Metagenome Family F070258

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F070258
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	61 residues
Representative Sequence	MSLRQVIGLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFLAWKFLVRPRR
Number of Associated Samples	90
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	89.43 %
% of genes near scaffold ends (potentially truncated)	19.51 %
% of genes from short scaffolds (< 2000 bps)	86.18 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (56.098 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere (17.073 % of family members)
Environment Ontology (ENVO)	Unclassified (78.862 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (87.805 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 54.55% β-sheet: 0.00% Coil/Unstructured: 45.45%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF00977	His_biosynth	48.78
PF02195	ParBc	12.20
PF08535	KorB	5.69
PF13932	GIDA_C	3.25
PF00117	GATase	3.25
PF06421	LepA_C	2.44
PF01656	CbiA	1.63
PF13614	AAA_31	0.81
PF13360	PQQ_2	0.81
PF02527	GidB	0.81
PF01713	Smr	0.81
PF00561	Abhydrolase_1	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	Cell cycle control, cell division, chromosome partitioning [D]	5.69
COG0481	Translation elongation factor EF-4, membrane-bound GTPase	Translation, ribosomal structure and biogenesis [J]	2.44
COG0357	16S rRNA G527 N7-methylase RsmG (former glucose-inhibited division protein B)	Translation, ribosomal structure and biogenesis [J]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.16 %
Unclassified	root	N/A	39.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.16 %
Unclassified	root	N/A	39.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.10 %
Unclassified	root	N/A	39.84 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	4.07 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	52.03 %
Unclassified	root	N/A	39.84 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	4.07 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	48.78 %
Unclassified	root	N/A	39.84 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	4.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.84 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.13 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	4.07 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.84 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	4.07 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.63 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.81 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.84 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	4.07 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.63 %
unclassified Rhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → unclassified Rhizobiaceae	0.81 %
Rhizobiales bacterium NRL2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium NRL2	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.84 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	4.07 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.63 %
Rhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → unclassified Rhizobiaceae → Rhizobiaceae bacterium	0.81 %
Rhizobiales bacterium NRL2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium NRL2	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.84 %
Symbiodinium microadriaticum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	4.07 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.63 %
Rhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → unclassified Rhizobiaceae → Rhizobiaceae bacterium	0.81 %
Rhizobiales bacterium NRL2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium NRL2	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.81 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105117989	Not Available	744	Open in IMG/M
3300004114\|Ga0062593_100452338	Not Available	1171	Open in IMG/M
3300005327\|Ga0070658_11808109	Not Available	528	Open in IMG/M
3300005327\|Ga0070658_11842454	Not Available	523	Open in IMG/M
3300005329\|Ga0070683_100105170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2661	Open in IMG/M
3300005330\|Ga0070690_100143126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1624	Open in IMG/M
3300005331\|Ga0070670_101191194	Not Available	696	Open in IMG/M
3300005331\|Ga0070670_102031851	Not Available	530	Open in IMG/M
3300005335\|Ga0070666_10442698	Not Available	938	Open in IMG/M
3300005335\|Ga0070666_11154045	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300005335\|Ga0070666_11211094	Not Available	563	Open in IMG/M
3300005337\|Ga0070682_101258084	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	627	Open in IMG/M
3300005340\|Ga0070689_100248896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1466	Open in IMG/M
3300005439\|Ga0070711_101789771	Not Available	539	Open in IMG/M
3300005459\|Ga0068867_100913574	Not Available	791	Open in IMG/M
3300005466\|Ga0070685_10167859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1404	Open in IMG/M
3300005466\|Ga0070685_10338051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1026	Open in IMG/M
3300005511\|Ga0077121_10159883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1894	Open in IMG/M
3300005535\|Ga0070684_100709842	Not Available	938	Open in IMG/M
3300005539\|Ga0068853_100260942	All Organisms → cellular organisms → Bacteria → Proteobacteria	1593	Open in IMG/M
3300005543\|Ga0070672_101832422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	546	Open in IMG/M
3300005548\|Ga0070665_101308535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	735	Open in IMG/M
3300005548\|Ga0070665_102651648	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300005577\|Ga0068857_100943732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	829	Open in IMG/M
3300005614\|Ga0068856_100032512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5107	Open in IMG/M
3300005615\|Ga0070702_101481580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300005617\|Ga0068859_100516127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1290	Open in IMG/M
3300005618\|Ga0068864_102224442	Not Available	555	Open in IMG/M
3300005718\|Ga0068866_10115708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1503	Open in IMG/M
3300005834\|Ga0068851_11038907	Not Available	518	Open in IMG/M
3300005841\|Ga0068863_100944769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	863	Open in IMG/M
3300005842\|Ga0068858_100352656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1409	Open in IMG/M
3300005842\|Ga0068858_100673849	Not Available	1005	Open in IMG/M
3300005843\|Ga0068860_102176507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	575	Open in IMG/M
3300006237\|Ga0097621_100000645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24626	Open in IMG/M
3300006237\|Ga0097621_100537721	All Organisms → cellular organisms → Bacteria → Proteobacteria	1062	Open in IMG/M
3300006237\|Ga0097621_100868272	Not Available	839	Open in IMG/M
3300006237\|Ga0097621_101231338	Not Available	706	Open in IMG/M
3300006358\|Ga0068871_100063730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3015	Open in IMG/M
3300006358\|Ga0068871_100083248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2653	Open in IMG/M
3300006358\|Ga0068871_100418972	All Organisms → cellular organisms → Bacteria → Proteobacteria	1195	Open in IMG/M
3300009092\|Ga0105250_10390479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	615	Open in IMG/M
3300009093\|Ga0105240_10077628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4091	Open in IMG/M
3300009093\|Ga0105240_10439059	Not Available	1463	Open in IMG/M
3300009093\|Ga0105240_11941147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	612	Open in IMG/M
3300009148\|Ga0105243_10966744	Not Available	852	Open in IMG/M
3300009174\|Ga0105241_10065367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2810	Open in IMG/M
3300009174\|Ga0105241_10257464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1482	Open in IMG/M
3300009174\|Ga0105241_11898272	Not Available	584	Open in IMG/M
3300009174\|Ga0105241_12113390	Not Available	557	Open in IMG/M
3300009176\|Ga0105242_10611146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1054	Open in IMG/M
3300009177\|Ga0105248_12764134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → unclassified Rhizobiaceae → Rhizobiaceae bacterium	560	Open in IMG/M
3300009545\|Ga0105237_10250670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1772	Open in IMG/M
3300009545\|Ga0105237_12093997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	575	Open in IMG/M
3300009545\|Ga0105237_12703836	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	507	Open in IMG/M
3300009551\|Ga0105238_10084018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3173	Open in IMG/M
3300009551\|Ga0105238_10715915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1013	Open in IMG/M
3300009553\|Ga0105249_10521518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1236	Open in IMG/M
3300010357\|Ga0116249_11639027	Not Available	569	Open in IMG/M
3300010371\|Ga0134125_12889513	Not Available	522	Open in IMG/M
3300010375\|Ga0105239_10938600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	994	Open in IMG/M
3300010397\|Ga0134124_11974074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	620	Open in IMG/M
3300010401\|Ga0134121_11831873	Not Available	634	Open in IMG/M
3300011119\|Ga0105246_10182958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1615	Open in IMG/M
3300011119\|Ga0105246_12387006	Not Available	518	Open in IMG/M
3300012924\|Ga0137413_11202838	Not Available	604	Open in IMG/M
3300012944\|Ga0137410_11630022	Not Available	566	Open in IMG/M
3300013102\|Ga0157371_11584475	Not Available	512	Open in IMG/M
3300013104\|Ga0157370_10457250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1173	Open in IMG/M
3300013297\|Ga0157378_10235685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1746	Open in IMG/M
3300013297\|Ga0157378_10465757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1257	Open in IMG/M
3300013297\|Ga0157378_10762566	Not Available	991	Open in IMG/M
3300013306\|Ga0163162_11876108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	686	Open in IMG/M
3300013306\|Ga0163162_12097505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648	Open in IMG/M
3300013307\|Ga0157372_11428128	Not Available	798	Open in IMG/M
3300013308\|Ga0157375_10811402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1084	Open in IMG/M
3300014325\|Ga0163163_10269225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1755	Open in IMG/M
3300014969\|Ga0157376_12302242	Not Available	578	Open in IMG/M
3300015371\|Ga0132258_11691595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1596	Open in IMG/M
3300015374\|Ga0132255_102094283	Not Available	862	Open in IMG/M
3300015374\|Ga0132255_104944362	Not Available	564	Open in IMG/M
3300018476\|Ga0190274_11716481	Not Available	722	Open in IMG/M
3300020060\|Ga0193717_1027716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2266	Open in IMG/M
3300024055\|Ga0247794_10276462	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	560	Open in IMG/M
3300025893\|Ga0207682_10132976	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300025903\|Ga0207680_10101203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1852	Open in IMG/M
3300025903\|Ga0207680_10120894	Not Available	1712	Open in IMG/M
3300025907\|Ga0207645_10165363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1448	Open in IMG/M
3300025911\|Ga0207654_10025193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3206	Open in IMG/M
3300025911\|Ga0207654_11238225	Not Available	544	Open in IMG/M
3300025913\|Ga0207695_10088933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3107	Open in IMG/M
3300025913\|Ga0207695_10213285	All Organisms → cellular organisms → Bacteria	1840	Open in IMG/M
3300025913\|Ga0207695_10301091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1495	Open in IMG/M
3300025914\|Ga0207671_10356780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1160	Open in IMG/M
3300025914\|Ga0207671_11174044	Not Available	601	Open in IMG/M
3300025924\|Ga0207694_10450638	Not Available	1074	Open in IMG/M
3300025925\|Ga0207650_10778279	Not Available	810	Open in IMG/M
3300025931\|Ga0207644_10474411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1030	Open in IMG/M
3300025934\|Ga0207686_11102232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	647	Open in IMG/M
3300025935\|Ga0207709_10105428	All Organisms → cellular organisms → Bacteria → Proteobacteria	1873	Open in IMG/M
3300025938\|Ga0207704_10034315	Not Available	2894	Open in IMG/M
3300025940\|Ga0207691_10325599	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300025940\|Ga0207691_11403553	Not Available	574	Open in IMG/M
3300025941\|Ga0207711_10316764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1441	Open in IMG/M
3300025944\|Ga0207661_11410895	Not Available	639	Open in IMG/M
3300025945\|Ga0207679_10390520	Not Available	1222	Open in IMG/M
3300025961\|Ga0207712_10012522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5420	Open in IMG/M
3300025981\|Ga0207640_11655990	Not Available	577	Open in IMG/M
3300026035\|Ga0207703_12330323	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	511	Open in IMG/M
3300026078\|Ga0207702_11535507	Not Available	659	Open in IMG/M
3300026088\|Ga0207641_10513207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium NRL2	1165	Open in IMG/M
3300026089\|Ga0207648_10061815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3265	Open in IMG/M
3300028379\|Ga0268266_10107437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2468	Open in IMG/M
3300028379\|Ga0268266_10155275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2066	Open in IMG/M
3300028380\|Ga0268265_10757536	Not Available	943	Open in IMG/M
3300028381\|Ga0268264_10526182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1157	Open in IMG/M
3300031366\|Ga0307506_10110413	Not Available	915	Open in IMG/M
3300031456\|Ga0307513_10981136	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	554	Open in IMG/M
3300031456\|Ga0307513_11014088	Not Available	540	Open in IMG/M
3300031730\|Ga0307516_10043599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4444	Open in IMG/M
3300031938\|Ga0308175_101314049	Not Available	806	Open in IMG/M
3300033412\|Ga0310810_10329092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1622	Open in IMG/M
3300034965\|Ga0370497_0027382	Not Available	1190	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	79.67%
Environmental	Environmental	19.51%
Engineered	Engineered	0.81%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	79.67%
Terrestrial	Environmental → Terrestrial	19.51%
Wastewater	Engineered → Wastewater	0.81%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	49.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	21.14%
Soil	Environmental → Terrestrial → Soil	19.51%
Roots	Host-Associated → Plants → Roots	8.94%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	32.52%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	18.70%
Soil	Host-Associated → Plants → Rhizosphere → Soil	17.07%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	10.57%
Loam	Environmental → Terrestrial → Soil → Loam	8.13%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	6.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.44%
Unclassified	Host-Associated → Plants → Roots → Unclassified	2.44%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.81%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	32.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	18.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	17.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.32%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	6.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.44%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	2.44%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.81%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	17.07%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	10.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	8.13%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	5.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.06%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.06%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.25%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.25%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.25%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.25%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.44%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.44%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	2.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.44%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.81%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.81%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.81%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005511	Combined assembly of arab plate scrape MF_Col (Combined Assembly)	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010357	AD_USSTca	Engineered	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031456	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM	Host-Associated	Open in IMG/M
3300031730	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034965	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_04D_17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1051179891	3300000364	Soil	VIGLLLMAACIAGLLAFNLHPPEGDDSNLLNKAVVTAVLGGGAFLAWKFLVRTRPANRD*
Ga0062593_1004523382	3300004114	Soil	VKTRQVIGFLLVVICTVGLVAWNVRPPEGDDTNLLNRSVVTLVLGSGAFLAWKLLVRTRPTGRD*
Ga0070658_118081091	3300005327	Corn Rhizosphere	MTARRLIGLVLMAVCLAALLAYNIHPPEGEDTNLLVRSVATAITGGAAYLAWRFLVRTRR
Ga0070658_118424541	3300005327	Corn Rhizosphere	MTARRVIGVLLMTTCLAALLAYNIHPPEGEDTNLLVRSVATAVTGGGAYLAWRFLVRKT*
Ga0070683_1001051704	3300005329	Corn Rhizosphere	MSLRQVIGLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTVVLGGGAFLAWKFLVRPRPANRD*
Ga0070690_1001431261	3300005330	Switchgrass Rhizosphere	MSLRQVIGLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTVVLGGGAFLAWKFLVRKPPANRA*
Ga0070670_1011911941	3300005331	Switchgrass Rhizosphere	MSLRQVIGLLLMAICIAGLLAFNINPPEGDDSNLLNKAVVTAVLGGGAFLAWRFLVRMRSADPV*
Ga0070670_1020318512	3300005331	Switchgrass Rhizosphere	MKVRPAIGLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFLAWKFLVRTRRA*
Ga0070666_104426981	3300005335	Switchgrass Rhizosphere	MSLRLVIGVLLMAICIAGLLAFNIHPPEGEDSNLLNKAVVTAVLGGGAFLAWRFLVRGRPADPV*
Ga0070666_111540452	3300005335	Switchgrass Rhizosphere	MSLRQVIGLLLMAICIAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFLAWRFLVQRRPADPV*
Ga0070666_112110941	3300005335	Switchgrass Rhizosphere	MKARQAISLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFAAWKFLVRRA*
Ga0070682_1012580842	3300005337	Corn Rhizosphere	MKARQVIGLLLMVVCVAGLLAFNIHPPEGDDSNLLNKAVVTVVLGGGAFLAWKFLVRPRPANRD*
Ga0070689_1002488963	3300005340	Switchgrass Rhizosphere	MSLRQVIGLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTVVLGGGAFLAWKFLVRTRRA*
Ga0070711_1017897712	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRQVTGVLLMVICIAGLLAFNIHPPEGEDSNLLNKLVVTAVLGGGAFLAWKFLVRRA*
Ga0068867_1009135741	3300005459	Miscanthus Rhizosphere	MQPRQVIGSLLMVICIAGLLAFNIHPPEGGDSNLLNKAVVTLVLGGAAFLAWRFLVRSRPVNRD*
Ga0070685_101678592	3300005466	Switchgrass Rhizosphere	MSLRQVIGLLLMVFCIAGLLAFNIHPPEGDDSNLLNKAVVTVVLGGGAFLAWKFLVRPRPANRD*
Ga0070685_103380512	3300005466	Switchgrass Rhizosphere	MKARQVIGTLLMAACIAGLLAFNIHPPEGEDSNLLNKAVVTAVLGGGAFLAWKFLVRTRRA*
Ga0077121_101598832	3300005511	Arabidopsis Rhizosphere	MMARRAIGLLLMAICIAGLLAFNIHPPEGDDSNLLNKLVVTAVLGGGAFAAWKFLVRTRRA*
Ga0070684_1007098421	3300005535	Corn Rhizosphere	MTARRAIGLLLMAACIAGLLAFNIHPPEGQDSNLLNKAVVTAVLGGGAFLAWKFLVRTRRA*
Ga0068853_1002609422	3300005539	Corn Rhizosphere	LLMAICIVGLVAWNVSPPEGNDTNLLNRSVVTLMLGSGAFLAWKFLVRKRPANRV*
Ga0070672_1018324222	3300005543	Miscanthus Rhizosphere	MKARQAIGLLLMVICVAGLLAFNIHPPEGDDSNLLNKFVVTAVLGAGSFLAWKFLVRPRPANRD*
Ga0070665_1013085352	3300005548	Switchgrass Rhizosphere	MKARQVIGSLLMVVCIAGLLAFNIHPPEGDDSNLLNKAVVTIVLGGGAFLAWKFLVRPRRT*
Ga0070665_1026516482	3300005548	Switchgrass Rhizosphere	MSLRQVIGLLLMAICIAGLLAFNIHPPEGEDSNLLNKAVVTAVLGGGAFLAWRFLVQRRPADPV*
Ga0068857_1009437322	3300005577	Corn Rhizosphere	MSLRQVIGLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFLAWKFLVRPRRT*
Ga0068856_1000325123	3300005614	Corn Rhizosphere	MKARQVIGSLLMVVCIAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFLAWKFLVRPRRT*
Ga0070702_1014815802	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MKARQAIGLLLMVICVAGLLAFNIHPPEGDDSNLLNKLVVTAVLGAGSFLAWKFLVRARPANRD*
Ga0068859_1005161272	3300005617	Switchgrass Rhizosphere	MSLRLVIGVLLMAICIAGLLAFNIHPPEGEDSNLLNKAVVTAVLGGGAFLAWRFLVQRRPADPV*
Ga0068864_1022244421	3300005618	Switchgrass Rhizosphere	MKARQVIGSLLMVICIAGLLAFNIHPPEGDDSNLFNKLVVTTVLGGGAFLAWKYLVRTRRA*
Ga0068866_101157083	3300005718	Miscanthus Rhizosphere	MQPRQVIGSLLMVICIAGLLAFNIHPPEGGDSNLLNKAVVTLVLGGAAFLAWKFLVRPRPANRD*
Ga0068851_110389072	3300005834	Corn Rhizosphere	MSLRQVIGLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFAAWKFLVRRA*
Ga0068863_1009447692	3300005841	Switchgrass Rhizosphere	MKARQAIGLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFAAWKFLVRRA*
Ga0068858_1003526562	3300005842	Switchgrass Rhizosphere	MSLRLVIGVLLMAICIAGLLAFNIHPPEGEDSNLLNKAVVTAVLGGGAFLAWRFLVRRRPADPV*
Ga0068858_1006738492	3300005842	Switchgrass Rhizosphere	MSLRQVIGLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTVVLGGGAFLAWKFL
Ga0068860_1021765072	3300005843	Switchgrass Rhizosphere	MKVRPAIGLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFLAWKFLVRGT*
Ga0097621_1000006454	3300006237	Miscanthus Rhizosphere	MKLRQVIGLVLMAACIAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFLAWKFLVRTRPANGD*
Ga0097621_1005377211	3300006237	Miscanthus Rhizosphere	RPAIGLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFAAWKFLVRTRRA*
Ga0097621_1008682722	3300006237	Miscanthus Rhizosphere	MAACIAGLLAYNIHPPEGEDTNLLVRAVASLILGGGAVLAWRFLVRRRPAGPV*
Ga0097621_1012313382	3300006237	Miscanthus Rhizosphere	MSLRQVIGFLLMAICIAGLLAFNIHPPEGDDSNLLNKAVVTVVLGGGAFLAWKFLVRKPPANRA*
Ga0068871_1000637302	3300006358	Miscanthus Rhizosphere	MSLRQVIGFLLMAICIAGLLAFNIHPPEGDDSNLLNKAVVTVVLGGAAFLAWKFLVRPRTVNRD*
Ga0068871_1000832481	3300006358	Miscanthus Rhizosphere	MRQAIGLLLMAACMAGLLAYNIHPPEGEDTNLLVRAVASLILGGGAVLAWRFLVRRRPAGPV*
Ga0068871_1004189722	3300006358	Miscanthus Rhizosphere	MKVRPAIGLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFAAWKFLVRTRRA*
Ga0105250_103904792	3300009092	Switchgrass Rhizosphere	MSLRLVIGVLLMAICIAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFLAWRFLVRMRPADPV*
Ga0105240_100776282	3300009093	Corn Rhizosphere	MKARQVIGLLLMVVCVAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFLAWKFLVRPRRT*
Ga0105240_104390592	3300009093	Corn Rhizosphere	MKVRRIIGFLLVVICIVGLVAWNVSPPEGGDTNLLNRSLVTLVLGGGAYLAWKFLVRAA*
Ga0105240_119411472	3300009093	Corn Rhizosphere	MKARRIIGFLLVVICIVGLVAWNVSPPEGHDTNLLNRSVVTLVLGGGAFAAWKFLVRGA*
Ga0105243_109667442	3300009148	Miscanthus Rhizosphere	MKARQAIGLLLMAACIAGLLAFNLHPPEGDDSNLLNKAVVTAVLGGGAFLAWKFLVRTRPANRD*
Ga0105241_100653673	3300009174	Corn Rhizosphere	MKARPAIGLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFAAWKFLVRGT*
Ga0105241_102574643	3300009174	Corn Rhizosphere	MKARQAIGLLLMVICVAGLLAFNIHPPEGDDSNLLNKLVVTAVLGAGSFLAWKFLVRA
Ga0105241_118982722	3300009174	Corn Rhizosphere	VKTRQVIGFLLVVICTVGLVALNVRPPEGDDTNLLNRSVVTLVLGSGAFLAWKLLVRTRPTGRD*
Ga0105241_121133901	3300009174	Corn Rhizosphere	MKVRRIIGFLLVVICIVGLVAWNVSPPEGDDTNLLNRSVVTLVLGGGAYLAWKFLVRGA*
Ga0105242_106111462	3300009176	Miscanthus Rhizosphere	MRQAIGLLLMAVCIAGLIAYNIHPPEGEDTNLLVRSVASLILGGAAFLAWRFLVRTRPS*
Ga0105248_127641342	3300009177	Switchgrass Rhizosphere	MSLRQVIGLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTVVLGGAAFLAWKFLVRPRPANRD*
Ga0105237_102506703	3300009545	Corn Rhizosphere	MSLRLVIGVLLMAICIAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFLAWRFLVRRRPADPV*
Ga0105237_120939972	3300009545	Corn Rhizosphere	MTARRATGLLLMAACIVGLLAFNIHPPEGEDSNLLNKAVVTAVLGGGAFLAWKFLVRRA*
Ga0105237_127038362	3300009545	Corn Rhizosphere	RRIIGFLLVVICIVGLVAWNVSPPEGDDTNLLNRSVVTLVLGGGAYLAWKFLVRAA*
Ga0105238_100840184	3300009551	Corn Rhizosphere	MKARPAIGLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFLAWKFLVRTRRA*
Ga0105238_107159152	3300009551	Corn Rhizosphere	MKARQVIGSLLMVVCIAGLLAFNIHPPEGDDSNLLNKAVVTVVLGGGAFLAWKFLVRPRRT*
Ga0105249_105215182	3300009553	Switchgrass Rhizosphere	MSLRQVIGLLLMAICIAGLLAFNIRPPEGDDSNLLNKAVVTAVLGGGAFAAWKFLVRRA*
Ga0116249_116390272	3300010357	Anaerobic Digestor Sludge	MTVRQVVGLLLMTACIASLLAFDIYPPEGDDSNLLNKAVVTAVLGSGAYLAWRFLVRPRPADKV*
Ga0134125_128895132	3300010371	Terrestrial Soil	MKVRPAIGLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFAAWKFLVRGT*
Ga0105239_109386002	3300010375	Corn Rhizosphere	MTARRATGLLLMAACIVGLLAFNIHPPEGEDSNLLNKAVVTAVLGGGAFMAWKFLVRRA*
Ga0134124_119740742	3300010397	Terrestrial Soil	MRARQAIGLLLMVICIAGLLAFNIHPPEGDDSNLFNKLVVTTVLGGGAFLAWKYLVRTRRA*
Ga0134121_118318732	3300010401	Terrestrial Soil	LMAACIAGLLAYNIHPPEGEDTNLLVRAVASLILGGGAVLAWRFLVRRRPAGPV*
Ga0105246_101829583	3300011119	Miscanthus Rhizosphere	MKARPAIGLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFAAWKFLVRTRRA*
Ga0105246_123870061	3300011119	Miscanthus Rhizosphere	MSLRLVIGALLMAICIAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFAAWKFLV
Ga0137413_112028382	3300012924	Vadose Zone Soil	MKMRQVIGLLLMAACIAGLVAWILHPPEGNDSNLLVRSFGGAVLGGGAYMARKFLGRKRPISRP*
Ga0137410_116300221	3300012944	Vadose Zone Soil	MKMRQVIGLLLMSACIAGLVAWILHPLEGNDSNLLVRSFGGAVLGGGAYMAWRLLVRKRPISRS*
Ga0157371_115844752	3300013102	Corn Rhizosphere	MSLRQVIGLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTVVLGGGAFLAWKFLVRPRP
Ga0157370_104572502	3300013104	Corn Rhizosphere	VKARQVIGFLLMAICIVGLVAWNVSPPEGNDTNLLNRSVVTVVLGSGAFLAWKFLVRKRPANRV*
Ga0157378_102356853	3300013297	Miscanthus Rhizosphere	MKARQAIGLLLMAACIAGLLAFNLYPPEGDDSNLLNKAVVTAVLGGGAFLAWKFLVRTRPANRD*
Ga0157378_104657573	3300013297	Miscanthus Rhizosphere	MRQAIGLLLMAACIAGLIAYNIHPPEGEDTNLLVRSVASLILGGAAFLAWRFLVRTRPS*
Ga0157378_107625662	3300013297	Miscanthus Rhizosphere	MKVRQVIGLLLMVICVAGLLAFNIHPPEGDDSNLLNKFVVTAVLGGGAFLAWRFLVRTRPA*
Ga0163162_118761082	3300013306	Switchgrass Rhizosphere	MSLRQVIGFLLMAICIAGLLAFNIHPPEGDDSNLLNKAVVTVVLGGAAFLAWKFLVRPRPANRD*
Ga0163162_120975052	3300013306	Switchgrass Rhizosphere	MQPRQVIGSLLMVICIAGLLAFNIHPPEGGDSNLLNKAVVTMVLGGGAFLAWKFLVRPRPFNRD*
Ga0157372_114281281	3300013307	Corn Rhizosphere	MKVRPAIGLLLMVICIAGLLAFNIHPPEGEDSNLLNKAVVTAVLGGGAFLAWRFL
Ga0157375_108114022	3300013308	Miscanthus Rhizosphere	MRQAIGLLLMAACMAGLLAYNIHPPEGEDTNLLVRAVASLILGGGAFLAWKLLVRRRPAGPA*
Ga0163163_102692253	3300014325	Switchgrass Rhizosphere	MSLRQMIGFLLMAICIAGLLAFNVHPPEGDDSNLLNKAVVTVVLGGGAFLAWKFLVRPPPANRD*
Ga0157376_123022421	3300014969	Miscanthus Rhizosphere	MRQAIGLLLMAACMAGLLAYNIHPPEGEDTNLLLRAVASLILGGGAFLAWKLLVRRRPAGPA*
Ga0132258_116915953	3300015371	Arabidopsis Rhizosphere	VKTRQVIGFLLMVICTVGLVAWNVRPPEGDDTNLLNRSVVTLVLGSGAFLAWKLLVRTRPTGRD*
Ga0132255_1020942832	3300015374	Arabidopsis Rhizosphere	MKARQAIGLLLMVICVAGLLAFNIHPPEGDDSNLLNKLVVTAVLGAGSFLAWKFLVRPRRT*
Ga0132255_1049443621	3300015374	Arabidopsis Rhizosphere	MSLRLVIGALLMAICIAGLLAFNIHPPEGEDSNLLNKAVVTAVLGGGAFLAWRFLVRRRP
Ga0190274_117164812	3300018476	Soil	ENPMKLRQVIGLLLMADCIAGLVAWILNPLEGNDSNLLVRSFGGAVLGGGAFLAWRFLVRKRPISRS
Ga0193717_10277163	3300020060	Soil	MKARRAIGLLLTVACIAGLAAWNIHPPEGEDTNLLVRAVVTLILGGGAFLAWRFLVRARPADQV
Ga0247794_102764622	3300024055	Soil	GRHMQPRQVIGSLLMVICIAGLLAFNIHPPEGGDSNLLNKAVVTLVLGGAAFLAWRFLVRSRPVNRD
Ga0207682_101329762	3300025893	Miscanthus Rhizosphere	MKARQVIGLLLMVICVAGLLAFNIHPPEGDDSNLLNKFVVTAVLGGGAFLAWRFLVRTRP
Ga0207680_101012033	3300025903	Switchgrass Rhizosphere	MSLRQVIGLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTVVLGGGAFLAWKFLVRKPPANRA
Ga0207680_101208942	3300025903	Switchgrass Rhizosphere	MSLRQVIGLLLMAICIAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFLAWRFLVQRRPADPV
Ga0207645_101653633	3300025907	Miscanthus Rhizosphere	EQIRVEHHMSLRQVIGLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTVVLGGGAFLAWKLLVRTRPTGRD
Ga0207654_100251935	3300025911	Corn Rhizosphere	MKARQAIGLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFAAWKFLVRTRR
Ga0207654_112382252	3300025911	Corn Rhizosphere	MSLRLVIGVLLMAICIAGLLAFNIHPPEGEDSNLLNKAVVTAVLGGGAFLAWRFLVRRRPADPV
Ga0207695_100889332	3300025913	Corn Rhizosphere	MKARQVIGLLLMVVCVVGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFLAWKFLVRPRR
Ga0207695_102132853	3300025913	Corn Rhizosphere	MKARRIIGFLLVVICIVGLVAWNVSPPEGHDTNLLNRSVVTLVLGGGAFAAWKFLVRGA
Ga0207695_103010913	3300025913	Corn Rhizosphere	MTARRAIGLLLMAACIAGLLAFNIHPPEGQDSNLLNKAVVTAVLGGGAFLAWKFLVRTRR
Ga0207671_103567802	3300025914	Corn Rhizosphere	MSLRLVIGVLLMAICIAGLLAFNIHPPEGEDSNLLNKAVVTAVLGGGAFLAWRFLVQRRPADPV
Ga0207671_111740442	3300025914	Corn Rhizosphere	MKVRPAIGLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFAAWKFLVRTRR
Ga0207694_104506382	3300025924	Corn Rhizosphere	MKARQVIGSLLMVVCIAGLLAFNIHPPEGDDSNLLNKLVVTVVLGGGAFAAWKFLVRTRR
Ga0207650_107782792	3300025925	Switchgrass Rhizosphere	MKARQAIGLLLMAICIAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFLAWKFLVRRA
Ga0207644_104744112	3300025931	Switchgrass Rhizosphere	MSLRQVIGLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFLAWKFLVRPRR
Ga0207686_111022322	3300025934	Miscanthus Rhizosphere	MRQAIGLLLMAVCIAGLIAYNIHPPEGEDTNLLVRSVASLILGGAAFLAWRFLVRTRPS
Ga0207709_101054283	3300025935	Miscanthus Rhizosphere	MKARQAIGLLLMVICVAGLLAFNIHPPEGDDSNLLNKFVVTAVLGAGSFLAWKFLVRPRPANRDPTPGVPIRTI
Ga0207704_100343153	3300025938	Miscanthus Rhizosphere	MQPRQVIGSLLMVICIAGLLAFNIHPPEGGDSNLLNKAVVTLVLGGAAFLAWRFLVRSRPVNRD
Ga0207691_103255992	3300025940	Miscanthus Rhizosphere	MKARQAIGLLLMVICVAGLLAFNIHPPEGDDSNLLNKFVVTAVLGAGSFLAWKFLVRPRPANRD
Ga0207691_114035531	3300025940	Miscanthus Rhizosphere	VIGFLLMAICIAGLLAFNIHPPEGDDSNLLNKAVVTVVLGGAAFLAWRFLVRSRPVNRD
Ga0207711_103167643	3300025941	Switchgrass Rhizosphere	MSLRQVIGLLLMAICIAGLLAFNIHPPEGEDSNLLNKAVVTAVLGGGAFLAWRFLVQRRPADPV
Ga0207661_114108952	3300025944	Corn Rhizosphere	MSLRQVIGLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFLAWNDWGFA
Ga0207679_103905202	3300025945	Corn Rhizosphere	MKVRPAIGLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFLAWKFLVRTRR
Ga0207712_100125224	3300025961	Switchgrass Rhizosphere	MSLRLVIGALLMAICIAGLLAFNIHPPEGEDSNLLNKAVVTAVLGGGAFLAWRFLVRRRPADPV
Ga0207640_116559901	3300025981	Corn Rhizosphere	LLLMVVCVAGLLAFNIHPPEGDDSNLLNKAVVTVVLGGGAFLAWKFLVRPRPANRD
Ga0207703_123303232	3300026035	Switchgrass Rhizosphere	LMAACIAGLLAFNSHPPEGDDSNLLNKAVVTAVLGGGAFLAWKFLVRTRPANGD
Ga0207702_115355071	3300026078	Corn Rhizosphere	MKARQVIGSLLMVVCIAGLLAFNIHPPEGDDSNLLNKAVVTVVLGGGAFLAWKFLVRPRPTAQH
Ga0207641_105132071	3300026088	Switchgrass Rhizosphere	MSLRLVIGVLLMAICIAGLLAFNIHPPEGEDSNLLNKAVVTAVLGGGAFLAWRFL
Ga0207648_100618152	3300026089	Miscanthus Rhizosphere	MQPRQVIGSLLIVICIAGLLAFNIHPPEGGDSNLLNKAVVTAVLGGGAFLAWKFLVRTRPANRD
Ga0268266_101074372	3300028379	Switchgrass Rhizosphere	MKARQVIGSLLMVVCIAGLLAFNIHPPEGDDSNLLNKAVVTIVLGGGAFLAWKFLVRPRR
Ga0268266_101552754	3300028379	Switchgrass Rhizosphere	MKARQVIGTLLMAACIAGLLAFNIHPPEGEDSNLLNKAVVTAVLGGGAFLAWKFLVRTRR
Ga0268265_107575362	3300028380	Switchgrass Rhizosphere	MSLRQVIGLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTVVLGGGAFLAWKFLVRPRPANRD
Ga0268264_105261822	3300028381	Switchgrass Rhizosphere	MKARPAIGLLLMVICIAGLLAFNIHPPEGDDSNLLNKAVVTAVLGGGAFLAWKFLVRGT
Ga0307506_101104132	3300031366	Soil	RQAIGLLLMAACIAGLAAWILHPLEGNDSNLLVRSFGGAVLGGGAFMAWRFLVRKRPTGR
Ga0307513_109811362	3300031456	Ectomycorrhiza	MKLRQVIGLLLMAACIAGLVAWILHPLEGNDSNLLVRSFGGAVLGGGALMAWMFLVRKRPISRS
Ga0307513_110140882	3300031456	Ectomycorrhiza	MKLRQVIGLLLMAACITGLVAWILHPLEGNDSNLLVRSFGGAVLGGGAFMAWMFLVRKRPIRQS
Ga0307516_100435992	3300031730	Ectomycorrhiza	MKMRQVIGLLLMAACITGLVAYNIHPPEGEDTNLLVRAVATLILGGGAFLAWRFLVRTRPADPA
Ga0308175_1013140492	3300031938	Soil	MKARQIIGALLMVICIAGLLAFNIHPPEGEDSNLLNKAVVAAVLGSGAFLAW
Ga0310810_103290923	3300033412	Soil	VKTRQVIGFLLVVICTVGLVAWNVRPPEGDDTNLLNRSVVTLVLGSGAFLAWKLLVRTRPTGRD
Ga0370497_0027382_796_975	3300034965	Untreated Peat Soil	MRRAIGLALMAICIAALLAYNIHPPEGEDTNLLVRSVATAVTGGGAFLAWKFLVQKNRT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F070258

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences