIDADLSALWTG
Number of Associated Samples 92
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 99.19 %
% of genes from short scaffolds (< 2000 bps) 87.80 %
Associated GOLD sequencing projects 89
AlphaFold2 3D model prediction Yes
3D model pTM-score0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (72.358 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(34.959 % of family members)
Environment Ontology (ENVO) Unclassified
(42.276 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(46.341 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 44.32%    β-sheet: 0.00%    Coil/Unstructured: 55.68%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.32
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF00496SBP_bac_5 15.45
PF03704BTAD 10.57
PF00486Trans_reg_C 9.76
PF00005ABC_tran 4.88
PF00583Acetyltransf_1 4.07
PF00027cNMP_binding 2.44
PF13673Acetyltransf_10 2.44
PF16561AMPK1_CBM 2.44
PF03551PadR 1.63
PF03992ABM 1.63
PF13796Sensor 0.81
PF03009GDPD 0.81
PF01047MarR 0.81
PF13977TetR_C_6 0.81
PF13936HTH_38 0.81
PF01022HTH_5 0.81
PF13361UvrD_C 0.81
PF13401AAA_22 0.81
PF12770CHAT 0.81
PF13545HTH_Crp_2 0.81
PF13489Methyltransf_23 0.81
PF13191AAA_16 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG3629DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domainTranscription [K] 10.57
COG3947Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domainsTranscription [K] 10.57
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 1.63
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 1.63
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 1.63
COG0584Glycerophosphoryl diester phosphodiesteraseLipid transport and metabolism [I] 0.81


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms72.36 %
UnclassifiedrootN/A27.64 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005172|Ga0066683_10706356All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia597Open in IMG/M
3300005181|Ga0066678_10629728All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria714Open in IMG/M
3300005332|Ga0066388_107572581All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia544Open in IMG/M
3300005332|Ga0066388_108729659All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia503Open in IMG/M
3300005363|Ga0008090_12579838All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia549Open in IMG/M
3300005435|Ga0070714_101612714All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300005437|Ga0070710_11442240Not Available516Open in IMG/M
3300005439|Ga0070711_100949278All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia736Open in IMG/M
3300005455|Ga0070663_102137210All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria505Open in IMG/M
3300005540|Ga0066697_10661320All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia574Open in IMG/M
3300006175|Ga0070712_100378632Not Available1164Open in IMG/M
3300006755|Ga0079222_11267013All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria668Open in IMG/M
3300006796|Ga0066665_10389765All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1147Open in IMG/M
3300006804|Ga0079221_11787391Not Available503Open in IMG/M
3300009101|Ga0105247_10656629All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia784Open in IMG/M
3300010043|Ga0126380_10360865All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1062Open in IMG/M
3300010043|Ga0126380_11899896Not Available541Open in IMG/M
3300010046|Ga0126384_12488125Not Available502Open in IMG/M
3300010047|Ga0126382_10725668All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae837Open in IMG/M
3300010358|Ga0126370_10578134All Organisms → cellular organisms → Bacteria965Open in IMG/M
3300010360|Ga0126372_10964706All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii861Open in IMG/M
3300010360|Ga0126372_11657622All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia680Open in IMG/M
3300010361|Ga0126378_11150795All Organisms → cellular organisms → Bacteria875Open in IMG/M
3300010361|Ga0126378_11972819All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii665Open in IMG/M
3300010361|Ga0126378_12936426All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia544Open in IMG/M
3300010366|Ga0126379_10947017All Organisms → cellular organisms → Bacteria965Open in IMG/M
3300010366|Ga0126379_11157068All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia880Open in IMG/M
3300010366|Ga0126379_11253726Not Available848Open in IMG/M
3300010376|Ga0126381_100222844Not Available2537Open in IMG/M
3300010398|Ga0126383_10659750All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae1122Open in IMG/M
3300010398|Ga0126383_11116462Not Available878Open in IMG/M
3300010398|Ga0126383_13182861Not Available536Open in IMG/M
3300010398|Ga0126383_13195098Not Available535Open in IMG/M
3300010398|Ga0126383_13271260Not Available529Open in IMG/M
3300010937|Ga0137776_1832936All Organisms → cellular organisms → Bacteria909Open in IMG/M
3300012189|Ga0137388_10068509All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2949Open in IMG/M
3300012200|Ga0137382_11223042Not Available533Open in IMG/M
3300012354|Ga0137366_10017508All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia5608Open in IMG/M
3300012971|Ga0126369_10080020All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes2896Open in IMG/M
3300012971|Ga0126369_12926414Not Available559Open in IMG/M
3300016270|Ga0182036_10288748All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1243Open in IMG/M
3300016294|Ga0182041_10100857All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii2120Open in IMG/M
3300016294|Ga0182041_10492191All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1062Open in IMG/M
3300016404|Ga0182037_10108700All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2012Open in IMG/M
3300016404|Ga0182037_10272958All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1347Open in IMG/M
3300017966|Ga0187776_10079806All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces1913Open in IMG/M
3300018060|Ga0187765_11327535All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia510Open in IMG/M
3300018089|Ga0187774_11426357Not Available508Open in IMG/M
3300021088|Ga0210404_10550980All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria654Open in IMG/M
3300021560|Ga0126371_10916494All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1020Open in IMG/M
3300021560|Ga0126371_11688928All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria757Open in IMG/M
3300021560|Ga0126371_11699683All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii755Open in IMG/M
3300021560|Ga0126371_12335337All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii646Open in IMG/M
3300021560|Ga0126371_13150052Not Available558Open in IMG/M
3300025898|Ga0207692_10178513Not Available1235Open in IMG/M
3300025915|Ga0207693_11211171Not Available569Open in IMG/M
3300025915|Ga0207693_11476664Not Available502Open in IMG/M
3300025935|Ga0207709_11789739All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia511Open in IMG/M
3300026035|Ga0207703_11834601All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia582Open in IMG/M
3300028781|Ga0302223_10158848All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia746Open in IMG/M
3300028789|Ga0302232_10052760All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2152Open in IMG/M
3300028877|Ga0302235_10011275All Organisms → cellular organisms → Bacteria5387Open in IMG/M
3300028879|Ga0302229_10021882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3522Open in IMG/M
3300028906|Ga0308309_10933131All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria753Open in IMG/M
3300029915|Ga0311358_10956852Not Available594Open in IMG/M
3300030007|Ga0311338_10329789All Organisms → cellular organisms → Bacteria1670Open in IMG/M
3300030013|Ga0302178_10031360All Organisms → cellular organisms → Bacteria3067Open in IMG/M
3300030056|Ga0302181_10012302All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium5141Open in IMG/M
3300030580|Ga0311355_10098473All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3259Open in IMG/M
3300030618|Ga0311354_10453104All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1280Open in IMG/M
3300031234|Ga0302325_12882784Not Available560Open in IMG/M
3300031549|Ga0318571_10079076All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1040Open in IMG/M
3300031640|Ga0318555_10167666Not Available1179Open in IMG/M
3300031640|Ga0318555_10613358Not Available589Open in IMG/M
3300031681|Ga0318572_10160904Not Available1300Open in IMG/M
3300031682|Ga0318560_10167046All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1168Open in IMG/M
3300031682|Ga0318560_10690643Not Available552Open in IMG/M
3300031736|Ga0318501_10293542All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii866Open in IMG/M
3300031747|Ga0318502_10017496Not Available3407Open in IMG/M
3300031747|Ga0318502_10128321Not Available1430Open in IMG/M
3300031747|Ga0318502_10588481All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300031765|Ga0318554_10181742Not Available1197Open in IMG/M
3300031770|Ga0318521_10430039All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria789Open in IMG/M
3300031771|Ga0318546_11158604All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia543Open in IMG/M
3300031777|Ga0318543_10476448All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia559Open in IMG/M
3300031778|Ga0318498_10373369All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii635Open in IMG/M
3300031778|Ga0318498_10394607All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii615Open in IMG/M
3300031778|Ga0318498_10500733Not Available535Open in IMG/M
3300031781|Ga0318547_10280279All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1009Open in IMG/M
3300031781|Ga0318547_10959213Not Available534Open in IMG/M
3300031794|Ga0318503_10207969All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii634Open in IMG/M
3300031797|Ga0318550_10254290All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria852Open in IMG/M
3300031798|Ga0318523_10066391All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1727Open in IMG/M
3300031821|Ga0318567_10255945All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces europaeiscabiei983Open in IMG/M
3300031821|Ga0318567_10593004All Organisms → cellular organisms → Bacteria → Terrabacteria group629Open in IMG/M
3300031831|Ga0318564_10291988Not Available720Open in IMG/M
3300031845|Ga0318511_10264002All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii774Open in IMG/M
3300031859|Ga0318527_10424521All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia567Open in IMG/M
3300031893|Ga0318536_10451794All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria647Open in IMG/M
3300031894|Ga0318522_10345131All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia564Open in IMG/M
3300031910|Ga0306923_11438706All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii724Open in IMG/M
3300031941|Ga0310912_10186650All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1581Open in IMG/M
3300031941|Ga0310912_11211417Not Available574Open in IMG/M
3300031947|Ga0310909_10755862Not Available805Open in IMG/M
3300031954|Ga0306926_10266938All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2120Open in IMG/M
3300031954|Ga0306926_12010846All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria649Open in IMG/M
3300032009|Ga0318563_10126859All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1361Open in IMG/M
3300032010|Ga0318569_10078159All Organisms → cellular organisms → Bacteria1471Open in IMG/M
3300032035|Ga0310911_10178309All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1204Open in IMG/M
3300032041|Ga0318549_10150446Not Available1036Open in IMG/M
3300032054|Ga0318570_10133543All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1103Open in IMG/M
3300032054|Ga0318570_10226705All Organisms → cellular organisms → Bacteria846Open in IMG/M
3300032059|Ga0318533_10874905All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria659Open in IMG/M
3300032065|Ga0318513_10627377All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia526Open in IMG/M
3300032066|Ga0318514_10058803All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1876Open in IMG/M
3300032068|Ga0318553_10562446Not Available597Open in IMG/M
3300032076|Ga0306924_11051282All Organisms → cellular organisms → Bacteria → Terrabacteria group891Open in IMG/M
3300032076|Ga0306924_11835696All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia631Open in IMG/M
3300032174|Ga0307470_10145625All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1440Open in IMG/M
3300032783|Ga0335079_10337694All Organisms → cellular organisms → Bacteria → Terrabacteria group1636Open in IMG/M
3300032828|Ga0335080_12142559All Organisms → cellular organisms → Bacteria → Terrabacteria group538Open in IMG/M
3300033158|Ga0335077_10187682All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2336Open in IMG/M
3300034818|Ga0373950_0045134All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia853Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil34.96%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil21.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil8.13%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa8.13%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.25%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.44%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.44%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.44%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.63%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.63%
SedimentEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment0.81%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.81%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.81%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.81%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil0.81%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005363Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010937Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018089Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MGEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028781Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3EnvironmentalOpen in IMG/M
3300028789Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3EnvironmentalOpen in IMG/M
3300028877Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3EnvironmentalOpen in IMG/M
3300028879Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029915III_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030013Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3EnvironmentalOpen in IMG/M
3300030056Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3EnvironmentalOpen in IMG/M
3300030580II_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030618II_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031765Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031777Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24EnvironmentalOpen in IMG/M
3300031778Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031794Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23EnvironmentalOpen in IMG/M
3300031797Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23EnvironmentalOpen in IMG/M
3300031798Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19EnvironmentalOpen in IMG/M
3300031821Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20EnvironmentalOpen in IMG/M
3300031831Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031859Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031894Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032009Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19EnvironmentalOpen in IMG/M
3300032010Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032041Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22EnvironmentalOpen in IMG/M
3300032054Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032065Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300034818Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0066683_1070635613300005172SoilHHRLASDDRHSYGQLSRFLDDRALAECESVQAAPPGPLLPHAGELAARIDADLDALWTG*
Ga0066678_1062972823300005181SoilPMRLHHHRLASDDRHGYALLTRFLGAGALAACETIEAAPPVPLLPATGQIRARIDADLSSLWTG*
Ga0066388_10757258123300005332Tropical Forest SoilLASDDRHSYGQLTRFLDADALAACETIQAAPAPPLLPATAPLAARIDADLGALWTG*
Ga0066388_10872965923300005332Tropical Forest SoilPMRLHHHRLGADDRHSYGQLTRFLDRAALAVCESIQATPPQPLLPHIGQLAARIDADLDALWAAPG*
Ga0008090_1257983823300005363Tropical Rainforest SoilMRLHHHRLASDDRHSYGQLSRFLDSNALAACESVQATPPEPVLPRTGQLAARIDADLDALWTG*
Ga0070714_10161271413300005435Agricultural SoilASDDRHGYGQLTRFLDRAALAACDSVQATPPQPVLPRTGQLAARIDADLNALWA*
Ga0070710_1144224013300005437Corn, Switchgrass And Miscanthus RhizosphereDDRHGYGQLTRFLGAGALAACESIEAAPPVPLLPATGQIRARIDADLSSLWSG*
Ga0070711_10094927823300005439Corn, Switchgrass And Miscanthus RhizosphereRLHHHRLASDDRHSYGQLTRFLGADALAACETIQAAPPPPLLPATAPLAARIDADLGALWAG*
Ga0070663_10213721023300005455Corn RhizosphereSLYLYAPMRLHHHRLASDDRHGYGQLTRFLGKGALAACETIEAAPPVPLLPATGQIRARIDADLSSLWTG*
Ga0066697_1066132023300005540SoilHHRLASDDRHSYGQLSRFLDDRALAECESVQAAPPGPLLPRTGELAARIDADLDALWSG*
Ga0070712_10037863223300006175Corn, Switchgrass And Miscanthus RhizosphereDDRHGYGQLTRFLGAGALAACETIEAAPPVPLLPATGQIRARIDADLSSLWTG*
Ga0079222_1126701313300006755Agricultural SoilPMRLHHHRLASDDRHGYGQLTRFLGKGALAACETIEAAPPVPLLPATGQIRARIDADLSSLWTG*
Ga0066665_1038976513300006796SoilDNLFLYAPMRLHHHRLASDDRHGYGQLTRFLGRDALAACESIEAAPPRPLLPATGQLRARIDADLSALWAG*
Ga0079221_1178739113300006804Agricultural SoilDDRHSYGQLTRFLDRTALAACESIQATPPQPVLPRIGQLAARIDADLDALWTVPR*
Ga0105247_1065662923300009101Switchgrass RhizosphereASDDRHGYAQLTRFLDGEALAACESVDAEPPAPLLPRTGRLAARIDADLSALWTG*
Ga0126380_1036086533300010043Tropical Forest SoilDDRHSYGQLSRFLDGRALAECESVQAAPPGPLLPRTGELAARIDADLDALWTG*
Ga0126380_1189989613300010043Tropical Forest SoilAGDDRHGYGQLTRFLGKGALAACETIEAAPPVPLLPATGRIRARIDADLSSLWTG*
Ga0126384_1248812513300010046Tropical Forest SoilPMRLHHHRLGGDDRHSYGQLTRFLDRTALAVCESIHATPPQPLLPHIGQLAARIDADLDALWAAPR*
Ga0126382_1072566813300010047Tropical Forest SoilLYAPMCLHHHRLAGDDRHSYGQLSRFLDGRALAECESVQAAPPGPLLPHTGELAARIDADLDALWTG*
Ga0126370_1057813413300010358Tropical Forest SoilHGYGQLTRFLDGEALAACESVQAEPPAPLLPRTGRLAARIDADLSALWTG*
Ga0126372_1096470623300010360Tropical Forest SoilGRDDRHSYGQLTRFLNPGALAACETIQAAPPPPLLPATAPLAARIDADLGALWTG*
Ga0126372_1165762223300010360Tropical Forest SoilMRLHHHRLAGDDRHSYGQLTRFLGADALGACETIQAAPPPPLLPATAPLAA
Ga0126378_1115079523300010361Tropical Forest SoilHRLASDDRHGYGQLTRFLGPGALAACETIEAAPPVPLLPATGQIRARIDADLSSLWTG*
Ga0126378_1197281913300010361Tropical Forest SoilLYAPMRLHHHRLASDDRHSYGQLTRFLDADALAACETIQAAPPPPLLPATAPLAARIDADLGALWTG*
Ga0126378_1293642623300010361Tropical Forest SoilYLYAPMRLHHHRLASDDRHSYGQLTRFLDAGALAACETIQAAPPPPLLPATAPLAARIDADLGALWTG*
Ga0126379_1094701723300010366Tropical Forest SoilLHHHRLASDDRHGYGQLTRFLGKGALAACETIEAAPPLPLLPATGRIRARIDADLSSLWTG*
Ga0126379_1115706823300010366Tropical Forest SoilASDDRHGYGQLSRFLDGTALAACESVQAEPPAPLLPRTGRLAARIDAGLDALWTG*
Ga0126379_1125372613300010366Tropical Forest SoilRHGYGQLTRFLDGEALAACESVQAEPPAPLLPRTGQLAARIDADLSALWTG*
Ga0126381_10022284413300010376Tropical Forest SoilSDDRHSYGQLTRFLGADALAACETIQAAPPPPLLPATAPLAARIDADLGALWTG*
Ga0126383_1065975033300010398Tropical Forest SoilGDDRHSYGQLSRFLDRRALAECESVQAAPPGPLLPRTGELAARIDADLDALWTG*
Ga0126383_1111646233300010398Tropical Forest SoilRLHHHRLASDDRHGYGQLSRFLDGEALAACESVQAEPPAPLLPRTGRLAARIDADLSALWSG*
Ga0126383_1318286113300010398Tropical Forest SoilPMRLHHHRLASDDRHGYGQLTRFLGKGALAACDTVEAAPPVPLLPATGQIRARIDADLSSLWTG*
Ga0126383_1319509813300010398Tropical Forest SoilMRLHHHRLGADDRHSYGQLTRFLDRAALAVCEPIQATPPQPLLPHIGQLAARIDADLDALWAAPR*
Ga0126383_1327126023300010398Tropical Forest SoilAPLRLHHHRLASDDRHGYGQLSRFLDGEALAACESVQAEPPAPLLPRTGRLAARIDADLSALWTG*
Ga0137776_183293623300010937SedimentRLHHHRLASDDRHGYGQLTRFLGAGALAACETIEAAPPVPLLPATGQIRARIDADLSSLWTG*
Ga0137388_1006850913300012189Vadose Zone SoilAPLRLHHHRLASDDRHSFGQLTRFLDENALAACETIQAAPPPPLLPATGPLAARIDADLGALWAG*
Ga0137382_1122304223300012200Vadose Zone SoilASDDRHSYGQLTRFLDPGALAVCETIQATPPPPLLPTTAPIAARIEADLGALWTG*
Ga0137366_1001750863300012354Vadose Zone SoilDDRHGYGQLTRFLGRDALAACETIEAAPPRPLLPATGQLRARIDADLSSLWVG*
Ga0126369_1008002013300012971Tropical Forest SoilVPPGARATGCDDRHGYGQLSRFLDPTALAACESVQAEPPAPLLPRTGRLAARIDADLSALWTG*
Ga0126369_1292641423300012971Tropical Forest SoilYAPMRLHHHRLASDDRHGYGQLTRFLGKGALAACETVEAAPPVPLLPATGQIRARIDADLSSLWTG*
Ga0182036_1028874833300016270SoilASDDRHGYGQLTRFLDGEALAACESVQAEPPAPLLPRTGQLAARIDADLDALWTG
Ga0182041_1010085713300016294SoilLYLYAPMRLHHHRLASDDRHSYGQLTRFLGADALAACETIQAAPPPPLLPATAPLAARIDADLSALWTG
Ga0182041_1049219113300016294SoilHHRLASDDRHGYGQLTRFLGKGALAACETIEAAPPVPLLPATGQIRARIDADLSSLWTG
Ga0182037_1010870033300016404SoilFLYAPMRLHHHRLASDDRHSYGQLSRFLDSKALAACESVQATPPEPVLPRTGQLAARVDADLGALWTG
Ga0182037_1027295813300016404SoilLHHHRLASDDRHSYGQLTRFLGADALAACETIQAAPPPPLLPATAPLAARIDADLSALWT
Ga0187776_1007980623300017966Tropical PeatlandRLARDDRHSYGQLSRFLDDRALAACDAVQAVPPQPLLPRTGQLGARVAADLDALWTG
Ga0187765_1132753523300018060Tropical PeatlandLRLHHHRLASDDRHGYGQLTRFLDGEALAACESVQAEPPAPLLPRTGQLAARIDADLSALWTG
Ga0187774_1142635723300018089Tropical PeatlandSDDRHGYGQLTRFLDGEALAVCESVQAEPPAPLLPRTGRLAARIDADLSALWTG
Ga0210404_1055098013300021088SoilADDRHGYGQLTRFLGAGALAACETIEAAPPVPVLPATGQIRARIDADLSSLWSG
Ga0126371_1091649433300021560Tropical Forest SoilARDQLFLYAPMRLHHHRLAGDDRHGYGQLSRFLDGRALAACETVQAAPPGPVLPSTGQLAARIDADLDALWSG
Ga0126371_1168892823300021560Tropical Forest SoilYAPMRLHHHRLASDDRHGYGQLTRFLGKAALAACEAIEAAPPVPQLPATGQIRARIDADLSSLWTG
Ga0126371_1169968323300021560Tropical Forest SoilRHSYGQLTRFLGADALGACETIQAAPPPPLLPATAPLAARIDADLGALWTG
Ga0126371_1233533713300021560Tropical Forest SoilLYLYAPMRLHHHRLASDDRHSYGQLTRFLDADALAACETIQAAPPPPLLPAIAPLAARIDADLGALWTG
Ga0126371_1315005223300021560Tropical Forest SoilRHGYGQLTRFLDGEALAACESVQAEPPAPLLPRTGQLAARIDADLSALWTG
Ga0207692_1017851323300025898Corn, Switchgrass And Miscanthus RhizosphereDHLYLYAPMRLHHHRLAADDRHGYGQLTRFLGAGALAACESIEAAPPVPLLPATGQIRARIDADLSSLWSG
Ga0207693_1121117123300025915Corn, Switchgrass And Miscanthus RhizospherePMRLHHHRLAADDRHGYGQLTRFLGAGALAACETIEAAPPVPLLPATGQIRARIDADLSSLWTG
Ga0207693_1147666413300025915Corn, Switchgrass And Miscanthus RhizosphereRHGYGQLTRFLDGKALAACESVQAEPPAPLLPRTGQLAARIDADLSALWTG
Ga0207709_1178973913300025935Miscanthus RhizosphereDRHGYGQLSRFLDGEALAACESVDAEPPAPLLPRTGRLAARIDADLSALWTG
Ga0207703_1183460123300026035Switchgrass RhizosphereSDDRHGYGQLSRFLDGEALAACESVDAEPPAPLLPRTGRLAARIDADLSALWTG
Ga0302223_1015884833300028781PalsaRLASDDRHSYGQLSRFLDDQALAACDSVQAEPPAPLLPPTGQLAARIDADLDALWTG
Ga0302232_1005276053300028789PalsaLHHHRLASDDRHSYGQLSRFLDDQALAACDSVQAEPPAPLLPPTGQLAARIDADLDALWT
Ga0302235_1001127513300028877PalsaSDDRHSYGQLSRFLDDQALAACDSVQAEPPAPLLPPTGQLAARIDADLDALWTG
Ga0302229_1002188263300028879PalsaPMRLHHHRLASDDRHSYGQLSRFLDAQALAACDSVQAEPPAPLLPRTGQLAARIDADLDALWTG
Ga0308309_1093313113300028906SoilHHHRLASDDRHGYGQLTRFLSKAALAACETIEAAPPVPLLPAAGQIRARIDADLSSLWTG
Ga0311358_1095685213300029915BogASDDRHSYGQLSRFLDDQALAACDSVQAEPPAPLLPRTGQLVARIDADLDALWTG
Ga0311338_1032978943300030007PalsaLHHHRLASDDRHSYGQLSRFLDDQALAACDSVQAEPPAPLLPRTGQLAARIDADLDALWT
Ga0302178_1003136053300030013PalsaDRHSYGQLSRFLDDQALAACDSVQAEPPAPLLPRTGQLAARIDADLDALWTG
Ga0302181_1001230213300030056PalsaDQLFLYAPMRLHHHRLASDDRHSYGQLSRFLDAQALAACDSVQAEPPAPLLPRTGQLAARIDADLDALWTG
Ga0311355_1009847363300030580PalsaDRHSYGQLSRFLDDQALAACDSVQAEPPAPLLPPTGQLAARIDADLDALWTG
Ga0311354_1045310433300030618PalsaHHHRLASDDRHSYGQLSRFLDDQALAACDSVQAEPPAPLLPRTGQLAARIDADLDALWTG
Ga0302325_1288278413300031234PalsaRLHHHRLASDDRHSYGQLSRFLDDQALAACDSVQAEPPAPLLPRTGQLAARIDADLDALWTG
Ga0318571_1007907623300031549SoilMRLHHHRLASDDRHSYGQLTRFLGADALAACETIQAAPPPPLLPATAPLAARIDADLGALWTG
Ga0318555_1016766623300031640SoilLYLYAPMRLHHHRLASDDRHGYGQLTRFLGKGALAACETIEAAPPVPLLPATGQIRARIDADLSSLWTG
Ga0318555_1061335823300031640SoilLYAPMRLHHHRLGSDDRHGYGQLTRFLGPGALAACETIEAAPPRPLLPATGQLRARVDADLSALWTG
Ga0318572_1016090423300031681SoilSDDRHGYGQLTRFLGPGALAACETIEAAPPRPLLPATSQLRARVDADLSALWSG
Ga0318560_1016704623300031682SoilQLYLYAPMRLHHHRLASDDRHSYGQLTRFLGADALAACETIQAAPPPPLLPATAPLAARIDADLSALWTG
Ga0318560_1069064323300031682SoilPMRLHHHRLASDDRHGYGQLTRFLGPGALAACETIEAAPPVPLLPATGQIRARIDADLSSLWTG
Ga0318501_1029354223300031736SoilLGRDDRHSYGQLTRFLDADALAACETIQAAPPPPLLPATAPIAARIEADLGALWTG
Ga0318502_1001749623300031747SoilHRLASDDRHSYGQLTRFLGADALAACETIQAAPPPPLLPATAPLAARIDADLGALWTG
Ga0318502_1012832113300031747SoilHHHRLGCDDRHGYGQLTRFLGPGALAACETIEAAPPRPLLPAAGQLRARVDADLSALWTG
Ga0318502_1058848113300031747SoilRDQLFLYAPMRLHHHRLGGDDRHSYGQLTRFLDRTALAACESIQATPPQPALPRIGQLAARIDADLNALWTVPR
Ga0318554_1018174213300031765SoilTRARDHLYLYAPMRLHHHRLGSDDRHGYGQLTRFLGPGALAACETIEAAPPRPLLPATGQLRARVDADLSALWTG
Ga0318521_1043003913300031770SoilLYLYAPMRLHHHRLASDDRHGYAQLTRFLGKGALAACETIEAAPPVPLLPATGQIRARIDADLSSLWAG
Ga0318546_1115860413300031771SoilDRHSYGQLTRFLGADALAACETIQAAPPPPLLPATAPLAARIDADLGALWTG
Ga0318543_1047644813300031777SoilHHHRLASDDRHSYGQLTRFLGADALAACETIQAAPPPPLLPATAPLAARIDADLSALWTG
Ga0318498_1037336923300031778SoilPMRLHHHRLASDDRHSYGQLTRFLGADALAACETIQAAPPPPLLPATAPLAARIDADLSALWTG
Ga0318498_1039460723300031778SoilAPMRLHHHRLASDDRHSYGQLTRFLGADALAACETIQAAPPPPLLPATAPLAARIDADLGALWTG
Ga0318498_1050073323300031778SoilHHRLGGDDRHSYGQLTRFLDRTALAACESIQATPPQPVLPRIGQLAARIDADLNALWTVP
Ga0318547_1028027923300031781SoilASDDRHSYGQLTRFLGADALAACETIQAAPPPPLLPATAPLAARIDADLSALWTG
Ga0318547_1095921313300031781SoilLYLYAPMRLHHHRLASDDRHSYGQLTRFLDGDALAACETIQAAPPPPLLPAIAPLAARIDADLGALWTG
Ga0318503_1020796913300031794SoilYLYAPMRLHHHRLASDDRHSYGQLTRFLGADALAACETIQAAPPPPLLPATAPLAARIDADLGALWTG
Ga0318550_1025429023300031797SoilRDHLYLYAPMRLHHHRLGCDDRHGYGQLTRFLGPGALAACETIEAAPPRPLLPAAGQLRARVDADLSALWTG
Ga0318523_1006639123300031798SoilYLYAPMRLHHHRLASDDRHSYGQLTRFLGADALAACEIIQAAPPPPLLPATAPLAARIDADLSALWTG
Ga0318567_1025594523300031821SoilARDDRHSYGQLSRFLDSKALAACESVQATPPEPVLPRTGQLAARVDADLGALWTG
Ga0318567_1059300413300031821SoilDRHGYGQLTRFLDGEALAACESVQAEPPAPLLPRTGQLAARIDADLSALWTG
Ga0318564_1029198823300031831SoilYLYAPMRLHHHRLASDDRHSYGQLTRFLDGDALAACETIQAAPPPPLLPAIAPLAARIDADLGALWTG
Ga0318511_1026400223300031845SoilLYLYAPMRLHHHRLASDDRHSYGQLTRFLGADALAACETIQAAPPPPLLPATAPLAARIDADLGALWTG
Ga0318527_1042452123300031859SoilHHRRLASDDRHGYGQLSRFLDDSALAACESVQAAPPGPLLPRTGQLAARIDADLDALWTG
Ga0318536_1045179423300031893SoilLYAPMRLHHHRLASDDRHGYGQLTRFLGKGALAACETIEAAPPVPLLPATGQIRARIDADLSSLWTG
Ga0318522_1034513123300031894SoilHRLASDDRHSYGQLTRFLGADALAACETIQAAPPPPLLPATAPLAARIDADLSALWTG
Ga0306923_1143870623300031910SoilQLYLYAPMRLHHHRLASDDRHSYGQLTRFLGADALAACETIQAAPPPPLLPATAPLAARIDADLGALWTG
Ga0310912_1018665013300031941SoilDQLYLYAPMRLHHHRLASDDRHSYGQLTRFLGADALAACETIQAAPPPPLLPATAPLAARIDADLSALWTG
Ga0310912_1121141713300031941SoilRLYHHRLASDDRHGYGQLTRFLDGEALAACESVQAEPPAPLLPRTGQLAARIDADLSALWTG
Ga0310909_1075586213300031947SoilRHGYAQPSRFLTTGALAACETVQAAPPEPLLPRAGQLAARIDADLDALWTG
Ga0306926_1026693813300031954SoilHHRLGSDDRHGYGQLTRFLGPGALAACETIEAAPPRPLLPATGQLRARVDADLSALWSG
Ga0306926_1201084613300031954SoilDSLYLYAPMRLHHHRLASDDRHGYGQLTRFLGKGALAACETIEAAPPVPLLPATGQIRARIDADLSSLWTG
Ga0318563_1012685913300032009SoilLYAPMRLHHHRLASDDRHSYGQLTRFLGADALAACETIQAAPPPPLLPATAPLAARIDADLSALWTG
Ga0318569_1007815913300032010SoilRLHHHRLGGDDRHGYGQLTRFLGPGALAACETIEAAPPRPLLPAAGQLRARVDADLSALWTG
Ga0310911_1017830933300032035SoilRGMAILARLHHRRLASDDRHGYGQLSRFLDDSALAACESVQAAPPGPLLPRTGQLAARIDADLDALWTG
Ga0318549_1015044613300032041SoilHHHRLASDDRHSYGQLTRFLDGDALAACETIQAAPPPPLLPAIAPLAARIDADLGALWTG
Ga0318570_1013354323300032054SoilMRLHHHRLASDDRHSYGQLTRFLGADALAACETIQAAPPPPLLPATAPLAARIDADLSALWTG
Ga0318570_1022670523300032054SoilPMRLHHHRLASDDRHGYGQLTRFLGKGALAACETIEAAPPVPLLPATGQIRARIDADLSSLWTG
Ga0318533_1087490513300032059SoilDDRHGYGQLTRFLGPGALAACETIEAAPPRPLLPATGQLRARVDADLSALWSG
Ga0318513_1062737713300032065SoilYGQLTRFLDRAALAACESIEATPPRPVLPTVSALAARIDADLDALWAG
Ga0318514_1005880313300032066SoilLHHHRLGRDDRHSYGQLTRFLGADALATCETIQAAPPPPLLPATAPLAARIDADLGALWT
Ga0318553_1056244613300032068SoilHRLASDDRHSYGQLTRFLDGDALAACETIQAAPPPPLLPAIAPLAARIDADLGALWTG
Ga0306924_1105128213300032076SoilLRLHHHRLGGDDRHSYGQLTRFLDRTALAACESIQATPPQPVLPRIGQLAARIDADLNALWSVPR
Ga0306924_1183569623300032076SoilRLHHRRLASDDRHGYGQLSRFLDDSALAACESVQAAPPGPLLPRTGQLAARIDADLDALWTG
Ga0307470_1014562513300032174Hardwood Forest SoilYAPLRLHHHRLASDDRHGYGQLSRFLDGEALAACESVDAEPPAPLLPRTGRLAARIDADLSALWTG
Ga0335079_1033769413300032783SoilLRLHHHRLASDDRHGYGQLTRFLDGVALAACESVQAEPPAPLLPRTGRLAARVDADLSALWTG
Ga0335080_1214255913300032828SoilRLHHHRLASDDRHGYGQLSRFLDGKALAACESVDAEPPAPLLPRTGRLAARIDADLSALWTG
Ga0335077_1018768213300033158SoilSDDRHGYGQLSRFLDGSALAACESVQAEPPVPLLPRTGRLAARIDADLGALWSG
Ga0373950_0045134_677_8533300034818Rhizosphere SoilHRLASDDRHGYGQLSRFLDGEALAACESVDAEPPAPLLPRTGRLAARIDADLSALWTG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.