Metagenome Family F070182

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070182
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	65 residues
Representative Sequence	MDKRVGHGPLGRDQKPPTERGVVDLADARVRIRSRTKPTHESLMRELDEIRSLLDQGLSTEAK
Number of Associated Samples	103
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	93.44 %
% of genes near scaffold ends (potentially truncated)	96.75 %
% of genes from short scaffolds (< 2000 bps)	95.12 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.748 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (9.756 % of family members)
Environment Ontology (ENVO)	Unclassified (45.528 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (69.919 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.26% β-sheet: 0.00% Coil/Unstructured: 63.74%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF02881	SRP54_N	53.66
PF02978	SRP_SPB	2.44
PF08241	Methyltransf_11	0.81
PF13564	DoxX_2	0.81
PF13432	TPR_16	0.81
PF09992	NAGPA	0.81
PF13083	KH_4	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0541	Signal recognition particle GTPase	Intracellular trafficking, secretion, and vesicular transport [U]	2.44

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.75 %
Unclassified	root	N/A	3.25 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.75 %
Unclassified	root	N/A	3.25 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.75 %
Unclassified	root	N/A	3.25 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	86.99 %
Unclassified	root	N/A	3.25 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	52.85 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	5.69 %
Unclassified	root	N/A	3.25 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.85 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	5.69 %
Unclassified	root	N/A	3.25 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.85 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	5.69 %
Unclassified	root	N/A	3.25 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.85 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	4.88 %
Unclassified	root	N/A	3.25 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.85 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	4.88 %
Unclassified	root	N/A	3.25 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001431\|F14TB_105766940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300004480\|Ga0062592_102484506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300005238\|Ga0073692_1038951	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300005293\|Ga0065715_10843594	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300005294\|Ga0065705_10005817	All Organisms → cellular organisms → Bacteria → Acidobacteria	4553	Open in IMG/M
3300005294\|Ga0065705_10382309	All Organisms → cellular organisms → Bacteria → Acidobacteria	908	Open in IMG/M
3300005294\|Ga0065705_10535221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300005295\|Ga0065707_10041501	All Organisms → cellular organisms → Bacteria → Acidobacteria	786	Open in IMG/M
3300005330\|Ga0070690_100978170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300005331\|Ga0070670_100310652	All Organisms → cellular organisms → Bacteria → Acidobacteria	1380	Open in IMG/M
3300005331\|Ga0070670_101931364	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300005338\|Ga0068868_100797212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	852	Open in IMG/M
3300005338\|Ga0068868_101434723	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300005338\|Ga0068868_101741848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300005339\|Ga0070660_100756875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	816	Open in IMG/M
3300005339\|Ga0070660_100873459	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300005340\|Ga0070689_101469085	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300005340\|Ga0070689_101680628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300005345\|Ga0070692_10244711	All Organisms → cellular organisms → Bacteria → Acidobacteria	1070	Open in IMG/M
3300005345\|Ga0070692_10591552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300005354\|Ga0070675_101236218	All Organisms → cellular organisms → Bacteria → Acidobacteria	688	Open in IMG/M
3300005456\|Ga0070678_101128514	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	725	Open in IMG/M
3300005468\|Ga0070707_101671194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300005518\|Ga0070699_101917735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300005536\|Ga0070697_100073641	All Organisms → cellular organisms → Bacteria	2805	Open in IMG/M
3300005536\|Ga0070697_101986165	Not Available	521	Open in IMG/M
3300005539\|Ga0068853_101744046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300005544\|Ga0070686_100962328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300005545\|Ga0070695_101905716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300005547\|Ga0070693_101169138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300005549\|Ga0070704_101671993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300005563\|Ga0068855_101498170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300005564\|Ga0070664_100733195	All Organisms → cellular organisms → Bacteria → Acidobacteria	922	Open in IMG/M
3300005564\|Ga0070664_101975408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300005577\|Ga0068857_102198770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300005615\|Ga0070702_100184607	All Organisms → cellular organisms → Bacteria → Acidobacteria	1367	Open in IMG/M
3300005615\|Ga0070702_100843343	All Organisms → cellular organisms → Bacteria → Acidobacteria	712	Open in IMG/M
3300005719\|Ga0068861_100303087	All Organisms → cellular organisms → Bacteria → Acidobacteria	1385	Open in IMG/M
3300005841\|Ga0068863_100887362	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300005842\|Ga0068858_100132647	All Organisms → cellular organisms → Bacteria	2336	Open in IMG/M
3300005842\|Ga0068858_102299316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300005843\|Ga0068860_100619488	All Organisms → cellular organisms → Bacteria → Acidobacteria	1089	Open in IMG/M
3300005884\|Ga0075291_1012769	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300005887\|Ga0075292_1037913	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300006358\|Ga0068871_100472643	All Organisms → cellular organisms → Bacteria → Acidobacteria	1127	Open in IMG/M
3300006755\|Ga0079222_10803147	All Organisms → cellular organisms → Bacteria → Acidobacteria	768	Open in IMG/M
3300006845\|Ga0075421_102696626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300006852\|Ga0075433_10104986	All Organisms → cellular organisms → Bacteria	2503	Open in IMG/M
3300006853\|Ga0075420_101770143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300006853\|Ga0075420_101888136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300006871\|Ga0075434_101311217	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	735	Open in IMG/M
3300006954\|Ga0079219_12037074	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300009101\|Ga0105247_10932169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300009148\|Ga0105243_12132057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300009162\|Ga0075423_12687011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300009174\|Ga0105241_12270053	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300009551\|Ga0105238_10524530	All Organisms → cellular organisms → Bacteria → Acidobacteria	1187	Open in IMG/M
3300009609\|Ga0105347_1205714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	793	Open in IMG/M
3300010036\|Ga0126305_10594128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300010037\|Ga0126304_10230514	All Organisms → cellular organisms → Bacteria → Acidobacteria	1215	Open in IMG/M
3300010042\|Ga0126314_10264016	All Organisms → cellular organisms → Bacteria → Acidobacteria	1223	Open in IMG/M
3300010042\|Ga0126314_11325510	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300010362\|Ga0126377_10833082	All Organisms → cellular organisms → Bacteria → Acidobacteria	982	Open in IMG/M
3300010375\|Ga0105239_10699369	All Organisms → cellular organisms → Bacteria → Acidobacteria	1159	Open in IMG/M
3300010397\|Ga0134124_12275581	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300010397\|Ga0134124_12483662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300010400\|Ga0134122_12060939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300012205\|Ga0137362_10486608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1067	Open in IMG/M
3300012208\|Ga0137376_10654081	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300012955\|Ga0164298_11387021	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300012957\|Ga0164303_10218804	All Organisms → cellular organisms → Bacteria → Acidobacteria	1068	Open in IMG/M
3300012958\|Ga0164299_10426447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	860	Open in IMG/M
3300012960\|Ga0164301_10547382	All Organisms → cellular organisms → Bacteria → Acidobacteria	844	Open in IMG/M
3300012961\|Ga0164302_10796919	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300012986\|Ga0164304_10559914	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	846	Open in IMG/M
3300012989\|Ga0164305_11190904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300013102\|Ga0157371_10668966	All Organisms → cellular organisms → Bacteria → Acidobacteria	776	Open in IMG/M
3300013297\|Ga0157378_11384181	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300013306\|Ga0163162_13332517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300014325\|Ga0163163_12457370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300015262\|Ga0182007_10113050	All Organisms → cellular organisms → Bacteria → Acidobacteria	905	Open in IMG/M
3300015371\|Ga0132258_13559483	All Organisms → cellular organisms → Bacteria → Acidobacteria	1066	Open in IMG/M
3300015372\|Ga0132256_101002199	All Organisms → cellular organisms → Bacteria → Acidobacteria	951	Open in IMG/M
3300015372\|Ga0132256_101940815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300015373\|Ga0132257_103728217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300018067\|Ga0184611_1099893	All Organisms → cellular organisms → Bacteria → Acidobacteria	1007	Open in IMG/M
3300018466\|Ga0190268_10510876	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	819	Open in IMG/M
3300018469\|Ga0190270_11204520	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	796	Open in IMG/M
3300019458\|Ga0187892_10414173	All Organisms → cellular organisms → Bacteria → Acidobacteria	638	Open in IMG/M
3300021445\|Ga0182009_10013838	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	2884	Open in IMG/M
3300025321\|Ga0207656_10599857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300025327\|Ga0209751_11272599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300025901\|Ga0207688_10681527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300025917\|Ga0207660_11093666	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300025918\|Ga0207662_10791114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300025919\|Ga0207657_10568171	All Organisms → cellular organisms → Bacteria → Acidobacteria	886	Open in IMG/M
3300025925\|Ga0207650_11339524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300025926\|Ga0207659_11634941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300025934\|Ga0207686_10584055	All Organisms → cellular organisms → Bacteria → Acidobacteria	877	Open in IMG/M
3300025934\|Ga0207686_10917469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300025936\|Ga0207670_11751117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300025941\|Ga0207711_11852314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300025944\|Ga0207661_11183630	All Organisms → cellular organisms → Bacteria → Acidobacteria	703	Open in IMG/M
3300025945\|Ga0207679_11877876	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300025981\|Ga0207640_12109811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300026005\|Ga0208285_1002664	All Organisms → cellular organisms → Bacteria → Acidobacteria	1100	Open in IMG/M
3300026023\|Ga0207677_11034303	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	746	Open in IMG/M
3300026023\|Ga0207677_12094347	Not Available	526	Open in IMG/M
3300026075\|Ga0207708_10958717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300026095\|Ga0207676_12270704	Not Available	540	Open in IMG/M
3300026377\|Ga0257171_1104105	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300027880\|Ga0209481_10099459	All Organisms → cellular organisms → Bacteria → Acidobacteria	1404	Open in IMG/M
3300028381\|Ga0268264_10551909	All Organisms → cellular organisms → Bacteria → Acidobacteria	1130	Open in IMG/M
3300028381\|Ga0268264_10812599	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300031716\|Ga0310813_10874212	All Organisms → cellular organisms → Bacteria → Acidobacteria	813	Open in IMG/M
3300031716\|Ga0310813_11449340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300031858\|Ga0310892_10303877	All Organisms → cellular organisms → Bacteria → Acidobacteria	1007	Open in IMG/M
3300031901\|Ga0307406_11012684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300031903\|Ga0307407_10821315	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300032002\|Ga0307416_102575851	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300032122\|Ga0310895_10410308	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300034818\|Ga0373950_0054904	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	789	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	50.41%
Host-Associated	Host-Associated	49.59%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	49.59%
Terrestrial	Environmental → Terrestrial	48.78%
Aquatic	Environmental → Aquatic	1.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.46%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.51%
Sediment	Environmental → Aquatic → Sediment	1.63%
Roots	Host-Associated → Plants → Roots	1.63%
Cave	Environmental → Terrestrial → Cave	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.64%
Loam	Environmental → Terrestrial → Soil → Loam	17.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.07%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.26%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.63%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.63%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.81%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.38%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.44%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.44%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.63%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.06%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.06%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.25%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	3.25%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.44%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.44%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.63%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.63%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.81%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005238	Microbial communities on the surface of aged kaolinite enhanced biochar from soil in Sydney, Australia	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005884	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302	Environmental	Open in IMG/M
3300005887	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026005	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101 (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_114025041	3300000789	Soil	MDKRVGSGPQGPDQEKTPNERGVVDLADARVRLRTRARPSNESLIHELDEIRSLLDQGLSREAKDRLALLISNARNHPTVLALA
F14TB_1057669402	3300001431	Soil	MDKRVGTGSPGHDQKAPDERGVVDLADARVRLRSRARPSIESLMAELDEIRSL
Ga0062592_1024845061	3300004480	Soil	MDKRVGHGPLGRDLENSPTDRGVVDLADARVKIRSRVRPTNESLMRELDEIRSLLDQGLSTEAKARLALLI
Ga0073692_10389512	3300005238	Soil	MDKRVGHGPLGRDQKPPTERGVVDLADARVRIRSRAKPTHESLLRELDEIRSLLDQGLSTEAKDRLALLISNA
Ga0065715_108435942	3300005293	Miscanthus Rhizosphere	MDKRVGHGHLGRDQKSPTDRGVVDFSDARVRIRSRAKPSHESLMRELDEIRSLLDQGLSTEAKDRLALLIS
Ga0065705_100058177	3300005294	Switchgrass Rhizosphere	MDKRVGTGQSGHDQKAPDERGVVDLADARVRLRSRVRPSNESLMAELDEIRSLLDQGLSTEAK
Ga0065705_103823091	3300005294	Switchgrass Rhizosphere	MDKRVGHGPYGRDHQKPPTERGVVDLADARVRIRSRGKPTLESLTKDLDEVRSLLDQGLSIEAKDRLALLINNA
Ga0065705_105352211	3300005294	Switchgrass Rhizosphere	MDKRVGHGPLGRDQKPPTERGVVDLADARVRIRSRKPTHESLMRELDEIRSLLDQGLSTEAKDRLALLINNA
Ga0065707_100415013	3300005295	Switchgrass Rhizosphere	MDKRVGHGPLRRDQQNSPDERGVVDLADARVRIRSRAKPTTESLMHELDEIRSLLDQGLPTEAKDRLALLI
Ga0070690_1009781702	3300005330	Switchgrass Rhizosphere	MDKRVGHGPLGRDQKPPTERGVVDLADARVRIRSRKPTSEGLMRELDEVRSLLDQGLSTEAKDRLALI
Ga0070670_1003106522	3300005331	Switchgrass Rhizosphere	MDKRVGSGPQGPDQEKTPNERGVVDLADARVRLRSRTRHSNESLMQELDEIRSLLDQGLSREA
Ga0070670_1019313641	3300005331	Switchgrass Rhizosphere	MDKRVGHGPLGRDHQKPPTERGVVDLADARVRIRSRGKPSTESLMRELDEIRSLLDQG
Ga0068868_1007972121	3300005338	Miscanthus Rhizosphere	MDKRVGTGPHGHDQKAPDERGVVDLADARVRLRSRARPSTESLMAELDEIRSLLDQGLSTEAKD
Ga0068868_1014347232	3300005338	Miscanthus Rhizosphere	MDKRVGHGHLGRDQKSPTDRGVVDFSDARVRIRSRAKPSHESLMRELDEIRSLLDQGLSTEAKD
Ga0068868_1017418481	3300005338	Miscanthus Rhizosphere	MDKRVGHGPLGRDQKPPTERGVVDLADARVRIRSRAKPTHESLLRELDEIRSLLDQGLSTEAKDRLALLIS
Ga0070660_1007568751	3300005339	Corn Rhizosphere	MDKRVGSGPQGPDQEKTPNERGVVDLADARVRLRSRTRHSNESLMQELDEIRSLLDQGLSREAKDRLALLISNARNHPTVQAL
Ga0070660_1008734591	3300005339	Corn Rhizosphere	MDKRVGHGPLGRDQKPPTERGVVDLADARVRIRSRTKPTHESLMRELDEIRSLLDQGLSTEAKDRLAILINNSRHD
Ga0070689_1014690852	3300005340	Switchgrass Rhizosphere	MDKRVSHVPPGRDAENSPVDRGVVDLADARVKIRSRVRPTNESLTRELDEIRSLLDQGLSIEAKARLALLI
Ga0070689_1016806281	3300005340	Switchgrass Rhizosphere	MDKRVGHGLLGRDQKPPTDRGVVDFSDARVRIRSRAKPSHESLMRELDEIRSLLDQGLSTEAKDRLALLISN
Ga0070692_102447111	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MDKRVGHEPLGRDAENSPIDRGVVDLADARVKIRSRVRPTTESLTQELDEIRSLLD
Ga0070692_105915522	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MDKRVGHGLLRRGQQNSPDERGVVDLADARVRIRSRAKPTTESLMHELDEIRSLLDQGLPTEA*
Ga0070675_1012362182	3300005354	Miscanthus Rhizosphere	MDKRVGHGPLGRDQKPPTERGVVDLADARVRIRSRKPTPEGLMRELDEVRSLLDQGLSTE
Ga0070678_1011285142	3300005456	Miscanthus Rhizosphere	MDKRVGHGHLGRDQKSPTDRGVVDFSDARVRIRSRAKPSHESLMRELDEIRSLLDQGLSTEAK
Ga0070707_1016711942	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MDKRVGHGPPGRDHQKPHERGVVDLADARVRIRSRPKPSNESLLHELDEIRSLLDQGLST
Ga0070699_1019177351	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MDKRVGPGSHDPDPKTSSDRGVVDLADARVRLRSRPRPSNESLMGELDEIRSLLDQ
Ga0070697_1000736411	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MDKRVGTGQYGHDQKAPDERGVVDLADARVRLRSRARPSNETLTAELDEIRSLLDQGLSIEAK
Ga0070697_1019861652	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MDKRVGHGAMARDQQKASTERGVVDLADARVRIRSRAKPTQESLTRELDEVRSLLDQ
Ga0068853_1017440462	3300005539	Corn Rhizosphere	MDKRVGHGPLGRDENSPTDRGVVDLADARVKIRSRVRPTTESLMQELDEIRSLLDQGLSTEAKARLA
Ga0070686_1009623281	3300005544	Switchgrass Rhizosphere	MDKRVGLGPQGPDQKTSTDKGVVDLADARVRLRSRPRPSNESLMSELDEVRSLLDQGL
Ga0070695_1019057162	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MDKRVGHGPLGRDQKPPTERGVVDLADARVRIRSRKPTSEGLMRELDEVRSLLDQGLSTEAKDRLALLIN
Ga0070693_1011691381	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MDKRVGHGPLRRDQEKPPTERGVVDLADARVRIRSRGKPSNESLLRELNEIRSLLDQGLPTEAKD
Ga0070704_1016719932	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MDKRVGPGSKGPDRNTSADRGVVDLADARVRLNSRSRPSTQSLMGELDGVRSLLDQGLSTEA
Ga0068855_1014981701	3300005563	Corn Rhizosphere	MDKRVCHGPVGRDSENSPIDRGVVDLADARVKIRSRVRPTTESLMRELDEIRSLLDQGLSTEAKAR
Ga0070664_1007331952	3300005564	Corn Rhizosphere	MDKRVGHGPSGRDPENSPIDRGVVDLADARVKIRSRVRPTTESLTRELDDIRSLLDQGLS
Ga0070664_1019754082	3300005564	Corn Rhizosphere	MDKRVGHGPSGRDQQQPPTERGVVDLADARVRIRSRAKPTPESLMHELDEIRSLLDQG
Ga0068857_1021987701	3300005577	Corn Rhizosphere	MDKRVGHGHLGRDQKSPTDRGVVDFTDARVRIRSRSKPSHESLMRELDEIRSLLDQGLS
Ga0070702_1001846071	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MDKRVGHEPLGRDAENSPIDRGVVDLADARVKIRSRVRPTTESLTHELDEVRSLLDQGLS
Ga0070702_1008433431	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MDKRVGHGPLGRDQKPPTERGVVDLADARVRIRSRKPTHESLTNELDEIRSLLDQGLSTE
Ga0068861_1003030872	3300005719	Switchgrass Rhizosphere	MDKRVGHGPLGRDQKPPTERGVVDLADARVRIRSRKPTSEGLMRELDEVRSLLDQGLSTE
Ga0068863_1008873621	3300005841	Switchgrass Rhizosphere	MDKRVGHGPLGRDQKPPTERGVVDLADARVRIRSRAKPTHESLLRELDEIRSLLDEGLSAEAKDRLALLISN
Ga0068858_1001326473	3300005842	Switchgrass Rhizosphere	MDKRVGPGSKGPDRNTSADRGVVDLADARVRLSSRSRPSTQSLMGELDEVRSLLDQGLSTEAKERLTL
Ga0068858_1022993162	3300005842	Switchgrass Rhizosphere	MDKRVGHGPVGRDSENSPIDRGVVDLADARVKIRSRVRPTTESLMRELDEIRSLLDQGLS
Ga0068860_1006194882	3300005843	Switchgrass Rhizosphere	MDKRVGHGPLGRDHQKPPTERGVVDLADARVRIRSRGKPSTESLMRELDEIRSLLDQGLSTE
Ga0075291_10127692	3300005884	Rice Paddy Soil	MDKRVGHGPLGRDQKPTTERGVVDLADARVRIRSRAKPTHESLLRELDEIRSLLDQGLSTEAKDRLALLISN
Ga0075292_10379131	3300005887	Rice Paddy Soil	MDKRVGHGPLGRDQKPTTERGVVDLADARVRIRSRAKPTHESLLRELDEIRSL
Ga0068871_1004726431	3300006358	Miscanthus Rhizosphere	MDKRVGHGHLGRDQKSPTDRGVVDFSDARVRIRSRAKPSHESLMRELDEIRSLLDQGLST
Ga0079222_108031471	3300006755	Agricultural Soil	MDKRVGHGPIGRDQQKPPTERGVVDLADARVRIRSRAKPTAESLMHELDEIRSLLDQGLS
Ga0075421_1026966261	3300006845	Populus Rhizosphere	MDKRVGHGPPRRDLQKPPTERGVVDLADARVRIRSRAKPTGESLTRELDEVRSLLDQGLSTEA
Ga0075433_101049861	3300006852	Populus Rhizosphere	MDKRVGHGPLRRDHEKPPTERGVVDLADARVRIRSRGKPSNESLLRELDEIRSLLDQ
Ga0075420_1017701431	3300006853	Populus Rhizosphere	MDKRVGHGPPGRDQQKPLNERGVVDLADARVRIRSRPKPSNESLLRELDEIRSLLDQGLSTEAKQRLATLISNARNFPAVL
Ga0075420_1018881361	3300006853	Populus Rhizosphere	MDKRVVHGAMTLDQQKAPTERGVVDLADARVRIRSRAKPTQESLTRELDEIRSLLDQG
Ga0075434_1013112171	3300006871	Populus Rhizosphere	MDKRVGHGLPSRDHQKSPLERGVVDLADARVRIRSRAKPTVESLTRELDEVHSLLDQG
Ga0079219_120370741	3300006954	Agricultural Soil	MDKRVGHRLLSRGQQNSPDERGVVDLADARVRIRSRAKPTTESLMHELDEIRSLLDQGLPTEAKDRLALL
Ga0105247_109321692	3300009101	Switchgrass Rhizosphere	MDKRVGHGLLRRGQQNSPDERGVVDLADARVRIRSRAKPTTESLMHELDEIRSLLDQGLPTEAKDRLALLISNARNNST
Ga0105243_121320571	3300009148	Miscanthus Rhizosphere	MDKRVGHGLLRRGQQNSPDERGVVDLADARVRIRSRAKPTTESLMHELDEIRSLLDQGLPTEAKDRLAL
Ga0075423_126870111	3300009162	Populus Rhizosphere	MDKRVGHGPPGRDAENSPTDRGVVDLADARVKIRSRVRPTTESLMSDLDEIRSLLDQGLS
Ga0105241_122700531	3300009174	Corn Rhizosphere	MDKRVGHGHLGRDQKSPTDRGVVDFSDARVRIRSRAKPSHESLMRELDEIRSLLDQGLSTEAKDR
Ga0105238_105245302	3300009551	Corn Rhizosphere	MDKRVVHGPLGRDQKPPTERGVVDLADARVRIRSRAKPTHESLLRELDEIRSLLDQGLSAEAKDRLALLISNAR
Ga0105347_12057141	3300009609	Soil	MDKRVGSGSQDPDQPRSKERGVVDLADARVRLRSRARPSNEALIGELDEIRSLLDQGLSTEAKDRLTSLISLGKT*
Ga0126305_105941281	3300010036	Serpentine Soil	MDKRVGPGSLDPDQTHSKERGVVDLADARVRLRSRSRPTNEALMAELHEVRSLLDQGLSTEAK
Ga0126304_102305142	3300010037	Serpentine Soil	MDKRVGHEPPGRDQQKPPIERGVVDLADARVRIRSRVKPTTESLTRELDEVRSLLD
Ga0126314_102640162	3300010042	Serpentine Soil	MDKRVGPGPPGRDPRKPLRERGVVDLADARVRIRSRGKPTNESLLHELVEIRSLLDQGLSTEAKQRLATL
Ga0126314_113255101	3300010042	Serpentine Soil	MDKRVGHELLGRDQQQPPIERGVVDLADARVRIRSRAKPTTESLTRELDEVRSLLDQGL
Ga0126377_108330821	3300010362	Tropical Forest Soil	MDKRVGHGPLGRDSENSPNDRGVVDLADARVKIRSRVRPTTESLTRELDDIRSLLDQGLSTEAK
Ga0105239_106993692	3300010375	Corn Rhizosphere	MDKRVGHGPLGRDQKPPTERGVVDLADARVRIRSRSKPTHESLLRELDEVRSLLDQGLSAEAKDRLALLISNARHDQSILAL
Ga0134124_122755811	3300010397	Terrestrial Soil	MDKRVGHGHLGRDQKSPTDRGVVDFSDARVRIRSRAKPSHESLMRELDEIRSLLDQGLSTEAKDRL
Ga0134124_124836621	3300010397	Terrestrial Soil	MDKRVGHGLPGRDQQKPPTERGVVDLADARVRIRSRAKPTPESLMHELDEIRSLLDQGLSTEAKD
Ga0134122_120609392	3300010400	Terrestrial Soil	MDKRVGHGPLGRDAENSPTDRGVVDLADARVKIRSRVRPTTESLMHELDEIRSLLDQGL
Ga0137362_104866081	3300012205	Vadose Zone Soil	MAKRVGHGSGDPTAENSSSERSVVNLADARVRLRSRSRPSNDSLVQELDEIGTLLDQGLSSEAKLRLTSIISTGRSYPNILALAR
Ga0137376_106540811	3300012208	Vadose Zone Soil	MAKRVGSGSADPTAETSSGERGVVDLADARVRLRSRSRPSNDSLMAELDEIHLLLDQGLSTEA
Ga0164298_113870211	3300012955	Soil	MDKRVGHGSLGRDLEKTPTERGVVDLADARVRIRSRKPTPEALMRELDEVRSLLDQ
Ga0164303_102188042	3300012957	Soil	MDKRVGLGPQSPDQKTSTDKGVVDLADARVRLRSRPRPSNESLMGELDEVRSLLDQGLSTEAKERL
Ga0164299_104264471	3300012958	Soil	MDKRVGHGLLRRGQQNSPDERGVVDLADARVRIRSRAKPTTESLMHELDEIRSLLDQGLPTEAKDRRALLIANARNNVTVLALARC
Ga0164301_105473821	3300012960	Soil	MDKRVGLGPQSPDQKTSTDKGVVDLADARVRLRSRPRPSNESLMSELDEVRSLLDQ
Ga0164302_107969191	3300012961	Soil	MDKRVGHGHLGRDQKSPTDRGVVDFSDARVRIRSRAKPTHESLLRELDEIRSLLDQGLSAEAKDRLA
Ga0164304_105599141	3300012986	Soil	MDKRVGHGPFGRDQKPPTERGVVDLADARVRIRSRAKPTHESLLRELDEIRSLLDQGLSTEAKDRLALLISN
Ga0164305_111909041	3300012989	Soil	MDKRVGHGPLGRDQKPPTERGVVDLADARVRIRSRARPTHETLLRELDEIRSLLDQGL
Ga0157371_106689663	3300013102	Corn Rhizosphere	MDKRVSHVPPGHDAENSPVDRGVVDLADARVKIRSRVRPTNESLTRELDEIRSLLDQGLSIEA
Ga0157378_113841811	3300013297	Miscanthus Rhizosphere	MDKRVGHGPAGRDQQQPPTERGVVDLADARFRIRSRAKPTPESLMHELDEIRSLLDQGLPTEAKDRLALLISNARNNSTVL
Ga0163162_133325171	3300013306	Switchgrass Rhizosphere	MDKRVGHGPLRRDQEKPPTERGVVDLADARVRIRSRGKPSNESLLRELDEIRSLLDQGLPTEAKDRLTLLISDARNNPSVLAL
Ga0163163_124573701	3300014325	Switchgrass Rhizosphere	MDKRVGLGPPGRDPQKPLRERGVVDLADARVRIRSRGKPTNESLLHELDEIRSLLDQGLSTEAKQRLATLISN
Ga0182007_101130502	3300015262	Rhizosphere	MDKRVGHGPMSRDQQKPPTERGVVDLADARVRIRSRAKPTPESLMHELDEIRSLLDQGLSTEAK
Ga0132258_135594831	3300015371	Arabidopsis Rhizosphere	MDKRVGHRLSGGDQKPPTERGVVDLADARVRIRSRAKPTHESLLRELDEIRSLLDQGLSAEAKD
Ga0132256_1010021991	3300015372	Arabidopsis Rhizosphere	MDKRVGHGPLSRDQKTPTERGVVDLADARVRIRSRAKPTQESLTRELDEVRSLLDQGL
Ga0132256_1019408152	3300015372	Arabidopsis Rhizosphere	MDKRVGLGPPGRDHQKPLRERGVVDLADARVRIRSRGKPTNESLLHELDEIRSLLDQGLSTEAKQRLATLISN
Ga0132257_1037282172	3300015373	Arabidopsis Rhizosphere	MDKRVSHVPGRRDAENSPADRGVVDLADARVRIRSRVKPTTESLTQELDEIRSLLDQGLS
Ga0184611_10998933	3300018067	Groundwater Sediment	MDKRVGSGSQDPDQPRSKERGVVDLADARVRLRSRARPSNEALIGELDEIRSLLDQGLSTEAKDRL
Ga0190268_105108762	3300018466	Soil	MDKRVGHVPPGRDHQKPLERGVVDLADARVRIRSRKPTLESLTRELDEVRSLLDQGLSIEAKDRLALLISNARNNPSILALA
Ga0190270_112045201	3300018469	Soil	MDKRVGHGAMQRDQQNAPTERGVVDLADARVRIRSRAKPTQESLTRELDEVRSLLDQ
Ga0187892_104141731	3300019458	Bio-Ooze	MTKHGGPGSGDPTGKDSPKERGVVDLADARVRLHSRSRVSNEVLMKELDEIRSLLDEGLSNEARNRL
Ga0182009_100138386	3300021445	Soil	MDKRVGHGLPGRDHQKPPLERGVVDLADARVRIRSRAKPTTESLTRELDEVRSLLDQGLCSEAKD
Ga0207656_105998571	3300025321	Corn Rhizosphere	MDKRVGHGPYGRDYQKPPTERGVVDLADARVRIRSRAKPTHESLMRELDEIRSLLDQ
Ga0209751_112725991	3300025327	Soil	MARRVGPGSPDPAAKTSSERGVVDLADARVRLHSRSRPSNDSLKQELDEVRSLLDQGL
Ga0207688_106815271	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MDKRVGHGPFGRDQKPPTERGVVDLADARVRIRSRAKPTHESLMRELDEIRSLLDQGL
Ga0207660_110936662	3300025917	Corn Rhizosphere	MDKRVGHGPLGRDQKPPTERGVVDLADARVRIRSRKPTSEGLMRELDEVRSLLD
Ga0207662_107911141	3300025918	Switchgrass Rhizosphere	MDKRVGHGPLGRDQKPPTERGVVDLADARVRIRSRKPTHESLMSELDEIRSLLDQGLSTEAKARHALL
Ga0207657_105681711	3300025919	Corn Rhizosphere	MDKRVGHGPLGRDQKPPTERGVVDLADARVRIRSRKPTNESLTSELDEIRSLLDQGLSTEAKA
Ga0207650_113395241	3300025925	Switchgrass Rhizosphere	MDKRVGHGPLGRDQKPPTERGVVDLADARVRIRSRAKPTHESLTRELDEIRSLLDQGLSTEAKDRLALLI
Ga0207659_116349411	3300025926	Miscanthus Rhizosphere	MDKRVGHGPLGRDQKPPTERGVVDLADARVRIRSRAKPTHESLLRELDEIRSLLDQGLSTEAKDRLALLISN
Ga0207686_105840552	3300025934	Miscanthus Rhizosphere	MDKRVGHGPLGRDQKPPTERGVVDLADARVRIRSRAKPTHESLMRELDEIRSLLDQ
Ga0207686_109174692	3300025934	Miscanthus Rhizosphere	MDKRVGHGPLGRDQKPPTERGVVDLADARVRIRSRSKPTHESLLRELDEVRSLLDQGLSAEAKDRLALLISNA
Ga0207670_117511171	3300025936	Switchgrass Rhizosphere	MDKRVGHGLLGRDQKPPTDRGVVDFSDARVRIRSRAKPSHESLMRELDEIRSLLDQGLSTEAKDRLALLI
Ga0207711_118523141	3300025941	Switchgrass Rhizosphere	MDKRVGPSPQDHDQKPSTDRGVVDLADARVRLRSRPRPSNESLMGELDEIRSLLDQGLST
Ga0207661_111836301	3300025944	Corn Rhizosphere	MDKRVGSGPQGPDQEKTPNERGVVDLADARVRLRSRTRHSNESLMQELDEIRSLLDQGLSRE
Ga0207679_118778761	3300025945	Corn Rhizosphere	MDKRVGHGLLRRGQQNPPDERGVVDLADARVRIRSRAKPTTESLMAELDEIRSLLDQGLPTEAKDRLALLISNARN
Ga0207640_121098111	3300025981	Corn Rhizosphere	MDKRVGHGPLGRDQKPPTERGVVDLADARVRIRSRTKPTHESLMRELDEIRSLLDQGLSTEAK
Ga0208285_10026642	3300026005	Rice Paddy Soil	MDKRVGHGPLGRDQKPTTERGVVDLADARVRIRSRAKPTHESLLRELDEIRSLLDQGLSTEAKD
Ga0207677_110343032	3300026023	Miscanthus Rhizosphere	MDKRVGHGHLGRDQKSPTDRGVVDFSDARVRIRSRAKPSHESLMRELDEIRSLLDQGLSTEAKDRLAL
Ga0207677_120943471	3300026023	Miscanthus Rhizosphere	MDKRVGHGLLRRGQQNSPDERGVVDLADARVRIRSRKPTTEALVLELDAVRSLLDQGLST
Ga0207708_109587172	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MDKRVGHGPYGRDYQKPPTERGVVDLADARVRIRSRGKPSLESLTKDLDEVRSLLDQGLSTEAKDRLSLL
Ga0207676_122707041	3300026095	Switchgrass Rhizosphere	MDKRVGHGAMARDQQKAPTERGVVDLADARVRIRSRAKPTQESLTRELDEVRSLLD
Ga0257171_11041051	3300026377	Soil	MDKRVGHGSKGSDPEKTSKERGVVDLADARVRLRSRARPSNESLTRELDEIRSLLDQGL
Ga0209481_100994591	3300027880	Populus Rhizosphere	MDKRVGLGPPGRDHQKPLRERGVVDLADARVRIRSRGKPTNESLLHELDEIRSLLDQGLSTEAKQ
Ga0268264_105519092	3300028381	Switchgrass Rhizosphere	MDKRVGHGPPGRDHQKPHERGVVDLADARVRIRSRPKPSNESLLHELDEIRSLLDQGLSTEAKQRLA
Ga0268264_108125991	3300028381	Switchgrass Rhizosphere	MDKRVGSDPKGSDQKTSTDRGVVDLADARVRLRSRTRPSNESLTGELDEIRSLLDQGLSTEAK
Ga0310813_108742122	3300031716	Soil	MDKRVGHGPSGRDHEKPPTERGVVDLADARVRIRSRAKPTPESLMHELDEIRSLLDQGLSTEA
Ga0310813_114493401	3300031716	Soil	MDKRVGHGAMARDQQKAPTERGVVDLADARVRIRSRAKPTQESLTRELDEVRSLLDQGLSTEAKDRHA
Ga0310892_103038771	3300031858	Soil	MDKRVGHGPLGRDQKPPTERGVVDLADARVRIRSRKPTAEGLMRELDEVRSLLDQGLSTEAK
Ga0307406_110126841	3300031901	Rhizosphere	MDKRVGHGPVGRDQKPPTERGVVDLADARVRIRSRAKPTHESLMRELDEIRSLLDQGLSTEAKDRLAL
Ga0307407_108213152	3300031903	Rhizosphere	MDKRVGHGPLRRDQQNSPDERGVVDLADARVRIRSRAKPTTESLMHELDEIRSLLDQGLPTEAK
Ga0307416_1025758511	3300032002	Rhizosphere	MDKRVSHVPPGRDQQNSPGDRGVVDFDDARVKIRSRVRPTTESLTRELDEIRSLLD
Ga0310895_104103081	3300032122	Soil	MDKRVGHGPLGRDQKPPTERGVVDLADARVRIRSRKPTSEGLMRELDEVRSLLDQGL
Ga0373950_0054904_604_789	3300034818	Rhizosphere Soil	MDKRVGHGAMARDQQKAPTERGVVDLADARVRIRSRAKPTQESLTRELDEVRSLLDQGLSTE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F070182

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences