Metagenome / Metatranscriptome Family F070245

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070245
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	69 residues
Representative Sequence	VRSRGLKTGVGVVALLLPGGLLFLIGWVLVRALARASVRLREEMRAAGETGGVWQAVSTLSFRDVLREARATL
Number of Associated Samples	97
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.36 %
% of genes near scaffold ends (potentially truncated)	32.52 %
% of genes from short scaffolds (< 2000 bps)	78.05 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.358 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.699 % of family members)
Environment Ontology (ENVO)	Unclassified (26.016 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.650 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 68.32% β-sheet: 0.00% Coil/Unstructured: 31.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF07728	AAA_5	39.02
PF00004	AAA	5.69
PF08335	GlnD_UR_UTase	3.25
PF00072	Response_reg	1.63
PF14332	DUF4388	0.81
PF16258	DUF4912	0.81
PF01597	GCV_H	0.81
PF02899	Phage_int_SAM_1	0.81
PF01261	AP_endonuc_2	0.81
PF03710	GlnE	0.81
PF14534	DUF4440	0.81
PF09210	BE_C	0.81
PF08332	CaMKII_AD	0.81
PF00069	Pkinase	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.25
COG2844	UTP:GlnB (protein PII) uridylyltransferase	Signal transduction mechanisms [T]	3.25
COG1391	Glutamine synthetase adenylyltransferase	Posttranslational modification, protein turnover, chaperones [O]	1.63
COG0509	Glycine cleavage system protein H (lipoate-binding)	Amino acid transport and metabolism [E]	0.81
COG1543	Predicted glycosyl hydrolase, contains GH57 and DUF1957 domains	Carbohydrate transport and metabolism [G]	0.81
COG4875	Protein kinase association domain CaMKII_AD, NTF2-like superfamily	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.81
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.36 %
Unclassified	root	N/A	27.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.36 %
Unclassified	root	N/A	27.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.36 %
Unclassified	root	N/A	27.64 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	69.11 %
Unclassified	root	N/A	27.64 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	66.67 %
Unclassified	root	N/A	27.64 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	66.67 %
Unclassified	root	N/A	27.64 %

Name	Rank	Taxonomy	Distribution
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	66.67 %
Unclassified	root	N/A	27.64 %

Name	Rank	Taxonomy	Distribution
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	47.97 %
Unclassified	root	N/A	27.64 %

Name	Rank	Taxonomy	Distribution
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	40.65 %
Unclassified	root	N/A	27.64 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	5.69 %

Name	Rank	Taxonomy	Distribution
unclassified Myxococcaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae	32.52 %
Unclassified	root	N/A	27.64 %
Myxococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	7.32 %
Archangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium	1.63 %
Stigmatella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella	0.81 %

Name	Rank	Taxonomy	Distribution
Myxococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	32.52 %
Unclassified	root	N/A	27.64 %
Myxococcus xanthus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus xanthus	3.25 %
Archangium gephyra	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium gephyra	1.63 %
Stigmatella aurantiaca	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886012\|MBSR1b_contig_13425222	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	850	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_14242890	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus xanthus	961	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_102017541	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca	1282	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_102018417	Not Available	607	Open in IMG/M
3300002239\|JGI24034J26672_10047698	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	731	Open in IMG/M
3300003659\|JGI25404J52841_10019565	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus xanthus	1467	Open in IMG/M
3300004479\|Ga0062595_100522122	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	899	Open in IMG/M
3300004479\|Ga0062595_100657025	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	831	Open in IMG/M
3300004633\|Ga0066395_10799309	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus xanthus	566	Open in IMG/M
3300005093\|Ga0062594_100000017	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	18056	Open in IMG/M
3300005332\|Ga0066388_100573939	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1754	Open in IMG/M
3300005332\|Ga0066388_102990904	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	864	Open in IMG/M
3300005332\|Ga0066388_104622394	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	701	Open in IMG/M
3300005337\|Ga0070682_100145581	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1620	Open in IMG/M
3300005355\|Ga0070671_100449459	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	1106	Open in IMG/M
3300005441\|Ga0070700_100251367	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	1268	Open in IMG/M
3300005458\|Ga0070681_10268422	All Organisms → cellular organisms → Bacteria → Proteobacteria	1618	Open in IMG/M
3300005547\|Ga0070693_100017458	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus xanthus	3731	Open in IMG/M
3300005564\|Ga0070664_100000234	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	39862	Open in IMG/M
3300005764\|Ga0066903_100009582	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	9124	Open in IMG/M
3300005764\|Ga0066903_100157691	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	3281	Open in IMG/M
3300005983\|Ga0081540_1000029	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	150173	Open in IMG/M
3300006237\|Ga0097621_100234272	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1603	Open in IMG/M
3300006358\|Ga0068871_100334268	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1337	Open in IMG/M
3300006574\|Ga0074056_11681150	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1215	Open in IMG/M
3300006575\|Ga0074053_11856160	All Organisms → cellular organisms → Bacteria	1485	Open in IMG/M
3300006579\|Ga0074054_11925533	Not Available	1162	Open in IMG/M
3300006605\|Ga0074057_12310441	Not Available	1304	Open in IMG/M
3300006854\|Ga0075425_100814408	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1070	Open in IMG/M
3300006854\|Ga0075425_101991682	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	650	Open in IMG/M
3300006904\|Ga0075424_100671147	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1107	Open in IMG/M
3300007076\|Ga0075435_100696239	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	883	Open in IMG/M
3300009092\|Ga0105250_10487716	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	558	Open in IMG/M
3300009093\|Ga0105240_10000831	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	55810	Open in IMG/M
3300009162\|Ga0075423_11910473	Not Available	641	Open in IMG/M
3300009168\|Ga0105104_10000102	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	58808	Open in IMG/M
3300009174\|Ga0105241_10882750	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	829	Open in IMG/M
3300009176\|Ga0105242_10014749	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	6052	Open in IMG/M
3300009792\|Ga0126374_11040145	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	645	Open in IMG/M
3300010046\|Ga0126384_10418107	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1136	Open in IMG/M
3300010046\|Ga0126384_11782682	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	584	Open in IMG/M
3300010048\|Ga0126373_10838881	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	982	Open in IMG/M
3300010359\|Ga0126376_11573166	Not Available	689	Open in IMG/M
3300010360\|Ga0126372_10487964	Not Available	1153	Open in IMG/M
3300010360\|Ga0126372_10821094	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	923	Open in IMG/M
3300010360\|Ga0126372_12058525	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	618	Open in IMG/M
3300010360\|Ga0126372_12612205	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	556	Open in IMG/M
3300010361\|Ga0126378_10754526	Not Available	1084	Open in IMG/M
3300010361\|Ga0126378_11115727	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	889	Open in IMG/M
3300010361\|Ga0126378_13118000	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	528	Open in IMG/M
3300010362\|Ga0126377_10578992	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300010376\|Ga0126381_100106487	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3594	Open in IMG/M
3300010376\|Ga0126381_100115748	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium gephyra	3458	Open in IMG/M
3300010376\|Ga0126381_100167673	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium gephyra	2903	Open in IMG/M
3300010376\|Ga0126381_100682514	Not Available	1468	Open in IMG/M
3300010376\|Ga0126381_101378554	Not Available	1019	Open in IMG/M
3300010398\|Ga0126383_10180737	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	2004	Open in IMG/M
3300011107\|Ga0151490_1378344	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1031	Open in IMG/M
3300012515\|Ga0157338_1067558	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	551	Open in IMG/M
3300012931\|Ga0153915_11460449	Not Available	799	Open in IMG/M
3300012971\|Ga0126369_10822148	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1012	Open in IMG/M
3300012971\|Ga0126369_11907976	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	682	Open in IMG/M
3300012989\|Ga0164305_12032279	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	525	Open in IMG/M
3300014497\|Ga0182008_10943242	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	511	Open in IMG/M
3300015371\|Ga0132258_10000559	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	57433	Open in IMG/M
3300015371\|Ga0132258_10052477	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	9339	Open in IMG/M
3300015372\|Ga0132256_100051148	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3841	Open in IMG/M
3300016357\|Ga0182032_10567857	Not Available	940	Open in IMG/M
3300016387\|Ga0182040_11967806	Not Available	502	Open in IMG/M
3300017947\|Ga0187785_10584050	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	571	Open in IMG/M
3300017966\|Ga0187776_11130271	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	583	Open in IMG/M
3300018032\|Ga0187788_10061393	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1297	Open in IMG/M
3300021445\|Ga0182009_10206525	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	958	Open in IMG/M
3300021560\|Ga0126371_12515048	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	623	Open in IMG/M
3300025461\|Ga0208851_1000691	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	13577	Open in IMG/M
3300025711\|Ga0207696_1180906	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	557	Open in IMG/M
3300025906\|Ga0207699_10748400	Not Available	717	Open in IMG/M
3300025931\|Ga0207644_10195306	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1593	Open in IMG/M
3300025945\|Ga0207679_10000893	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	19016	Open in IMG/M
3300025945\|Ga0207679_10662287	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	945	Open in IMG/M
3300027743\|Ga0209593_10014568	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	3223	Open in IMG/M
3300031538\|Ga0310888_10187158	Not Available	1130	Open in IMG/M
3300031543\|Ga0318516_10177826	Not Available	1225	Open in IMG/M
3300031543\|Ga0318516_10288477	Not Available	948	Open in IMG/M
3300031547\|Ga0310887_10887746	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	564	Open in IMG/M
3300031549\|Ga0318571_10306843	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	598	Open in IMG/M
3300031640\|Ga0318555_10147009	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300031681\|Ga0318572_10143278	Not Available	1377	Open in IMG/M
3300031723\|Ga0318493_10367174	Not Available	784	Open in IMG/M
3300031723\|Ga0318493_10880958	Not Available	506	Open in IMG/M
3300031748\|Ga0318492_10322299	Not Available	806	Open in IMG/M
3300031764\|Ga0318535_10440679	Not Available	580	Open in IMG/M
3300031765\|Ga0318554_10784892	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	533	Open in IMG/M
3300031770\|Ga0318521_10084730	All Organisms → cellular organisms → Bacteria → Proteobacteria	1717	Open in IMG/M
3300031799\|Ga0318565_10394343	Not Available	671	Open in IMG/M
3300031831\|Ga0318564_10444591	Not Available	565	Open in IMG/M
3300031845\|Ga0318511_10201713	Not Available	884	Open in IMG/M
3300031890\|Ga0306925_11758312	Not Available	596	Open in IMG/M
3300031893\|Ga0318536_10024647	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	2769	Open in IMG/M
3300031896\|Ga0318551_10626233	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	621	Open in IMG/M
3300031912\|Ga0306921_11042553	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	920	Open in IMG/M
3300031942\|Ga0310916_10957580	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	716	Open in IMG/M
3300032001\|Ga0306922_11292987	Not Available	738	Open in IMG/M
3300032009\|Ga0318563_10115408	Not Available	1427	Open in IMG/M
3300032043\|Ga0318556_10381233	Not Available	738	Open in IMG/M
3300032044\|Ga0318558_10169883	Not Available	1056	Open in IMG/M
3300032054\|Ga0318570_10256885	Not Available	792	Open in IMG/M
3300032060\|Ga0318505_10021545	All Organisms → cellular organisms → Bacteria → Proteobacteria	2521	Open in IMG/M
3300032066\|Ga0318514_10505049	Not Available	643	Open in IMG/M
3300032261\|Ga0306920_102717387	Not Available	676	Open in IMG/M
3300032770\|Ga0335085_10349281	Not Available	1734	Open in IMG/M
3300032782\|Ga0335082_10148551	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	2272	Open in IMG/M
3300032782\|Ga0335082_10203782	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1877	Open in IMG/M
3300032782\|Ga0335082_10444285	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1160	Open in IMG/M
3300032782\|Ga0335082_10515091	Not Available	1058	Open in IMG/M
3300032783\|Ga0335079_10240704	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1993	Open in IMG/M
3300032893\|Ga0335069_10845822	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300032893\|Ga0335069_11586969	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	701	Open in IMG/M
3300033004\|Ga0335084_10009633	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	9652	Open in IMG/M
3300033004\|Ga0335084_10010336	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	9355	Open in IMG/M
3300033433\|Ga0326726_10046625	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	3788	Open in IMG/M
3300033480\|Ga0316620_10008254	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	5434	Open in IMG/M
3300033513\|Ga0316628_100034753	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	5002	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.86%
Host-Associated	Host-Associated	21.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.42%
Plants	Host-Associated → Plants	21.14%
Aquatic	Environmental → Aquatic	2.44%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.69%
Freshwater	Environmental → Aquatic → Freshwater	2.44%
Roots	Host-Associated → Plants → Roots	1.63%
Peat	Environmental → Terrestrial → Peat	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.47%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.20%
Loam	Environmental → Terrestrial → Soil → Loam	8.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.44%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.63%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.63%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.58%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.58%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.25%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.44%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.44%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.63%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.63%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.63%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.81%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	9.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.44%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.44%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.44%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.63%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.63%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.63%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.81%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002239	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2	Host-Associated	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025461	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025711	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MBSR1b_0353.00002070	2162886012	Miscanthus Rhizosphere	VGVVALLLPGGLLFLIGWVLVRALARASVRLREEMRAAGETGGVWQAVSTLSFRDVLREARATL
ICChiseqgaiiFebDRAFT_142428901	3300000363	Soil	MSRGVKTGLGLVALLLPGGLLFLVGWVLVRALARARSRIRQEPVSSGEPSGVWQAVSSVSFRDVLREARAAF*
INPhiseqgaiiFebDRAFT_1020175412	3300000364	Soil	VRSRGVKTGLGLVALVLPGGLLFLIGWVLVRAMARASARIRQEEPSSSDAPAHLWQVVSRLSFREVLREARGAL*
INPhiseqgaiiFebDRAFT_1020184171	3300000364	Soil	VSWRGLKTWLGILALLLPGGLLLLMGWVLVRALARVSARVREEMGSPGESSGVWQVVSNLSFRDVL
JGI24034J26672_100476982	3300002239	Corn, Switchgrass And Miscanthus Rhizosphere	ANVRSRGLKTGVGVVALLLPGGLLFLIGWVLVRALARASVRLREEMRAAGETGGVWQAVSTLSFRDVLREARATL*
JGI25404J52841_100195651	3300003659	Tabebuia Heterophylla Rhizosphere	VRSRGLKTGLGLVALLLPGGLLFLIGWVLLRALARASARIRGETRPSFELGRMWQAVSSLSFRDVLREARAGL*
Ga0062595_1005221222	3300004479	Soil	VRSRGLKTGVGVVALLLPGGLLFLIGWVLVRALARASVRLREEMRAAGETGGVWQAVSTLRFRDVLREARATL*
Ga0062595_1006570251	3300004479	Soil	LLLPGGLLFLMGWVLVRALARASVRLREETRSPGEPSGVWQVVSPLSLRDVLDEARTPL*
Ga0066395_107993091	3300004633	Tropical Forest Soil	MSRGVKTGLGMAALVLPGGLLLLIGWVLVRALARVTARIRSEPRFQAETNHLWDVVSRLSFRDVLREARTAL*
Ga0062594_1000000179	3300005093	Soil	VRSRGLKTGVGVVALLLPGGLLFLIGWVLVRALARASVRLREEMRAAGETGGVWQAVSTLSFRDVLREARATL*
Ga0066388_1005739392	3300005332	Tropical Forest Soil	VSWRGLKTWLGILALLLPGGLLLLMGWVLVRALARVTARVREEMGSPGESTGVWQVVSNLSFRDVLREARAGF*
Ga0066388_1029909041	3300005332	Tropical Forest Soil	VRSRGVKTGLGLVALLLPGGLLFLIGWVLVRALARVNARLHEEGGEPGEPARLWEAVSRLSFREVLREARAAL*
Ga0066388_1046223942	3300005332	Tropical Forest Soil	MSRGLKTGLGVLALLLPGGLLFLMGWLLVRAAAQVSARLREETRSSGEPSGAWQVVSNLSFRDVLREARA
Ga0070682_1001455812	3300005337	Corn Rhizosphere	GVGVVALLLPGGLLFLIGWVLVRALARASVRLREEMRAAGETGGVWQAVSTLSFRDVLREARATL*
Ga0070671_1004494592	3300005355	Switchgrass Rhizosphere	VQDVRSRGLKTGLGVVALLLPGGLLFLIGWVLVRALARAAVRLREETRSMGEPTGVWQVVSTLSVRDVLREAKATL*
Ga0070700_1002513671	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	TGVGVVALLLPGGLLFLIGWVLVRALARASVRLREEMRAAGETGGVWQAVSTLSFRDVLREARATL*
Ga0070681_102684223	3300005458	Corn Rhizosphere	VRSRGLKTGLGVVALLLPGGLLFLIGWVLVRTLARASIRLREQTRSPGEPGGVWQVVSALSFRDVLREARATL*
Ga0070693_1000174581	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	GLKTGVGVVALLLPGGLLFLIGWVLVRALARASVRLREEMRAAGETGGVWQAVSTLSFRDVLREARATL*
Ga0070664_10000023413	3300005564	Corn Rhizosphere	MSRGVKTGLGLVALLLPGGLLFLVGWVLVRALARARARIRQEPVSSVEPSGVWQAVSGLSFRDVLREVRTAL*
Ga0066903_1000095822	3300005764	Tropical Forest Soil	MSRGVKTGLGMAALVLPGALLLLIGWVLVRALARVTARIRSEPRFQAETNHLWDVVSRLSFRDVLREARTAL*
Ga0066903_1001576912	3300005764	Tropical Forest Soil	MSRGIKTGLGVAALVLPGGLLLLIGWVLVRAVARVTARIRSEPTFSAGTHRLWDVVSRLSFRDVLQEARAAL*
Ga0081540_100002948	3300005983	Tabebuia Heterophylla Rhizosphere	VTSRCVKTGLGLLALLLPGGLLFLLGWVLVRAVARAWARVRQAPVSTGAPGDGWQAVFGLAFRDVLRETRAAL*
Ga0097621_1002342722	3300006237	Miscanthus Rhizosphere	LKTGLGVVALLLPGGLLFLIGWVLVRGLARASVRLREQTRSPGEPGGAWQVVSALSFRDVLREARATL*
Ga0068871_1003342682	3300006358	Miscanthus Rhizosphere	VRSRALKTGLGVVALLLPGGLLFLIGWVLVRGLARASVRLREQTRSPGEPGGAWQVVSALSFRDVLREARATL*
Ga0074056_116811502	3300006574	Soil	LGVVALLLPGGLLFLMGWVLVRALARASVRLREETCSPGEPSGVWQVVSTLSLRDVLDEARTPL*
Ga0074053_118561602	3300006575	Soil	VRSRGVKTGLGVVALLLPGGLLFLMGWVLVRALARASVRLREETRSVGEPSGVWQVVSTLSFRDVLDEARTTL*
Ga0074054_119255331	3300006579	Soil	LGVVALLLPGGLLFLMGWVLVRALARASVRLREETRSPGEPSGVWQVVSTLSLRDVLDEARTPL
Ga0074057_123104413	3300006605	Soil	LGVVALLLPGGLLFLMGWVLVRALARASVRLREETRSPGEPSGVWQVVSTLSLRDVLDEARTPL*
Ga0075425_1008144081	3300006854	Populus Rhizosphere	NVRSRGLKAGLGLVALLLPGGLLFLIGWVLLRALARASARIRGEKGPSFELRRMWEAVSSLSFRDVLREARAGL*
Ga0075425_1019916821	3300006854	Populus Rhizosphere	VRSGALKTGLGVVALLLPGGLLFLIGWVLVRGLARASVRLREQTRSPGEPGGAWQVVSALSFRDVLREARATL*
Ga0075424_1006711471	3300006904	Populus Rhizosphere	VALLLPGGLLFLIGWVLVRALARASVRLREEMRAAGETGGVWQAVSTLSFRDVLREARATL*
Ga0075435_1006962392	3300007076	Populus Rhizosphere	VRSRGLKAGLGLVALLLPGGLLFLIGWVLLRALARASARIRGEKGPSFELRRMWEAVSSLSFRDVLREARAGL
Ga0105250_104877162	3300009092	Switchgrass Rhizosphere	VVALLLPGGLLFLIGWVLVRALARASVRLREEMRAAGETGGVWQAVSTLSFRDVLREA
Ga0105240_1000083115	3300009093	Corn Rhizosphere	VGVVALLLPGGLLFLIGWVLVRALARASVRLREEMRAAGETGGVWQAVSTLSFRDVLREARATL*
Ga0075423_119104732	3300009162	Populus Rhizosphere	VVALLLPGGLLFLIGWVLVRALARASVRLREEMRAAGETGGVWQAVSTLSFRDVLREARA
Ga0105104_1000010234	3300009168	Freshwater Sediment	MGLGLVALLLPGGLLFLVGWVLVRALARARTRVRQEPVSPGEPSGVWQAVSSLSFRDVLREARAAL*
Ga0105241_108827501	3300009174	Corn Rhizosphere	VRSRALKTGLGVVALLLPGGLLFLIGWVLVRGLARASVRLREQTRSPGEPGGAWQVVSALSFRDGLREARATL*
Ga0105242_100147493	3300009176	Miscanthus Rhizosphere	VVALLLPGGLLFLIGWVLVRALARASVRLREEMRAAGETGGVWQAVSTLSFRDVLREARATL*
Ga0126374_110401451	3300009792	Tropical Forest Soil	MSRGLKTGLGLVALLLPGGLLFLFGWVVVRALARARTRIRQDLVSPGESDGVWQAVASVSFRDVLAEARAAL*
Ga0126384_104181071	3300010046	Tropical Forest Soil	VSWRGLKTVLGVVALLLPGGILFLMGWVLVRALARATVRLREESSPGDTSGVWQVVSNLSFRDVLAEARAAL*
Ga0126384_117826822	3300010046	Tropical Forest Soil	LKTGLGLLALLLPGGLLFLIGWVLLRALARASARIRGETGPSFELGRMWQALSTLSFRDVLR
Ga0126373_108388812	3300010048	Tropical Forest Soil	VSWRGVKTVLGVVALLLPGGLILLMGWVLLRALARANLRLREQSSPGDTGGVWQVVSNLSFRDVLAEARAAL*
Ga0126376_115731661	3300010359	Tropical Forest Soil	VSWRGLKTWLGILALLLPGGLLLLMGWVLVRALARVTARVREEMGSPGESSGVWQVVSNLSFRDVLAEARAAL*
Ga0126372_104879642	3300010360	Tropical Forest Soil	MSRGLKTGLGVLALLLPGGLLFLMGWLLVRAAAQVSARLREETRSSGEPSGAWQVVSNLSFRDVLREARAAL*
Ga0126372_108210942	3300010360	Tropical Forest Soil	VSWRGLKTVLGVVALLLPGGILFLMGWVLVRALARATVRLREASSPGDTSGVWQVVSNLSFRDVLAEARAAL*
Ga0126372_120585252	3300010360	Tropical Forest Soil	MSRGLKTGLGVLALLLPGGLLFLMGWLLVRAVARVSARLREETRASGEPSGVWQVLASLSFRDVLREARAAL*
Ga0126372_126122052	3300010360	Tropical Forest Soil	LALLLPGGLLLLMGWVLVRTLARVTARVREEMGSPGESTGVWQVVSNLSFRDVLREARAGF*
Ga0126378_107545261	3300010361	Tropical Forest Soil	VALLLPGGLLFLIGWVLVRAVARVNARLHEESRVPGEPARLWQAVSRLSFRDVLREARAAL*
Ga0126378_111157272	3300010361	Tropical Forest Soil	VSWRGLKTVLGVVALLLPGGILVLMGWVLVRALARATVRLREESSPGDTSGVWQVVSNLSFRDVLAEARAAL*
Ga0126378_131180001	3300010361	Tropical Forest Soil	GLGVAALVLPGGLLFLIGWVLVRAVARVTARIRSEPTFSSGTHRLWDVVSRLSFRDVLQEARTAL*
Ga0126377_105789922	3300010362	Tropical Forest Soil	VRSRGVKTGLGLVALLLPGGLLFLIGWVLVRALARANARLHEEGGEPGEPARLWEAVSRLSFREVLREARAAL*
Ga0126381_1001064872	3300010376	Tropical Forest Soil	MSRGIKTGLGVAALVLPGGLVFLIGWVLVRAVARVTARIRSEPTFSSGTHRLWDVVSRLSFRDVLQEARTAL*
Ga0126381_1001157482	3300010376	Tropical Forest Soil	VTSRGLKTGLGVLALLLPGGLLLLMGWLLVRALARVTARLREETRSSGEPSGVWRVLSSLSFRDVLAEARAVL*
Ga0126381_1001676733	3300010376	Tropical Forest Soil	VLALLLPGGLLLLMGWLLVRALARVTVRLREETRTSGEPTGVWRVLSNLSFRDVLAEARAAL*
Ga0126381_1006825141	3300010376	Tropical Forest Soil	VTSRGLKTGLGLLALLLPGGLLVLMGWLLLRALARVTVRLREETRTSGEPTGVWQVLSGLSFRDVLHEARTAL*
Ga0126381_1013785542	3300010376	Tropical Forest Soil	MKTGLGLAALVLPGGLLFLIGWVLVRALARVTARIRSEATFSGDTGHLWDVLSRLSFRDVLQEARAAL*
Ga0126383_101807372	3300010398	Tropical Forest Soil	VSWRGLKTVLGVVALLLPGGILFLMGWVLVRALARATVRLREGSSPGDTSGVWQVVSNLSFRDVLAEARAAL*
Ga0151490_13783442	3300011107	Soil	VRSRGVKTGLGVVALLLPGGLLLLLGWVLVRALARASLRLREETRSVGEPSGVWQVVSTLSFRDVLREAWAAL*
Ga0157338_10675582	3300012515	Arabidopsis Rhizosphere	VRSGALKTGLGVVALLLPGGLLFLIGWVLVRGLARASVRLREQTRSPGEPGGVWQVVSALSF
Ga0153915_114604492	3300012931	Freshwater Wetlands	VRSCGVKTGLGLVALLLPGGILLLAGWVLARALARARARVSSERSSTGEPPRVWQVVSRLSVREVLREARAAM*
Ga0126369_108221481	3300012971	Tropical Forest Soil	IVMSRGIKTGLGVAALVLPGGLLLLIGWVLVRAVARVTARIRSEPTFSAGTHRLWDVVSRLSFRDVLQEARAAL*
Ga0126369_119079762	3300012971	Tropical Forest Soil	MLPGGLLFLIGWVLVRALARATARIRSEARFAAENGHLWDVVSQLSFRDVLREARAAL*
Ga0164305_120322791	3300012989	Soil	VGVVALLLPGGLLFLIGWVLVRALARASVRLREEMRAAGETGGVWQAVSTLSFRDVLREA
Ga0182008_109432421	3300014497	Rhizosphere	VVALLLPGGLLFLIGWVLVRALARASVRLREEMRAAGESGGVWQAVSTLSFRDVLREARATL*
Ga0132258_1000055929	3300015371	Arabidopsis Rhizosphere	VRSGALKTGLGVVALLLPGGLLFLIGWVLVRGLARASVRLREQTRSPGEPGGVWQVVSALSFRDVLREARATL*
Ga0132258_100524776	3300015371	Arabidopsis Rhizosphere	MSRGQKTGLGVLALLLPGGLLFLMGWLLVRALARVSARLREETRTSGEPTGVWQVLSNLSLRDVLQEARGAL*
Ga0132256_1000511481	3300015372	Arabidopsis Rhizosphere	VRSGALKTGLGVVALLLPGGLLFLIGWVLVRGLARASVRLREQTRSPGEPGGVWQVVSALSFRDV
Ga0182032_105678571	3300016357	Soil	VSWRGLKTWLGVVVLLVTGGLLILLGWMLVRALARATARLRETRSLSDTSGVWQVVSSLSVRDVLREARAGL
Ga0182040_119678061	3300016387	Soil	VSWRGLKTWLGVVALLLPGGLLILLGWVLVRALARASARLRETGSPGDTSGVWQVVSSLSVRDVLREARAGL
Ga0187785_105840501	3300017947	Tropical Peatland	MKTGLGLVALVLPGGLLFLLGWVVVRALARARARIAAEAGPFGWASRSWQLLSGLSFRDVLREARAAL
Ga0187776_111302711	3300017966	Tropical Peatland	SKRIDGAGPDPGRGDIVTSRGVKTGLGLLALLLPGGLLFLIGWVLVRALARATARIRSDASFPADGGHLRDLVARLSFRDVLREARAAL
Ga0187788_100613932	3300018032	Tropical Peatland	MGRDGVNVRSRAMKTGLGLVALVLPGGLLFLLGWVVVRALARARARIAAEAGPSGWVSRSGQLLSGLSFRDVLREARAAL
Ga0182009_102065252	3300021445	Soil	VRSRGLKTGVGVVALLLPGGLLFLIGWVLVRALARASVRLREEMRAAGETGGVWQAVSTLRFRDVLREARATL
Ga0126371_125150481	3300021560	Tropical Forest Soil	LKTGLGLVALLLPGGLLCLIGWVLVRALARASARIRGETTPSFELGRMWQAVTSLRFRDVLREARAGL
Ga0208851_10006914	3300025461	Arctic Peat Soil	VTSRGVKTGLGVLALLLPGGLVFLVGWVLVRALSRARARLDAEAEDGSARTPVWQLMSRLSFRDVLQEARAAL
Ga0207696_11809062	3300025711	Switchgrass Rhizosphere	VALLLPGGLLFLIGWVLVRALARASVRLREEMRAAGETGGVWQAVSTLSFRDVLREA
Ga0207699_107484001	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VALLLPGGLLFLIGWVLVRALARASVRLREEMRAAGETGGVWQAVSTLSFRDVLREARA
Ga0207644_101953062	3300025931	Switchgrass Rhizosphere	VQDVRSRGLKTGLGVVALLLPGGLLFLIGWVLVRALARAAVRLREETRSMGEPTGVWQVVSTLSVRDVLREAKATL
Ga0207679_1000089316	3300025945	Corn Rhizosphere	MSRGVKTGLGLVALLLPGGLLFLVGWVLVRALARARARIRQEPVSSVEPSGVWQAVSGLSFRDVLREVRTAL
Ga0207679_106622872	3300025945	Corn Rhizosphere	VVALLLPGGLLFLIGWVLVRTLARASIRLREQTRSPGEPGGVWQVVSALSFRDVLREARATL
Ga0209593_100145682	3300027743	Freshwater Sediment	MQGGDGPGPGALRGANVRSRGVRMGLGLVALLLPGGLLFLVGWVLVRALARARTRVRQEPVSPGEPSGVWQAVSSLSFRDVLREARAAL
Ga0310888_101871582	3300031538	Soil	MSRGQKTGLGVLALLLPGGLLFLMGWLLVRALARVSARLREETRTSGEPTGVWQVLSNLS
Ga0318516_101778261	3300031543	Soil	VSWRGLKTWLGVVALLLPGGLLILLGWVLVRALARASARLRETGSPGDTSGVWQVVSNLSVRDVLREARAGF
Ga0318516_102884772	3300031543	Soil	VSWRGLKTWLGVVVLLVPGGLLILLGWVLVRALARATARLRETRSLSDTSGVWQVVSSLSVRDVLREARAGL
Ga0310887_108877462	3300031547	Soil	MSRGQKTGLGVLALLLPGGLLFLMGWLLVRALARVSARLREETRTSGEPTGVWQVLSNLSLRDVLQEARGAL
Ga0318571_103068432	3300031549	Soil	MSRGMKTGLGVAALVLPGGLLFLIGWVLVRALARVTARIRSEATFSGDTGQLWDVLSRLSFRDVLQEARAAL
Ga0318555_101470091	3300031640	Soil	VRSRRLKTVLGLVALLLPGGLLFLIGWVLVRALARVNARLHEEGPVPGEPARLWQAVSSLSFRDVLREARAAL
Ga0318572_101432782	3300031681	Soil	VSWRGLKTWLGVVVLLVPGGLLILLGWMLVRALARATARLRETRSLSDTSGVWQVVSSLSVRDVLREARAGL
Ga0318493_103671742	3300031723	Soil	LKTGLGLVALLLPGGLLFLIGWVLVRALARASARIRGETAPSFELGRMWRALSSLSFREVLREARAGL
Ga0318493_108809581	3300031723	Soil	PGGLLILLGWMLVRALARATARLRETRSLSDTSGVWQVVSSLSVRDVLREARAGL
Ga0318492_103222991	3300031748	Soil	VRSRGLKTGLGLVALLLPGGLLFLIGWVLVRALARASARIRGETAPSFELGRMWRALSSL
Ga0318535_104406791	3300031764	Soil	PGGLLILLGWVLVRALARATARLRETRSLSDTSGVWQVVSSLSVRDVLREARAGL
Ga0318554_107848922	3300031765	Soil	VLALLLPGGLLLLMGWLLVRALARVTVRLREETRTSGEPNGMWRVVSSLSFSDVLREARAAL
Ga0318521_100847301	3300031770	Soil	KTWLGVVALLLPGGLLILLGWVLVRALARASARLRETGSPGDTSGVWQVVSNLSVRDVLREARAGV
Ga0318565_103943431	3300031799	Soil	LVPGGLLILLGWVLVRALARATARLRETRSLSDTSGVWQVVSSLSVRDVLREARAGL
Ga0318564_104445911	3300031831	Soil	GVVVLLVPGGLLILLGWVLVRALARATARLRETRSLSDTSGVWQVVSSLSVRDVLREARAGL
Ga0318511_102017131	3300031845	Soil	VSWRGLKTWLGVVVLLVPGGLLILLGWVLVRALARATSRLRETRSPSDTSGVWQVVSSLSVRDVLREARAGF
Ga0306925_117583121	3300031890	Soil	KTWLGAVVLLVPGGFLILLGWVLVRALARATSRLRETRSPSDTSGVWQVVSSLSVRDVLREARAGF
Ga0318536_100246471	3300031893	Soil	VSWRGLKTWLGVVVLLVPGGLLILLGWVLVRALARATARLRETRSLSDTSGVWQVVSSLSVRDVLREARAGF
Ga0318551_106262331	3300031896	Soil	VRSRGLKTGLGLVALLLPGGLLFLIGWVLVRALARASARIRGETAPSFELGRMWRALSSLSFREVLREARAGL
Ga0306921_110425531	3300031912	Soil	SEPGRGSGRGGHVRSRRLKTVLGLVALLLPGGLLFLIGWVLVRALARVNARLHEEGPVPGEPARLWQAVSSLSFRDVLREARAAL
Ga0310916_109575801	3300031942	Soil	VALLLPGGLLFLIGWVLVRALARASARIRGETAPSFELGRMWRALSSLSFREVLREARAG
Ga0306922_112929872	3300032001	Soil	VSWRGLKTWLGVVVLLVPGGLLILLGWVLVRALARATARLRETRSLSDTSGVWQVVSSLSVRDVLREA
Ga0318563_101154081	3300032009	Soil	VSWRVVRTVLGVVALLLPGGFILLMGWVLLRALARANIRLREQTRSPGESSGVWQVVSTL
Ga0318556_103812331	3300032043	Soil	VSWRGLKTWLGVVALLLPGGLLILLGWVLVRALARATARLRETRSLSDTSGVWQVVSNLSVRDVLREARAGF
Ga0318558_101698832	3300032044	Soil	VSWRGLKTWLGAVVLLVPGGFLILLGWVLVRALARATSRLRETRSPSDTSGVWQVVSSLSVRDVLREARAGF
Ga0318570_102568852	3300032054	Soil	AVVLLVPGGFLILLGWVLVRALARATSRLRETRSPSDTSGVWQVVSSLSVRDVLREARAG
Ga0318505_100215453	3300032060	Soil	VSWRGLKTWLGVVVLLVPGGLLILLGWVLVRALARATARLRETRSLSDTSGVWQVVSNLSVRDVLREARAGF
Ga0318514_105050491	3300032066	Soil	VSWRGLKTWLGAVVLLVPGGFLILLGWVLVRALARATSRLRETRSPSDTSGVWQVVSSLSVRDVLREARA
Ga0306920_1027173871	3300032261	Soil	VLALLLPGGLLLLMGWLLVRALARVTVRLREETRTPGESTGVWQVLSNLSFRDVLREARAAL
Ga0335085_103492812	3300032770	Soil	VRSRGLKAGLGVVALLLPGGLLFLIGCVLVRALARASIRLREQTRSPGEPGGVWRVVSALSFRDVLREARATL
Ga0335082_101485512	3300032782	Soil	VRSRGVKTGLGLVALLLPGGLLFLIGWVLVRALARASARVRQETRSPGQRAHVWQVVSSLSFRDVLREARAAL
Ga0335082_102037822	3300032782	Soil	VRSHRVRTGLGLVALLLPGGLLVLIGWVLVRALKRANARIRQETTSPAEPAQVWQALSSLSFRDVVGEARAAL
Ga0335082_104442852	3300032782	Soil	VRSRGLKTVLGLVALLLPGGLLLLIGWVLVRAVARASARIRQETVRPGETGRVWQLSFRELMREARASL
Ga0335082_105150912	3300032782	Soil	MKMVLGLVAMVLPGGLLFLLGWVVVRALARARARLASDVRESGWPSRSWQMLSTLSFREVLREARA
Ga0335079_102407043	3300032783	Soil	VTSRGVKTGLGLLALLLPGGLLLLIGWVLVRALARATARIRSDASFPAEGGHLRDLVGRLSFRDVLREARAAL
Ga0335069_108458222	3300032893	Soil	VRSRAVKTGAGLVALLLPGGLLFLVGWVLVRALARARTRLREESSVPGGRAPVWQVFSQLSFREVLREARAAL
Ga0335069_115869692	3300032893	Soil	PDPGRGDIVTSRGVKTGLGLLALLLPGGLLLLIGWVLVRALARATARIRSDASFPAEGGHLRDLVRRLSFRDVLREARAAL
Ga0335084_100096336	3300033004	Soil	MKMVLGLVAMVLPGGLLFLLGWVVVRALARARARLASDVRESGWPSRSWQMLSTLSFREVLREARAAL
Ga0335084_100103365	3300033004	Soil	VRSHRVRTGLGLVALLLPGGLLVLIGWVLVRALKRANARIRQETTSPAEPAQVWQALSSLSFRDVVREARAAL
Ga0326726_100466252	3300033433	Peat Soil	VRSRGVKTGLGLVALVLPGGLFFLIGWVLVRALARATARIRSEARFPAEPGRVWDVLAQLSFRDVLREARAAL
Ga0316620_100082543	3300033480	Soil	VRGCGVKTGLGLVALLLPGGILLLAGWVLARALARARARVGSERSPTGEPPRVWQVVSRLSVREVLREARAAM
Ga0316628_1000347533	3300033513	Soil	VRSCGVKTGLGLVALLLPGGILLLAGWVLARALARARARVSSERSPTGEPPRVWQVVSRLSVREVLREARAAM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070245

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences