NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F070367

Metagenome / Metatranscriptome Family F070367

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F070367
Family Type Metagenome / Metatranscriptome
Number of Sequences 123
Average Sequence Length 91 residues
Representative Sequence TFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG
Number of Associated Samples 94
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.81 %
% of genes near scaffold ends (potentially truncated) 98.37 %
% of genes from short scaffolds (< 2000 bps) 91.06 %
Associated GOLD sequencing projects 86
AlphaFold2 3D model prediction Yes
3D model pTM-score0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (99.187 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(34.959 % of family members)
Environment Ontology (ENVO) Unclassified
(65.041 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(69.106 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 20.54%    β-sheet: 21.43%    Coil/Unstructured: 58.04%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF11583AurF 10.57
PF01381HTH_3 3.25
PF13560HTH_31 2.44
PF00793DAHP_synth_1 2.44
PF00072Response_reg 0.81
PF01061ABC2_membrane 0.81
PF02308MgtC 0.81
PF00005ABC_tran 0.81
PF04909Amidohydro_2 0.81
PF11604CusF_Ec 0.81
PF02518HATPase_c 0.81
PF17171GST_C_6 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG1285Magnesium uptake protein YhiD/SapB, involved in acid resistanceInorganic ion transport and metabolism [P] 0.81
COG3174Membrane component of predicted Mg2+ transport system, contains DUF4010 domainInorganic ion transport and metabolism [P] 0.81

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.19 %
UnclassifiedrootN/A0.81 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2189573004|GZGWRS402F3JB7All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300002912|JGI25386J43895_10164231All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300005166|Ga0066674_10074089All Organisms → cellular organisms → Bacteria1561Open in IMG/M
3300005166|Ga0066674_10094544All Organisms → cellular organisms → Bacteria1384Open in IMG/M
3300005166|Ga0066674_10217369All Organisms → cellular organisms → Bacteria909Open in IMG/M
3300005172|Ga0066683_10088936All Organisms → cellular organisms → Bacteria1866Open in IMG/M
3300005172|Ga0066683_10772460All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300005172|Ga0066683_10882416All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300005174|Ga0066680_10830927All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300005175|Ga0066673_10253605All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1019Open in IMG/M
3300005177|Ga0066690_10557476All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300005179|Ga0066684_10102854All Organisms → cellular organisms → Bacteria1753Open in IMG/M
3300005180|Ga0066685_10826217All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300005186|Ga0066676_10048730All Organisms → cellular organisms → Bacteria2398Open in IMG/M
3300005367|Ga0070667_101990638All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300005444|Ga0070694_101200256All Organisms → cellular organisms → Bacteria636Open in IMG/M
3300005445|Ga0070708_100753574All Organisms → cellular organisms → Bacteria916Open in IMG/M
3300005446|Ga0066686_10302802All Organisms → cellular organisms → Bacteria1086Open in IMG/M
3300005446|Ga0066686_10377826All Organisms → cellular organisms → Bacteria967Open in IMG/M
3300005467|Ga0070706_101083730All Organisms → cellular organisms → Bacteria738Open in IMG/M
3300005536|Ga0070697_100078298All Organisms → cellular organisms → Bacteria → Proteobacteria2720Open in IMG/M
3300005540|Ga0066697_10746139All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300005552|Ga0066701_10254311All Organisms → cellular organisms → Bacteria1086Open in IMG/M
3300005552|Ga0066701_10740343All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300005553|Ga0066695_10291200All Organisms → cellular organisms → Bacteria1030Open in IMG/M
3300005556|Ga0066707_10441830All Organisms → cellular organisms → Bacteria844Open in IMG/M
3300005558|Ga0066698_11016063All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300005576|Ga0066708_10505644All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300005586|Ga0066691_10104577All Organisms → cellular organisms → Bacteria1593Open in IMG/M
3300005764|Ga0066903_105395080All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales675Open in IMG/M
3300005840|Ga0068870_11157097All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300006032|Ga0066696_10541167All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300006046|Ga0066652_101528176All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300006175|Ga0070712_101961613All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300006796|Ga0066665_10493993All Organisms → cellular organisms → Bacteria1003Open in IMG/M
3300006797|Ga0066659_10069483All Organisms → cellular organisms → Bacteria2299Open in IMG/M
3300006797|Ga0066659_11232541All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300006797|Ga0066659_11335288All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300006804|Ga0079221_11521483All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300006871|Ga0075434_100359573All Organisms → cellular organisms → Bacteria1477Open in IMG/M
3300006871|Ga0075434_100552730All Organisms → cellular organisms → Bacteria1171Open in IMG/M
3300006904|Ga0075424_102194607All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300007076|Ga0075435_100675900All Organisms → cellular organisms → Bacteria897Open in IMG/M
3300009012|Ga0066710_101714955All Organisms → cellular organisms → Bacteria955Open in IMG/M
3300009012|Ga0066710_102760452All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300009137|Ga0066709_102499834All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300009162|Ga0075423_11166378All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium821Open in IMG/M
3300010301|Ga0134070_10059594All Organisms → cellular organisms → Bacteria1293Open in IMG/M
3300010301|Ga0134070_10195288All Organisms → cellular organisms → Bacteria740Open in IMG/M
3300010304|Ga0134088_10214051All Organisms → cellular organisms → Bacteria924Open in IMG/M
3300010304|Ga0134088_10561719All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300010304|Ga0134088_10720386All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300010320|Ga0134109_10347929All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300010323|Ga0134086_10129133All Organisms → cellular organisms → Bacteria911Open in IMG/M
3300010323|Ga0134086_10407407All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300010325|Ga0134064_10491785All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300010333|Ga0134080_10363402All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300010335|Ga0134063_10375596All Organisms → cellular organisms → Bacteria694Open in IMG/M
3300010336|Ga0134071_10258850All Organisms → cellular organisms → Bacteria868Open in IMG/M
3300010337|Ga0134062_10552810All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300010376|Ga0126381_104907386All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300010400|Ga0134122_10228176Not Available1560Open in IMG/M
3300012199|Ga0137383_10069192All Organisms → cellular organisms → Bacteria2542Open in IMG/M
3300012202|Ga0137363_10863852All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300012203|Ga0137399_11161512All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300012205|Ga0137362_10237211All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1574Open in IMG/M
3300012205|Ga0137362_11404407All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300012211|Ga0137377_10664487All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium977Open in IMG/M
3300012224|Ga0134028_1240251All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300012351|Ga0137386_10059633All Organisms → cellular organisms → Bacteria2648Open in IMG/M
3300012356|Ga0137371_10404776All Organisms → cellular organisms → Bacteria1058Open in IMG/M
3300012929|Ga0137404_10517256All Organisms → cellular organisms → Bacteria1066Open in IMG/M
3300012930|Ga0137407_10604122All Organisms → cellular organisms → Bacteria1029Open in IMG/M
3300012976|Ga0134076_10073011All Organisms → cellular organisms → Bacteria1328Open in IMG/M
3300012977|Ga0134087_10319891All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300014150|Ga0134081_10231732All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300014154|Ga0134075_10245017All Organisms → cellular organisms → Bacteria775Open in IMG/M
3300015053|Ga0137405_1320154All Organisms → cellular organisms → Bacteria2003Open in IMG/M
3300015264|Ga0137403_11521984All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300015374|Ga0132255_100665972All Organisms → cellular organisms → Bacteria1543Open in IMG/M
3300017654|Ga0134069_1077171All Organisms → cellular organisms → Bacteria1070Open in IMG/M
3300017654|Ga0134069_1097946All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium954Open in IMG/M
3300017656|Ga0134112_10427576All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300017657|Ga0134074_1059682All Organisms → cellular organisms → Bacteria1292Open in IMG/M
3300017659|Ga0134083_10243798All Organisms → cellular organisms → Bacteria750Open in IMG/M
3300017659|Ga0134083_10441581All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300018431|Ga0066655_10290613All Organisms → cellular organisms → Bacteria1061Open in IMG/M
3300018431|Ga0066655_10344614All Organisms → cellular organisms → Bacteria977Open in IMG/M
3300018431|Ga0066655_10656026All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300018433|Ga0066667_10563156All Organisms → cellular organisms → Bacteria947Open in IMG/M
3300018433|Ga0066667_11267247All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300018482|Ga0066669_10904195All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300018482|Ga0066669_11276743All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300018482|Ga0066669_12358069All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300019458|Ga0187892_10459647All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria593Open in IMG/M
3300025324|Ga0209640_10399721All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1134Open in IMG/M
3300025325|Ga0209341_10890733All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300025910|Ga0207684_10509564All Organisms → cellular organisms → Bacteria1031Open in IMG/M
3300025910|Ga0207684_11460367All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300025912|Ga0207707_11121318All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300026323|Ga0209472_1133316All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300026324|Ga0209470_1045664All Organisms → cellular organisms → Bacteria2139Open in IMG/M
3300026326|Ga0209801_1087855All Organisms → cellular organisms → Bacteria1357Open in IMG/M
3300026327|Ga0209266_1120251All Organisms → cellular organisms → Bacteria1116Open in IMG/M
3300026327|Ga0209266_1289197All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300026327|Ga0209266_1302684All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300026328|Ga0209802_1218475All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300026334|Ga0209377_1078650All Organisms → cellular organisms → Bacteria1404Open in IMG/M
3300026334|Ga0209377_1191372All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300026528|Ga0209378_1020680All Organisms → cellular organisms → Bacteria3675Open in IMG/M
3300026536|Ga0209058_1036417All Organisms → cellular organisms → Bacteria2959Open in IMG/M
3300026536|Ga0209058_1335512All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300026548|Ga0209161_10023640All Organisms → cellular organisms → Bacteria → Proteobacteria4362Open in IMG/M
3300026548|Ga0209161_10337638All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300027655|Ga0209388_1003435All Organisms → cellular organisms → Bacteria3930Open in IMG/M
3300027748|Ga0209689_1365202All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300027748|Ga0209689_1409232All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300027882|Ga0209590_10410565All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium875Open in IMG/M
3300031740|Ga0307468_100805263All Organisms → cellular organisms → Bacteria802Open in IMG/M
3300031754|Ga0307475_11070375All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300031962|Ga0307479_10661401All Organisms → cellular organisms → Bacteria1025Open in IMG/M
3300032180|Ga0307471_101634240All Organisms → cellular organisms → Bacteria800Open in IMG/M
3300033433|Ga0326726_11492254All Organisms → cellular organisms → Bacteria658Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil34.96%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil19.51%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil11.38%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil9.76%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.69%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.06%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.25%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil1.63%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.81%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.81%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.81%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.81%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.81%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.81%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.81%
Bio-OozeEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.81%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2189573004Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)EnvironmentalOpen in IMG/M
3300002912Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cmEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012224Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019458Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaGEnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025325Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FG2_082919402189573004Grass SoilRKQVDFTTLDSDLNFNDGHYALEPSPDGKRCLVHSTFLVKPGRGMAQSVPIGVLTTGTREAFLAAARGVRKRAGGSG
JGI25386J43895_1016423113300002912Grasslands SoilTSKTAQIAQRVIGRQSNAKVEWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG*
Ga0066674_1007408913300005166SoilTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSSYLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGRTPG*
Ga0066674_1009454413300005166SoilTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKDAFLAAAQGVKKRAAGGTPG*
Ga0066674_1021736913300005166SoilTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSGFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG*
Ga0066683_1008893633300005172SoilAQRVIGRQSNAKVEWTFHPEKHEIDFKTLNSDLNYNDGHYELEPSPDGKRCLVRSKFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTSG*
Ga0066683_1077246013300005172SoilTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRYLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGRTPG*
Ga0066683_1088241623300005172SoilVQLLTVDGSSKTVQIAQRVIGRQDNAKVEWTFHPDQRRIEFKTLASNISYNDGSYQVDPSPDGARCLVHSTFLVHAGQGMAQAVPIGVLAQGTRDAFLTAAQGVKKRAARGAK*
Ga0066680_1083092713300005174SoilTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG*
Ga0066673_1025360533300005175SoilQKRIIDFTTLTSDLSFNDGHYEFEDAPDGKRCLVRTTFLVKEGEGMTQAVPIGVLAQGTHDAFLAAAKGVKNRAIGK*
Ga0066690_1055747613300005177SoilIGRQSNAKVEWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKDAFLAAAQGVKKRAAGGTPG*
Ga0066684_1010285413300005179SoilPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSSYLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGRTPG*
Ga0066685_1082621723300005180SoilHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSGFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG*
Ga0066676_1004873053300005186SoilNILNITATSKTAQVAQRVIGRQSNAKVEWKFDPQKRTIDFTTLSSDLSFNDGHYELEDSPDKKRCLVRTTFLVKEGQGMTQAVPIGVLAQGTHDTFLAAAKGVKNRAAGK*
Ga0070667_10199063813300005367Switchgrass RhizosphereHYQDFVPGVDRTQLLGVEGNTKTVQIAQRVIGRQSNAKVAWTVHPDKQAIDFKTLSSDLNYNDGHYELEPSPDKKRCLVHSTFVVKHGQGMAQAVPIGVLASGTREAFLGAAKGVKKRAVGATS*
Ga0070694_10120025613300005444Corn, Switchgrass And Miscanthus RhizosphereSNAKVKWTFDPAKKHIDFTTVSSDLNYNDGHYEHESSPDGKRCLVRSTFLVKQGQGMAQAVPIGVLAAGTREAFLAAAQGVKKRAAAG*
Ga0070708_10075357433300005445Corn, Switchgrass And Miscanthus RhizosphereQIAQRVIGRQSNAKVQWTFHPDRRQIDFKTLSSDLNYNDGHYELEASPDGRRCLVRSTFLVKHGQGMAQAVPIGVLAAGTREAFLAAAQGVKKRASAAAG*
Ga0066686_1030280233300005446SoilIAQRVIGRQSNAKVEWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG*
Ga0066686_1037782633300005446SoilSNAKVEWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSSYLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGRTPG*
Ga0070706_10108373013300005467Corn, Switchgrass And Miscanthus RhizosphereTPTSKTVQIAQHVIGRQSNAKVEWTFHPEKHEIDFKTLNSDLNYNDGQYALEASPDGKRCLVRTTFLVKEGQGMAQAVPIGVLAAGTKEAFLSAAQGLKKRAVGGKAG*
Ga0070697_10007829813300005536Corn, Switchgrass And Miscanthus RhizosphereDRANILNASDTSKTAQVAQRVIGRQSNAKVEWKFDPQKRTIDFTTLSSDLSFNDGHYELEDSPDKKRCLVRTTFLVKEGQGMTQAVPIGVLAQGTHDTFLAAAKGVKNRAAGK*
Ga0066697_1074613913300005540SoilIGRQSNAKVEWTFHPEKHEIDFKTLNSDLNYNDGHYELEPSPDGKRCLVRSKFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTSG*
Ga0066701_1025431113300005552SoilTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQAVPIGVLAAGTKDAFLAAAQGVKKRAAGSTPG*
Ga0066701_1074034313300005552SoilHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSSYLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGRTPG*
Ga0066695_1029120043300005553SoilTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQAVPIGVLAAGTKDAFLAAAQGVKKRAAGGTPG*
Ga0066707_1044183013300005556SoilFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSQFLVKEGQGMAQSVPIGVLAAGTKDAFLAAAQGVKKRAAGGTPG*
Ga0066698_1101606323300005558SoilQRVIGRQSNAKVEWTFHPEKHEIDFKTLNSDLNYNDGHYELEPSPDGKRCLVRSKFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTSG*
Ga0066708_1050564413300005576SoilIGRQSNAKVEWTFHPEKHEIDFKTLNSDLNYNDGHYELEPSPDGKRCLVRSTFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTSG*
Ga0066691_1010457743300005586SoilDLNYNDGHYDLDPSPDGKRCLVRSTFVVKQGQGLAQAVPIGVLAAGTKEAFLAAAQGVKKRAAGRTPG*
Ga0066903_10539508033300005764Tropical Forest SoilTVAVGENTKTVQIAQHVIGRQSNAKVQWTFLPAKREVAFTTLDSDLSYNDGRYVLSPSPDGTRCLVRSTFLVKEGRGRAQSVPIGVLAAGTRDAFVAAAEGVRKRATRGPG*
Ga0068870_1115709713300005840Miscanthus RhizosphereNAKAEWTFDREKRTIDFKTLSSDLTYTDGHYDYRDSPDGKRCLVHSRFLVREGQGMAQSVPIGVLAAGTRETFLAAAKGVRARAVGAK*
Ga0066696_1054116733300006032SoilTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKDAFLAAAQGVKKRAAGGTPG*
Ga0066652_10152817613300006046SoilIGRQSNAKVEWTFHPEKHEIDFKTLNSDLNYNDGHYELEPSPDGKRCLVRSKFLVKEGQVMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTSG*
Ga0070712_10196161323300006175Corn, Switchgrass And Miscanthus RhizosphereSNAKVKWTFDPERKQVDFTTLDSDLNFNDGHYALEPSPDGKRCLVHSTFLVKPGRGMAQSVPIGVLTTGTREAFLAAARGVRKRAGGSG*
Ga0066665_1049399313300006796SoilRQSNAKVEWTFHPEKHEIDYKTLSSDLNFNDGHWELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG*
Ga0066659_1006948343300006797SoilWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSGFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG*
Ga0066659_1123254113300006797SoilKVEWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSSFRVKEGQGMAQSVPIGVLAAGTKDAFLAAAQGVKKRAAGGTPG*
Ga0066659_1133528813300006797SoilQIAQRVIGRQSNAKVEWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG*
Ga0079221_1152148313300006804Agricultural SoilLLEVEGTTKTIQIAQRVIGRQSNAKVKWTFHPEKRQIDFTTVNSDLNYNDGHYELEASPDGKRCLVRSTFIVKQGQGMAQSVPIGVLAAGTREAFLAAAQGVKKRATGAK*
Ga0075434_10035957333300006871Populus RhizosphereDPDRKQIGFTTLDSDLNFNDGHYEVEASPDGKRCLVHSTFLVKPGRGMAQSVPIGVLTTGTREAFLAAARGVRKRAGGSG*
Ga0075434_10055273033300006871Populus RhizosphereYPEFIPGVDRLNILNITATSKTAQVAQRVIGRQSNAKVEWKFDPQKRTIDFTTLSSDLSFNDGHYELEDSPDKKRCLVRTTFLVKEGQGMTQAVPIGVLAQGTHDTFLAAAKGVKNRAVGK*
Ga0075424_10219460733300006904Populus RhizosphereKWTFHPEKRQIDFTTVNSDLNYNDGHYEPEASPDGKRCLVRSTFIVKQGQGMAQSVPIGVLAAGTREAFLAAAQGVKKRATGAK*
Ga0075435_10067590013300007076Populus RhizosphereIPGVDRTQLLTVDGRSKTIQIAQHVIGRQSNAKVKWTFDPDRKQIGFTTLDSDLNFNDGHYEVEASPDGKRCLVHSTFLVKPGRGMAQSVPIGVLTTGTREAFLAAARGVRKRAGGSG*
Ga0066710_10171495533300009012Grasslands SoilWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSGFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG
Ga0066710_10276045223300009012Grasslands SoilANLLNVTPTSKTVQIAQRVIGRQSNAKVEWTFHPEKHEIDSKTLSSDLNFNDGHWELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGPPG
Ga0066709_10249983423300009137Grasslands SoilANLLNVTPTSKTVQIAQRVIGRQSNAKVEWTFHPEKHEIDYKTLSSDLNFNDGHWELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGPPG*
Ga0075423_1116637813300009162Populus RhizosphereSDLSFNDGHYELEDSPDKKRCLVRTTFLVKEGQGMTQAVPIGVLAQGTHDTFLAAAKGVKNRAAGK*
Ga0134070_1005959443300010301Grasslands SoilWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQAVPIGVLAAGTKDAFLAAAQGVKKRAAGGTPG*
Ga0134070_1019528823300010301Grasslands SoilWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSSYLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGRTPG*
Ga0134088_1021405113300010304Grasslands SoilPEKHEIDFKTLNSDLNYNDGHYELEPSPDGKRCLVRSSYLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGRTPG*
Ga0134088_1056171913300010304Grasslands SoilKVEWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKDAFLAAAQGVKKRAAGGTPG*
Ga0134088_1072038623300010304Grasslands SoilLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVRKRASGGTSG*
Ga0134109_1034792923300010320Grasslands SoilSDLNFNDGHYELEPSPDGKRCLVRSSYLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGRTPG*
Ga0134086_1012913333300010323Grasslands SoilLSSDLNFNDGHYELEPSPDGKRCLVRSGFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG*
Ga0134086_1040740723300010323Grasslands SoilWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKDAFLAAARGVKKRAAGGTPG*
Ga0134064_1049178533300010325Grasslands SoilHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKDAFLAAAQGVKKRAAGGTPG*
Ga0134080_1036340223300010333Grasslands SoilIGRQSNAKVEWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSGFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG*
Ga0134063_1037559633300010335Grasslands SoilLTSDLSFNDGHYEFEDAPDGKRCLVRTTFLVKEGEGMTQAVPIGVLAQGTHDAFLAAAKGVKNRAIGK*
Ga0134071_1025885013300010336Grasslands SoilDFKTLNSDLNYNDGHYELEPSPDGKRCLVRSKFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTSG*
Ga0134062_1055281013300010337Grasslands SoilPTSKTVQIAQRVIGRQSNAKVEWTFHPEKHEIDFRTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKDAFLAAAQGVKKRAAGGTPG*
Ga0126381_10490738623300010376Tropical Forest SoilIPGVDRAQILEVDGGSKTIQIAQRVIGRQSNAKVKWTFHPDKQQIDFTTLNSDLNYNDGHYELQPSPDGKRCLVRSTFIVKPGQGMAQGVPIGVLAAGTREAFLGAAQGVKKRATGAK*
Ga0134122_1022817633300010400Terrestrial SoilGFGLGFSVTHAIDFKTLASDLNFNEGHYELEPSPDGKRCLVHSTFLVKEGQGMAQAVPIGVLAAGTREAFLAAAKGVKKRATGATG*
Ga0137383_1006919213300012199Vadose Zone SoilFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQAVPIGVLAAGTKDAFLAAAQGVKKRASGGTPC*
Ga0137363_1086385213300012202Vadose Zone SoilQIAQRVIGRQSNAKVEWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQAVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG*
Ga0137399_1116151213300012203Vadose Zone SoilQRVIGRQSNAKVEWTFHPEVRAIDFKTLASDLNYNDGHYALEASPDGKRCLVRTTFLVKQGQGMAQAVPIGVLAAGTREAFLAAAQGVKKRAAAAAG*
Ga0137362_1023721143300012205Vadose Zone SoilVIGRQSNAKVEWKFDRQKRIIDFTTLTSDLSFNDGHYEFEDAPDGKRCLVRTTFLVKEGEGMTQAVPIGVLAQGTHDAFLAAAKGVKNRAVRK*
Ga0137362_1140440713300012205Vadose Zone SoilHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRYLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGRTPG*
Ga0137377_1066448713300012211Vadose Zone SoilEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG*
Ga0134028_124025123300012224Grasslands SoilWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTSG*
Ga0137386_1005963313300012351Vadose Zone SoilFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQAVPIGVLAAGTKDAFLAAAQGVKKRAAGGTPG*
Ga0137371_1040477633300012356Vadose Zone SoilVTPTSKTVQIAQRVIGRQSNAKVEWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG*
Ga0137404_1051725613300012929Vadose Zone SoilQSNAKVEWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKDAFLAAAQGVKKRAAGGTPG*
Ga0137407_1060412213300012930Vadose Zone SoilHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSSYLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGRTPG*
Ga0134076_1007301143300012976Grasslands SoilRANLLNVTPTSKTVQIAQRVIGRQSNAKVEWTFHLEKHEIALQTLSSDLNFNDCHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG*
Ga0134087_1031989113300012977Grasslands SoilKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSSYLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTSG*
Ga0134081_1023173213300014150Grasslands SoilPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKDAFLAAAQGVKKRAAGGTPG*
Ga0134075_1024501723300014154Grasslands SoilRVIGRQSNAKVEWTFHPEKHEIDFKTLNSDLNYNDGHYELEPSPDGKRCLVRSKFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTSG*
Ga0137405_132015453300015053Vadose Zone SoilMAQRVIGRQSNAKVEWTFHPEKHEIDFKTLNSDLNYNDGHYELEPSPDGKRCLVRSNFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTSG*
Ga0137403_1152198413300015264Vadose Zone SoilQRVIGRQSNAKVEWKFDRQKRIIDFTTLTSDLSFNDGHYEFEDAPDGKRCLVRTTFLVKEGEGMTQAVPIGVLAQGTHDAFLAAAKGVKNRAIGK*
Ga0132255_10066597233300015374Arabidopsis RhizosphereIAQHVIGRQSNAKVKWTFDPERKQVDFTTLDSDLNFNDGHYALEPSPDGKRCLVHSTFLVKPGRGMAQSVPIGVLTTGTREAFLAAARGVRKRAGGSG*
Ga0134069_107717113300017654Grasslands SoilIGRQSNAKVEWTFHPEKHEIDFKTLNSDLNYNDGHYELEPSPDGKRCLVRSKFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTSG
Ga0134069_109794613300017654Grasslands SoilPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG
Ga0134112_1042757613300017656Grasslands SoilRANLLNVTPTSKTAQMAQRVIGRQSNAKVEWTFHPEKHEIDSKTLSSDLNFNDGHWELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG
Ga0134074_105968213300017657Grasslands SoilKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSSYLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGRTPG
Ga0134083_1024379813300017659Grasslands SoilQSNAKVEWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRYLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGRTPG
Ga0134083_1044158113300017659Grasslands SoilNLLNVTPTSKTVQIAQRVIGRQSNAKVEWTFHPEKHEIDFRTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKDAFLAAAQGVKKRAAGGTPG
Ga0066655_1029061313300018431Grasslands SoilNLLNVTPTSKTVQIAQRVIGRQSNAKVEWTFHPEKHEIDFRTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKDAFLAAARGVKKRAAGGTPG
Ga0066655_1034461433300018431Grasslands SoilTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG
Ga0066655_1065602613300018431Grasslands SoilTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSSYLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGRTPG
Ga0066667_1056315633300018433Grasslands SoilWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSSYLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGRTPG
Ga0066667_1126724713300018433Grasslands SoilIGRQSNAKVEWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSSFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG
Ga0066669_1090419513300018482Grasslands SoilQSNAKVEWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSGFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG
Ga0066669_1127674333300018482Grasslands SoilVQIAQRVIGRQSNAKVEWTFHPEKHEIDFRTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKDAFLAAARGVKKRAAGGTPG
Ga0066669_1235806923300018482Grasslands SoilRLIDFTTLSSDLNFNDGHYELDPSPDGKRCLVRTTFLVKQGQGMTQAVPIGVLAAGTREAFIAAARGVKKRAAAAG
Ga0187892_1045964723300019458Bio-OozeVISSQSSAKVEWTFEPPHRIAFRTLTSDLAFNDGSYEFEPSPDGKRCLVKSTFLVRQGEGRGQSVPMTVLAQATRDNFLAAAGGVKKRAAAKP
Ga0209640_1039972123300025324SoilIDFKTLASDLNFNDGHYEVEDSPDGKRCLVRSTFLVKHGEGRAQAVPIGVLAAGTRDAFLAAAQGVKKRAAQAP
Ga0209341_1089073323300025325SoilSNAKVEWTFDAPRRRIDFKTLASDLNFNDGHYEVEDSPDGKRCLVRSTFLVKHGEGRAQAVPIGVLAAGTRDAFLAAAQGVKKRAAQAP
Ga0207684_1050956433300025910Corn, Switchgrass And Miscanthus RhizosphereVDRSQILEVDGTTKTVQIAQRVIGRQSNAKVKWTFHPEKRQIDFTTVNSDLNYNDGHYELEASPDGKRCLVRSTFIVKQGQGMAQAVPIGVLAAGTREAFLSAAQGVKKRATGAK
Ga0207684_1146036723300025910Corn, Switchgrass And Miscanthus RhizosphereFTTVASDLNYNDGHYELEASPDGKRCLVRSTFLVKQGQGMAQAVPIGVLAAGTREAFLAAAQGVKKRAAGQK
Ga0207707_1112131813300025912Corn RhizosphereKREIDFKTLQADLNYNDGSYRLEESPDGRRCLVHTTFIVREGQGMSQAVPIGVLTAGTREAFLSAAKGVKSRAVGTRRTG
Ga0209472_113331633300026323SoilEWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSSYLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGRTPG
Ga0209470_104566453300026324SoilEWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQAVPIGVLAAGTKDAFLAAAQGVKKRAAGGTPG
Ga0209801_108785513300026326SoilIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSGFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG
Ga0209266_112025143300026327SoilEWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKDAFLAAARGVKKRAAGGTPG
Ga0209266_128919723300026327SoilGTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSGFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG
Ga0209266_130268423300026327SoilKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG
Ga0209802_121847513300026328SoilWKFDRQKRIIDFTTLTSDLSFNDGHYEFEDAPDGKRCLVRTTFLVKEGEGMTQAVPIGVLAQGTHDAFLAAAKGVKNRAIGK
Ga0209377_107865043300026334SoilPGVDRANILNASATSKTAQVAQRVIGRQSNAKVEWKFDRQKRIIDFTTLTSDLSFNDGHYEFEDAPDGKRCLVRTTFLVKEGEGMTQAVPIGVLAQGTHDAFLAAAKGVKNRAIGK
Ga0209377_119137223300026334SoilEWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSGFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG
Ga0209378_102068013300026528SoilKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQAVPIGVLAAGTKDAFLAAAQGVKKRAAGSTPG
Ga0209058_103641713300026536SoilSDLNFNDGHYELEPSPDGKRCLVRSGFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG
Ga0209058_133551213300026536SoilGVDRANLLNVTPTSKTAQIAQRVIGRQSNAKVEWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG
Ga0209161_1002364063300026548SoilLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQAVPIGVLAAGTKDAFLAAAQGVKKRAAGSTPG
Ga0209161_1033763823300026548SoilSSDLNFNDGHYELEPSPDGKRCLVRSGFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG
Ga0209388_100343553300027655Vadose Zone SoilRANLLNVTPTSKTAQIAQRVIGRQSNAKVEWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQAVPIGVLAAGTKEAFLAAAQGVKKRAAGGTPG
Ga0209689_136520213300027748SoilEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSSYLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGRTPG
Ga0209689_140923223300027748SoilILNASATSKTAQVAQRVIGRQSNAKVEWKFDRQKRIIDFTTLTSDLSFNDGHYEFEDAPDGKRCLVRTTFLVKEGEGMTQAVPIGVLAQGTHDAFLAAAKGVKNRAIGK
Ga0209590_1041056513300027882Vadose Zone SoilKFDGQKRIIDFTTLSSDLSFNDGHYEFENSPDGKRCLVRSTFLVKEGEGMTQAVPIGVLAQGTHDAFLAAAKGVKNRAIGK
Ga0307468_10080526323300031740Hardwood Forest SoilAQRVIGRQSNAKVAWTVHPDKQTIDFKTLASDLNYNDGHYALEPSPDKKRCLVRSTFVVKQGQGMAQAVPIGVLASGTREAFLGAAKGVKKRAVGATG
Ga0307475_1107037533300031754Hardwood Forest SoilRIDFTTLSSDLNYNDGHYELDSSPDGRRCLVRSTFLVKQGQGMAQAVPIGVLAAGTREAFLAAAHGVKKRAASAG
Ga0307479_1066140133300031962Hardwood Forest SoilRVIGRQSNAKVEWTFHPEKHEIDFKTLSSDLNFNDGHYELEPSPDGKRCLVRSRFLVKEGQGMAQSVPIGVLAAGTKEAFLAAAQGVKKRAAGARPS
Ga0307471_10163424013300032180Hardwood Forest SoilPEFIPGVDRTQLLTVTPTSKTIQIAQRVIGRQSNAKVEWAFNPEARTIDFTTLASDLNYNDGHYALESSPDGKRCLVRSTFIVKEGQGMAQAVPIGVLAAGTREAFLGAAQGVKKRATGA
Ga0326726_1149225423300033433Peat SoilQMVTVTPNSKTIQIAQRVIGRQSNAKVEWKFDRDKREIDFKTLQADLNYNDGSYRLEESPDGRRCLVRTTFLVREGQGMSQAVPIGVLTAGTREAFLSAAKGVKSRAVGTRRTG

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.