Metagenome Family F070251

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070251
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	49 residues
Representative Sequence	MSAPGRPKRELLPLGGKARSAKGADSSAPGRPKRELLPLGGTARSAKGAP
Number of Associated Samples	89
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.29 %
% of genes near scaffold ends (potentially truncated)	47.97 %
% of genes from short scaffolds (< 2000 bps)	60.16 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.13

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (63.415 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (13.821 % of family members)
Environment Ontology (ENVO)	Unclassified (46.341 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.089 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.13
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.13
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF02910	Succ_DH_flav_C	3.25
PF00005	ABC_tran	2.44
PF01040	UbiA	2.44
PF08352	oligo_HPY	2.44
PF03167	UDG	2.44
PF00528	BPD_transp_1	2.44
PF01568	Molydop_binding	1.63
PF02769	AIRS_C	1.63
PF04442	CtaG_Cox11	1.63
PF02405	MlaE	1.63
PF00253	Ribosomal_S14	1.63
PF12399	BCA_ABC_TP_C	1.63
PF08282	Hydrolase_3	1.63
PF13193	AMP-binding_C	1.63
PF08241	Methyltransf_11	1.63
PF04909	Amidohydro_2	1.63
PF13183	Fer4_8	1.63
PF00850	Hist_deacetyl	1.63
PF00873	ACR_tran	1.63
PF07690	MFS_1	0.81
PF00639	Rotamase	0.81
PF12911	OppC_N	0.81
PF17147	PFOR_II	0.81
PF08279	HTH_11	0.81
PF00672	HAMP	0.81
PF13692	Glyco_trans_1_4	0.81
PF13614	AAA_31	0.81
PF01264	Chorismate_synt	0.81
PF00206	Lyase_1	0.81
PF02653	BPD_transp_2	0.81
PF14711	Nitr_red_bet_C	0.81
PF03900	Porphobil_deamC	0.81
PF01791	DeoC	0.81
PF07311	Dodecin	0.81
PF02874	ATP-synt_ab_N	0.81
PF00346	Complex1_49kDa	0.81
PF01863	YgjP-like	0.81
PF01380	SIS	0.81
PF06835	LptC	0.81
PF01464	SLT	0.81
PF00496	SBP_bac_5	0.81
PF05138	PaaA_PaaC	0.81
PF13180	PDZ_2	0.81
PF00828	Ribosomal_L27A	0.81
PF02237	BPL_C	0.81
PF07943	PBP5_C	0.81
PF08402	TOBE_2	0.81
PF04362	Iron_traffic	0.81
PF01990	ATP-synt_F	0.81
PF01266	DAO	0.81
PF00582	Usp	0.81
PF01493	GXGXG	0.81
PF05683	Fumerase_C	0.81
PF00155	Aminotran_1_2	0.81
PF03480	DctP	0.81
PF00137	ATP-synt_C	0.81
PF02091	tRNA-synt_2e	0.81
PF01850	PIN	0.81
PF02272	DHHA1	0.81
PF02803	Thiolase_C	0.81
PF01202	SKI	0.81
PF13416	SBP_bac_8	0.81
PF03740	PdxJ	0.81
PF11306	DUF3108	0.81
PF01553	Acyltransferase	0.81
PF07021	MetW	0.81
PF13437	HlyD_3	0.81
PF11612	T2SSJ	0.81
PF03186	CobD_Cbib	0.81
PF00561	Abhydrolase_1	0.81
PF00497	SBP_bac_3	0.81
PF08223	PaaX_C	0.81
PF13085	Fer2_3	0.81
PF00571	CBS	0.81
PF01180	DHO_dh	0.81
PF11249	DUF3047	0.81
PF00890	FAD_binding_2	0.81
PF05987	DUF898	0.81
PF02600	DsbB	0.81
PF01032	FecCD	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0123	Acetoin utilization deacetylase AcuC or a related deacetylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	3.25
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	2.44
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	2.44
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	2.44
COG0767	Permease subunit MlaE of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	1.63
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	1.63
COG2924	Fe-S cluster biosynthesis and repair protein YggX	Posttranslational modification, protein turnover, chaperones [O]	1.63
COG3175	Cytochrome c oxidase assembly protein Cox11	Posttranslational modification, protein turnover, chaperones [O]	1.63
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	1.63
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	1.63
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	1.63
COG0199	Ribosomal protein S14	Translation, ribosomal structure and biogenesis [J]	1.63
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	1.63
COG1838	Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain	Energy production and conversion [C]	0.81
COG1727	Ribosomal protein L18E	Translation, ribosomal structure and biogenesis [J]	0.81
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.81
COG3261	Ni,Fe-hydrogenase III large subunit	Energy production and conversion [C]	0.81
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.81
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.81
COG3327	DNA-binding transcriptional regulator PaaX (phenylacetic acid degradation)	Transcription [K]	0.81
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.81
COG3396	1,2-phenylacetyl-CoA epoxidase, catalytic subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.81
COG4269	Uncharacterized membrane protein YjgN, DUF898 family	Function unknown [S]	0.81
COG1495	Disulfide bond formation protein DsbB	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG1451	UTP pyrophosphatase, metal-dependent hydrolase family	General function prediction only [R]	0.81
COG1436	Archaeal/vacuolar-type H+-ATPase subunit F/Vma7	Energy production and conversion [C]	0.81
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.81
COG1270	Cobalamin biosynthesis protein CobD/CbiB	Coenzyme transport and metabolism [H]	0.81
COG0854	Pyridoxine 5'-phosphate synthase PdxJ	Coenzyme transport and metabolism [H]	0.81
COG0760	Peptidyl-prolyl isomerase, parvulin family	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG0752	Glycyl-tRNA synthetase, alpha subunit	Translation, ribosomal structure and biogenesis [J]	0.81
COG0649	NADH:ubiquinone oxidoreductase 49 kD subunit (chain D)	Energy production and conversion [C]	0.81
COG0636	FoF1-type ATP synthase, membrane subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K	Energy production and conversion [C]	0.81
COG0340	Biotin-protein ligase	Coenzyme transport and metabolism [H]	0.81
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.81
COG0181	Porphobilinogen deaminase	Coenzyme transport and metabolism [H]	0.81
COG0167	Dihydroorotate dehydrogenase	Nucleotide transport and metabolism [F]	0.81
COG0082	Chorismate synthase	Amino acid transport and metabolism [E]	0.81
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.41 %
Unclassified	root	N/A	36.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.41 %
Unclassified	root	N/A	36.59 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.41 %
Unclassified	root	N/A	36.59 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	57.72 %
Unclassified	root	N/A	36.59 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	39.84 %
Unclassified	root	N/A	36.59 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.25 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.59 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	13.01 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	2.44 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1.63 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.81 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.81 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.59 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2.44 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.44 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	1.63 %
unclassified Burkholderiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	1.63 %
Sutterellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sutterellaceae	0.81 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.81 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.81 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.81 %
Rhodocyclaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae	0.81 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.81 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.59 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.44 %
Bordetella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella	1.63 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	1.63 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	1.63 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.81 %
Aromatoleum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum	0.81 %
Thioflavicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thioflavicoccus	0.81 %
Prosthecomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Prosthecomicrobium	0.81 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.81 %
Sutterellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sutterellaceae	0.81 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.59 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.44 %
unclassified Bordetella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella → unclassified Bordetella	1.63 %
Paraburkholderia caffeinitolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia caffeinitolerans	1.63 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	1.63 %
unclassified Aromatoleum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum	0.81 %
Prosthecomicrobium hirschii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Prosthecomicrobium → Prosthecomicrobium hirschii	0.81 %
unclassified Variovorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax	0.81 %
Thioflavicoccus mobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thioflavicoccus → Thioflavicoccus mobilis	0.81 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.81 %
Sutterellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sutterellaceae	0.81 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.59 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.44 %
Bordetella sp. FB-8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella → unclassified Bordetella → Bordetella sp. FB-8	1.63 %
Paraburkholderia caffeinitolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia caffeinitolerans	1.63 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	1.63 %
Variovorax sp. CF079	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. CF079	0.81 %
Aromatoleum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	0.81 %
Prosthecomicrobium hirschii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Prosthecomicrobium → Prosthecomicrobium hirschii	0.81 %
Thioflavicoccus mobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thioflavicoccus → Thioflavicoccus mobilis	0.81 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.81 %
Sutterellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sutterellaceae	0.81 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003763\|Ga0055529_1000432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella → unclassified Bordetella → Bordetella sp. FB-8	42394	Open in IMG/M
3300005218\|Ga0068996_10073205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	723	Open in IMG/M
3300005347\|Ga0070668_100564653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	992	Open in IMG/M
3300005355\|Ga0070671_100146443	All Organisms → cellular organisms → Bacteria → Proteobacteria	1993	Open in IMG/M
3300005355\|Ga0070671_100153681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1943	Open in IMG/M
3300005444\|Ga0070694_101958604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	501	Open in IMG/M
3300005466\|Ga0070685_11056569	Not Available	612	Open in IMG/M
3300005548\|Ga0070665_100058191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3875	Open in IMG/M
3300005618\|Ga0068864_100242893	Not Available	1669	Open in IMG/M
3300005841\|Ga0068863_100080907	All Organisms → cellular organisms → Bacteria → Proteobacteria	3077	Open in IMG/M
3300006237\|Ga0097621_100113172	All Organisms → cellular organisms → Bacteria → Proteobacteria	2295	Open in IMG/M
3300006237\|Ga0097621_100179521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	1829	Open in IMG/M
3300006854\|Ga0075425_100486827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1420	Open in IMG/M
3300006871\|Ga0075434_102012245	Not Available	583	Open in IMG/M
3300007521\|Ga0105044_10022761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Prosthecomicrobium → Prosthecomicrobium hirschii	8297	Open in IMG/M
3300009091\|Ga0102851_10050117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3350	Open in IMG/M
3300009091\|Ga0102851_10183643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1943	Open in IMG/M
3300009091\|Ga0102851_12257349	Not Available	620	Open in IMG/M
3300009131\|Ga0115027_10197298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1278	Open in IMG/M
3300009131\|Ga0115027_10256285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1151	Open in IMG/M
3300009131\|Ga0115027_10695947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	762	Open in IMG/M
3300009131\|Ga0115027_11906606	Not Available	501	Open in IMG/M
3300009177\|Ga0105248_10440359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia caffeinitolerans	1468	Open in IMG/M
3300009506\|Ga0118657_12119519	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300010360\|Ga0126372_11057430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	827	Open in IMG/M
3300010403\|Ga0134123_12310645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	601	Open in IMG/M
3300013308\|Ga0157375_10181735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2255	Open in IMG/M
3300014205\|Ga0172380_10072831	Not Available	2840	Open in IMG/M
3300014325\|Ga0163163_10368494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1493	Open in IMG/M
3300014326\|Ga0157380_12464597	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300014880\|Ga0180082_1080725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	719	Open in IMG/M
3300014969\|Ga0157376_10018080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5394	Open in IMG/M
3300015371\|Ga0132258_10508973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3012	Open in IMG/M
3300015371\|Ga0132258_10901575	All Organisms → cellular organisms → Bacteria → Proteobacteria	2232	Open in IMG/M
3300015373\|Ga0132257_101803073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	786	Open in IMG/M
3300016270\|Ga0182036_10927487	All Organisms → cellular organisms → Bacteria → Proteobacteria	715	Open in IMG/M
3300018476\|Ga0190274_10055266	All Organisms → cellular organisms → Bacteria → Proteobacteria	2900	Open in IMG/M
3300018476\|Ga0190274_10142847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2004	Open in IMG/M
3300018476\|Ga0190274_11847802	Not Available	699	Open in IMG/M
3300025272\|Ga0209455_1004631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella → unclassified Bordetella → Bordetella sp. FB-8	4441	Open in IMG/M
3300025907\|Ga0207645_10760315	Not Available	659	Open in IMG/M
3300025907\|Ga0207645_11174309	Not Available	516	Open in IMG/M
3300025925\|Ga0207650_10247291	All Organisms → cellular organisms → Bacteria → Proteobacteria	1443	Open in IMG/M
3300025925\|Ga0207650_11643891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	545	Open in IMG/M
3300025926\|Ga0207659_10324344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia caffeinitolerans	1271	Open in IMG/M
3300025926\|Ga0207659_10372857	Not Available	1189	Open in IMG/M
3300025926\|Ga0207659_11581497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	560	Open in IMG/M
3300025931\|Ga0207644_10075961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sutterellaceae	2470	Open in IMG/M
3300025940\|Ga0207691_11225497	All Organisms → cellular organisms → Bacteria → Proteobacteria	621	Open in IMG/M
3300025941\|Ga0207711_10022484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. CF079	5273	Open in IMG/M
3300025973\|Ga0210145_1014068	Not Available	873	Open in IMG/M
3300026067\|Ga0207678_11098617	Not Available	704	Open in IMG/M
3300026075\|Ga0207708_10793661	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300026088\|Ga0207641_10022316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5210	Open in IMG/M
3300026089\|Ga0207648_11658277	All Organisms → cellular organisms → Bacteria → Proteobacteria	601	Open in IMG/M
3300026095\|Ga0207676_10029851	All Organisms → cellular organisms → Bacteria	4086	Open in IMG/M
3300027877\|Ga0209293_10064022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1559	Open in IMG/M
3300027877\|Ga0209293_10751830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	517	Open in IMG/M
3300027885\|Ga0209450_10017208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	4019	Open in IMG/M
3300027885\|Ga0209450_10137356	Not Available	1673	Open in IMG/M
3300028603\|Ga0265293_10372439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	874	Open in IMG/M
3300030336\|Ga0247826_10982625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	670	Open in IMG/M
3300031772\|Ga0315288_11421023	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300031820\|Ga0307473_10097758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1554	Open in IMG/M
3300031873\|Ga0315297_11656545	Not Available	513	Open in IMG/M
3300031997\|Ga0315278_11378750	All Organisms → cellular organisms → Bacteria → Proteobacteria	683	Open in IMG/M
3300031999\|Ga0315274_10116140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	3452	Open in IMG/M
3300032053\|Ga0315284_10163938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2911	Open in IMG/M
3300032156\|Ga0315295_10801235	Not Available	946	Open in IMG/M
3300032174\|Ga0307470_11299814	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300032177\|Ga0315276_10627553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1154	Open in IMG/M
3300032177\|Ga0315276_11301805	Not Available	763	Open in IMG/M
3300032180\|Ga0307471_100788285	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300032180\|Ga0307471_102732290	Not Available	626	Open in IMG/M
3300032205\|Ga0307472_100325402	All Organisms → cellular organisms → Bacteria → Proteobacteria	1249	Open in IMG/M
3300032256\|Ga0315271_11415747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	600	Open in IMG/M
3300032275\|Ga0315270_10156769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1374	Open in IMG/M
3300032276\|Ga0316188_10515940	Not Available	639	Open in IMG/M
3300032397\|Ga0315287_10137773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2809	Open in IMG/M
3300032397\|Ga0315287_10141932	All Organisms → cellular organisms → Bacteria → Proteobacteria	2769	Open in IMG/M
3300032397\|Ga0315287_10222127	All Organisms → cellular organisms → Bacteria → Proteobacteria	2211	Open in IMG/M
3300032516\|Ga0315273_10049238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thioflavicoccus → Thioflavicoccus mobilis	5691	Open in IMG/M
3300032782\|Ga0335082_10062198	All Organisms → cellular organisms → Bacteria	3810	Open in IMG/M
3300033004\|Ga0335084_10114298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2806	Open in IMG/M
3300033004\|Ga0335084_10319061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1605	Open in IMG/M
3300033004\|Ga0335084_10330231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1574	Open in IMG/M
3300033004\|Ga0335084_10427992	All Organisms → cellular organisms → Bacteria → Proteobacteria	1362	Open in IMG/M
3300033408\|Ga0316605_10159599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1845	Open in IMG/M
3300033413\|Ga0316603_11432944	Not Available	655	Open in IMG/M
3300033414\|Ga0316619_10081711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1989	Open in IMG/M
3300033418\|Ga0316625_100177138	Not Available	1362	Open in IMG/M
3300033418\|Ga0316625_100338924	Not Available	1097	Open in IMG/M
3300033418\|Ga0316625_101673280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	611	Open in IMG/M
3300033482\|Ga0316627_100375985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1207	Open in IMG/M
3300033482\|Ga0316627_101346752	Not Available	714	Open in IMG/M
3300033483\|Ga0316629_10810475	Not Available	720	Open in IMG/M
3300033557\|Ga0316617_100601169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1021	Open in IMG/M
3300034115\|Ga0364945_0060878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1067	Open in IMG/M
3300034149\|Ga0364929_0052557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1238	Open in IMG/M
3300034150\|Ga0364933_024078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1468	Open in IMG/M
3300034151\|Ga0364935_0066399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	1072	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.16%
Host-Associated	Host-Associated	37.40%
Engineered	Engineered	2.44%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	37.40%
Terrestrial	Environmental → Terrestrial	32.52%
Aquatic	Environmental → Aquatic	27.64%
Solid Waste	Engineered → Solid Waste	2.44%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	29.27%
Freshwater	Environmental → Aquatic → Freshwater	23.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.51%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.01%
Roots	Host-Associated → Plants → Roots	4.88%
Marine	Environmental → Aquatic → Marine	3.25%
Floodplain	Environmental → Terrestrial → Floodplain	3.25%
Landfill	Engineered → Solid Waste → Landfill	2.44%
Sediment	Environmental → Aquatic → Sediment	0.81%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	13.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.01%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	12.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.50%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.88%
Loam	Environmental → Terrestrial → Soil → Loam	3.25%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	3.25%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.25%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.44%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.44%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	2.44%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.63%
Endophytes	Host-Associated → Plants → Roots → Endophytes	1.63%
Ice	Environmental → Aquatic → Freshwater → Ice	0.81%
Coastal	Environmental → Aquatic → Marine → Coastal	0.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	13.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.50%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.88%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.25%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	3.25%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.25%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.44%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	2.44%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.63%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.63%
Unclassified	Host-Associated → Plants → Roots → Endophytes → Unclassified	1.63%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	0.81%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.81%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.81%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	13.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	13.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	8.13%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	6.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.69%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	4.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.25%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	3.25%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.44%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.44%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.44%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	2.44%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.63%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.63%
Arabidopsis Root	Host-Associated → Plants → Roots → Endophytes → Unclassified → Arabidopsis Root	1.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.63%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	0.81%
Worm Burrow	Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow	0.81%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	0.81%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003763	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005218	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007521	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009506	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014205	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 162 metaG	Engineered	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014880	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_16_10D	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300025272	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025973	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300028603	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138R	Engineered	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032276	Coastal sediment microbial communities from Maine, United States - Phippsburg worm burrow 1	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0055529_100043219	3300003763	Arabidopsis Root	MSAPGRPKRSFPPWGEGAQRQGGAMSAPGRPKRSFPLGGKARSAKGAI*
Ga0062593_1012378972	3300004114	Soil	VTGQGAGLPPGRPNGGSLPPGGKARSAKGAHQSLPPGRPKEGSLPPGGKA
Ga0068996_100732052	3300005218	Natural And Restored Wetlands	MSTPGRPKCELLPLGGTARSAKGIHVCTPGRPKCELLPLGGAARSAKGVHK*
Ga0070676_104235202	3300005328	Miscanthus Rhizosphere	MSVPPGRPKERSLPLGGKARSAKGAVISVPPGRPKERSLPLGGKVRSAKGTQ*
Ga0070668_1005646532	3300005347	Switchgrass Rhizosphere	MSAPGRPKRESVPLGGKARSDEGAKLAPGRPKRESVPLGGKARSAKGAQ*
Ga0070671_1001464433	3300005355	Switchgrass Rhizosphere	MSAPGRPKRELVPLGGQRSGGSRKRGGPSNSAPGRPKREWVALGGKARSAKGAPQ*
Ga0070671_1001536813	3300005355	Switchgrass Rhizosphere	MSAPGRPKRELVPLGGKARSAKGAHIGAPGRPKRELVPLGGMARSAKGAV*
Ga0070694_1019586042	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	RPKEGSLPPGGKARSAKGAHNSPPPGRPKEGLLPLGGKARSAKGAQNRR*
Ga0068867_1023730051	3300005459	Miscanthus Rhizosphere	MSLPPGRPKEGSLPLGGKARSAKGAVICLPPGRPKEGSLPLGGKARSAKGAV
Ga0070685_110565691	3300005466	Switchgrass Rhizosphere	AQGRPKRELVPLGGTARSAKGAPIRAQGRPKRELVPLGGTARSAKGAP*
Ga0070665_1000581912	3300005548	Switchgrass Rhizosphere	MSAPGRPKRELRPLGGCGGRKVGAPGRPKRELLPLGGKARSAKGAHQ*
Ga0070704_1006835291	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MSPPSGRPKEGSLPPGGKARSAKGAHSSHPRGRPKEGSLPLGGKARSAKGA
Ga0068859_1004951531	3300005617	Switchgrass Rhizosphere	MSLPPGRPKEGSLPLGGKARSAKGAHSSLPPGRPKEGSLPLGGKARSAKGAHI
Ga0068859_1014636392	3300005617	Switchgrass Rhizosphere	MSVPPGRPKERSLPLGGKARSAKGAHICVPPGRQKERSLPLVGKAPSATGAQ*
Ga0068864_1002428931	3300005618	Switchgrass Rhizosphere	MSAPGRPKRELVPLGGQRSGGSRKRGGPSNSAPGRPKREWVPLGGKARSAKG
Ga0068861_1008732442	3300005719	Switchgrass Rhizosphere	MSLPPGRPKEGSLPLGGKARSAKGAHIRLPPGRPKEGSLPLGGKARSAKG
Ga0068863_1000809074	3300005841	Switchgrass Rhizosphere	MSAPGRPKRELLPLGGKARSAKGAHIRAPGRPKGELLPLGGKARSAKGAV*
Ga0068863_1007978981	3300005841	Switchgrass Rhizosphere	MSLPPGRPKEGSLPLGGKARSAKGAHICLPPGRPKEGSLPLGGKARSAKGAVNAPA*
Ga0068862_1008182371	3300005844	Switchgrass Rhizosphere	MSPPRGRPKEGSLPLGGKARSAKGAHICPPRGRPKEGSLPLGGKARSAKGA
Ga0097621_1001131724	3300006237	Miscanthus Rhizosphere	MSAPGRPKRELVPLGGQRSGGSRKRGGPSNSAPGRPKREWVPLGGKARSAKGAPQ*
Ga0097621_1001795211	3300006237	Miscanthus Rhizosphere	RAPGRPKRELLPLGGKARSAKGAHIRAPGRPKRELLPLGGKARSAKGAV*
Ga0068871_1020077361	3300006358	Miscanthus Rhizosphere	MSLPPGRPKEGSLPLGGKARSAKGAVICLPPGRPKEGSLPLGGKARSAKGAVICLPPGRPKE
Ga0075425_1004868271	3300006854	Populus Rhizosphere	MSAQGRPKRELLPLGGKARSAKGVVMSAQGRPKRELLP
Ga0075434_1020122451	3300006871	Populus Rhizosphere	MSAQGRPKRELLPLGGTARSAKGAHIRAQGRPKRELLPLGGT
Ga0105044_100227619	3300007521	Freshwater	MSAPGRPKRELLPLWGNGAPRQGGRLNAPGRPNRELLPLGGTARSARGAV*
Ga0102851_100501175	3300009091	Freshwater Wetlands	VSAPGRPKRELLPPGGTARSAKGAHRSAPGRPKRELLPPGGTARSAKGAHR*
Ga0102851_101836431	3300009091	Freshwater Wetlands	MSAPGRPKRESLPLGGTAPGAKGAHMSAPGRPKRESLPLG
Ga0102851_122573491	3300009091	Freshwater Wetlands	MSATGRPERESVPPGGKARSAKGAPSCATGRPERESVPPGG
Ga0115027_101972981	3300009131	Wetland	MSATGRPERESVPLGGTARSAKGAHVSATGRPERESVPLGGTARSAKGAHVSATG
Ga0115027_102562852	3300009131	Wetland	MSAPGRPKRESLPLGGTAPGAKGAHMSAPGRPKRELLPLGGTARSAKGAP*
Ga0115027_106959473	3300009131	Wetland	VSAPGRPKRELLPPGGTARSAKGAHRSAPGRPKRE
Ga0115027_119066062	3300009131	Wetland	MSAQGRPKRELLPRGGTARSAEGVVHRAPGRPKRE
Ga0105248_104403591	3300009177	Switchgrass Rhizosphere	MSAPGRPKRELVPLGGKARSAKGAHIGAPGRPKREL
Ga0118657_121195191	3300009506	Mangrove Sediment	MSAPGRPKRESVPRGGTARSAKGGSSMSAPGRPKRE
Ga0126372_110574301	3300010360	Tropical Forest Soil	VMSAQGRPKRELLPLGGKAQSAKGVMSAQGRPKRELLPLGGKAQSAKGVV*
Ga0134123_123106451	3300010403	Terrestrial Soil	MSAPGRPKRELLPLGGQRSGGRRKRGGPSNRAPGRPKRELVPLGGKARSAKGAHQ*
Ga0157375_101817354	3300013308	Miscanthus Rhizosphere	MSAPGRPKRELRPLGGCGGRKVRAPGRPKRATALCRGGKARSVKGAH
Ga0172380_100062959	3300014205	Landfill Leachate	MNHPPGRPKDGSLPLGGKSRSDKGAPNSHPPGRPKDGSLPPGGKSRSDKGALLA*
Ga0172380_100728312	3300014205	Landfill Leachate	MRHPPGRPKDGSLPLGGKARSAKGAPLTHPPARPKDGSLPLGGTARSPKGAL*
Ga0163163_103684943	3300014325	Switchgrass Rhizosphere	MSAPGRPKRESVPLGGKARSAKGAQRAPGRPKRESVPLGGKARSAKGAQ*
Ga0157380_124645972	3300014326	Switchgrass Rhizosphere	SMGPPRGRPKEGPLPLGGKARSAKGAHICPPRGRPKEGPLPPGGKARSAKGAQ*
Ga0180082_10807252	3300014880	Soil	MSAPGRPKRELLPLGGKARSAKGADSSAPGRPKRELLPLGGTARSAKGAP*
Ga0157376_100180801	3300014969	Miscanthus Rhizosphere	MSAPGRPKRELVPLGGQRSGGSRKRGGPSNSAPGRPKREWVPLGGKARSAKGA
Ga0132258_105089732	3300015371	Arabidopsis Rhizosphere	MSARGRPKRELLPLGGTPHSAKGPHPSAPGRPKPETAVRLGGKARSAKDAP*
Ga0132258_109015754	3300015371	Arabidopsis Rhizosphere	MSAQGRPNRESLPLGGKARSAKGAPIRAPGRPERESLPLGGKARSAKGAA*
Ga0132257_1018030731	3300015373	Arabidopsis Rhizosphere	IRAPGRPKRELLPLGGKARSAKGAPIRAPGRPERESLPLGGKARSAKGAA*
Ga0182036_109274872	3300016270	Soil	HERAGPPQARLLPLRGDGAKRQGGLMSAQGRPKRELLPLGGTAQSAKGAP
Ga0190274_100552662	3300018476	Soil	MSAPGRPKRELLPLRGEGAQRQGGTMSAPGRPKRELLPLGGKARSAKGAP
Ga0190274_101428472	3300018476	Soil	MSAPGRPKRELLPLGGKARSAKGVLIRAPGRPKRGTALCLAGKARSAKGAPMNGAR
Ga0190274_118478021	3300018476	Soil	MSAPGRPKRELLPLGGKARSAKGAHISAPGRPKRELVPLGGKARSAK
Ga0209455_10046312	3300025272	Arabidopsis Root	MSAPGRPKRSFPPWGEGAQRQGGAMSAPGRPKRSFPLGGKARSAKGAI
Ga0207645_107603151	3300025907	Miscanthus Rhizosphere	MSVPPGRPKERSLPLGGKARSAKGAHICVPPGRPKERSLPLGGKARSAKGALI
Ga0207645_111743091	3300025907	Miscanthus Rhizosphere	GRPKRELVPLGGTARSAKGAPIRAQGRPKRELVPLGGTARSAKGAP
Ga0207650_102472912	3300025925	Switchgrass Rhizosphere	MSAPGRPKRELRPLGGCGGRKVGAPGRPKRELLPLGGKARSAKGAHK
Ga0207650_116438912	3300025925	Switchgrass Rhizosphere	VSAQGRPKRELVPLGGTARSAKGAPIRAQGRPKRELVPLG
Ga0207659_103243441	3300025926	Miscanthus Rhizosphere	MSAPGRPKRELVPLGGKARSAKGAHIGAPGRPKRELVPLGGKARSAKGAHIGA
Ga0207659_103728573	3300025926	Miscanthus Rhizosphere	MSAPGRPKRELRPLGGCGGRKVGAPGRPKRELLPLGGKARSAKGAHQ
Ga0207659_113878861	3300025926	Miscanthus Rhizosphere	PRGSPKEGSLPRGGMVRSAEGAHLCPPHGRPKEGSLPRGGMARSAQGAS
Ga0207659_115814972	3300025926	Miscanthus Rhizosphere	VSAQGRPKRELVPLGGTARSAKGAPIRAQGRPKRELVPLGGTARSAKG
Ga0207701_102450171	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	KEGSLPLGGKARSAKGAHMSPPRGRPKEGSLPLGGKARSAKGAHISPPRGHPNGVRT
Ga0207644_100759612	3300025931	Switchgrass Rhizosphere	MSAPGRPKRELVPLGGQRSGGSRKRGGPSNSAPGRPKREWVALGGKARSAKGAPQ
Ga0207691_112254972	3300025940	Miscanthus Rhizosphere	MSAPGRPKRESVPLGGKARSDEGAKLAPGRPKRESVPLGGKARSAKGAQ
Ga0207711_100224842	3300025941	Switchgrass Rhizosphere	MSAPGRPKRELVPLGGKARSAKGAHIGAPGRPKRELLPLGGMARSAKGAV
Ga0210145_10140681	3300025973	Natural And Restored Wetlands	MSAKGRPERELLPHGGTARSAKGAPVSAKGRPERELLPHGGTARSAKGAPV
Ga0207678_110986171	3300026067	Corn Rhizosphere	VVSAQGRPKRELVPLGGTARSAKGAPIRAQGRPKRELVPLGGTARSAKGAP
Ga0207708_107936611	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	PGPGARGSGMSAPGRPKRELVPLGGKARSAKGAHIGAPGRPKRELVPLGGMARSAKGAV
Ga0207641_100223164	3300026088	Switchgrass Rhizosphere	MSAPGRPKRELLPLGGKARSAKGAHIRAPGRPKGELLPLGGKARSAKGAV
Ga0207641_108794922	3300026088	Switchgrass Rhizosphere	MSLPPGRPKEGSLPLGGKARSAKGAHHSLPPGRPKEGSLPPGGKARSAKGARVTFNA
Ga0207648_110470161	3300026089	Miscanthus Rhizosphere	GRPKEGSLPLGGKARSAKGAHICLPPGRPKEGSLPLGGKARSAKGAHK
Ga0207648_116582772	3300026089	Miscanthus Rhizosphere	RELVPLGGKARSAKGAHIGAPGRPKRELVPLGGMARSAKGAV
Ga0207676_100298514	3300026095	Switchgrass Rhizosphere	MSAPGRPKRELLPRGGKARSAKGAPIRAPGRPKRELLPRGGKARSANGAHISDAGPMGNSRTC
Ga0209293_100640221	3300027877	Wetland	VSAPGRPKRELLPPGGTARSAKGAHRSAPGRLKRELLPPGGT
Ga0209293_107518302	3300027877	Wetland	MSAPGRPKRESVPLGGTARSAKGVLVSAPGRPKRECSPSGGG
Ga0209450_100172082	3300027885	Freshwater Lake Sediment	VSAPGRPEREPLPLGGNGAQRRGGNVSAPGRPKRELLPLGGTARSAEGAP
Ga0209450_101373561	3300027885	Freshwater Lake Sediment	MSAPGRPKREWLPLGGTARSAQGVLMSAPGRPKREWLPLGGTARSAQGVLM
Ga0265293_103724392	3300028603	Landfill Leachate	MSAPGRPKRESPHGGAARSALGGAMSAPGRPKRESPHGG
Ga0307306_101106402	3300028782	Soil	MSLPPGRPKEGSLPLGGKARSAKGAHICPPPGRPKEDSLPLGGKACSAKGAPP
Ga0247826_109826252	3300030336	Soil	VSAPGRPKREIPHGGTARSAKGADMSAPGRPKREIPQ
Ga0315288_114210232	3300031772	Sediment	MSALGRPKRELLPLGGKARSAKGALMSAPGRPKRELLPLGGKARSAKGAPAMPSA
Ga0307473_100977581	3300031820	Hardwood Forest Soil	MSAQGRPKRESLPLGGKAPSAKGARIRAQGRPKREL
Ga0315297_116565452	3300031873	Sediment	MSTPGRPKCELLPLGGTARSAKGVLMATPGRPKCELLPLGGTARSAKGVHK
Ga0315278_113787501	3300031997	Sediment	MSAPGRPKRELLPLGGKARSAKGALMSAPSRPKRELLPLG
Ga0315274_101161406	3300031999	Sediment	MSAPGRPKRELLPLGGKALCAKGVPMSAPGRPKRELLPLGGKALCAKGVPR
Ga0307414_114814991	3300032004	Rhizosphere	MSTPHGRPKEGSLPSGDSAQREGAYMSTPHGRPKEGSLPLGGTARSAKGAPI
Ga0315284_101639383	3300032053	Sediment	RQDTVECYMSAPGRPKRELLPLGGKARSAKGALMSAPGRPKRELLPLGGKARSAKGAPAMPSA
Ga0315292_108616531	3300032143	Sediment	MSLPPGRPKEGSLPLGGKARSAKGAHSCLPPGRPKEGSLPHGGKAR
Ga0315295_108012351	3300032156	Sediment	MMSAPGRPKRELLPLGGTARSAKGAHMSAPGRPKRKLLPLGGTARS
Ga0307470_112998141	3300032174	Hardwood Forest Soil	MSAPGRPKRELLPLGGKARSAKGAPIRATGRPNRGTVVRLGGKARSAKGAHQ
Ga0315276_106275532	3300032177	Sediment	MSAPGRPKRELLPLGGKARSAKGALMSAPGRPKRELLPLGGKARSAKGAPAMPSA
Ga0315276_113018051	3300032177	Sediment	GRPKREWLPLGGKARSAKGAPMSAPGRPKREWLPLGGKARSAKGALTGS
Ga0307471_1007882851	3300032180	Hardwood Forest Soil	MSAQGRPKRESLPLRGKARSAKGAHIRAQGRPKRESLPLRG
Ga0307471_1027322901	3300032180	Hardwood Forest Soil	MSVQGRPKRELLPLGGTARSAKGAHIRVQGRPKRELLPLGGTARSAKGVHQ
Ga0307472_1003254022	3300032205	Hardwood Forest Soil	MSAQGRPKRELLPLGRTARSAKGAHIRAQNRPKRELLPLGRTARSAKGAQ
Ga0315271_106690401	3300032256	Sediment	VSPPRGRPKEGSLPLGGTARSAKGALTTPPRGRPKEGSLPLGVTARSAK
Ga0315271_114157472	3300032256	Sediment	MSAPGRPKRELLSRGGTARSAKGAHTSAPGRPKREH
Ga0315270_101567692	3300032275	Sediment	MSAPGRPKRELLPLGGKARSAKGALMSAPGRPKRELLPLGGKARSAKGAPM
Ga0316188_105159402	3300032276	Worm Burrow	MSAPGRPKRELLPRGGTARSAEGAVIRAPGRPKRELLPRGGTARSAEGASMSA
Ga0315287_1000886710	3300032397	Sediment	MSLPPGRPKEGDVPLGGTARSAREHISLPPGRPKEGDVPLGGTARSAREHISLPPGRHKDVHARIDPPWSS
Ga0315287_101377732	3300032397	Sediment	MSTPGRPKCESLPLGGTARSAKGVHIRTPGRPKCESLPLGGAVRSAKGVHK
Ga0315287_101419322	3300032397	Sediment	MSAPGRPKREWLPLGGKARSAKGAPMSAPGRPKREWLPLGGKARSAKGALTGS
Ga0315287_102221273	3300032397	Sediment	MSAPGRPKREWLPLGGTARSAKGVHQWSAPGRPKREWLPLGGTARSAKGVHQ
Ga0315273_100492387	3300032516	Sediment	MSAPGRPKRELLPLGGKALCAKGVPMSAPGRPKRELLPLGGK
Ga0335082_100621983	3300032782	Soil	MSAKGRPERELLPSGETARSAKGAPLSAMGRPERELLPPRGTARSAKGEPLSAMGR
Ga0335084_101142985	3300033004	Soil	MSAKGRPERESLPLGGTARSAEGAHIRAKGRPERESLPLGGTARSA
Ga0335084_103190614	3300033004	Soil	MSAKGRFERESLPLGGNARSAEGKPSAKGRPERESPPLGATARSAEGAPLGATP
Ga0335084_103302311	3300033004	Soil	MSAKGRPERELLPSGETARSAKGAPLSAMGRPERELLPPGGTARSAKGEPLSAMGG
Ga0335084_104279923	3300033004	Soil	IRAKGRPERESLPLGGTARSAAGAHIRAKGRPEREGAP
Ga0316605_101595992	3300033408	Soil	VSAPGRPKRELLPPGGTARSAKGAHRSAPGRPKRELLPPGGTARSAKGAHR
Ga0316603_114329442	3300033413	Soil	MSPPGRPKGELLPLEGTARSAKGAPVSTPGRPKCELLPPRGTARSARGR
Ga0316619_100817113	3300033414	Soil	VSAPGRPKRELPPPGGTARSAKGAHRSAPGRPKRELLPPGGTARSAKGAHR
Ga0316625_1001771383	3300033418	Soil	KGRPEGEFVPLGGKARSAKGAPQMSPKGRPEGEFVPLGGKARSAKGAHQ
Ga0316625_1003389241	3300033418	Soil	MSPPGRPKGEGVPLGGKARSAQGAVSPPGRPKGEGVPLGGKARSA
Ga0316625_1016732801	3300033418	Soil	VSAKGRPEREPFPLGGRARSAKGAHECAKGRPEREPFPLGGRARSAKGAHECATG
Ga0316627_1003759853	3300033482	Soil	MSAPGRPKRELLPLGGTARSAKGAQSSAPGRPKGEL
Ga0316627_1013467522	3300033482	Soil	MSAKGRPERESVPLGGKARSAKGAHSCAKGRPERESVPLGGKAR
Ga0316629_108104751	3300033483	Soil	MICIKGSAVSAKGRPERELLPLGGTARSAKGAPVSAKGRPERE
Ga0316626_108136291	3300033485	Soil	MSATGRPERESVPLGGKARSAKGAPSCATGRPERESVP
Ga0316630_100320894	3300033487	Soil	MSAPGRPKRESVPLGGTARSAKGAPSSAPGRFAGTQP
Ga0316617_1006011691	3300033557	Soil	VSAKGRPEREPFPLGGRARSAKGAHECAKGRPEREPFPLG
Ga0364945_0060878_221_391	3300034115	Sediment	MSAPGRPKRESLPLGGQRSGGSRKRGGPSNSAPGRPKRGTAVRLAGKARSAKGAHQ
Ga0364929_0052557_1045_1197	3300034149	Sediment	MSAPGRPKRELLPLGGKARSAKGADSSAPGRPKRELLPLGGTARSAKGAQ
Ga0364933_024078_774_929	3300034150	Sediment	MSAPGRPKRELLPLGGKARSAKGAMSPPGISRRGTAVRLGGTVRSAKVAYS
Ga0364935_0066399_2_160	3300034151	Sediment	MSAPGRPKGELLPLGGKARSAKGAHIRAPGRPKGELLPLGGKARSAKGAPVSM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F070251

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences