NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F070310

Metagenome / Metatranscriptome Family F070310

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F070310
Family Type Metagenome / Metatranscriptome
Number of Sequences 123
Average Sequence Length 45 residues
Representative Sequence MTEELEQELRMLGVLDHKTPAVEIDAEPIWIRDDVVFDEDGQPNF
Number of Associated Samples 79
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 86.99 %
% of genes near scaffold ends (potentially truncated) 19.51 %
% of genes from short scaffolds (< 2000 bps) 75.61 %
Associated GOLD sequencing projects 64
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (68.293 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(30.081 % of family members)
Environment Ontology (ENVO) Unclassified
(74.797 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(87.805 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 22.22%    β-sheet: 8.89%    Coil/Unstructured: 68.89%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF02511Thy1 7.32
PF07486Hydrolase_2 7.32
PF13155Toprim_2 4.07
PF00145DNA_methylase 2.44
PF03237Terminase_6N 1.63
PF06568DUF1127 1.63
PF02562PhoH 0.81
PF03864Phage_cap_E 0.81
PF04545Sigma70_r4 0.81
PF07463NUMOD4 0.81
PF027395_3_exonuc_N 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG1351Thymidylate synthase ThyX, FAD-dependent familyNucleotide transport and metabolism [F] 7.32
COG3773Cell wall hydrolase CwlJ, involved in spore germinationCell cycle control, cell division, chromosome partitioning [D] 7.32
COG0270DNA-cytosine methylaseReplication, recombination and repair [L] 2.44
COG5457Uncharacterized conserved protein YjiS, DUF1127 familyFunction unknown [S] 1.63
COG02585'-3' exonuclease Xni/ExoIX (flap endonuclease)Replication, recombination and repair [L] 0.81
COG1702Phosphate starvation-inducible protein PhoH, predicted ATPaseSignal transduction mechanisms [T] 0.81
COG1875Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domainsGeneral function prediction only [R] 0.81


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A68.29 %
All OrganismsrootAll Organisms31.71 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10001442Not Available19104Open in IMG/M
3300000101|DelMOSum2010_c10013561Not Available5082Open in IMG/M
3300000101|DelMOSum2010_c10019745All Organisms → Viruses → Predicted Viral3968Open in IMG/M
3300000101|DelMOSum2010_c10098983All Organisms → Viruses → Predicted Viral1218Open in IMG/M
3300000101|DelMOSum2010_c10109936Not Available1116Open in IMG/M
3300000101|DelMOSum2010_c10111149Not Available1106Open in IMG/M
3300000101|DelMOSum2010_c10144178Not Available887Open in IMG/M
3300000101|DelMOSum2010_c10147155Not Available871Open in IMG/M
3300000101|DelMOSum2010_c10219307Not Available622Open in IMG/M
3300000101|DelMOSum2010_c10254591Not Available550Open in IMG/M
3300000115|DelMOSum2011_c10167355Not Available637Open in IMG/M
3300000115|DelMOSum2011_c10210505Not Available536Open in IMG/M
3300000116|DelMOSpr2010_c10066024All Organisms → Viruses → Predicted Viral1494Open in IMG/M
3300000117|DelMOWin2010_c10106521All Organisms → Viruses → Predicted Viral1012Open in IMG/M
3300001346|JGI20151J14362_10162897Not Available652Open in IMG/M
3300001352|JGI20157J14317_10079010All Organisms → Viruses → Predicted Viral1294Open in IMG/M
3300001460|JGI24003J15210_10003203Not Available7108Open in IMG/M
3300003540|FS896DNA_10557037Not Available507Open in IMG/M
3300004097|Ga0055584_101123525All Organisms → cellular organisms → Bacteria821Open in IMG/M
3300004461|Ga0066223_1225996Not Available600Open in IMG/M
3300005747|Ga0076924_1094154Not Available9323Open in IMG/M
3300005913|Ga0075108_10001149Not Available13653Open in IMG/M
3300005941|Ga0070743_10131547Not Available835Open in IMG/M
3300006029|Ga0075466_1090089Not Available844Open in IMG/M
3300006029|Ga0075466_1100731Not Available784Open in IMG/M
3300006029|Ga0075466_1107181Not Available752Open in IMG/M
3300006029|Ga0075466_1177604Not Available536Open in IMG/M
3300006191|Ga0075447_10004722Not Available5999Open in IMG/M
3300006191|Ga0075447_10027210All Organisms → Viruses → Predicted Viral2221Open in IMG/M
3300006352|Ga0075448_10099891All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-6910Open in IMG/M
3300006752|Ga0098048_1121133Not Available786Open in IMG/M
3300006803|Ga0075467_10218739All Organisms → Viruses → Predicted Viral1049Open in IMG/M
3300006810|Ga0070754_10448952Not Available559Open in IMG/M
3300006920|Ga0070748_1086195All Organisms → Viruses → Predicted Viral1208Open in IMG/M
3300006920|Ga0070748_1132639Not Available933Open in IMG/M
3300006921|Ga0098060_1081881Not Available925Open in IMG/M
3300007229|Ga0075468_10089863Not Available986Open in IMG/M
3300007229|Ga0075468_10094962Not Available951Open in IMG/M
3300007229|Ga0075468_10098049Not Available932Open in IMG/M
3300007229|Ga0075468_10214477Not Available556Open in IMG/M
3300007276|Ga0070747_1120891Not Available955Open in IMG/M
3300007276|Ga0070747_1171877Not Available773Open in IMG/M
3300007276|Ga0070747_1199336Not Available706Open in IMG/M
3300007540|Ga0099847_1081394Not Available997Open in IMG/M
3300007540|Ga0099847_1130324Not Available755Open in IMG/M
3300007540|Ga0099847_1132426Not Available747Open in IMG/M
3300007540|Ga0099847_1208932Not Available568Open in IMG/M
3300007542|Ga0099846_1280345Not Available574Open in IMG/M
3300009024|Ga0102811_1109869Not Available1032Open in IMG/M
3300009050|Ga0102909_1142683Not Available576Open in IMG/M
3300009055|Ga0102905_1075380Not Available684Open in IMG/M
3300009079|Ga0102814_10127607Not Available1392Open in IMG/M
3300009428|Ga0114915_1020745All Organisms → Viruses → Predicted Viral2356Open in IMG/M
3300009435|Ga0115546_1170053Not Available762Open in IMG/M
3300009436|Ga0115008_10431729Not Available936Open in IMG/M
3300009437|Ga0115556_1180367Not Available767Open in IMG/M
3300009449|Ga0115558_1423862Not Available517Open in IMG/M
3300009495|Ga0115571_1096232All Organisms → Viruses → Predicted Viral1289Open in IMG/M
3300009495|Ga0115571_1111354All Organisms → Viruses → Predicted Viral1177Open in IMG/M
3300010300|Ga0129351_1134048Not Available984Open in IMG/M
3300010316|Ga0136655_1080489Not Available993Open in IMG/M
3300010368|Ga0129324_10036424All Organisms → Viruses → Predicted Viral2317Open in IMG/M
3300013010|Ga0129327_10433566Not Available702Open in IMG/M
3300017697|Ga0180120_10144615All Organisms → Viruses → Predicted Viral1011Open in IMG/M
3300017697|Ga0180120_10217982Not Available785Open in IMG/M
3300017697|Ga0180120_10433892Not Available513Open in IMG/M
3300017709|Ga0181387_1074422Not Available684Open in IMG/M
3300017719|Ga0181390_1000134Not Available29497Open in IMG/M
3300017738|Ga0181428_1006887All Organisms → Viruses → Predicted Viral2584Open in IMG/M
3300018642|Ga0188867_1002524Not Available867Open in IMG/M
3300020347|Ga0211504_1132417Not Available550Open in IMG/M
3300020428|Ga0211521_10092151All Organisms → Viruses → Predicted Viral1476Open in IMG/M
3300021371|Ga0213863_10117739All Organisms → Viruses → Predicted Viral1248Open in IMG/M
3300021375|Ga0213869_10112398All Organisms → Viruses → Predicted Viral1312Open in IMG/M
3300021375|Ga0213869_10140306All Organisms → Viruses → Predicted Viral1138Open in IMG/M
3300021375|Ga0213869_10192797Not Available923Open in IMG/M
3300021389|Ga0213868_10109722All Organisms → Viruses → Predicted Viral1764Open in IMG/M
3300021957|Ga0222717_10002734Not Available13494Open in IMG/M
3300021957|Ga0222717_10068270All Organisms → Viruses → Predicted Viral2272Open in IMG/M
3300021957|Ga0222717_10201372All Organisms → Viruses → Predicted Viral1181Open in IMG/M
3300022053|Ga0212030_1027991Not Available777Open in IMG/M
3300022053|Ga0212030_1032022Not Available732Open in IMG/M
3300022061|Ga0212023_1001524All Organisms → Viruses → Predicted Viral2301Open in IMG/M
3300022061|Ga0212023_1036319Not Available685Open in IMG/M
3300022072|Ga0196889_1000300Not Available15687Open in IMG/M
3300022072|Ga0196889_1017603All Organisms → Viruses → Predicted Viral1507Open in IMG/M
3300022072|Ga0196889_1022854All Organisms → Viruses → Predicted Viral1294Open in IMG/M
3300022169|Ga0196903_1042461Not Available528Open in IMG/M
3300022178|Ga0196887_1016470All Organisms → Viruses → Predicted Viral2258Open in IMG/M
3300022178|Ga0196887_1025382All Organisms → Viruses → Predicted Viral1710Open in IMG/M
3300022178|Ga0196887_1133021Not Available523Open in IMG/M
3300022837|Ga0222711_1005641All Organisms → Viruses → Predicted Viral2350Open in IMG/M
3300024343|Ga0244777_10779038Not Available566Open in IMG/M
3300025070|Ga0208667_1009996All Organisms → Viruses → Predicted Viral2211Open in IMG/M
3300025120|Ga0209535_1001180Not Available17958Open in IMG/M
3300025138|Ga0209634_1000698Not Available25688Open in IMG/M
3300025276|Ga0208814_1000184Not Available45505Open in IMG/M
3300025276|Ga0208814_1004133Not Available5844Open in IMG/M
3300025543|Ga0208303_1004969All Organisms → Viruses → Predicted Viral4602Open in IMG/M
3300025645|Ga0208643_1073327Not Available991Open in IMG/M
3300025652|Ga0208134_1031425All Organisms → Viruses → Predicted Viral1864Open in IMG/M
3300025652|Ga0208134_1142757Not Available612Open in IMG/M
3300025806|Ga0208545_1094786Not Available791Open in IMG/M
3300025809|Ga0209199_1011235Not Available6556Open in IMG/M
3300025816|Ga0209193_1082771Not Available825Open in IMG/M
3300025880|Ga0209534_10180387All Organisms → Viruses → Predicted Viral1079Open in IMG/M
3300025887|Ga0208544_10070687All Organisms → Viruses → Predicted Viral1633Open in IMG/M
3300027668|Ga0209482_1000314Not Available43383Open in IMG/M
3300027751|Ga0208304_10178140Not Available773Open in IMG/M
3300027833|Ga0209092_10000442Not Available40530Open in IMG/M
3300028125|Ga0256368_1021981All Organisms → Viruses → Predicted Viral1129Open in IMG/M
3300028125|Ga0256368_1024855Not Available1065Open in IMG/M
3300028126|Ga0228648_1046584Not Available802Open in IMG/M
3300031519|Ga0307488_10033160All Organisms → Viruses → Predicted Viral4105Open in IMG/M
3300031519|Ga0307488_10053898All Organisms → Viruses → Predicted Viral3101Open in IMG/M
3300031519|Ga0307488_10430948Not Available806Open in IMG/M
3300031519|Ga0307488_10574508Not Available659Open in IMG/M
3300031519|Ga0307488_10660619Not Available597Open in IMG/M
3300031608|Ga0307999_1121717Not Available603Open in IMG/M
3300031621|Ga0302114_10025521All Organisms → Viruses → Predicted Viral3103Open in IMG/M
3300031658|Ga0307984_1055141All Organisms → Viruses → Predicted Viral1230Open in IMG/M
3300031658|Ga0307984_1144276Not Available668Open in IMG/M
3300033742|Ga0314858_178224Not Available546Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous30.08%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine11.38%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine7.32%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient5.69%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine5.69%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater4.88%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine4.88%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine4.88%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine4.06%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine3.25%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine3.25%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean2.44%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine2.44%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.44%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater2.44%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake0.81%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.81%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine0.81%
Diffuse Hydrothermal Flow Volcanic VentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent0.81%
Saline LakeEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake0.81%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300001346Pelagic Microbial community sample from North Sea - COGITO 998_met_01EnvironmentalOpen in IMG/M
3300001352Pelagic Microbial community sample from North Sea - COGITO 998_met_07EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300003540Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS896_ElGuapo_DNAEnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300004461Marine viral communities from Newfoundland, Canada BC-2EnvironmentalOpen in IMG/M
3300005747Seawater microbial communities from Vineyard Sound, MA, USA - control T14EnvironmentalOpen in IMG/M
3300005913Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK1EnvironmentalOpen in IMG/M
3300005941Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697EnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006191Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNAEnvironmentalOpen in IMG/M
3300006352Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNAEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNAEnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300009024Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705EnvironmentalOpen in IMG/M
3300009050Estuarine microbial communities from the Columbia River estuary - metaG 1557A-02EnvironmentalOpen in IMG/M
3300009055Estuarine microbial communities from the Columbia River estuary - metaG 1556B-3EnvironmentalOpen in IMG/M
3300009079Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741EnvironmentalOpen in IMG/M
3300009428Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55EnvironmentalOpen in IMG/M
3300009435Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413EnvironmentalOpen in IMG/M
3300009436Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M MetagenomeEnvironmentalOpen in IMG/M
3300009437Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414EnvironmentalOpen in IMG/M
3300009449Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426EnvironmentalOpen in IMG/M
3300009495Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531EnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300010316Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300013010Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNAEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017709Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27EnvironmentalOpen in IMG/M
3300017719Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21EnvironmentalOpen in IMG/M
3300017738Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12EnvironmentalOpen in IMG/M
3300018642Metatranscriptome of marine microbial communities from Baltic Sea - GS695_0p1EnvironmentalOpen in IMG/M
3300020347Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556109-ERR598994)EnvironmentalOpen in IMG/M
3300020428Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)EnvironmentalOpen in IMG/M
3300021371Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300021389Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300022053Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022061Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v2)EnvironmentalOpen in IMG/M
3300022072Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)EnvironmentalOpen in IMG/M
3300022169Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022178Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)EnvironmentalOpen in IMG/M
3300022837Saline water microbial communities from Ace Lake, Antarctica - #1699EnvironmentalOpen in IMG/M
3300024343Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fractionEnvironmentalOpen in IMG/M
3300025070Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025276Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025645Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025806Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025809Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes)EnvironmentalOpen in IMG/M
3300025816Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 (SPAdes)EnvironmentalOpen in IMG/M
3300025880Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)EnvironmentalOpen in IMG/M
3300025887Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027668Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027751Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713 (SPAdes)EnvironmentalOpen in IMG/M
3300027833Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300028125Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SBEnvironmentalOpen in IMG/M
3300028126Seawater microbial communities from Monterey Bay, California, United States - 60DEnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031608Marine microbial communities from water near the shore, Antarctic Ocean - #1EnvironmentalOpen in IMG/M
3300031621Marine microbial communities from Western Arctic Ocean, Canada - AG5_SurfaceEnvironmentalOpen in IMG/M
3300031658Marine microbial communities from Ellis Fjord, Antarctic Ocean - #78EnvironmentalOpen in IMG/M
3300033742Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawaterEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_10001442133300000101MarineMSEELKRELRMLGVLDYKTPTVENDTPPIWVRDNVTFDDEGEPNF*
DelMOSum2010_1001356133300000101MarineMTEELEQELRMLGVLDHKTPAVEIDAEPMWIRDDVVFDEDGQPNF*
DelMOSum2010_1001974523300000101MarineMTEELERELRMLGVLDQKTPAVEIDAEPIWIRDDVVFDEDGQPNF*
DelMOSum2010_1009898333300000101MarineMTEELERELRMLGVLDHKTPAVEIDAEPIWIRDDVVFDEDGQPNF*
DelMOSum2010_1010993623300000101MarineMTEELEQELRMLGVLDHKTPAVEIDAEPIWIRDDVVFDEDGEPHF*
DelMOSum2010_1011114923300000101MarineMTEELKRELRMLGVLDQKTPAVEIDKEPMWVRDDVVFDEDGQPNF*
DelMOSum2010_1014417833300000101MarineMTEELEQELRMLGVLDHKTPAVEIDAEPIWIRDDVVFDEDGQPNF*
DelMOSum2010_1014715533300000101MarineMTEELERELRQMGVLDHKTPAVENDVEPIWIRDDVVFDEDGQPNF*
DelMOSum2010_1021930713300000101MarineMELDKWRVSMTEELERELRQMGVLDHKTPAVEIDKEPIWIRDDVVFDEDGQPNF*
DelMOSum2010_1025459133300000101MarineMSVVELGKWRVIMTEELERELRQMGVLDHKTPAVEIDAEPIWIRDDVVFDEDGQPNF*
DelMOSum2011_1016735523300000115MarineMTEELERELRQMGVLDHKTPAVEIDAEPIWIRDDVVFDEDGQPNF*
DelMOSum2011_1021050533300000115MarineMNEELEQELRMLGVLDHKTPAVEIDAEPEPMWIRDDVVFDEDGQPNF*
DelMOSpr2010_1006602433300000116MarineMTEELEQELRMLGVLDHKTPIVEIDAEPIWIRDDVVFDEDGQPNF*
DelMOWin2010_1010652123300000117MarineMXIEELEQELRMLGVLDHKTPAVEIDKEPIWIRDDVVFDEDGQPNF*
JGI20151J14362_1016289713300001346Pelagic MarineELRMLGVLDHKTPAVEIDKEPIWIRDDVVFDEDGQPNF*
JGI20157J14317_1007901023300001352Pelagic MarineMTEELEQELRMLGVLDHKTPVVENDVYPIWIRDDVVFDEDGQPNF*
JGI24003J15210_1000320343300001460MarineMTEELEKELRMLGVLDHKTPAVEIDKEPIWIRDDDMWEIDT*
FS896DNA_1055703723300003540Diffuse Hydrothermal Flow Volcanic VentMSEELKRELRMLGVLDYKTPTVENDTSPIWVRDNVTFDDEGEPNF*
Ga0055584_10112352513300004097Pelagic MarineKNMSEELKRELRMLGVLDYKTPTVENDTPPIWVRDDVTFDDEGEPNF*
Ga0066223_122599613300004461MarineMTEELEQELRMLGVLDHKTPAVEIDAEPMWIRDDVVFDEHGQPNF*
Ga0076924_1094154183300005747MarineMTEELEQELRMLGVLDHKTPAVEIDAEPEPMWIRDDVVFDEDGQPNF*
Ga0075108_1000114953300005913Saline LakeMTEELERELRQMGVLDHKTPAVEIDVHPIWIRDDVVFDEGGQPNF*
Ga0070743_1013154723300005941EstuarineMSEELKRELRMLGVLDYKTPTVENDTPPIWVRDDVTFDDEGEPNF*
Ga0075466_109008923300006029AqueousMTEELEQELRMLGVLDHKTPAVEIDAEPMWVRDDVVFDEDGQPNF*
Ga0075466_110073133300006029AqueousMTEELEQELRMLGVLDHKTPAVEIDKEPIWIRDDVVFDEDGQPNF*
Ga0075466_110718123300006029AqueousMTEELERELRQMGVLDHKTPAVEIDKEPMWVRDDVVFDEDGQPNF*
Ga0075466_117760413300006029AqueousMMTEELEQELRMLGVLDHKTPAVEIDAEPMWIRDDVVFDEDGQPNF*
Ga0075447_10004722133300006191MarineRELRQMGVLDHKTPAVEIDVYPIWIRDDVVFDEDGQPNF*
Ga0075447_1002721043300006191MarineMSEELKKELRMLGVLDHKVPTMENDTPPIWVRDDVTFDDNGEPNF*
Ga0075448_1009989113300006352MarineERIMTEELERELRQMGVLDHKTPAVEIDVYPIWIRDDVVFDEDGQPNF*
Ga0098048_112113323300006752MarineMTEELEQELRMLGVLDYKTPAVEIDAEPMWVRDDVVFDEDGQPNF*
Ga0075467_1021873923300006803AqueousMTEELEQELRMLGVLDQKTPVVENDVYPIWIRDDVVFDEDGQPNF*
Ga0070754_1044895213300006810AqueousELEQELRMLGVLDHKTPAVEIDAEPIWIRDDVVFDEDGQPNF*
Ga0070748_108619523300006920AqueousMTEELEQELRMLGVLDHKTPAVEIDVEPIWIRDDVVFDEDGQPNF*
Ga0070748_113263933300006920AqueousMTEELEQELRMLGVLDHKTPAVEIDKEPMWVRDDVVFDEDGQPNF*
Ga0098060_108188133300006921MarineMTEELEQELRMLGVLDYKTPAVEIDKEPIWIRDDVVFDEDGQPNF*
Ga0075468_1008986333300007229AqueousMTEELEQELRMLGVLDHKTPAMEIDAEPEPMWIRDDVVFDEDGQPNF*
Ga0075468_1009496213300007229AqueousMTEELEQELRMLGVLDHKTPAVEIDAEPVWWVRDDVVFDEDGQPNF*
Ga0075468_1009804923300007229AqueousMMTEELEQELRMLGVLDHKTPAVEIDKEPIWIRDDVVFDEDGQPNF*
Ga0075468_1021447713300007229AqueousLEQELRMLGVLDHKTPAVEIDKEPIWIRDDVVFDEDGQPNF*
Ga0070747_112089113300007276AqueousMCEELKRELRMLGVLDYKIPTVENDTPPIWVRDDVTFDDEGEPNF*
Ga0070747_117187713300007276AqueousMTEELEQELRMLGVLDHKTPAVEIDKEPIWIRDDV
Ga0070747_119933623300007276AqueousELDKWRVIMTEELERELRMLGVLDQKTPAVEIDVEPIWIRDDVVFDEDGQPNF*
Ga0099847_108139423300007540AqueousMTEELEQELRMLGVLDHKTPAVEIDAEVEPMWIRDDVVFDEDGQPNF*
Ga0099847_113032413300007540AqueousMTEELERELRMLGVLDQKTPAVEIDVYPIWIRDDVVFDEDGQPNF*
Ga0099847_113242623300007540AqueousMMTEELEQELRMLGVLPQKTPAVEIDKEPMWVRDDVVFDEDGQPNF*
Ga0099847_120893213300007540AqueousELEQELRMLGVLDHKTPAVEIDKEPIWIRDDVVFDEDGQPNF*
Ga0099846_128034513300007542AqueousMTEELEQELRMLGVLDHKTPAVEIDAEPEPMWIRDDVVFDEDGQPHF*
Ga0102811_110986913300009024EstuarineMSEELEQELRMLGVLDHKTPAVEIDAEPMWIRDDVVLDEDGQPNF
Ga0102909_114268333300009050EstuarineSEELKRELRMLGVLDYKTPTVENDTPPIWVRDDVTFDDEGEPDF*
Ga0102905_107538023300009055EstuarineMSEELKRELRMLGVLDYKTPTVENDTPPIWVRDDVTFDDEGEPDF*
Ga0102814_1012760723300009079EstuarineMTEELEQELRMLGVLDHKTPAVEIDVEPMWIRDDVVFDEEGQPNF*
Ga0114915_102074583300009428Deep OceanMTEELERELRQMGVLDHKTPAVEIDVYPIWIRDDVVFDEDGQPNF*
Ga0115546_117005343300009435Pelagic MarineMTEELEQELRMLGVLDHKTPAVEIDAEPEPIWIRDDVVFDEDGQPNF*
Ga0115008_1043172913300009436MarineMSEELKKELRMLGVLDHKVPTVENDTAPIWVRDDVTFDDNGEPNF*
Ga0115556_118036713300009437Pelagic MarineMTEELEQELRMLGVLDHKTPAVEIDAEPIWIRDDVV
Ga0115558_142386213300009449Pelagic MarineVTMTEELKRELRMLGVLDQKTPAVEIDKEPMWVRDDVVFDEDGQPNF*
Ga0115571_109623233300009495Pelagic MarineVIMTEELEQELRMLGVLDHKTPAMEIDAEPEPMWIRDDVVFDEDGQPNF*
Ga0115571_111135433300009495Pelagic MarineMSEELKKELRMLGVLDYKTPTVENDTPPIWVRDDVTFDDEGEPNF*
Ga0129351_113404843300010300Freshwater To Marine Saline GradientMTEELERELRQMGVLDHKTPAVEIDKEPIWIRDDVVFDEDGQPNF*
Ga0136655_108048933300010316Freshwater To Marine Saline GradientMTEELEQELRMLGVLAHKTPAVEIDAEPIWIRDDVVFDEDGQPNF*
Ga0129324_1003642453300010368Freshwater To Marine Saline GradientMMTEELEQELRMLGVLDHKTPAVEIDAEPIWIRDDVVFDEDGEPHF*
Ga0129327_1043356613300013010Freshwater To Marine Saline GradientMELDKRRVIMTEELERELRMLGVLDQKTPVVENDKEPMWIRDDVVFDEDGQPNF*
Ga0180120_1014461523300017697Freshwater To Marine Saline GradientMTEELEQELRMLGVLPQKTPAVEIDKEPMWVRDDVVFDEDGQPNF
Ga0180120_1021798233300017697Freshwater To Marine Saline GradientMTEELEQELRMLGVLDHKTPAVEIDAEPVWWVRDDVVFDEDGQP
Ga0180120_1043389233300017697Freshwater To Marine Saline GradientMTEELEQELRMLGVLDHKTPAMEIDAEPIWIRDDVVFDEDGQPNF
Ga0181387_107442223300017709SeawaterMTEELERELRMLGVLDQKTPVVENDKEPMWIRDDVVFDEDGQPNF
Ga0181390_1000134463300017719SeawaterMSEELEQELRMLGVLDHKTPAVEIDKEPMWIRDDVVFDEDGQPNF
Ga0181428_100688723300017738SeawaterMTEELEQELRMLGVLDHKTPAVEIDEEPVWWVRDDVVFDEDGQPNF
Ga0188867_100252423300018642Freshwater LakeMTEELEQELRMLGVLDHKTPAVEIDAEPIWIRDDVVFDEDGQPNF
Ga0211504_113241733300020347MarineMMSEELEQELRMLGVLDHKTPAVEIDAEPMWIRDDVVF
Ga0211521_1009215113300020428MarineMSEELKKELRMLGVLDYKTPTVENDTPPIWVRDDVTFDDEGEPNF
Ga0213863_1011773933300021371SeawaterMTEELEQELRMLGVLDHKTPAVEIDKEPMWIRDDVVFDEDGQPNF
Ga0213869_1011239833300021375SeawaterMTEELEQELRMLGVLDHKTPAVEIDAEPMWIRDDVVFDEDGQPNF
Ga0213869_1014030663300021375SeawaterMTEELEQELRMLGVLDHKTPAVEIDAEPEPMWIRDDVVFDEDGQPNF
Ga0213869_1019279743300021375SeawaterMTEELEQELRMLGVLDHKTPAMEIDAEPEPMWIRDDVVFDEDGQPNF
Ga0213868_1010972263300021389SeawaterMNEELEQELRMLGVLDHKTPAVEIDAEPEPMWIRDDVVFDEDGQPNF
Ga0222717_10002734143300021957Estuarine WaterMTEELERELRMLGVLDQKTPVVENDVYPIWIRDDVVFDEDGQPNF
Ga0222717_1006827043300021957Estuarine WaterMSEELKRELRMLGVLDYKTPTVENNTPPIWVRDDVTFDDEGEPNF
Ga0222717_1020137223300021957Estuarine WaterMTEELEKELRMLGVLDHKTPAVEIDAEPEPMWIRDDVVFDEDGQPNF
Ga0212030_102799133300022053AqueousMTEELERELRMLGVLDQKTPAVEIDAEPIWIRDDVVFDEDGQPNF
Ga0212030_103202223300022053AqueousMTEELEQELRMLGVLDHKTPAVEIDAEPIWIRDDVVFDEDGEPHF
Ga0212023_100152443300022061AqueousMSEELKRELRMLGVLDYKTPTVENDTPPIWVRDDVTFDDEGEPNF
Ga0212023_103631923300022061AqueousMTEELEQELRMLGVLDHKTPAVEIDAEPMWVRDDVVFDEDGQPNF
Ga0196889_1000300183300022072AqueousMTEELERELRQMGVLDHKTPAVEIDKEPMWVRDDVVFDEDGQPNF
Ga0196889_101760333300022072AqueousMTEELEQELRMLGVLDHKTPAVEIDVEPIWIRDDVVFDEDGQPNF
Ga0196889_102285433300022072AqueousMMTEELEQELRMLGVLDHKTPAVEIDAEPMWIRDDVVFDEDGQPNF
Ga0196903_104246123300022169AqueousMTEELEQELRMLGVLDHKTPAVEIDAEVEPMWIRDDVVFDEDGQPNF
Ga0196887_101647023300022178AqueousMTEELERELRMLGVLDQKTPAVEIDVEPIWIRDDVVFDEDGQPNF
Ga0196887_102538243300022178AqueousMTEELEQELRMLGVLDHKTPAVEIDAEPVWWVRDDVVFDEDGQPNF
Ga0196887_113302113300022178AqueousMELDKWRVSMTEELERELRQMGVLDHKTPAVEIDKEPIWIRDDVVFDEDGQPNF
Ga0222711_100564173300022837Saline WaterMTEELERELRQMGVLDHKTPAVEIDVHPIWIRDDVVFDEGGQPNF
Ga0244777_1077903813300024343EstuarineMSEELKRELRMLGVLDYKTPTVENDTPPIWVRDDVTFDDEGEPDF
Ga0208667_100999663300025070MarineMTEELEQELRMLGVLDYKTPAVEIDAEPMWVRDDVVFDEDGQPNF
Ga0209535_100118043300025120MarineMTEELEKELRMLGVLDHKTPAVEIDKEPIWIRDDDMWEIDT
Ga0209634_1000698143300025138MarineMSEELKKELRMLGVLDHKVPTVENDTAPIWVRDDVTFDDNGEPNF
Ga0208814_1000184623300025276Deep OceanMSEELKKELRMLGVLDHKVPTVETETPPIWVRDDVTFDNNGEPNF
Ga0208814_100413373300025276Deep OceanMSEELKKELRMLGVLDHKVPTMENDTPPIWVRDDVTFDDNGEPNF
Ga0208303_1004969103300025543AqueousMTEELEQELRMLGVLDQKTPVVENDVYPIWIRDDVVFDEDGQPNF
Ga0208643_107332723300025645AqueousMTEELEQELRMLGVLDHKTPAVEIDKEPMWVRDDVVFDEDGQPNF
Ga0208134_103142533300025652AqueousMTEELEQELRMLGVLDHKTPAVEIDAEPMWVRDDVVFDEDGQPSF
Ga0208134_114275723300025652AqueousMTEELERELRQMGVLDHKTPAVEIDAEPIWIRDDVVFDEDGQPNF
Ga0208545_109478643300025806AqueousLEQELRMLGVLDHKTPAVEIDKEPIWIRDDVVFDEDGQPNF
Ga0209199_1011235113300025809Pelagic MarineMTEELEQELRMLGVLDHKTPVVENDVYPIWIRDDVVFDEDGQPNF
Ga0209193_108277113300025816Pelagic MarineMTEELEQELRMLGVLDHKTPAVEIDKEPIWIRDDVVFDE
Ga0209534_1018038713300025880Pelagic MarineTEELEQELRMLGVLDHKTPVVENDVYPIWIRDDVVFDEDGQPNF
Ga0208544_1007068713300025887AqueousELRMLGVLDHKTPAVEIDAEPMWIRDDVVFDEDGQPNF
Ga0209482_100031433300027668MarineMTEELERELRQMGVLDHKTPAVEIDVYPIWIRDDVVFDEDGQPNF
Ga0208304_1017814053300027751EstuarineMTEELEQELRMLGVLDHKTPAVEIDAEPMWIRDDVVFD
Ga0209092_1000044233300027833MarineMSEELKKELRMIGVLDHKVPTVENDTAPIWVRDDVTFDDNGEPNF
Ga0256368_102198133300028125Sea-Ice BrineMTEELERELRMLGVLDQKTPAVENDVYPIWIRDDVVFDEDGQPNF
Ga0256368_102485523300028125Sea-Ice BrineMGLDKWRVIMTEELERELRMLGVLDQKTPAVEIDAEPIWIRDDVVFDEDGQPNF
Ga0228648_104658413300028126SeawaterKNMSEELKRELRMLGVLDYKTPTVENNTPPIWVRDDVTFDDEGEPNF
Ga0307488_10033160103300031519Sackhole BrineMSEDLERELRMMGVLDHKTPAVEIDVEPIWIRDDVVFDEDGQPNF
Ga0307488_1005389883300031519Sackhole BrineMELDKWRVIMTEELERELRMLGVLDQKAPAVENDVYPIWIRDDVVFDEDGQPNF
Ga0307488_1043094813300031519Sackhole BrineMTEELERELRMLGVLDHKTPAVEIDAEPIWIRDDVVFDEDGQPNF
Ga0307488_1057450833300031519Sackhole BrineMTEELERELRQMGVLDHKTPAVEIDAEPIWIRDDVVFDED
Ga0307488_1066061923300031519Sackhole BrineMTEELERELRMLGVLDQKTPAVEIDVCPIWIRDDVVFDEDGQPNF
Ga0307999_112171713300031608MarineRRKTMSEELKRELRMLGVLDHKTPARETEPPPIWVRDNVTFDNNGNPNF
Ga0302114_1002552173300031621MarineMELDKWRVIMTEELKRELRMLGVLDQKTPAVENDVYPIWIRDDVVFDEDGQPNF
Ga0307984_105514153300031658MarineMTEELERELRQMGVLDHKTPAVDIDAEPIWIRDDVVFDEDGQPNF
Ga0307984_114427613300031658MarineMTEELKRELRMLGVLDQKTPAVDIDVYPIWIRDDVVFDEDGQPNF
Ga0314858_178224_302_4393300033742Sea-Ice BrineMSEELKKELRMLGVLDYKTPTRETETPPIWVRDDVTFDDNGEPNF


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