Metagenome / Metatranscriptome Family F070398

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070398
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	72 residues
Representative Sequence	MRKFLLILACVSMAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQRSREK
Number of Associated Samples	98
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	19.51 %
% of genes near scaffold ends (potentially truncated)	38.21 %
% of genes from short scaffolds (< 2000 bps)	78.05 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.537 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (13.008 % of family members)
Environment Ontology (ENVO)	Unclassified (28.455 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.285 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 66.99% β-sheet: 0.00% Coil/Unstructured: 33.01%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF13539	Peptidase_M15_4	18.70
PF04392	ABC_sub_bind	6.50
PF13193	AMP-binding_C	4.07
PF13561	adh_short_C2	2.44
PF01075	Glyco_transf_9	2.44
PF13531	SBP_bac_11	1.63
PF04239	DUF421	0.81
PF04226	Transgly_assoc	0.81
PF07331	TctB	0.81
PF13620	CarboxypepD_reg	0.81
PF14023	DUF4239	0.81
PF03734	YkuD	0.81
PF01053	Cys_Met_Meta_PP	0.81
PF00440	TetR_N	0.81
PF02798	GST_N	0.81
PF03061	4HBT	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	6.50
COG0859	ADP-heptose:LPS heptosyltransferase	Cell wall/membrane/envelope biogenesis [M]	2.44
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.81
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.81
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.81
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.81
COG2323	Uncharacterized membrane protein YcaP, DUF421 family	Function unknown [S]	0.81
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.81
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.81
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.81
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.81
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.81
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.81
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.81
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.81
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.81
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.54 %
All Organisms	root	All Organisms	41.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.54 %
cellular organisms	root	All Organisms → cellular organisms	41.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.54 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	30.08 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.54 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23.58 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.63 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.54 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17.89 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	1.63 %
Armatimonadia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.54 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.25 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.63 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.63 %
Capsulimonadales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales	0.81 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	0.81 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.54 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.63 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.63 %
Capsulimonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae	0.81 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	0.81 %
unclassified Bradyrhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae	0.81 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.54 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.63 %
unclassified Pseudorhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes	0.81 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.81 %
Mesorhizobium sediminum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium sediminum	0.81 %
Capsulimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas	0.81 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.81 %
Mesorhizobium prunaredense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium prunaredense	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.54 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.63 %
Pseudorhodoplanes sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	0.81 %
Capsulimonas corticalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis	0.81 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.81 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.81 %
Mesorhizobium sediminum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium sediminum	0.81 %
Mesorhizobium prunaredense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium prunaredense	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000156\|NODE_c0730499	All Organisms → cellular organisms → Bacteria	7877	Open in IMG/M
3300000156\|NODE_c0740273	All Organisms → cellular organisms → Bacteria	13050	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101595412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2968	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1061375	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10057614	Not Available	999	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1015249	All Organisms → cellular organisms → Bacteria	1461	Open in IMG/M
3300004633\|Ga0066395_10526263	Not Available	685	Open in IMG/M
3300004633\|Ga0066395_11040066	Not Available	501	Open in IMG/M
3300005148\|Ga0066819_1026190	Not Available	513	Open in IMG/M
3300005294\|Ga0065705_10122788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2861	Open in IMG/M
3300005331\|Ga0070670_100095417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2558	Open in IMG/M
3300005332\|Ga0066388_100056190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4111	Open in IMG/M
3300005332\|Ga0066388_100373342	All Organisms → cellular organisms → Bacteria	2073	Open in IMG/M
3300005332\|Ga0066388_103749846	Not Available	775	Open in IMG/M
3300005332\|Ga0066388_103752677	All Organisms → cellular organisms → Bacteria → Proteobacteria	775	Open in IMG/M
3300005332\|Ga0066388_104452958	Not Available	714	Open in IMG/M
3300005340\|Ga0070689_100235076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1508	Open in IMG/M
3300005343\|Ga0070687_100253969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1094	Open in IMG/M
3300005355\|Ga0070671_100476198	Not Available	1072	Open in IMG/M
3300005435\|Ga0070714_100585585	Not Available	1070	Open in IMG/M
3300005439\|Ga0070711_100082979	All Organisms → cellular organisms → Bacteria	2288	Open in IMG/M
3300005440\|Ga0070705_100891375	Not Available	715	Open in IMG/M
3300005445\|Ga0070708_100297741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1519	Open in IMG/M
3300005456\|Ga0070678_100231207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1542	Open in IMG/M
3300005459\|Ga0068867_100350318	Not Available	1232	Open in IMG/M
3300005545\|Ga0070695_100921662	Not Available	707	Open in IMG/M
3300005547\|Ga0070693_100217538	Not Available	1250	Open in IMG/M
3300005615\|Ga0070702_100507863	Not Available	886	Open in IMG/M
3300005713\|Ga0066905_100418479	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300005764\|Ga0066903_100008635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9443	Open in IMG/M
3300005764\|Ga0066903_105480629	Not Available	669	Open in IMG/M
3300005764\|Ga0066903_106304162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	619	Open in IMG/M
3300005764\|Ga0066903_106493097	Not Available	609	Open in IMG/M
3300005842\|Ga0068858_100127619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2383	Open in IMG/M
3300005842\|Ga0068858_101216979	Not Available	740	Open in IMG/M
3300006047\|Ga0075024_100095921	Not Available	1295	Open in IMG/M
3300006048\|Ga0075363_100522705	Not Available	706	Open in IMG/M
3300006175\|Ga0070712_100482125	Not Available	1037	Open in IMG/M
3300006606\|Ga0074062_10907595	Not Available	576	Open in IMG/M
3300006854\|Ga0075425_100076489	All Organisms → cellular organisms → Bacteria → Proteobacteria	3779	Open in IMG/M
3300006954\|Ga0079219_10980904	Not Available	697	Open in IMG/M
3300009551\|Ga0105238_10716786	Not Available	1013	Open in IMG/M
3300009553\|Ga0105249_10418410	All Organisms → cellular organisms → Bacteria → Proteobacteria	1373	Open in IMG/M
3300009792\|Ga0126374_11387914	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300010043\|Ga0126380_11270813	Not Available	639	Open in IMG/M
3300010043\|Ga0126380_11650264	Not Available	574	Open in IMG/M
3300010043\|Ga0126380_12288856	Not Available	501	Open in IMG/M
3300010358\|Ga0126370_10150021	Not Available	1698	Open in IMG/M
3300010358\|Ga0126370_10366206	Not Available	1171	Open in IMG/M
3300010358\|Ga0126370_10757739	Not Available	860	Open in IMG/M
3300010359\|Ga0126376_10932049	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300010360\|Ga0126372_11661486	Not Available	679	Open in IMG/M
3300010360\|Ga0126372_12613660	Not Available	556	Open in IMG/M
3300010361\|Ga0126378_11757190	Not Available	705	Open in IMG/M
3300010373\|Ga0134128_11342364	Not Available	788	Open in IMG/M
3300010396\|Ga0134126_11194251	Not Available	845	Open in IMG/M
3300010398\|Ga0126383_11901868	Not Available	683	Open in IMG/M
3300010400\|Ga0134122_10301842	Not Available	1375	Open in IMG/M
3300010863\|Ga0124850_1000057	All Organisms → cellular organisms → Bacteria → Proteobacteria	12843	Open in IMG/M
3300012489\|Ga0157349_1001058	Not Available	1486	Open in IMG/M
3300012491\|Ga0157329_1027833	Not Available	571	Open in IMG/M
3300012493\|Ga0157355_1005637	Not Available	837	Open in IMG/M
3300012498\|Ga0157345_1032692	Not Available	591	Open in IMG/M
3300012519\|Ga0157352_1069869	Not Available	566	Open in IMG/M
3300012951\|Ga0164300_10019677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2315	Open in IMG/M
3300012951\|Ga0164300_10600904	Not Available	649	Open in IMG/M
3300012955\|Ga0164298_10778214	Not Available	681	Open in IMG/M
3300012957\|Ga0164303_10029259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2239	Open in IMG/M
3300012957\|Ga0164303_11459052	Not Available	515	Open in IMG/M
3300012971\|Ga0126369_12961322	Not Available	556	Open in IMG/M
3300012985\|Ga0164308_10511111	Not Available	1007	Open in IMG/M
3300012986\|Ga0164304_10606214	Not Available	818	Open in IMG/M
3300013307\|Ga0157372_10355566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1707	Open in IMG/M
3300013308\|Ga0157375_10241078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1968	Open in IMG/M
3300016319\|Ga0182033_10469474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1076	Open in IMG/M
3300016371\|Ga0182034_11108497	Not Available	686	Open in IMG/M
3300017939\|Ga0187775_10450105	Not Available	542	Open in IMG/M
3300017944\|Ga0187786_10008028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium prunaredense	2505	Open in IMG/M
3300017944\|Ga0187786_10151542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	838	Open in IMG/M
3300017944\|Ga0187786_10339804	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300017947\|Ga0187785_10000527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	14229	Open in IMG/M
3300017947\|Ga0187785_10243361	Not Available	803	Open in IMG/M
3300017947\|Ga0187785_10259921	All Organisms → cellular organisms → Bacteria → Proteobacteria	782	Open in IMG/M
3300017966\|Ga0187776_10416289	Not Available	902	Open in IMG/M
3300018029\|Ga0187787_10096754	Not Available	942	Open in IMG/M
3300018029\|Ga0187787_10399715	Not Available	542	Open in IMG/M
3300018058\|Ga0187766_11329378	Not Available	525	Open in IMG/M
3300018060\|Ga0187765_10044980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2250	Open in IMG/M
3300020150\|Ga0187768_1166353	Not Available	510	Open in IMG/M
3300021560\|Ga0126371_10385725	All Organisms → cellular organisms → Bacteria	1541	Open in IMG/M
3300021560\|Ga0126371_10608630	Not Available	1241	Open in IMG/M
3300021560\|Ga0126371_11835744	Not Available	727	Open in IMG/M
3300025911\|Ga0207654_10698380	Not Available	729	Open in IMG/M
3300025914\|Ga0207671_10790451	Not Available	753	Open in IMG/M
3300025931\|Ga0207644_10082043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2384	Open in IMG/M
3300025932\|Ga0207690_10251528	Not Available	1365	Open in IMG/M
3300025942\|Ga0207689_10098898	All Organisms → cellular organisms → Bacteria	2397	Open in IMG/M
3300025972\|Ga0207668_10487737	Not Available	1058	Open in IMG/M
3300025986\|Ga0207658_10587568	Not Available	999	Open in IMG/M
3300026041\|Ga0207639_11657963	Not Available	599	Open in IMG/M
3300026088\|Ga0207641_10798585	Not Available	933	Open in IMG/M
3300027874\|Ga0209465_10319639	Not Available	778	Open in IMG/M
3300031170\|Ga0307498_10246561	Not Available	645	Open in IMG/M
3300031543\|Ga0318516_10035345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium sediminum	2659	Open in IMG/M
3300031716\|Ga0310813_11977006	Not Available	550	Open in IMG/M
3300031720\|Ga0307469_10614079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	974	Open in IMG/M
3300031747\|Ga0318502_10121593	All Organisms → cellular organisms → Bacteria → Proteobacteria	1467	Open in IMG/M
3300031847\|Ga0310907_10151458	Not Available	1065	Open in IMG/M
3300031879\|Ga0306919_10319187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1182	Open in IMG/M
3300031890\|Ga0306925_10108152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2965	Open in IMG/M
3300031892\|Ga0310893_10004861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3397	Open in IMG/M
3300031908\|Ga0310900_10225661	Not Available	1333	Open in IMG/M
3300031908\|Ga0310900_11606873	Not Available	550	Open in IMG/M
3300031912\|Ga0306921_10156554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis	2667	Open in IMG/M
3300031940\|Ga0310901_10007523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2794	Open in IMG/M
3300031944\|Ga0310884_10012919	All Organisms → cellular organisms → Bacteria	3179	Open in IMG/M
3300031954\|Ga0306926_10697515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1232	Open in IMG/M
3300032001\|Ga0306922_11784378	Not Available	606	Open in IMG/M
3300032012\|Ga0310902_10032480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2416	Open in IMG/M
3300032059\|Ga0318533_10408296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	992	Open in IMG/M
3300032075\|Ga0310890_10170157	Not Available	1463	Open in IMG/M
3300032076\|Ga0306924_11713221	Not Available	658	Open in IMG/M
3300032205\|Ga0307472_100012118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4377	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.67%
Host-Associated	Host-Associated	18.70%
Engineered	Engineered	1.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.86%
Plants	Host-Associated → Plants	18.70%
Solid Waste	Engineered → Solid Waste	1.63%
Aquatic	Environmental → Aquatic	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.32%
Grass	Engineered → Solid Waste → Grass	1.63%
Sediment	Environmental → Aquatic → Sediment	0.81%
Roots	Host-Associated → Plants → Roots	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.78%
Loam	Environmental → Terrestrial → Soil → Loam	19.51%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.57%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.88%
Composting	Engineered → Solid Waste → Grass → Composting	1.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.81%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.01%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.13%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.88%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	1.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.38%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	10.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.06%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.44%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.44%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.63%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	1.63%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.81%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.81%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005148	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012489	Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610	Environmental	Open in IMG/M
3300012491	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.8.old.040610	Host-Associated	Open in IMG/M
3300012493	Unplanted soil (control) microbial communities from North Carolina - M.Soil.10.yng.090610	Environmental	Open in IMG/M
3300012498	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410	Host-Associated	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_07304991	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MKTFFSVIACVSIASAADAGFFERLHNNIDEGVRELCVRRPDLCKKLEASQKQKAEATPQGPIQVD
NODE_07402739	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MKKPCVVLACVAIASPTHAGFFERLHNNIDERVRELCAQKPDICRKLEAAQKRNADVTSQNSLGTDPINERNRDK*
INPhiseqgaiiFebDRAFT_1015954123	3300000364	Soil	MKKLFTVLACVSIVSPAHAGFFERLHNNIDEGVREFCGRKPDLCKKLEASQKRKAEATPQNSVQVDQIDQRGRDK*
AF_2010_repII_A01DRAFT_10613751	3300000580	Forest Soil	MKTFFTILACVFIASPAHAGFFERLHNNIDEGVRELCVRKPDLCKKLEASQKRKAEAAPQNSVQVEQIDQRDRDK*
AF_2010_repII_A1DRAFT_100576142	3300000597	Forest Soil	PFVVLVAVLFASPTHAGFFERLHNKLDEGVRELCAQKPDLCKKLEATQKRNANTASQSSIETVQINQRTRDK*
AF_2010_repII_A100DRAFT_10152492	3300000655	Forest Soil	MKTFFTILACVFXASPAHAGFFERLHNNIDEGVRELCVRKPDLCKKLEASQKRKAEAAPQNSVQVEQIDQRDRDK*
Ga0066395_105262631	3300004633	Tropical Forest Soil	MKKPFVFLVCVLFASPTHAGFFERLHNKLDEGVRELCAQKPDLCKKLEATQKRNADTASQSSIETDQINQRTRDK*
Ga0066395_110400662	3300004633	Tropical Forest Soil	AHAGFFERLHNNIDEGVRELCVRKPDLCKKLEAIQKRKAEAAPQNSVQVEQIDQRDRDK*
Ga0066819_10261901	3300005148	Soil	MRKFLLILSCVSIAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSIQTDQVDQRSREK*
Ga0065705_101227883	3300005294	Switchgrass Rhizosphere	MKTFFRILACVSIASPAHAGFFERLHNNIDEGVRELCVRKPDLCKKLEASQKRKAEAAPQNSVQVEQIDQRDRDK*
Ga0070670_1000954172	3300005331	Switchgrass Rhizosphere	MRKFLLILACVSTAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQRSREK*
Ga0066388_1000561906	3300005332	Tropical Forest Soil	MKTAFVVLVCVPFASAAYAGFFERLHNNIDEGVRELCARKPDLCKKLDTDRKRNADVVTQNPTEPDQINQRTHEK*
Ga0066388_1003733422	3300005332	Tropical Forest Soil	MKTFFTVLACASIASAAHAGFFERLHNNIDEGVRELCVRKPDLCKKLEAAQKRKAEATPQNSIQADQIDQRDRDR*
Ga0066388_1037498462	3300005332	Tropical Forest Soil	MKRPFVVLICVFFVSPTHAGFFERLHNNLDEGVRELCARKPDLCKKLEAAQKRNADAAPQSSIETDQIKQRNRDK*
Ga0066388_1037526771	3300005332	Tropical Forest Soil	MKKFLLILTCVPIAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLETSQKQKAETTPMNSIQADQVDQRSREK*
Ga0066388_1044529582	3300005332	Tropical Forest Soil	AGFFERLHNNIDEGVRELCVRKPDFCKKLEAAQKRKAEATSQNSIQADQIDQRDRDK*
Ga0070689_1002350763	3300005340	Switchgrass Rhizosphere	HAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSIQTDQVDQRSREK*
Ga0070687_1002539691	3300005343	Switchgrass Rhizosphere	MRKFLLILSCVSIAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQRSREK*
Ga0070671_1004761981	3300005355	Switchgrass Rhizosphere	HAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQRSREK*
Ga0070714_1005855852	3300005435	Agricultural Soil	MAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSIQTDQVDQRSREK*
Ga0070711_1000829791	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRKFLLILACVSMAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSIQTDQVDQRSREK*
Ga0070705_1008913752	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	ASMRKFLLILACVSMAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAETPMNSIQTDQVDQRSREK*
Ga0070708_1002977412	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKKPFVVLVCLLFASQAHAGFFERLHNNIDEGVRELCARKPDLCKKLEAGQKRNADAAPQSSNETDQINQRDRNK*
Ga0070678_1002312071	3300005456	Miscanthus Rhizosphere	RASMRKFLLILACVSTAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSIQTDQVDQRSREK*
Ga0068867_1003503181	3300005459	Miscanthus Rhizosphere	MRKFLLILACVSMAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQCSREK*
Ga0070695_1009216621	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	SMRKFLLILACVSMAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQRSREK*
Ga0070693_1002175384	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQCSREK*
Ga0070702_1005078631	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQRSREK*
Ga0066905_1004184792	3300005713	Tropical Forest Soil	MKTFFTILACVFIASPAHPGFFERLHNNIDEGVRELCVRKPDLCKKLEASQKRKAEAAPQNSVQVEQIDQRDRDK*
Ga0066903_10000863513	3300005764	Tropical Forest Soil	MKTFFSVIACVSIASAADAGFFERLHNNIDEGVRELCVRRPDLCKKLEASQKQKAEATPQGPIQVDQTDQRGRDK*
Ga0066903_1054806291	3300005764	Tropical Forest Soil	KFLLILTCVPIAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLETSQKQKAETTPMNSIQADQVDQRSREK*
Ga0066903_1063041622	3300005764	Tropical Forest Soil	VLFASPTHAGFFERLHNKLDEGVRELCAQKPDLCKKLEATQKRNADIASQSSIETGQINQRTRDK*
Ga0066903_1064930972	3300005764	Tropical Forest Soil	MKTFFTILACAFIASPAHAGFFERLHNNIDEGVRELCVRKPDLCKKLEASQKRKAEAAPQNSVQVEQIDQRDRDK*
Ga0068858_1001276194	3300005842	Switchgrass Rhizosphere	HAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQCSREK*
Ga0068858_1012169791	3300005842	Switchgrass Rhizosphere	MRKFLLILACVSTAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSIQTDQVDQRSREK*
Ga0075024_1000959212	3300006047	Watersheds	MIKPFAVLSCVFLATPTHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKRSADAASQNSTETDQINQRPRDK*
Ga0075363_1005227052	3300006048	Populus Endosphere	FFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSIQTDQVDQRSREK*
Ga0070712_1004821252	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MVSRQKYCDSMKTFFRILACVSIASPAHAGFFERLHNNIDEGVRELCVRKPDLCKKLEASQKRKAEAAPQNSVQVEQIDQRDRDK*
Ga0074062_109075952	3300006606	Soil	YDVAIAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSIQTDQVDQRSREK*
Ga0075425_1000764898	3300006854	Populus Rhizosphere	MRKFLLILACVSMAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQRSREK*
Ga0079219_109809041	3300006954	Agricultural Soil	MRKFLLILSCVFIAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQRSREK*
Ga0105238_107167861	3300009551	Corn Rhizosphere	CVSIAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQRSREK*
Ga0105249_104184103	3300009553	Switchgrass Rhizosphere	MRKFLLILSCVSIAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSIQT
Ga0126374_113879142	3300009792	Tropical Forest Soil	MKTFFTILACAFIASPAHAGFFERLHNNIDEGVCELCVRKPDLCKKLEASQKRKAEAAPQNSVQVEQI
Ga0126380_112708131	3300010043	Tropical Forest Soil	MKKPCVVLACVAIASRTHAGFFERLHNNIDERVRELCAQKPDICRKLEAAQKRNADVTSQNSLGTDPINERNRDK*
Ga0126380_116502641	3300010043	Tropical Forest Soil	MRKFPLILACVSVAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLETSQKQKAETTPMNSIQADQVDQRSREK*
Ga0126380_122888562	3300010043	Tropical Forest Soil	MKTFFTVLACASIASAANAGFFERLHNNIDEGVRELCLRKPDLCKKLEAAQKRKAEATSQNSIQ
Ga0126370_101500213	3300010358	Tropical Forest Soil	LMKTAFVVLVCVPFASAAYAGFFERLHNNIDEGVRELCARKPDLCKKLDTDRKRNADVVTQNPTEPDQINQRTHEK*
Ga0126370_103662061	3300010358	Tropical Forest Soil	MKTFFTILACVFIALPAHAGFFERLHNNIDEGVRELCVRKPDLCKKLEASQKRKAEAAPQNSVQVEQIDQRDRDK*
Ga0126370_107577392	3300010358	Tropical Forest Soil	MKKPFVVLVCVLFASPTHAGFFERLHNKLDEGVRELCAQKPDLCKKLEATQKRNADIASQSSIETDQINQRTRDK*
Ga0126376_109320492	3300010359	Tropical Forest Soil	MKTFFTILACVFVASPAHAGFFERLHNNIDEGVRELCVRKPDLCKKLEASQKRKAEAAPQNSVQVEQIDQRDRDK*
Ga0126372_116614861	3300010360	Tropical Forest Soil	MKTFFTILACVFIASPAHAGFFERLHNNIDEGVRELCVRKRDLCKKLEANQKRKAEAAPQNSVQVEQIDQRDRDK*
Ga0126372_126136601	3300010360	Tropical Forest Soil	MKKPFVFLVCVLFASPTHAGFFERLHNKLDEGVRELCAQKPDLCKKLEATQKRKADTASQSSIETVQINQRTRDK*
Ga0126378_117571902	3300010361	Tropical Forest Soil	MKKPFVVLVCVLFASPTHAGFFERLHNKLDEGVRELCAQKPDLCKKLEATQKRNADTASQSSIETDQINQRTRDK*
Ga0134128_113423642	3300010373	Terrestrial Soil	MRKFLLILACVSMAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQ
Ga0134126_111942512	3300010396	Terrestrial Soil	MRKFLLILSCVSIAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQCSREK*
Ga0126383_119018681	3300010398	Tropical Forest Soil	MKTFFSVITCVSIASAADAGFFERLHNNIDEGVRELCVRRPDLCKKLEASQKQKAEVTPQSPIQMDQVDQTDQRGRDK*
Ga0134122_103018422	3300010400	Terrestrial Soil	MRKFLLILACVSTAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAETPMNSIQTDQVDQRSREK*
Ga0124850_100005714	3300010863	Tropical Forest Soil	MKKPFVVLVAVLFASPTHAGFFERLHNKLDEGVRELCAQKPDLCKKLEATQKRNANTASQSSIETVQINQRTRDK*
Ga0157349_10010582	3300012489	Unplanted Soil	MRKFLLILACVSMAASAHAGFFERLPNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQRSREK*
Ga0157329_10278331	3300012491	Arabidopsis Rhizosphere	MRKFLLILACVSTAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSNQTDQVDQRSREK*
Ga0157355_10056371	3300012493	Unplanted Soil	NAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSIQTDQVDQRSREK*
Ga0157345_10326921	3300012498	Arabidopsis Rhizosphere	MRKFLLILACVSMAASAHAGFFERLPNNIDEGVRELCARKPDLCKKLEASQEQKTEATPMNSVQTDQVDQRSREK*
Ga0157352_10698691	3300012519	Unplanted Soil	MRKFLLILSCVSLAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQRSREK*
Ga0164300_100196771	3300012951	Soil	MRKFLLMLSCVSIAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQRSREK*
Ga0164300_106009041	3300012951	Soil	ILACVSIASPAHAGFFERLHNNIDEGVRELCVRKPDLCKKLEASQKRKAEAAPQNSVQVEQIDQRDRDK*
Ga0164298_107782141	3300012955	Soil	DSMKTFFRILACVSIASPAHAGFFERLHNNIDEGVRELCVRKPDLCKKLEASQKRKAEAAPQNSVQVEQIDQRDRDK*
Ga0164303_100292592	3300012957	Soil	MRKFLLMLSCVSIAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSIQTDQVDQRSREK*
Ga0164303_114590522	3300012957	Soil	GFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQRSREK*
Ga0126369_129613221	3300012971	Tropical Forest Soil	SCPEICDSMKTLFWVAICVFFASAAHAGFFERLHNNIDEGVRELCARKPDLCKKVELDQERSADAASQNSNATEQANKRTRDK*
Ga0164308_105111112	3300012985	Soil	ERLHNNIDEGVRELCVRKPDLCKKLEASQKRKAEAAPQNSVQVEQIDQRDRDK*
Ga0164304_106062141	3300012986	Soil	AGFFERLHNNIDEGVRELCVRKPDLCKKLEASQKRKAEAAPQNSVQVEQIDQRDRDK*
Ga0157372_103555663	3300013307	Corn Rhizosphere	MVSRQKYCDSMKTFFRILACVSIASPAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQCSREK*
Ga0157375_102410783	3300013308	Miscanthus Rhizosphere	AHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQRSREK*
Ga0182033_104694742	3300016319	Soil	MKTLFWVAICVFFASAAHAGFFERLHNNIDEGVRELCARKPDLCKKLELDQERSADAASQNSNATEQANKHTRDK
Ga0182034_111084972	3300016371	Soil	SCPEICDSMKTLFWVAVCVFFASAAHAGFFERLHNNIDEGVRELCARKPDLCKKLELDQERSADAASQNSNATEQANKHTRDK
Ga0187775_104501051	3300017939	Tropical Peatland	MIKPFVVLTCVFLATPTHAGFFERLHNNIDEGVRELCARKPDLCKKLEARQKRNANAALQNSTEADQINQRTRDK
Ga0187786_100080283	3300017944	Tropical Peatland	MKKPFVVLVCMFFVSPAHAGFFERLHNNIDEGVRELCARKPDLCKKLESGQKRNADAAPQNSIETNQINQRTRDK
Ga0187786_101515422	3300017944	Tropical Peatland	MIKPFVLLTCVLLATPAHAGFFERLHNNIDEGVRELCVRKPDLCKKLEASQKRNAEAAPQNSTEADQINQRPRDK
Ga0187786_103398041	3300017944	Tropical Peatland	MRKFLLILACVSVAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPTNSIQADRVDQRSREK
Ga0187785_100005278	3300017947	Tropical Peatland	MKKSFVVLACLFFASPTHAGFFERLHNNIDEGVRELCARKPDLCKKIEAGQKRNADATPQNSIETDQINQRPAKNSDKAASD
Ga0187785_102433611	3300017947	Tropical Peatland	MKTFFSVIACVSIASTADAGFFERLHNNIDEGVREFCVRRPDLCKKLEASQKRKAEATPPNSIQVDQLDQRNRDK
Ga0187785_102599211	3300017947	Tropical Peatland	MRKFLLILTCVSVAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEAMPTNSIQTDRVDQRSREK
Ga0187776_104162891	3300017966	Tropical Peatland	MIKPFVVLTCVFLATPTHAGFFERLHNNIDEGVRELCARKPDLCKKLEARQRRNADAALQNSTEADQINQRTRGDK
Ga0187787_100967541	3300018029	Tropical Peatland	MIKPFVVLTCVFLATPTHAGFFERLHNNIDEGVRELCARKPDLCKKLEARQKRNADAALQNSTEADQINQRTRDK
Ga0187787_103997151	3300018029	Tropical Peatland	KKFATQICDSMKKPFVVLVCMFFVSPAHAGFFERLHNNIDEGVRELCARKPDLCKKLESGQKRNADAAPQNSIETNQINQRTRDK
Ga0187766_113293782	3300018058	Tropical Peatland	MRKFLLILACVSVAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPTNSIQADQVDQRSREK
Ga0187765_100449804	3300018060	Tropical Peatland	MRKFLLILACVSVAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLKASQKQKVEATPMNSIQADQVDQRSREK
Ga0187768_11663531	3300020150	Tropical Peatland	ACPETCDSMKKSFVVLACLFFASPTHAGFFERLHNNIDEGVRELCARKPDLCKKIEAGQKRNADATPQNSIETDQINQRPAKNSDKAASD
Ga0126371_103857252	3300021560	Tropical Forest Soil	MKTFFTILACAFIASPAHAGFFERLHNNIDEGVRELCVRKPDLCKKLEASQKRKAEAAPQNSVQVEQIDQRDRDK
Ga0126371_106086303	3300021560	Tropical Forest Soil	MKTLFWVAICVFFASAAHAGFFERLHNNIDEGVRELCARKPDLCKKVELDQERSADAASQNSNATEQANKRTRDK
Ga0126371_118357442	3300021560	Tropical Forest Soil	MKKPCVVLACVAIASPTHAGFFERLHNNIDERVRELCAQKPDICRKLEAAQKRNADVTSQNSLGTDPINERNRDK
Ga0207654_106983801	3300025911	Corn Rhizosphere	ASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSIQTDQVDQRSRE
Ga0207671_107904512	3300025914	Corn Rhizosphere	MRKFLLILACVSMAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSIQTDQVDQRSREK
Ga0207644_100820434	3300025931	Switchgrass Rhizosphere	VSTAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSIQTDQVDQRSREK
Ga0207690_102515283	3300025932	Corn Rhizosphere	LILACVSMAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQRSREK
Ga0207689_100988982	3300025942	Miscanthus Rhizosphere	MAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQRSREK
Ga0207668_104877372	3300025972	Switchgrass Rhizosphere	MRKFLLILACVSTAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQRSREK
Ga0207658_105875681	3300025986	Switchgrass Rhizosphere	CVSTAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSIQTDQVDQRSREK
Ga0207639_116579632	3300026041	Corn Rhizosphere	IAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQCSREK
Ga0207641_107985851	3300026088	Switchgrass Rhizosphere	MRKFLLILSCVSIAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQRSREK
Ga0209465_103196392	3300027874	Tropical Forest Soil	MKTFFTILACVFVASPAHAGFFERLHNNIDEGVRELCVRKPDLCKKLEAIQKRKAEAAPQNSVQVEQIDQRDRDK
Ga0307498_102465612	3300031170	Soil	MRKFLLILACASMAASAHAGFFERLHNNIDEGVRELCACKPDLCKKLEASQKQKAEATPMNSVQTDQVDQRSREK
Ga0318516_100353454	3300031543	Soil	MKKPFVVLVAVLFASPTHAAGFFERLHNKLDEGVRELCAQKPDLCKKLEATQKRNANTASQSSIETVQINQRTRDK
Ga0310813_119770061	3300031716	Soil	RKFLLILSCVSIAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSIQTDQVDQRSREK
Ga0307469_106140792	3300031720	Hardwood Forest Soil	MRKFLLILACVSTAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAETPMNSIQTDQVDQRSREK
Ga0318502_101215931	3300031747	Soil	KKPFVVLVAVLFASPTHAAGFFERLHNKLDEGVRELCAQKPDLCKKLEATQKRNANTASQSSIETVQINQRTRDK
Ga0310907_101514582	3300031847	Soil	GFFERLPNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQRSREK
Ga0306919_103191872	3300031879	Soil	MKTLFWVAVCVFFASAAHAGFFERLHNNIDEGVRELCARKPDLCKKLELDQERSADAASQNSNATEQANKHT
Ga0306925_101081522	3300031890	Soil	MKTLFWVAVCVFFASAAHAGFFERLHNNIDEGVRELCARKPDLCKKLELDQERSADAASQNSNATEQANKHTRDK
Ga0310893_100048614	3300031892	Soil	MAASAHAGFFERLPNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQRSREK
Ga0310900_102256613	3300031908	Soil	AHAGFFERLPNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQRSREK
Ga0310900_116068731	3300031908	Soil	MRKFLLILACASMAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQ
Ga0306921_101565545	3300031912	Soil	VCVFFASAAHAGFFERLHNNIDEGVRELCARKPDLCKKLELDQERSADAASQNSNATEQANKHTRDK
Ga0310901_100075234	3300031940	Soil	SAHAGFFERLPNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQRSREK
Ga0310884_100129192	3300031944	Soil	MRKFLLILACASMAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQRSREK
Ga0306926_106975152	3300031954	Soil	MKTLFWVAVCVFYASAAHAGFFERLHNNIDEGVRELCARKPDLCKKLELDQERSADAASQNSNATEQANKHTRDK
Ga0306922_117843782	3300032001	Soil	KTLFWVAVCVFYASAAHAGFFERLHNNIDEGVRELCARKPDLCKKLELDQERSADAASQNSNATEQANKHTRDK
Ga0310902_100324804	3300032012	Soil	IRASMRKFLLILACVSMAASAHAGFFERLHNNIDEGVRELCACKPDLCKKLEASQKQKAEATPMNSVQTDQVDQRSREK
Ga0318533_104082961	3300032059	Soil	MKTLFWVAVCVFFASAAHAGFFERLHNNIDEGVRELCARKPDLCKKLELDQERSADAASQNSNATEQANKHTR
Ga0310890_101701572	3300032075	Soil	MRKFLLILACVSMAASAHAGFFERLPNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQRSREK
Ga0306924_117132212	3300032076	Soil	WVAICVFFASAAHAGFFERLHNNIDEGVRELCARKPDLCKKLELDQERSADAASQNSNATEQANKHTRDK
Ga0307472_1000121187	3300032205	Hardwood Forest Soil	MRKFLLILACVSTAASAHAGFFERLHNNIDEGVRELCARKPDLCKKLEASQKQKAEATPMNSVQTDQVDQCSREK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070398

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences