Metagenome Family F070181

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070181
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	51 residues
Representative Sequence	KLMEQFRYGVAWKDYPFKREYPERGMTSAEYEKAEDKWLQLTRAITKR
Number of Associated Samples	105
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.32 %
% of genes near scaffold ends (potentially truncated)	87.80 %
% of genes from short scaffolds (< 2000 bps)	92.68 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.187 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (20.325 % of family members)
Environment Ontology (ENVO)	Unclassified (26.829 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.033 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.53% β-sheet: 0.00% Coil/Unstructured: 64.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF00378	ECH_1	27.64
PF13847	Methyltransf_31	4.07
PF02776	TPP_enzyme_N	4.07
PF04909	Amidohydro_2	2.44
PF12847	Methyltransf_18	1.63
PF13472	Lipase_GDSL_2	1.63
PF09084	NMT1	1.63
PF13343	SBP_bac_6	0.81
PF07883	Cupin_2	0.81
PF12172	DUF35_N	0.81
PF08123	DOT1	0.81
PF13649	Methyltransf_25	0.81
PF03070	TENA_THI-4	0.81
PF13607	Succ_CoA_lig	0.81
PF13416	SBP_bac_8	0.81
PF06052	3-HAO	0.81
PF02910	Succ_DH_flav_C	0.81
PF13379	NMT1_2	0.81
PF07331	TctB	0.81
PF01541	GIY-YIG	0.81
PF00072	Response_reg	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.63
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.19 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.19 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.19 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	66.67 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	13.82 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	62.60 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	13.82 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	62.60 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	13.82 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	62.60 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	13.82 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	62.60 %
unclassified Nitrospiraceae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae	13.82 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	62.60 %
Nitrospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	13.82 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %
Unclassified	root	N/A	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0253904	Not Available	516	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10021437	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	1545	Open in IMG/M
3300002075\|JGI24738J21930_10079745	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	684	Open in IMG/M
3300003987\|Ga0055471_10196324	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	629	Open in IMG/M
3300003993\|Ga0055468_10032535	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1231	Open in IMG/M
3300004114\|Ga0062593_101068796	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	834	Open in IMG/M
3300004782\|Ga0062382_10333940	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	700	Open in IMG/M
3300005289\|Ga0065704_10269999	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	945	Open in IMG/M
3300005294\|Ga0065705_10887455	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	580	Open in IMG/M
3300005330\|Ga0070690_100291303	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1167	Open in IMG/M
3300005439\|Ga0070711_101060446	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	697	Open in IMG/M
3300005445\|Ga0070708_100586640	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300005447\|Ga0066689_10936154	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	535	Open in IMG/M
3300005450\|Ga0066682_10801470	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	569	Open in IMG/M
3300005457\|Ga0070662_101292709	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	628	Open in IMG/M
3300005458\|Ga0070681_10903662	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	801	Open in IMG/M
3300005526\|Ga0073909_10013966	All Organisms → cellular organisms → Bacteria	2499	Open in IMG/M
3300005713\|Ga0066905_101715158	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	577	Open in IMG/M
3300005718\|Ga0068866_11000432	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	594	Open in IMG/M
3300005830\|Ga0074473_11233136	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	805	Open in IMG/M
3300006358\|Ga0068871_100819087	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	859	Open in IMG/M
3300006755\|Ga0079222_11319617	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	659	Open in IMG/M
3300006845\|Ga0075421_100407082	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1632	Open in IMG/M
3300006847\|Ga0075431_100026687	All Organisms → cellular organisms → Bacteria	5924	Open in IMG/M
3300006847\|Ga0075431_101397203	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	660	Open in IMG/M
3300006847\|Ga0075431_101550740	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	620	Open in IMG/M
3300006852\|Ga0075433_10451626	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1133	Open in IMG/M
3300006852\|Ga0075433_10505615	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300006854\|Ga0075425_100435832	All Organisms → cellular organisms → Bacteria	1509	Open in IMG/M
3300006854\|Ga0075425_102311595	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	597	Open in IMG/M
3300006880\|Ga0075429_100221683	All Organisms → cellular organisms → Bacteria	1656	Open in IMG/M
3300006880\|Ga0075429_100969593	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	743	Open in IMG/M
3300006880\|Ga0075429_101970071	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	506	Open in IMG/M
3300006914\|Ga0075436_100658758	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	774	Open in IMG/M
3300006969\|Ga0075419_10375233	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300006969\|Ga0075419_10906235	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	636	Open in IMG/M
3300006969\|Ga0075419_11456081	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	513	Open in IMG/M
3300007076\|Ga0075435_100545521	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1004	Open in IMG/M
3300009012\|Ga0066710_102998565	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	657	Open in IMG/M
3300009094\|Ga0111539_11776783	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	715	Open in IMG/M
3300009147\|Ga0114129_10202964	All Organisms → cellular organisms → Bacteria	2684	Open in IMG/M
3300009147\|Ga0114129_10856663	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1155	Open in IMG/M
3300009147\|Ga0114129_12203955	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	663	Open in IMG/M
3300009156\|Ga0111538_13870224	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	518	Open in IMG/M
3300009157\|Ga0105092_10288504	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	925	Open in IMG/M
3300009162\|Ga0075423_10687403	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300009553\|Ga0105249_12774118	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	562	Open in IMG/M
3300009811\|Ga0105084_1085868	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	584	Open in IMG/M
3300009821\|Ga0105064_1084678	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	637	Open in IMG/M
3300010046\|Ga0126384_11267986	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	682	Open in IMG/M
3300010047\|Ga0126382_10126392	All Organisms → cellular organisms → Bacteria → Proteobacteria	1707	Open in IMG/M
3300010366\|Ga0126379_12266351	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	644	Open in IMG/M
3300010399\|Ga0134127_13157103	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	538	Open in IMG/M
3300011427\|Ga0137448_1180669	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	585	Open in IMG/M
3300011436\|Ga0137458_1020953	All Organisms → cellular organisms → Bacteria	1607	Open in IMG/M
3300011445\|Ga0137427_10064817	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	1451	Open in IMG/M
3300012038\|Ga0137431_1017148	All Organisms → cellular organisms → Bacteria → Proteobacteria	1977	Open in IMG/M
3300012039\|Ga0137421_1053403	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	1102	Open in IMG/M
3300012212\|Ga0150985_121916527	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300012361\|Ga0137360_10379615	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300012929\|Ga0137404_10368802	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	1260	Open in IMG/M
3300012948\|Ga0126375_10093937	All Organisms → cellular organisms → Bacteria → Proteobacteria	1756	Open in IMG/M
3300012948\|Ga0126375_10151990	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	1461	Open in IMG/M
3300012961\|Ga0164302_11734035	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	525	Open in IMG/M
3300013297\|Ga0157378_11246880	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	784	Open in IMG/M
3300013306\|Ga0163162_11659842	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	729	Open in IMG/M
3300013306\|Ga0163162_13313767	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	515	Open in IMG/M
3300014267\|Ga0075313_1122292	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	654	Open in IMG/M
3300014270\|Ga0075325_1145794	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	596	Open in IMG/M
3300014326\|Ga0157380_11540876	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	719	Open in IMG/M
3300014745\|Ga0157377_10789881	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	699	Open in IMG/M
3300014864\|Ga0180068_1079297	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	549	Open in IMG/M
3300014865\|Ga0180078_1030037	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	856	Open in IMG/M
3300014865\|Ga0180078_1071454	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	598	Open in IMG/M
3300014968\|Ga0157379_11478683	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	660	Open in IMG/M
3300014969\|Ga0157376_10903125	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	901	Open in IMG/M
3300015372\|Ga0132256_103662049	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300015373\|Ga0132257_101184509	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	967	Open in IMG/M
3300015374\|Ga0132255_100161095	All Organisms → cellular organisms → Bacteria	3140	Open in IMG/M
3300016294\|Ga0182041_10598864	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	968	Open in IMG/M
3300016404\|Ga0182037_10820917	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	803	Open in IMG/M
3300018073\|Ga0184624_10118545	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	1145	Open in IMG/M
3300018073\|Ga0184624_10218561	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	852	Open in IMG/M
3300018073\|Ga0184624_10372032	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	638	Open in IMG/M
3300018422\|Ga0190265_12518394	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	613	Open in IMG/M
3300018422\|Ga0190265_12560974	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	608	Open in IMG/M
3300018429\|Ga0190272_10483329	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1045	Open in IMG/M
3300018476\|Ga0190274_13792602	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	511	Open in IMG/M
3300019886\|Ga0193727_1026578	All Organisms → cellular organisms → Bacteria	2016	Open in IMG/M
3300020060\|Ga0193717_1053010	All Organisms → cellular organisms → Bacteria	1427	Open in IMG/M
3300021081\|Ga0210379_10030944	All Organisms → cellular organisms → Bacteria → Proteobacteria	2071	Open in IMG/M
3300022756\|Ga0222622_11357471	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	523	Open in IMG/M
3300023064\|Ga0247801_1076405	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	541	Open in IMG/M
3300025558\|Ga0210139_1122489	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	531	Open in IMG/M
3300025567\|Ga0210076_1032432	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1120	Open in IMG/M
3300025903\|Ga0207680_10561454	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	815	Open in IMG/M
3300025915\|Ga0207693_11456609	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	506	Open in IMG/M
3300025916\|Ga0207663_10875182	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	718	Open in IMG/M
3300025916\|Ga0207663_11709924	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300025931\|Ga0207644_10132757	All Organisms → cellular organisms → Bacteria → Proteobacteria	1908	Open in IMG/M
3300025939\|Ga0207665_11437816	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	549	Open in IMG/M
3300025972\|Ga0207668_11523095	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	604	Open in IMG/M
3300026557\|Ga0179587_10498367	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	799	Open in IMG/M
3300027006\|Ga0209896_1011507	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	958	Open in IMG/M
3300027163\|Ga0209878_1017992	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	957	Open in IMG/M
3300027462\|Ga0210000_1018716	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1053	Open in IMG/M
3300027548\|Ga0209523_1026927	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300027617\|Ga0210002_1010422	All Organisms → cellular organisms → Bacteria	1427	Open in IMG/M
3300027665\|Ga0209983_1025806	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1241	Open in IMG/M
3300027722\|Ga0209819_10107384	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	975	Open in IMG/M
3300027787\|Ga0209074_10237747	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	702	Open in IMG/M
3300027880\|Ga0209481_10039771	All Organisms → cellular organisms → Bacteria	2155	Open in IMG/M
3300027909\|Ga0209382_10242137	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2052	Open in IMG/M
3300027909\|Ga0209382_11935569	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	568	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1107463	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	606	Open in IMG/M
3300031820\|Ga0307473_10099276	All Organisms → cellular organisms → Bacteria	1545	Open in IMG/M
3300031890\|Ga0306925_11368314	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	700	Open in IMG/M
3300031954\|Ga0306926_10125041	All Organisms → cellular organisms → Bacteria	3174	Open in IMG/M
3300032126\|Ga0307415_100179859	All Organisms → cellular organisms → Bacteria	1658	Open in IMG/M
3300032205\|Ga0307472_101418723	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300033004\|Ga0335084_11700546	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	620	Open in IMG/M
3300033433\|Ga0326726_10699705	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	978	Open in IMG/M
3300034147\|Ga0364925_0289500	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	612	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.16%
Host-Associated	Host-Associated	39.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	43.09%
Plants	Host-Associated → Plants	39.84%
Aquatic	Environmental → Aquatic	17.07%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	41.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	30.08%
Sediment	Environmental → Aquatic → Sediment	10.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.94%
Freshwater	Environmental → Aquatic → Freshwater	3.25%
Marine	Environmental → Aquatic → Marine	3.25%
Peat	Environmental → Terrestrial → Peat	0.81%
Floodplain	Environmental → Terrestrial → Floodplain	0.81%
Roots	Host-Associated → Plants → Roots	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	26.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	26.02%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.57%
Loam	Environmental → Terrestrial → Soil → Loam	8.13%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.69%
Sand	Environmental → Terrestrial → Soil → Sand	4.06%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.06%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.25%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.44%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.44%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.81%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	26.02%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.69%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	4.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.06%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.25%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.25%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.25%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.44%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.44%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.63%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	20.33%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	6.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.06%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.25%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.25%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.44%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.44%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.44%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.63%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.63%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.81%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.81%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.81%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.81%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.81%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300002075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4	Host-Associated	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004782	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005830	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.178_YBM	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012038	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT800_2	Environmental	Open in IMG/M
3300012039	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014267	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1	Environmental	Open in IMG/M
3300014270	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014864	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231A'_16_10D	Environmental	Open in IMG/M
3300014865	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT499_16_10D	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023064	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6	Environmental	Open in IMG/M
3300025558	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025567	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027163	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027462	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes)	Host-Associated	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027665	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_02539041	2228664021	Soil	WKEYPFKREYPERGMTSAEYEKAEDRWTQLTRGITKR
AF_2010_repII_A001DRAFT_100214371	3300000793	Forest Soil	VAWKEYPFKREYPERGMTTAQYQDAEEKWSQLLRATTQR*
JGI24738J21930_100797452	3300002075	Corn Rhizosphere	YPFKREYPERGMTSAEYEKAEDKWLQLTRAITKR*
Ga0055471_101963241	3300003987	Natural And Restored Wetlands	EGQKLMEQFRYGVAWKEYPFKREYPERGMSSAEYEDAEDKWLQLTRSITKK*
Ga0055468_100325352	3300003993	Natural And Restored Wetlands	MERFCYGVAWKDYPFKREYPERGMTSSEYENAEDKWLQLTRSITKRQN*
Ga0062593_1010687961	3300004114	Soil	VAWKDYSFKREYPERGMTSAEYEKAEDRWAQLTRAITKR*
Ga0062382_103339401	3300004782	Wetland Sediment	EQFRYGVAWKEYSFKREYPERGMTSVEYEKAEDKWMQATRALTKR*
Ga0065704_102699991	3300005289	Switchgrass Rhizosphere	HAALLLTDFVIGADGQKLMEQFRYGVAWKQYPFKREYPERGMTAAQYQDAEEKWSQLLRSITHR*
Ga0065705_108874551	3300005294	Switchgrass Rhizosphere	AEGQKIMEQFRYGIAWKEYPFKREYPERGVTTAQYQDAEEKWSQLLRSITQR*
Ga0070690_1002913032	3300005330	Switchgrass Rhizosphere	FRYGVAWKDYPFKREYPEQGMTSAEYEKAEDRWLQLTRAITKRQN*
Ga0070711_1010604461	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	GQKLMEQFRYGVAWKDYPFKREYPERGMTSAEYEKAEDKWLQLTRAITKR*
Ga0070708_1005866402	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LLLTDFVIGAEGQKLMEQFRYGVAWKEYTFKREYPERGMTTSQYQDAEEKWSDLLRSITRR*
Ga0066689_109361541	3300005447	Soil	MEQYRYGVAWKEYPFKRDYPDRGMTSAEYEKAEDKWTQLVRSITRR*
Ga0066682_108014702	3300005450	Soil	MEQFRYGVAWRQYPFKREYPERGMTSAEYEKAEDKWLQLTRSITKRQN*
Ga0070662_1012927092	3300005457	Corn Rhizosphere	LLFTDFVIGADGQKLMEQFRYGVAWKDYPFKREYPERGMTSAEYEKAEDRWLQLTRAITKRQN*
Ga0070681_109036622	3300005458	Corn Rhizosphere	DGQKLMEQFRYGVAWKDYPFKRDYPERGMTSAEYEKNEDKWLQLTRSITKRQN*
Ga0073909_100139661	3300005526	Surface Soil	KLMEQFRYGVAWKDYPFKRDYPERGMTSAEYEKNEDKWLQLTRAITKRQGGGDRF*
Ga0066905_1017151581	3300005713	Tropical Forest Soil	MEQFRYGVAWKEYPFKREYPERGMTTAQYQDAEEKWSQLLRATTQR*
Ga0068866_110004322	3300005718	Miscanthus Rhizosphere	VIGADGQKLMEQFRYGVAWKDYPFKRDYPERGMTSAEYEKNEDKWLQLTRSITKRQGGDRF*
Ga0074473_112331362	3300005830	Sediment (Intertidal)	EYPFKREYPERGMTSVEYEKAEDRWTQLTRAITKR*
Ga0068871_1008190872	3300006358	Miscanthus Rhizosphere	LMEQFRYGVAWKDYPFKREYPERGMTSAEYEKAEDKWLQLTRAITKR*
Ga0079222_113196172	3300006755	Agricultural Soil	ALLFTDFVIGADGQKLMEQFRYGVAWKDYPFKRDYPERGMTSAEYEKNEDKWLQLTRSITKQQGTNRF*
Ga0075421_1004070821	3300006845	Populus Rhizosphere	MEQFRYGVAWKEYPFKREYIERGMSSAEYEHAEDKWLQLTRSISKK*
Ga0075431_1000266871	3300006847	Populus Rhizosphere	MEQFRYGVAWKEYPFKREYPERGMTSAEYENAEDKWLQLTRSISKK*
Ga0075431_1013972031	3300006847	Populus Rhizosphere	AALLFTDFVIGADGQKLMEQFRYGVAWRDYPFKRDYPERGMTSAEYEKNEDKWLQLTRAITKRQGGDRF*
Ga0075431_1015507401	3300006847	Populus Rhizosphere	EQFRYGVAWKEYPFKREYPERGMTTAQYQDAEEKWSQLLRSITHR*
Ga0075433_104516262	3300006852	Populus Rhizosphere	FTDFVIGAEGQKLMEQFRYGVAWKDYPFKREYPERGMTSAEYEKAEDKWLQLTRAITKRQN*
Ga0075433_105056151	3300006852	Populus Rhizosphere	MEQFRYGVAWKEYPFKREYPERGMTTAQYQDAEEKWSQLLRSITHR*
Ga0075425_1004358321	3300006854	Populus Rhizosphere	YGVAWKEYPFKREYPERGMTTAQYQDAEEKWSQLLRSIIHR*
Ga0075425_1023115951	3300006854	Populus Rhizosphere	LMEQFRYGVAWKEYPFKREYPERGMTTAQYQDAEEKWSQLLRSITHR*
Ga0075429_1002216833	3300006880	Populus Rhizosphere	GAEGQKLMEQFRYGVAWKEYPFKREYPERGMTTAQYQDAEEKWSQLLRSIIHR*
Ga0075429_1009695932	3300006880	Populus Rhizosphere	GVAWKEYPFKREYPERGMTTAQYQDAEEKWSQLLRSITHR*
Ga0075429_1019700712	3300006880	Populus Rhizosphere	DFVIGAEGQKLMEQFRYGVAWKDYPFKREYPERGMTSAEYEKAEDRWLQLTRAITKRQN*
Ga0075436_1006587581	3300006914	Populus Rhizosphere	KDYPFKREYPERGMTSAEYEKAEDRWLQLTRAITKRQN*
Ga0075419_103752332	3300006969	Populus Rhizosphere	LMEQFRYGVAWKEYPFKREYPERGMTTAQYQDAEEKWSQLLRSIIHR*
Ga0075419_109062352	3300006969	Populus Rhizosphere	VIGADGQKLMEQFRYGVAWRDYPFKRDYPERGMTSAEYEKNEDKWLQLTRAITKRQGGDRF*
Ga0075419_114560811	3300006969	Populus Rhizosphere	GAEGQKLMEQFRYGVAWKEYPFKREYPERGMTTAQYQDAEEKWSQLLRSITHR*
Ga0075435_1005455212	3300007076	Populus Rhizosphere	QKLMEQFRYGVAWKDYPFKRDYPERGMSSAEYEKAEDRWLQLTRAITKRPN*
Ga0066710_1029985652	3300009012	Grasslands Soil	MERVAWKEYPFKREYPERGMTTAQYQDAEEKWTQLLRSTTHR
Ga0111539_117767832	3300009094	Populus Rhizosphere	FTDFVIGAEGQKLMEQFRYGVAWKDYPFKREYPEQGMTSAEYERAEDRWLQLTRAITKRQN*
Ga0114129_102029641	3300009147	Populus Rhizosphere	PHATLLLTDFVIGAEGQKLMEQFKYGVAWKEYPFKREYPERGITAAQYQDAEEKWSQLLRSITHR*
Ga0114129_108566631	3300009147	Populus Rhizosphere	DFVIGADGQKLMEQFRYGVAWKDYPFKRDYPERGMSSAEYEKAEDKWLQLTRSITKRQGGDRF*
Ga0114129_122039551	3300009147	Populus Rhizosphere	KLMEQFRYGVAWKEYPFKREYPERGMTTAQYQDAEEKWSQLLRSIIHR*
Ga0111538_138702241	3300009156	Populus Rhizosphere	LLTDFVIGAEGQKLMEQFRYGIAWKEYPFKREYPERGMTTAQYQDAEEKWSQLLRSITQR
Ga0105092_102885042	3300009157	Freshwater Sediment	VAWKEYPFKKEYPERGMSSAEYENAEDKWLQLTRSISKK*
Ga0075423_106874031	3300009162	Populus Rhizosphere	KLMEQFRYGVAWKEYPFKREYPERGMTTAQYQDAEEKWSQLLRSITHR*
Ga0105249_127741182	3300009553	Switchgrass Rhizosphere	FTDFVIGADGQKLMEQFRYGVAWKDYPFKREYPERGMTSAEYEKAEDRWLQLTRAITKRQN*
Ga0105084_10858681	3300009811	Groundwater Sand	NAGGSAVIANAPHSHAALLLTDFVIGADGQKLMEQFKYGVAWKEYPFKREYPERGMTTAQYQDAEEKWSQLLRSITRR*
Ga0105064_10846781	3300009821	Groundwater Sand	MEQFKYGVAWKEYPFKREYPERGMTTAQYQDAEEKWSQLLRSITHR*
Ga0126384_112679861	3300010046	Tropical Forest Soil	FRYGVAWKEYPFKREYPERGMTTAQYQDAEEKWSQSLRAVTQR*
Ga0126382_101263921	3300010047	Tropical Forest Soil	HAALLLTDFVIGAEGQKLMEQFQYGVAWKEYPFKREYPERSMTTAQYQDAEEKWSQLLRSTTQR*
Ga0126379_122663511	3300010366	Tropical Forest Soil	EQYRYGVAWKEYSFKREYPERGMTSSEYEKAEDKWTQLVRSMTRR*
Ga0134127_131571032	3300010399	Terrestrial Soil	FVIGAEGQKLMEQFRYGVAWKDYPFKREYPERGMTSADYETAEDKWLQLTRAITKRQN*
Ga0137448_11806692	3300011427	Soil	MEQFRYGVAWKEYPFKREYPERGMSSAEYEKAEDRWTQLTRAVTKR*
Ga0137458_10209531	3300011436	Soil	TDFVIGAEGQKLMEQFRYGVAWKEYAFKREYPERGMTSAEYEKAEDRWTQATRALTKR*
Ga0137427_100648171	3300011445	Soil	LMEQFKYGVAWKEHAFKREYPERGMTSAQYQDAEDKWSQLLRSSTQR*
Ga0137431_10171483	3300012038	Soil	EGQKLMEQFKYGVAWKEHAFKREYPERGMTSAQYQDAEDKWSQLLRSSTQR*
Ga0137421_10534031	3300012039	Soil	QFKYGVAWKEHAFKREYPERGMTSAQYQDAEDKWSQLLRSSTQR*
Ga0150985_1219165271	3300012212	Avena Fatua Rhizosphere	LLTEFILGAEGQKLMEQYRYGVAWKEYPFKREYPERGMTTSEYEKAEDRWTQLVRSITHR
Ga0137360_103796153	3300012361	Vadose Zone Soil	YPFKRDYPERGMTSAEYEKAEDKWTQLVRSITRR*
Ga0137404_103688022	3300012929	Vadose Zone Soil	FVTGAEGQKLMEQFRYGVAWKEYPFKREYPERGMTTAQYQDAEEKWSQLLRSTTHR*
Ga0126375_100939371	3300012948	Tropical Forest Soil	GVAWKEYPFKREYPERSMTTAQYQDAEEKWSQLLRSTTQR*
Ga0126375_101519901	3300012948	Tropical Forest Soil	TDFVIGAEGQKLMEQFRYGVAWKEYPFKREYPERGMTTAQYQDAEEKWSQLLRATTQR*
Ga0164302_117340351	3300012961	Soil	QKLMEQFRYGIAWKEYPFKREYPERGMTTAQYQDAEEKWSQLLRSITQR*
Ga0157378_112468802	3300013297	Miscanthus Rhizosphere	DGQKLMEQFRYGVAWKDYPFKRDYPERGMTSTEYEKNEDKWLQLTRAITKRQGGDRF*
Ga0163162_116598421	3300013306	Switchgrass Rhizosphere	EQFRYGVAWKDYPFKRDYPERGMTSAEYEKNEDKWLQLTRSITKRQGGDRF*
Ga0163162_133137671	3300013306	Switchgrass Rhizosphere	EQFRYGVAWKDYPFKRDYPERGMTSAEYEKNEDKWLQLTRAITKRQGGDRF*
Ga0075313_11222921	3300014267	Natural And Restored Wetlands	LMEKFKYGVAWKEYPFKREYPERGMTSTQYQDAEDKWIQLLRSIAQRQ*
Ga0075325_11457942	3300014270	Natural And Restored Wetlands	FKYGVAWKEYPFKREYPERGMTSTQYQDAEDKWIQLLRSITQRQ*
Ga0157380_115408761	3300014326	Switchgrass Rhizosphere	AEGQKLMEQFRYGVAWKDYAFKREYPERGMTSAQYEAAEDKWMNLTRTVTKR*
Ga0157377_107898811	3300014745	Miscanthus Rhizosphere	GQKLMEQFRYGVAWKDYPFKREYPERGMTSAEYEKAEDRWLQLTRAITKRQN*
Ga0180068_10792972	3300014864	Soil	MEQFRYGVAWKEYAFKREYPERGMTSVEYEKAVDRWTQLTRAVTKR*
Ga0180078_10300371	3300014865	Soil	KLMEQFKYGVAWKEHAFKREYPERGMTSAQYQDAEDKWSQLLRSSTQR*
Ga0180078_10714541	3300014865	Soil	FVIGAEGQKLMEQFRYGVAWKEYPFKREYPERGMTTAQYQDAEEKWSQLLRSITQR*
Ga0157379_114786831	3300014968	Switchgrass Rhizosphere	MEQFRYGVAWKNYPFKREYPEQGMTSAQYEAAEDKWTQLSRALTKR*
Ga0157376_109031252	3300014969	Miscanthus Rhizosphere	FTDFVIGADGQKLMEQFRYGVAWKDYPFKREYPEQGMTSAEYEKAEDRWLQLTRAITKRQN*
Ga0132256_1036620491	3300015372	Arabidopsis Rhizosphere	LMEQFRYGVAWKDYPFKREYPEQGMTSAEYERAEDRWLQLTRAITKRQN*
Ga0132257_1011845091	3300015373	Arabidopsis Rhizosphere	KLMEQFRYGVAWKDYPFKREYPERGMTSAEYEKAEDRWLQLTRAITKRQN*
Ga0132255_1001610951	3300015374	Arabidopsis Rhizosphere	RYGVAWKEYPFKREYPERGMTTAQYQDAEEKWSQLLRSITQR*
Ga0182041_105988641	3300016294	Soil	EGQKLMEQFRYGVAWKDYPFKREYPERGMTSAEYEKAEDRWLQLTRAITKRQN
Ga0182037_108209172	3300016404	Soil	DFVIGAEGQKLMEQFRYGVAWKDYPFKREYPERGMTSAEYEKAEDRWLQLTRAITKRQN
Ga0184624_101185451	3300018073	Groundwater Sediment	FRYGVAWKEYPFKREYPERGMTTAQYQDAEEKWSQLLRSITQR
Ga0184624_102185612	3300018073	Groundwater Sediment	MEQFRYGVAWKDYPFKRDYPERGMTSAEYEKNEDKWLQLTRAITKRQGGGDRF
Ga0184624_103720321	3300018073	Groundwater Sediment	LMEQFRYGVAWKDYPFKRDYPERGMTSAEYEKNEDKWLQLTRTITKRQGGDRF
Ga0190265_125183942	3300018422	Soil	FTDFVIGAEGQKLMEQFRYGVAWKDYPFKREYPERGMTSTDYENAEDKWLQLTRSITKK
Ga0190265_125609742	3300018422	Soil	LLFTDFVIGAEGQKLMEQFRYGVAWKDYPFKREYPERGMTSTDYENAEDKWLQLTRSITK
Ga0190272_104833291	3300018429	Soil	LLFTDFVIGADGQKIMEQFRYGVSWKEPPFKREYVELGMSVAEYNKAEKQWGNLLRTLTR
Ga0190274_137926022	3300018476	Soil	LLFTDFVIGAEGQKLMEQFRYGVAWKEYAFKREYPERGMTSAEYEKAEDRWTQLTRAMTK
Ga0193727_10265784	3300019886	Soil	LLLTDFVIGAEGQKLMEQFRYGVAWKEYPFKREYPERGMTTAQYQDAEEKWSQLLRSTTH
Ga0193717_10530101	3300020060	Soil	FRYGVAWKDYPFKREYPERGMTSTEYENAEDKWLQLTRSITKRQN
Ga0210379_100309443	3300021081	Groundwater Sediment	GVAWKEYPFKREYPERGMTTAQYQDAEEKWSQLLRSITQR
Ga0222622_113574712	3300022756	Groundwater Sediment	GAEGQKLMEQFRYGVAWKEYPFKREYPERGMTTAQYQDAEEKWSQLLRSTTHR
Ga0247801_10764052	3300023064	Soil	MEQFRYGVAWKDYPFKREYPERGMTSAEYEKAEDKWLQLTRAITKR
Ga0210139_11224891	3300025558	Natural And Restored Wetlands	MDQFRYGVAWKDYPFKREYPERGMTSAQYQDAEDKWSQLLRSTTQR
Ga0210076_10324322	3300025567	Natural And Restored Wetlands	MERFCYGVAWKDYPFKREYPERGMTSSEYENAEDKWLQLTRSITKRQN
Ga0207680_105614541	3300025903	Switchgrass Rhizosphere	DGQKLMEQFRYGVAWKDYPFKREYPERGMTSAEYEKAEDKWLQLTRAITKR
Ga0207693_114566092	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VIGAEGQKLMEQFRYGVAWKEYTFKREYPERGMTTSQYQDAEEKWSDLLRSITRR
Ga0207663_108751821	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	KLMEQFRYGVAWKDYPFKREYPERGMTSAEYEKAEDKWLQLTRAITKR
Ga0207663_117099242	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	DYPFKREYPEQGMTSAEYEKAEDRWLQLTRAITKRQN
Ga0207644_101327571	3300025931	Switchgrass Rhizosphere	GVAWKDYPFKREYPERGMTSAEYEKAEDKWLQLTRAITKR
Ga0207665_114378162	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	ALLFTEFVIGADGQKLMEQFRYGVAWKDYPFKREYPERGMTSAEYEKAEDKWLQLTRSLTKRQN
Ga0207668_115230952	3300025972	Switchgrass Rhizosphere	YPFKRDYPERGMTSAEYEKNEDKWLQLTRSITKRQGGDRF
Ga0179587_104983671	3300026557	Vadose Zone Soil	RYGVAWKDYPFKRDYPERGMTSAEYEKNEDKWLQLTRSITKRQGGDRF
Ga0209896_10115072	3300027006	Groundwater Sand	MEQFKYGVAWKEYPFKREYPERGMTTAQYQDAEEKWSQLLRSITRR
Ga0209878_10179922	3300027163	Groundwater Sand	ALLFTDFVIGADGQKLMEQFKYGVAWKEYPFKREYPERGMTTAQYQDAEEKWSQLLRSITRR
Ga0210000_10187161	3300027462	Arabidopsis Thaliana Rhizosphere	PFKREYPERGMTSSEYENAEDKWLQLTRSITKRQN
Ga0209523_10269274	3300027548	Forest Soil	RYGVAWKEYPFKREYPERGMTSSEYEKAEDKWTQLVRSITRR
Ga0210002_10104221	3300027617	Arabidopsis Thaliana Rhizosphere	FVIGAEGQKLMEQFRYGVAWKDYPFKREYPERGMTSADYENAEDKWLQLTRSITKRQN
Ga0209983_10258061	3300027665	Arabidopsis Thaliana Rhizosphere	DFVIGAEGQKLMEQFRYGVAWKDYPFKREYPERGMTSADYENAEDKWLQLTRSITKRQN
Ga0209819_101073842	3300027722	Freshwater Sediment	HAALLLTDFVIGADGQKLMEQFRYGVAWKQYPFKREYPERGMTTAQYQDAEEKWSQLLRSITRR
Ga0209074_102377472	3300027787	Agricultural Soil	DFVIGADGQKLMEQFRYGVAWKDYPFKREYPERGMTSAEYEKAEDKWLQLTRAITKR
Ga0209481_100397713	3300027880	Populus Rhizosphere	QKLMEQFRYGVAWKEYPFKREYPERGMTTAQYQDAEEKWSQLLRSIIHR
Ga0209382_102421371	3300027909	Populus Rhizosphere	MEQFRYGVAWKEYPFKREYIERGMSSAEYEHAEDKWLQLTRSISKK
Ga0209382_119355692	3300027909	Populus Rhizosphere	TDFVIGADGQKLMEQFRYGVAWRDYPFKRDYPERGMTSAEYEKAEDKWLQLTRSITKRQGGGDRF
(restricted) Ga0255311_11074632	3300031150	Sandy Soil	WKDYSFKREYPERGMTSAEYEKAEDRWAQLTRAITKR
Ga0307473_100992762	3300031820	Hardwood Forest Soil	ALLLADFVIGAEGQKLMEQFRYGVAWKEYPFKREYPERGMTTSQYQDAEEKWSDLLRSITRR
Ga0306925_113683142	3300031890	Soil	TDFVIGAEGQKLMEQFRYGVAWKDYPFKREYPERGMTSAEYEKAEDRWLQLTRAITKRQN
Ga0306926_101250412	3300031954	Soil	MEQFRYGVAWKDYPFKREYPERGMTSAEYEKAEDRWLQLTRAITKRQN
Ga0307415_1001798593	3300032126	Rhizosphere	EGQKLMEQFRYGVAWKDYPFKREYPERGMTSTEYENAEDKWLQLTRSISKK
Ga0307472_1014187231	3300032205	Hardwood Forest Soil	GVAWKKQPFKREYPERGMTSLQYQDAEEKWDQLLQSIVVRR
Ga0335084_117005462	3300033004	Soil	EQFKYGVAWKEYSFKREYPERGMTSLQYQDAEEKWDNLMHSIVVRK
Ga0326726_106997052	3300033433	Peat Soil	GQKLMEHFRYGVAWKEYPFKREYPERGMTTAQYQDAEEKWSELLRSITHR
Ga0364925_0289500_2_109	3300034147	Sediment	EYSFKREYPERGMTSAEYEKAEDRWMQLTRAITKR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters