Basic Information | |
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Family ID | F070290 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 123 |
Average Sequence Length | 75 residues |
Representative Sequence | LQQGVRVRWIVYRGAGKVQFTPDIMSQRVYGKPATLETKVRFSAPGAYRLRAIASDGQTFSTYDVDVTVK |
Number of Associated Samples | 112 |
Number of Associated Scaffolds | 123 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 0.81 % |
% of genes near scaffold ends (potentially truncated) | 98.37 % |
% of genes from short scaffolds (< 2000 bps) | 95.93 % |
Associated GOLD sequencing projects | 106 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.76 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (94.309 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (13.008 % of family members) |
Environment Ontology (ENVO) | Unclassified (31.707 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (47.154 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 40.82% Coil/Unstructured: 59.18% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.76 |
Powered by PDBe Molstar |
SCOP family | SCOP domain | Representative PDB | TM-score |
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b.2.3.4: Fibrinogen-binding domain | d1n67a2 | 1n67 | 0.7171 |
b.1.5.1: Transglutaminase, two C-terminal domains | d1rlla4 | 1rll | 0.71597 |
f.6.1.0: automated matches | d4i0na_ | 4i0n | 0.71064 |
b.1.5.1: Transglutaminase, two C-terminal domains | d1f13a3 | 1f13 | 0.69924 |
b.1.5.1: Transglutaminase, two C-terminal domains | d1g0da3 | 1g0d | 0.6978 |
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Pfam ID | Name | % Frequency in 123 Family Scaffolds |
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PF00890 | FAD_binding_2 | 45.53 |
PF00557 | Peptidase_M24 | 7.32 |
PF13620 | CarboxypepD_reg | 3.25 |
PF13360 | PQQ_2 | 3.25 |
PF05195 | AMP_N | 2.44 |
PF13450 | NAD_binding_8 | 2.44 |
PF03309 | Pan_kinase | 1.63 |
PF01979 | Amidohydro_1 | 1.63 |
PF07969 | Amidohydro_3 | 1.63 |
PF04314 | PCuAC | 0.81 |
PF13185 | GAF_2 | 0.81 |
PF00083 | Sugar_tr | 0.81 |
PF13676 | TIR_2 | 0.81 |
PF01645 | Glu_synthase | 0.81 |
PF01494 | FAD_binding_3 | 0.81 |
PF00676 | E1_dh | 0.81 |
PF13565 | HTH_32 | 0.81 |
PF01738 | DLH | 0.81 |
PF16576 | HlyD_D23 | 0.81 |
PF00383 | dCMP_cyt_deam_1 | 0.81 |
PF12831 | FAD_oxidored | 0.81 |
COG ID | Name | Functional Category | % Frequency in 123 Family Scaffolds |
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COG0006 | Xaa-Pro aminopeptidase | Amino acid transport and metabolism [E] | 2.44 |
COG0654 | 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases | Energy production and conversion [C] | 1.63 |
COG1521 | Pantothenate kinase type III | Coenzyme transport and metabolism [H] | 1.63 |
COG0069 | Glutamate synthase domain 2 | Amino acid transport and metabolism [E] | 0.81 |
COG0567 | 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes | Energy production and conversion [C] | 0.81 |
COG0578 | Glycerol-3-phosphate dehydrogenase | Energy production and conversion [C] | 0.81 |
COG0644 | Dehydrogenase (flavoprotein) | Energy production and conversion [C] | 0.81 |
COG0665 | Glycine/D-amino acid oxidase (deaminating) | Amino acid transport and metabolism [E] | 0.81 |
COG1071 | TPP-dependent pyruvate or acetoin dehydrogenase subunit alpha | Energy production and conversion [C] | 0.81 |
COG1304 | FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase | Energy production and conversion [C] | 0.81 |
COG2847 | Copper(I)-binding protein | Inorganic ion transport and metabolism [P] | 0.81 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 95.12 % |
Unclassified | root | N/A | 4.88 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300000178|FW301_c1046557 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 556 | Open in IMG/M |
3300000364|INPhiseqgaiiFebDRAFT_105371675 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 583 | Open in IMG/M |
3300001977|JGI24746J21847_1056396 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 558 | Open in IMG/M |
3300002558|JGI25385J37094_10195308 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 542 | Open in IMG/M |
3300003996|Ga0055467_10249912 | Not Available | 559 | Open in IMG/M |
3300004463|Ga0063356_105652635 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 536 | Open in IMG/M |
3300004480|Ga0062592_102634946 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 508 | Open in IMG/M |
3300005181|Ga0066678_11083548 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 516 | Open in IMG/M |
3300005289|Ga0065704_10548512 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 636 | Open in IMG/M |
3300005333|Ga0070677_10529092 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 643 | Open in IMG/M |
3300005336|Ga0070680_101444649 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 596 | Open in IMG/M |
3300005337|Ga0070682_100574617 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 886 | Open in IMG/M |
3300005341|Ga0070691_10048088 | All Organisms → cellular organisms → Bacteria | 2029 | Open in IMG/M |
3300005365|Ga0070688_100331815 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1108 | Open in IMG/M |
3300005366|Ga0070659_101089986 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 704 | Open in IMG/M |
3300005440|Ga0070705_100643129 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 826 | Open in IMG/M |
3300005444|Ga0070694_100341185 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1158 | Open in IMG/M |
3300005444|Ga0070694_100847110 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 752 | Open in IMG/M |
3300005456|Ga0070678_101964237 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 553 | Open in IMG/M |
3300005546|Ga0070696_100464954 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1000 | Open in IMG/M |
3300005549|Ga0070704_100727931 | All Organisms → cellular organisms → Bacteria | 882 | Open in IMG/M |
3300005558|Ga0066698_10417175 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 920 | Open in IMG/M |
3300005558|Ga0066698_10452669 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 876 | Open in IMG/M |
3300005558|Ga0066698_10952981 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 547 | Open in IMG/M |
3300005574|Ga0066694_10312833 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 747 | Open in IMG/M |
3300005713|Ga0066905_101650707 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 588 | Open in IMG/M |
3300005834|Ga0068851_10394364 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 813 | Open in IMG/M |
3300005843|Ga0068860_100108459 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 2654 | Open in IMG/M |
3300006196|Ga0075422_10027471 | All Organisms → cellular organisms → Bacteria | 1965 | Open in IMG/M |
3300006358|Ga0068871_100503788 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1092 | Open in IMG/M |
3300006796|Ga0066665_11472203 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 530 | Open in IMG/M |
3300006844|Ga0075428_102095096 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 585 | Open in IMG/M |
3300006845|Ga0075421_102555914 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 531 | Open in IMG/M |
3300006852|Ga0075433_11455990 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 592 | Open in IMG/M |
3300006853|Ga0075420_100181397 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1842 | Open in IMG/M |
3300006894|Ga0079215_10518303 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 750 | Open in IMG/M |
3300006894|Ga0079215_11012261 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 612 | Open in IMG/M |
3300006903|Ga0075426_10286319 | All Organisms → cellular organisms → Bacteria | 1204 | Open in IMG/M |
3300006904|Ga0075424_101722664 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 663 | Open in IMG/M |
3300006969|Ga0075419_10433530 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 905 | Open in IMG/M |
3300009090|Ga0099827_10609330 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 942 | Open in IMG/M |
3300009100|Ga0075418_11236405 | Not Available | 809 | Open in IMG/M |
3300009100|Ga0075418_12142591 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 609 | Open in IMG/M |
3300009147|Ga0114129_10658349 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1351 | Open in IMG/M |
3300009147|Ga0114129_11977966 | All Organisms → cellular organisms → Bacteria | 705 | Open in IMG/M |
3300009148|Ga0105243_10747575 | Not Available | 958 | Open in IMG/M |
3300009162|Ga0075423_10583359 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1178 | Open in IMG/M |
3300009162|Ga0075423_11126907 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 836 | Open in IMG/M |
3300009176|Ga0105242_13244434 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 505 | Open in IMG/M |
3300009553|Ga0105249_13245226 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 523 | Open in IMG/M |
3300009799|Ga0105075_1025822 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 645 | Open in IMG/M |
3300009822|Ga0105066_1041292 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 956 | Open in IMG/M |
3300010140|Ga0127456_1227057 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1220 | Open in IMG/M |
3300010301|Ga0134070_10066249 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1229 | Open in IMG/M |
3300010301|Ga0134070_10311794 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 602 | Open in IMG/M |
3300010360|Ga0126372_10704853 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 986 | Open in IMG/M |
3300010366|Ga0126379_12811330 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 582 | Open in IMG/M |
3300010373|Ga0134128_11702086 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora acidiphila → Catenulispora acidiphila DSM 44928 | 694 | Open in IMG/M |
3300010401|Ga0134121_11930885 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 621 | Open in IMG/M |
3300011421|Ga0137462_1160960 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 552 | Open in IMG/M |
3300011445|Ga0137427_10093486 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1211 | Open in IMG/M |
3300011445|Ga0137427_10145069 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 974 | Open in IMG/M |
3300012040|Ga0137461_1045499 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1184 | Open in IMG/M |
3300012166|Ga0137350_1110895 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 556 | Open in IMG/M |
3300012200|Ga0137382_10934520 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 624 | Open in IMG/M |
3300012349|Ga0137387_11097822 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 567 | Open in IMG/M |
3300012362|Ga0137361_11964438 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 501 | Open in IMG/M |
3300012390|Ga0134054_1254473 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 509 | Open in IMG/M |
3300012895|Ga0157309_10066965 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 927 | Open in IMG/M |
3300012944|Ga0137410_10176744 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1642 | Open in IMG/M |
3300012948|Ga0126375_11606590 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 560 | Open in IMG/M |
3300014326|Ga0157380_10799040 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 960 | Open in IMG/M |
3300014873|Ga0180066_1024215 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1130 | Open in IMG/M |
3300014879|Ga0180062_1136739 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 563 | Open in IMG/M |
3300015359|Ga0134085_10488542 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 562 | Open in IMG/M |
3300015359|Ga0134085_10584130 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 518 | Open in IMG/M |
3300015372|Ga0132256_101011733 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 946 | Open in IMG/M |
3300015374|Ga0132255_105638435 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 530 | Open in IMG/M |
3300017659|Ga0134083_10118148 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1056 | Open in IMG/M |
3300018052|Ga0184638_1079351 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1203 | Open in IMG/M |
3300018079|Ga0184627_10418119 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 698 | Open in IMG/M |
3300018081|Ga0184625_10412535 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 695 | Open in IMG/M |
3300018084|Ga0184629_10612138 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 555 | Open in IMG/M |
3300018429|Ga0190272_11228867 | All Organisms → cellular organisms → Bacteria | 739 | Open in IMG/M |
3300018431|Ga0066655_10159792 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1349 | Open in IMG/M |
3300018431|Ga0066655_10607339 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 737 | Open in IMG/M |
3300018468|Ga0066662_10759677 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 935 | Open in IMG/M |
3300018482|Ga0066669_10515651 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1037 | Open in IMG/M |
3300019232|Ga0180114_1356633 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 532 | Open in IMG/M |
3300019238|Ga0180112_1272968 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 743 | Open in IMG/M |
3300020003|Ga0193739_1155055 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 545 | Open in IMG/M |
3300020193|Ga0194131_10025498 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales | 5252 | Open in IMG/M |
3300022756|Ga0222622_10064040 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2136 | Open in IMG/M |
3300024241|Ga0233392_1015582 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 752 | Open in IMG/M |
3300025160|Ga0209109_10395824 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 644 | Open in IMG/M |
3300025893|Ga0207682_10466620 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 598 | Open in IMG/M |
3300025910|Ga0207684_10160638 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1935 | Open in IMG/M |
3300025922|Ga0207646_11392646 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 610 | Open in IMG/M |
3300025926|Ga0207659_10077454 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes | 2447 | Open in IMG/M |
3300025934|Ga0207686_11710026 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 520 | Open in IMG/M |
3300025937|Ga0207669_10567495 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 918 | Open in IMG/M |
3300025960|Ga0207651_10440478 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1116 | Open in IMG/M |
3300025972|Ga0207668_10428390 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1124 | Open in IMG/M |
3300025986|Ga0207658_10319281 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1344 | Open in IMG/M |
3300026116|Ga0207674_11640612 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 611 | Open in IMG/M |
3300026334|Ga0209377_1315675 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 522 | Open in IMG/M |
3300026527|Ga0209059_1207386 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 661 | Open in IMG/M |
3300026536|Ga0209058_1286407 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 567 | Open in IMG/M |
3300026540|Ga0209376_1208172 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 882 | Open in IMG/M |
3300027835|Ga0209515_10348828 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 810 | Open in IMG/M |
3300027873|Ga0209814_10117352 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1134 | Open in IMG/M |
3300027880|Ga0209481_10564270 | Not Available | 589 | Open in IMG/M |
3300027882|Ga0209590_10117369 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1613 | Open in IMG/M |
3300028381|Ga0268264_11192069 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 771 | Open in IMG/M |
(restricted) 3300031197|Ga0255310_10048837 | All Organisms → cellular organisms → Bacteria | 1105 | Open in IMG/M |
3300031421|Ga0308194_10253353 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 591 | Open in IMG/M |
3300031740|Ga0307468_101010853 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 732 | Open in IMG/M |
3300031901|Ga0307406_10306568 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1222 | Open in IMG/M |
3300032001|Ga0306922_11946780 | All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotalea → Candidatus Nitrosotalea okcheonensis | 574 | Open in IMG/M |
3300032012|Ga0310902_10451028 | Not Available | 829 | Open in IMG/M |
3300032122|Ga0310895_10291873 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 768 | Open in IMG/M |
3300033417|Ga0214471_10298388 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1311 | Open in IMG/M |
3300034176|Ga0364931_0048460 | Not Available | 1286 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 13.01% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 8.94% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 6.50% |
Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 5.69% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 5.69% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 4.88% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 4.06% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 3.25% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 3.25% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 3.25% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 2.44% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.44% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 2.44% |
Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 1.63% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.63% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 1.63% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 1.63% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 1.63% |
Groundwater Sand | Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand | 1.63% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 1.63% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.63% |
Freshwater Lake | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake | 0.81% |
Groundwater | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater | 0.81% |
Groundwater | Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater | 0.81% |
Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 0.81% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.81% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.81% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.81% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.81% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 0.81% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil | 0.81% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 0.81% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.81% |
Sandy Soil | Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil | 0.81% |
Deep Subsurface Sediment | Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment | 0.81% |
Sediment | Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment | 0.81% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.81% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.81% |
Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 0.81% |
Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.81% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 0.81% |
Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 0.81% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 0.81% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.81% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.81% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 0.81% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.81% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
3300000178 | Pristine groundwater from Oak Ridge Integrated Field Research Center, Tennessee (resequenced) | Environmental | Open in IMG/M |
3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300001977 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 | Host-Associated | Open in IMG/M |
3300002558 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm | Environmental | Open in IMG/M |
3300003996 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 | Environmental | Open in IMG/M |
3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
3300004480 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4 | Environmental | Open in IMG/M |
3300005181 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 | Environmental | Open in IMG/M |
3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 | Host-Associated | Open in IMG/M |
3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Host-Associated | Open in IMG/M |
3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Environmental | Open in IMG/M |
3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Environmental | Open in IMG/M |
3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Environmental | Open in IMG/M |
3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Host-Associated | Open in IMG/M |
3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Environmental | Open in IMG/M |
3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Environmental | Open in IMG/M |
3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Host-Associated | Open in IMG/M |
3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Environmental | Open in IMG/M |
3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Environmental | Open in IMG/M |
3300005558 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 | Environmental | Open in IMG/M |
3300005574 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 | Environmental | Open in IMG/M |
3300005713 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2) | Environmental | Open in IMG/M |
3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Host-Associated | Open in IMG/M |
3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Host-Associated | Open in IMG/M |
3300006196 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 | Host-Associated | Open in IMG/M |
3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Host-Associated | Open in IMG/M |
3300006796 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 | Environmental | Open in IMG/M |
3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
3300006852 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Host-Associated | Open in IMG/M |
3300006853 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4 | Host-Associated | Open in IMG/M |
3300006894 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control | Environmental | Open in IMG/M |
3300006903 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5 | Host-Associated | Open in IMG/M |
3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
3300006969 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 | Host-Associated | Open in IMG/M |
3300009090 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG | Environmental | Open in IMG/M |
3300009100 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2 | Host-Associated | Open in IMG/M |
3300009147 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) | Host-Associated | Open in IMG/M |
3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Host-Associated | Open in IMG/M |
3300009162 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2 | Host-Associated | Open in IMG/M |
3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
3300009799 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30 | Environmental | Open in IMG/M |
3300009822 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 | Environmental | Open in IMG/M |
3300010140 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300010301 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015 | Environmental | Open in IMG/M |
3300010360 | Tropical forest soil microbial communities from Panama - MetaG Plot_6 | Environmental | Open in IMG/M |
3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
3300010373 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4 | Environmental | Open in IMG/M |
3300010401 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1 | Environmental | Open in IMG/M |
3300011421 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT769_2 | Environmental | Open in IMG/M |
3300011445 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2 | Environmental | Open in IMG/M |
3300012040 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2 | Environmental | Open in IMG/M |
3300012166 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT660_2 | Environmental | Open in IMG/M |
3300012200 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG | Environmental | Open in IMG/M |
3300012349 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG | Environmental | Open in IMG/M |
3300012362 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG | Environmental | Open in IMG/M |
3300012390 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300012895 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2 | Environmental | Open in IMG/M |
3300012944 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012948 | Tropical forest soil microbial communities from Panama - MetaG Plot_14 | Environmental | Open in IMG/M |
3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
3300014873 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D | Environmental | Open in IMG/M |
3300014879 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_10D | Environmental | Open in IMG/M |
3300015359 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015 | Environmental | Open in IMG/M |
3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300017659 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG | Environmental | Open in IMG/M |
3300018052 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2 | Environmental | Open in IMG/M |
3300018079 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1 | Environmental | Open in IMG/M |
3300018081 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1 | Environmental | Open in IMG/M |
3300018084 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1 | Environmental | Open in IMG/M |
3300018429 | Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T | Environmental | Open in IMG/M |
3300018431 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104 | Environmental | Open in IMG/M |
3300018468 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111 | Environmental | Open in IMG/M |
3300018482 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118 | Environmental | Open in IMG/M |
3300019232 | Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT530_16_1Ra (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300019238 | Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT466_16_1Ra (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300020003 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2 | Environmental | Open in IMG/M |
3300020193 | Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015053 Kigoma Offshore 120m | Environmental | Open in IMG/M |
3300022756 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1 | Environmental | Open in IMG/M |
3300024241 | Subsurface microbial communities from Mancos shale, Colorado, United States - Mancos A_50_July_PB | Environmental | Open in IMG/M |
3300025160 | Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2 | Environmental | Open in IMG/M |
3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026334 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes) | Environmental | Open in IMG/M |
3300026527 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes) | Environmental | Open in IMG/M |
3300026536 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes) | Environmental | Open in IMG/M |
3300026540 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes) | Environmental | Open in IMG/M |
3300027835 | Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes) | Environmental | Open in IMG/M |
3300027873 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes) | Host-Associated | Open in IMG/M |
3300027880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes) | Host-Associated | Open in IMG/M |
3300027882 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes) | Environmental | Open in IMG/M |
3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300031197 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1 | Environmental | Open in IMG/M |
3300031421 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Host-Associated | Open in IMG/M |
3300032001 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2) | Environmental | Open in IMG/M |
3300032012 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3 | Environmental | Open in IMG/M |
3300032122 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4 | Environmental | Open in IMG/M |
3300033417 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155 | Environmental | Open in IMG/M |
3300034176 | Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
FW301_10465572 | 3300000178 | Groundwater | GKIQQGVRIRWIVYRGVGKVRFDPDIMAGRVQGKPATLPTKVSFTAPGAYRLRAIASDGQAFSTYDVDVTVK* |
INPhiseqgaiiFebDRAFT_1053716752 | 3300000364 | Soil | QQGVRVRWIVYRGXGKVQFTPDIXXQRVYGKPATLDTKVRFSSPGAYRLRAIASDGQTFSTYDVDVTVK* |
JGI24746J21847_10563962 | 3300001977 | Corn, Switchgrass And Miscanthus Rhizosphere | HPKPIPDPTGKLQQGVRVRWIVYRGAGKVQLMPDIMSQRVYGKPATLDSQVRFSAPGAYRLRAIASDGQTFSTYDVDVTVK* |
JGI25385J37094_101953081 | 3300002558 | Grasslands Soil | DALTLTATAXDDGRPKPVPDPAGRLQQGVRLRWIVLRGAGKVRFDPDIMSQRMYGKPATLQTKVSFAAPGAYRLRAIASDGQAFSTYDVDITVK* |
Ga0055467_102499122 | 3300003996 | Natural And Restored Wetlands | RWIVYRGTGKVRFEPDIMPGRVYGKPATLASRVNFAAPGAYRLRAIASDGQAFSTRDVDIIVK* |
Ga0063356_1056526351 | 3300004463 | Arabidopsis Thaliana Rhizosphere | PISDPAGQLQQGVRVRWIVYRGTGKVQFTPDIMSQRVFGKPATLDTKVRFSAPGAYRLRAIASDGQTFSTFDVDVTVK* |
Ga0062592_1026349461 | 3300004480 | Soil | ATDDGRPKAVPDPEGRLQQGVRLRWIVYRGAGQVRIDPDIMSGRVHGKPATLEAKVRFAAPGTYRLRAIASDGQAFSTRDVDVTVK* |
Ga0066678_110835482 | 3300005181 | Soil | DDGHPKPIPDPTGHLQQGVRVRWIVYRGAGKVQFAPDIMSQRVYGKPATLDTKVRFSAPGAYKLRAIASDGQTFSTYDVDVTVR* |
Ga0065704_105485123 | 3300005289 | Switchgrass Rhizosphere | PDPAGRLQQGVRLRWIVVRGTGKVRFDPDIMSQRVYGKPATLETKVSFAAPGAYRLRAIASDGQAFSTYDVDITVK* |
Ga0070677_105290922 | 3300005333 | Miscanthus Rhizosphere | VTANDDGHPKPIPDPTGKLQQGVRVRWIVYRGAGKVQLMPDMMSQRVFGKPATLDTKARFSAPGAYRLRAIASDGQTFSTYDVDVTVK* |
Ga0070680_1014446492 | 3300005336 | Corn Rhizosphere | QQGVRVRWIVYRGAGKVQLMPDIMSQRVYGKPATLDSQVRFSAPGAYRLRAIASDGQTFSTYDVDVTVK* |
Ga0070682_1005746171 | 3300005337 | Corn Rhizosphere | VRWIVYRGTGKVQFTPDIMRQRVYGKPATLDTKVRFSAPGAYRLRAIASDGQTFSTFDVDVTVK* |
Ga0070691_100480881 | 3300005341 | Corn, Switchgrass And Miscanthus Rhizosphere | VRWIVYRGAGKVQFTPDIMSGRVYGKPATLDTKVRFSAPGVYKLRAIASDGQTFSTYDVDVTVR* |
Ga0070688_1003318152 | 3300005365 | Switchgrass Rhizosphere | DPTGKLQQGVRVRWIVYRGAGKVQLMPDIMSQRVYGKPATLDSQVRFSAPGAYRLRAIASDGQTFSTYDVDVTVK* |
Ga0070659_1010899862 | 3300005366 | Corn Rhizosphere | ASDDGHPKPIPDPTGQLQQGVRVRWIVYRGTGKVQFTPDIMSQRVYGKPATLDTKVRFSAPGAYRLRAIASDGQTFSTFDVDVTVK* |
Ga0070705_1006431292 | 3300005440 | Corn, Switchgrass And Miscanthus Rhizosphere | IPDPTGQLQQGVRVRWIVYRGTGKVQFTPDIMSQRVYGKPATLDTKVRFSAPGAYRLRAIASDGQTFSTFDVDVTVK* |
Ga0070694_1003411851 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | TLTVSATATDDGRPKAVPDPEGRIQQGVRVRWIVFRGAGQVRIAPDIMSGRVHGKPATLEAKVRFSAPGAYRLRAIASDGQAFSTRDVDVTVK* |
Ga0070694_1008471101 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | GRLQQGVRVRWIVYRGAGKVRFDPDIMSQRIYGKPATLETKVRFAVPGAYRLRAIASDGQTFSTYDVDVTVK* |
Ga0070678_1019642371 | 3300005456 | Miscanthus Rhizosphere | PDPTGQLQQGVRVRWIVYRGTGKVQFTPDIMSQRVYGKPATLDTKVRFSAPGAYRLRAIASDGQTFSTFDVDVTVK* |
Ga0070696_1004649542 | 3300005546 | Corn, Switchgrass And Miscanthus Rhizosphere | VYRGAGKVQFTPDIMTQRVYGKPATLDTKVRFSAPGAYKLRAIASDGQTFSTYDVDVTVR |
Ga0070704_1007279311 | 3300005549 | Corn, Switchgrass And Miscanthus Rhizosphere | RVRWLLYRGAGKVRIDPDIMSQRLYGKPATLETKVRFAVPGAYRLRAIASDGQAFSTYDVDVTVK* |
Ga0066698_104171752 | 3300005558 | Soil | VRLRWIVLRGTGKVRFDPDILSQRVYGKPATLQTKVSFAAPGAYRLRAIASDGQAFSTYDVDITVK* |
Ga0066698_104526692 | 3300005558 | Soil | GRQEGVRFRWMLYRGAGRVRFEPETSGPIPTNPATSQTKVTFSTPGAYRLRAIASDGQAFSTFDVDVTVK* |
Ga0066698_109529811 | 3300005558 | Soil | KPITASGRQQGVRIRWIVYRGSGKVRFEPDIMSERVYGKPVAMQTKVTFSTPGNYRLRAIGSDGQLAGTFDVDVKVNPRN* |
Ga0066694_103128331 | 3300005574 | Soil | VRLRWIVLRGTGKVRFDPDIMSQRVYGKPATLQTKVNFAAPGAYRLRAIASDGQAFSTYDVDITVK* |
Ga0066905_1016507072 | 3300005713 | Tropical Forest Soil | LQQGVRVRWIVYRGAGQVQLTPDIMSQRIYGKPATLDTKVRFSAPGAYRLRAIASDGQTFSTYDVDVTVK* |
Ga0068851_103943642 | 3300005834 | Corn Rhizosphere | GQLQQGVRVRWIVYRGTGKVQFTPDIMSQRVYGKPATLDTKVRFSAPGAYRLRAIASDGQTFSTFDVDVTVK* |
Ga0068860_1001084594 | 3300005843 | Switchgrass Rhizosphere | DDGHPKPIPDPTGQLQQGVRVRWIVYRGTGKVQFTPDIMSQRVFGKPATLDTKVRFSAPGAYRLRAIASDGQTFSTFDVDVTVK* |
Ga0075422_100274713 | 3300006196 | Populus Rhizosphere | PDPTGKLQQGVRVRWIVYRGAGKVQLMPDMMSQRVFGKPATLDTKARFSAPGAYRLRAIASDGQTFSTYDVDVTVK* |
Ga0068871_1005037881 | 3300006358 | Miscanthus Rhizosphere | KPIPDPTGQLQQGVRVRWIVYRGTGKVQFTPDIMSQRVYGKPATLDTKVRFSAPGAYRLRAIASDGQTFSTFDVDVTVK* |
Ga0066665_114722031 | 3300006796 | Soil | TATDDGLPKPLPDPAGRRQQGVRIRWIVYRAPGRVRFDPDIMSNRVYGKPATFDSKATFSRAGAYRLRAIASDGQLFSTYDVDVTVLP* |
Ga0075428_1020950961 | 3300006844 | Populus Rhizosphere | TDDGRPKPVPDPAGRLQQGVRVRWLLYRGAGKVRIDPDIMSQRLYGKPATLETKVRFAVPGAYRLRAIASDGQAFSTYDVDVTVK* |
Ga0075421_1025559142 | 3300006845 | Populus Rhizosphere | HLQQGVRVRWIVYRGTGKVQFAPDIMGQRVYGKPATLDTKVRFSSPGAYRLRAIASDGQTFSTYDVDVTVK* |
Ga0075433_114559902 | 3300006852 | Populus Rhizosphere | RVRWIVYRGAGKVQFTPDIMSQRVYGKPASLDTKVRFSAPGAYRLRAIASDGQTFSTYDVDVTVK* |
Ga0075420_1001813971 | 3300006853 | Populus Rhizosphere | QQGVRLRWIVFRGAGQVRIDPDIMSGRVHGKPATLEARVRFSAPGAYRLRAIASDGQAFSTRDVDVTVK* |
Ga0079215_105183031 | 3300006894 | Agricultural Soil | PEGRLQQGVRVRWVVYRGAGKVRIEPDIMSGRVHGKPAALEAKVRFAAPGVYRLRAIASDGQAFSTRDVDVTVK* |
Ga0079215_110122612 | 3300006894 | Agricultural Soil | VRWILYRGAGKVTFTPDIMPGRVYGKPATLATKVNFSSPGAYRLRAIASDGQAFSTSDVNITVK* |
Ga0075426_102863191 | 3300006903 | Populus Rhizosphere | QQGVRLRWIVYRGVGKVQFTPDITSQRVFGKPATLDTKVRFSAPGAYRLRAIASDGQTFATYDVDVTVK* |
Ga0075424_1017226641 | 3300006904 | Populus Rhizosphere | HPKPIPDPTGHLQQGVRMRWIVYRGAGKVQFAPDIMTQRVYGKPATLDTKVRFSAPGAYKLRAIASDGQTFSTYDVDVTVR* |
Ga0075419_104335302 | 3300006969 | Populus Rhizosphere | YRGAGKVQLMPDMMSQRVFGKPATLDTKARFSAPGAYRLRAIASDGQTFSTYDVDVTVK* |
Ga0099827_106093302 | 3300009090 | Vadose Zone Soil | VRLRWIVLRGTGKVRFDPDILSQRVYGKPATLQTKVSFAAPGAYRLRAIASDGQAFSTYDVDI |
Ga0075418_112364051 | 3300009100 | Populus Rhizosphere | PVPDPDNQLQQGVRVRWIVYRGVGKVRFEPDIMPGRVYGKPATLAARVNFAGPGAYRLRAIASDGQAFSTHDVDIVVK* |
Ga0075418_121425911 | 3300009100 | Populus Rhizosphere | QGVRVRWIVYRGGGKVQFTPDTMSQRVFGKPATLDTKVRFSAPGAYRLRAIASDGQTFSTYDVDVTVK* |
Ga0114129_106583491 | 3300009147 | Populus Rhizosphere | TLSLRVTANDDGHPKPMPDPTGKLQQGVRVRWIVYRGAGKVQLMPDMMSQRVFGKPATLDTKARFSAPGAYRLRAIASDGQTFSTYDVDVTVK* |
Ga0114129_119779661 | 3300009147 | Populus Rhizosphere | QGVRVRWLLYRGAGKVRIDPDIMSQRLYGKPATLETKVRFAVPGAYRLRAVASDGQAFSTYDVDVTVK* |
Ga0105243_107475752 | 3300009148 | Miscanthus Rhizosphere | GVRVRWIVYRGAGKVRFDPDIMSQRLYGKPATLETKVRFAVPGAYRLRAIASDGQTFSTYDVDVTVK* |
Ga0075423_105833592 | 3300009162 | Populus Rhizosphere | TGHLQQGVRIRWIVYRGTGKVQFTPDIMSQRVYGKPATLDTKVRFASPGAYRLRAIASDGQTFSTYDVDVTVK* |
Ga0075423_111269072 | 3300009162 | Populus Rhizosphere | QQGVRIRWIVYRGSGKVRFDPDIMSERNYGKPATLETKVSFGAPGNYRLRAIASDGQITATYDVDVTVNPN* |
Ga0105242_132444341 | 3300009176 | Miscanthus Rhizosphere | NDDGHPKPIPDPTGKLQQGVRVRWIVYRGAGQVQFTPDTMSQRVFGKPASLDTKVRFSAPGAYRLRAIASDGQTFSTYDVDVTVK* |
Ga0105249_132452261 | 3300009553 | Switchgrass Rhizosphere | ATDDGRPQPVADPEGQLQQGVRVRWIVYRGTGKVRFEPDIMAGRVYGKPATLASRVNFAAPGAYRLRAIASDGQAFSTRDVDIIVK* |
Ga0105075_10258221 | 3300009799 | Groundwater Sand | QGVRVRWLLYRGAGKVRIDPDIMSQRLYGKPATLETKVRFTVPGAYRLRAIASDGQAFSTYDVDVTVK* |
Ga0105066_10412921 | 3300009822 | Groundwater Sand | DDGRPKPVPDPTGRLQQGVRMRWIVYRGAGRVRIEPDIMSQRLYGKPATLETKVSFAVPGAYRLRAIASDGQAFSTYDVDVAVK* |
Ga0127456_12270571 | 3300010140 | Grasslands Soil | RGSGKVRFDPDIMSERVYGKPVTMQTKVTFSTPGNYRLRAIASDGQLAGAFDVDVTVSPRN* |
Ga0134070_100662492 | 3300010301 | Grasslands Soil | VTATDDDRPKPITAPGRQQGVRIRWIVHRGSGKVRFDPDIMSERVYGKPVTMQTKVTFSTPGNYRLRAVASDGQLAGAFDVDVTVSPRN* |
Ga0134070_103117942 | 3300010301 | Grasslands Soil | GRQEGVRFRWMLYRGTGRVRFEPETSGPIPTNPATSQTKVTFSTPGAYRLRAIASDGQAFSTFDVDVTVK* |
Ga0126372_107048532 | 3300010360 | Tropical Forest Soil | YRGTGKVQFTPDILNQRVYGKPATLDTKVRFSSPGAYRLRAIASDGQTFSTYDVDVTVK* |
Ga0126379_128113301 | 3300010366 | Tropical Forest Soil | TVTATDDGRPKPLSESANRRAQGVRIRWIVYRGAGKVRFDPEIMPERVYGKPATLETKVSFSAAGMYRIRAIASDGQITSTHDVDVTVNPN* |
Ga0134128_117020862 | 3300010373 | Terrestrial Soil | VTANDDGHPKPIPDPTGRLQQGVRVRWIVYRGAGKVQFAPDIMSQRVFGKPATLDTKVRFSAAGPYRLRAIASDGQTFSTYDVDVTVK* |
Ga0134121_119308851 | 3300010401 | Terrestrial Soil | DDGHPKPIPDPTGQLQQGVRVRWIVYRGTGKVQFTPDIMRQRVYGKPATLDTKVRFSAPGAYRLRAIASDGQTFSTFDVDVTVK* |
Ga0137462_11609601 | 3300011421 | Soil | PVPDPAGRLQQGVRVRWILYRGAGKVRIDPDIMSQRLYGKPATLETKVRFAVPGAYRLRAIASDGQAFSTYDVDVAVK* |
Ga0137427_100934862 | 3300011445 | Soil | GRLQQGVRVRWIVYRGAGKVRFDPDIMSQRLYGKPATLETKVRFAVPGPYRLRAIASDGQTFSTYDVDVTVK* |
Ga0137427_101450692 | 3300011445 | Soil | TDDGRPKPIPDPTGRLQQGVRVRWIVYRGAGKVRFDPDIMSQRVYGKPATLETKVRFTSPGAYRLRAIASDGQTFSTYDVDVTVK* |
Ga0137461_10454992 | 3300012040 | Soil | EGRLQQGVRLRWIVYRGAGKVRLDPDIMSGRVYGKPATLATKVRFAAPGAYRLRAIASDGQAFSTYDVDVTVK* |
Ga0137350_11108951 | 3300012166 | Soil | RPKLLPDPAGRLQQGVRVRWILYRGAGKVRFDPDIMSQRLYGIPATLEAKVRFAAPGAYRLRAIASDGQAFSTYDVDVTVK* |
Ga0137382_109345203 | 3300012200 | Vadose Zone Soil | KPISAPGRQQGFRIRWIAYRGSGKVRFDPDIMSERVYGKPVTMQTKVTFSTPGNYRLRAIASDGQLAGAFDVDVTVSPRN* |
Ga0137387_110978222 | 3300012349 | Vadose Zone Soil | MYRGPGKVRFDPDIMSQRVYGKPATLETKVSFAVPGTYRLRAIANDGQLFSTYDVDVTVRR* |
Ga0137361_119644382 | 3300012362 | Vadose Zone Soil | PGRQQGVRIRWIVHRGSGKVRFDPDIMSERVYGKPVTMQTKVTFSTPGNYRLRAVASDGQLAGAFDVDVTVSPRN* |
Ga0134054_12544732 | 3300012390 | Grasslands Soil | TLTVTATDDDRPKPITAPGRQQGVRIRWIVHRGSGKVRFDPDIMSERVYGKPVTMQTKVTFSTPGNYRLRAIASDGQLAGAFDVDVTVSPRN* |
Ga0157309_100669651 | 3300012895 | Soil | DGRPKPVPDPAGRLQQGVRVRWLLYRGAGKVRIEPDIMSQRLYGKPATLETKVRFAAPGAYRLRAIASDGQAFSTYDVDVTVK* |
Ga0137410_101767442 | 3300012944 | Vadose Zone Soil | DDGRPKPVPDPAGRLQQGVRLRWIVLRGAGKVRFDPDIMSQRMYGKPATLQTKVSFAAPGAYRLRAIASDGQAFSTYDVDITVK* |
Ga0126375_116065902 | 3300012948 | Tropical Forest Soil | WIVYRGAGKVQFTPDIMSQRVYGKPAALETKVRFSAPGAYRLRAIASDGQTFSTYDVDVTVK* |
Ga0157380_107990401 | 3300014326 | Switchgrass Rhizosphere | TLTLTATATDDGRPKPIPDPDGRLQQGVRVRWIVYRGAGKVRFDPDIMSQRLYGKPATLETRVSFAVPGAYRLRAIASDGQTFSTYDVDVTVK* |
Ga0180066_10242151 | 3300014873 | Soil | PAGRLQQGVRVRWVLYRGAGKVLLDPDIMSQRLYGKPATLETKVRFAVPGAYRLRAIASDGQAFSTYDVDVTVK* |
Ga0180062_11367391 | 3300014879 | Soil | LTVSATATDDGRPKPVPDPEGRLQQGVRLRWIVYRGAGQVRIDPDIMSGRIHGKPATLEAKVRFTAPGAYRLRAIASDGQAFSTRDVDVTVK* |
Ga0134085_104885422 | 3300015359 | Grasslands Soil | GGRQEGVRFRWMLYRGAGRVRFEPETNGPIATNPATSQTKVTFSTPGAYRLRAIASDGQAFSTFDVDVTVK* |
Ga0134085_105841301 | 3300015359 | Grasslands Soil | RLQQGVRVRWIVYRGAGKVQFTPDIMSQRAYGKPATLETKVRFAAPGAYRLRAIASDGQTFSTYDVDVTVK* |
Ga0132256_1010117331 | 3300015372 | Arabidopsis Rhizosphere | VTANDDGHPKPIPDPTGHLQQGVRIRWIVYRGTGKVQFTPDIMSQRVYGKPATLDTKVRFASPGAYRLRAIASDGQTFSTYDVDVTVK* |
Ga0132255_1056384352 | 3300015374 | Arabidopsis Rhizosphere | LQQGVRVRWIVYRGAGKVQFTPDIMSQRVYGKPATLETKVRFSAPGAYRLRAIASDGQTFSTYDVDVTVK* |
Ga0134083_101181482 | 3300017659 | Grasslands Soil | RWIVYRGSGKVRFDPDIMSERVYGKPVTMQTKVTFSTPGNYRLRAVASDGQLAGAFDVEVTVSPRN |
Ga0184638_10793513 | 3300018052 | Groundwater Sediment | GWLLYRGAGRVRIDPDIMSKRLYGKPATLEKKVRFAVPGAYRLRAIASDGQAFSTYDVDVTVK |
Ga0184627_104181191 | 3300018079 | Groundwater Sediment | RVRWIVYRGAGKVRFDSDIMSQRLYGKPATLETKVRFDVPGAYRLRAIASDGQAFST |
Ga0184625_104125351 | 3300018081 | Groundwater Sediment | KPIPDPTGRLQQGVRLRWIVYRGVGKVQFTPDIMSQRVFGKPATLDTKVRFSAPGAYRLRAIASDGQTFSTYDVDVTVK |
Ga0184629_106121382 | 3300018084 | Groundwater Sediment | PVPDPEGRLQQGVLLRWIVYRGAGKVRFDPDIMSGRVHGKPATLATKVSFAAPGAYRLRAIASDGQAFSTYDVDVTVK |
Ga0190272_112288671 | 3300018429 | Soil | PQPVPDPAGRLQQGVRVRWILYRGAGKVRIDPDIMSQRLYGKPATLETKVRFAVPGAYRLRAIASDGQAFSTYDVDVTVK |
Ga0066655_101597921 | 3300018431 | Grasslands Soil | IRWIVYRGSGRVRFEPDIMSERSYGKPVTMQTKVTFGAPGNYRLRALASDGQLAGPFDVDVTVNPRN |
Ga0066655_106073391 | 3300018431 | Grasslands Soil | RPKPVPDPAGRLQQGVRLRWIVLRGTGKVRFDPDIMSQRVYGKPATLQTKVSFAAPGAYRSRAMWSDGQAF |
Ga0066662_107596771 | 3300018468 | Grasslands Soil | GVRIRWIVYRGSGRVRFKPDIMSERSYGKPVTMQTKVTFGAPGNYRLRALASDGQLAGPFDVDVTVNPRN |
Ga0066669_105156512 | 3300018482 | Grasslands Soil | VYRGSGKVRFDPDIMSERVYGKPVTMQTRVTFSTPGNYRLRAIASDGQLAGAFDVDVTVSPRN |
Ga0180114_13566331 | 3300019232 | Groundwater Sediment | LTLTVTATDDGRPQPVPDPAGRLQQGVRVRWILYRGAGKVRIDPDIMSQRLYGKPATLETKVRFAVPGAYRLRAIASDGQAFSTYDVDVAVK |
Ga0180112_12729682 | 3300019238 | Groundwater Sediment | LMLSATATDDGRPKPVPDPTGRLQQGVRVRWILYRGAGKVQLQPDIMSQRLYGKPATLETKVSFASPGAYRFRAIASDGQAFSTYDVDVTVK |
Ga0193739_11550551 | 3300020003 | Soil | SDTLTLTATAADDGRPKPVPDPDGRLQQGVRLRWIVYRGAGKVRFDPDIMTGRVYGKPATLATKVSFAVPGAYQLRAIASDGQAFSTYDVDVTVK |
Ga0194131_100254985 | 3300020193 | Freshwater Lake | SLTATAADDGKPMPIPDPDGKLQQGVRVRWIVYRGAGLVRMQPDIMPNRVHGRPAALETSVTFTRPGTYRLRAIASDGMAFSTHDVDVTVQ |
Ga0222622_100640403 | 3300022756 | Groundwater Sediment | RWIVYRGVGKVQFTPDIMNQRVYGKPATLETKARFAAPGAYRLRAIASDGQTFSTYDVDVTVK |
Ga0233392_10155821 | 3300024241 | Deep Subsurface Sediment | GVRLRWLVYRGTGKVRFDPDIMSGRVYGQPATLATKVRFAAPGAYRLRAIASDGQAFSTYDVDVTVK |
Ga0209109_103958242 | 3300025160 | Soil | QFRKKRGTGVCLVMFLVPDPTGRLQQGVRLRWIVYRGAGKVRLDPDIMSGRVHGQPATLATRVSFAAPGAYRLRAIASDGQAFSTYDVDVTVK |
Ga0207682_104666202 | 3300025893 | Miscanthus Rhizosphere | TGKLQQGVRVRWIVYRGAGKVQLMPDMMSQRVFGKPATLDTKARFSAPGAYRLRAIASDGQTFSTYDVDVTVK |
Ga0207684_101606384 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | IVYRGAGKVQFTPDIMTQRVYGKPATLDTKVRFSAPGAYKLRAIASDGQTFSTYDVDVTV |
Ga0207646_113926462 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | PKPIPDPTGHLQQGVRMRWIVYRGAGKVQFAPDIMSQRVYGKPATLDTKVRFSAPGAYKLRAIASDGQTFSTYDVDVTVK |
Ga0207659_100774541 | 3300025926 | Miscanthus Rhizosphere | IPDPTGRLQQGVRVRWIVYRGAGKVQFAPDIMSQRVFGKPATLDTKVRFSAAGPYRLRAIASDGQTFSTYDVDVTVK |
Ga0207686_117100261 | 3300025934 | Miscanthus Rhizosphere | DPGGHLQQGVRVRWIVYRGAGKVQFTPDIMSGRVYGKPATLDTKVRFSAPGVYKLRAIASDGQTFSTYDVDVTVR |
Ga0207669_105674952 | 3300025937 | Miscanthus Rhizosphere | HPKPIPDPTGKLQQGVRVRWIVYRGAGKVQFTPEMMGQRVYGKPATLDTKVRFSAPGAYRLRAIASDGQTFSTYDVDITVK |
Ga0207651_104404782 | 3300025960 | Switchgrass Rhizosphere | QQGVRVRWIVYRGAGKVRFTPDILNQRVYGKPATLDTKVRFTAPGAYRLRAIASDGQTFSTYDVDVTVK |
Ga0207668_104283903 | 3300025972 | Switchgrass Rhizosphere | YRSDPKPIPDPTGKLQQGVRVRWIVYRGAGKVQLMPDMMSQRVFGKPATLDTKARFSAPGAYRLRAIASDGQTFSTYDVDVTVK |
Ga0207658_103192811 | 3300025986 | Switchgrass Rhizosphere | DPTGQLQQGVRVRWIVYRGTGKVQFTPDIMSQRVYGKPATLDTKVRFSAPGAYRLRAIASDGQTFSTFDVDVTVK |
Ga0207674_116406121 | 3300026116 | Corn Rhizosphere | KPIPDPTGQLQQGVRVRWIVYRGRGKVQFTPDIMSQRVYGKPATLETKVRFSTAGAYRLRAIASDGQTFSTFDVDVTVK |
Ga0209377_13156751 | 3300026334 | Soil | QGVRIRWIVYRGSWKVRFDPDIMSERVYGKPVTMQTKVTFSTPGNYRLRAIASDGQLTGAFDVDVTVSPRN |
Ga0209059_12073861 | 3300026527 | Soil | LALRVTANDDGHPKPIPDPTGHLQQGVRVRWIVYRGAGKVQFTPDIMNQRVYGKPATLDTKVRFSAPGAYRLRAIASDGQTFSTYDVDVTVK |
Ga0209058_12864072 | 3300026536 | Soil | GRQQGVRIRWIVYRGSGKVRFEPDIMSERVYGKPVAMQTKVTFSTPGNYRLRAIGSDGQLAGTFDVDVKVNPRN |
Ga0209376_12081722 | 3300026540 | Soil | TATDDGRPKPVPDPAGRLQQGVRLRWIVLRGTGKVRFDPDIMSQRVYGKPATLQTKVSFAAPGAYRLRAIASDGQAFSTYDVDITVK |
Ga0209515_103488282 | 3300027835 | Groundwater | RIQQGVRVRWIVYRGAGRVKFDPDIMSQRVYGKPATLPTKVNFTSPGAYRLRAIASDGQAFSTYDVDVTVK |
Ga0209814_101173522 | 3300027873 | Populus Rhizosphere | RWIVYRGTGKVQFAPDIMGQRVYGKPATLDTKVRFSSPGAYRLRAIASDGQTFSTYDVDVTVK |
Ga0209481_105642702 | 3300027880 | Populus Rhizosphere | DPEGQLQQGVRMRWIVYRGTGKVRFEPDIMTGRVYGKPATLASRVNFAAPGAYRLRAIASDGQAFSTHDVDVVVK |
Ga0209590_101173691 | 3300027882 | Vadose Zone Soil | IVYRGAGKVQFTPDIMSQRVYGKPATLDTKVRFSAPGAYRLRAIASDGQTFSTYDVDVTV |
Ga0268264_111920692 | 3300028381 | Switchgrass Rhizosphere | PKPIPDPTGHLQQGVRVRWIVYRGAGKVQFTPDILNQRVYGKPAMLDTKVRFTAPGAYRLRAIASDGQTFSTYDVDVTVK |
(restricted) Ga0255310_100488372 | 3300031197 | Sandy Soil | RWLLYRGAGKVRIEPDIMGQRLYGKPATLETKVRFAVPGAYRLRAIASDGQAFSTYDVDVTVK |
Ga0308194_102533532 | 3300031421 | Soil | VPDPARRLQQGVRLRWIVLRGTGKVRFDPDIMSQRVYGKPATLQTKVSFAAPGAYRLRAIASDGQAFSTYDVDITVK |
Ga0307468_1010108532 | 3300031740 | Hardwood Forest Soil | VYRGAGKVRLEPDIMSQRVFGKPATLETKVRFSAPGPYRLRAIASDGQTFSTYDVDVTVK |
Ga0307406_103065682 | 3300031901 | Rhizosphere | DPTGRLQQGVRVRWILYRGAGGVRIDPDIMAGRVHGKPATLEAKVRFVTPGAYRLRAIASDGQAFSTRDVDVTVK |
Ga0306922_119467802 | 3300032001 | Soil | QGVRIRWIVYRGTGKVRFDPDIMDQRVYGKPATLETKVSFGAPGAYRLRAIASDGQLTSAYDVDVTVKQN |
Ga0310902_104510282 | 3300032012 | Soil | VYRGTGKVRFGPDIMAGRVYGKPATLASRVNFAAPGAYRLRAIASDGQAFSTHDVDIIVK |
Ga0310895_102918732 | 3300032122 | Soil | LSVTANDDGHPKPIPDPSGQLQQGVRVRWIVYRGTGKVQFTPDIMSRRVYGKPATLDTKVRFSTPGAYRLRAIASDGQTFSTYDVDVTVK |
Ga0214471_102983881 | 3300033417 | Soil | DSTGRLQQGVRLRWIVYRGAGKVRFDPDIMSGRVYGKPATLATKVSFTAAGAYRLRAIASDGQAFSTYDVDVTVR |
Ga0364931_0048460_38_220 | 3300034176 | Sediment | VYRGAGKVRFDPDIMNQRLYGKPATLETKVRFAVPGPYRLRAIASDGQTFSTYDVDVTVK |
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