Metagenome / Metatranscriptome Family F070168

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070168
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	112 residues
Representative Sequence	DDFWTGLDWNLLHFTTVRGFAGTLFADVAAIGTCESHGLSRDRVYFDVGYSLRVLHDAFGLHQQLLSIDFAVPLNRHDPYSSCLNIPRAAADRPPFVVLVSFFPSF
Number of Associated Samples	112
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.56 %
% of genes from short scaffolds (< 2000 bps)	93.50 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (57.724 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.886 % of family members)
Environment Ontology (ENVO)	Unclassified (41.463 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.659 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 2.24% β-sheet: 41.04% Coil/Unstructured: 56.72%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF00733	Asn_synthase	4.07
PF06750	DiS_P_DiS	2.44
PF00535	Glycos_transf_2	0.81
PF07228	SpoIIE	0.81
PF00226	DnaJ	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG1989	Prepilin signal peptidase PulO (type II secretory pathway) or related peptidase	Cell motility [N]	7.32

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
All Organisms	root	All Organisms	42.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
cellular organisms	root	All Organisms → cellular organisms	42.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.33 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	5.69 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	24.39 %
Lentisphaerae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	4.88 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.81 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	24.39 %
unclassified Lentisphaerota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota	4.88 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.81 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	6.50 %
Lentisphaerae bacterium RIFOXYB12_FULL_65_16	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerae bacterium RIFOXYB12_FULL_65_16	4.88 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.81 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.81 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
Lentisphaerae bacterium RIFOXYB12_FULL_65_16	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerae bacterium RIFOXYB12_FULL_65_16	4.88 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	2.44 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	1.63 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.81 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.81 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
Lentisphaerae bacterium RIFOXYB12_FULL_65_16	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerae bacterium RIFOXYB12_FULL_65_16	4.88 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	2.44 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	1.63 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.81 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.81 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
Lentisphaerae bacterium RIFOXYB12_FULL_65_16	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerae bacterium RIFOXYB12_FULL_65_16	4.88 %
unclassified Kofleriaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae	1.63 %
unclassified Polyangiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae	1.63 %
Haliangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium	0.81 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.81 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.81 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
Lentisphaerae bacterium RIFOXYB12_FULL_65_16	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerae bacterium RIFOXYB12_FULL_65_16	4.88 %
Kofleriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	1.63 %
Polyangiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	1.63 %
Haliangium ochraceum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	0.81 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.81 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.81 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2046860005\|LWAeNNiAF_GBUVFP102JQIO1	Not Available	515	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104946168	Not Available	541	Open in IMG/M
3300002568\|C688J35102_119515605	Not Available	710	Open in IMG/M
3300005327\|Ga0070658_10950765	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerae bacterium RIFOXYB12_FULL_65_16	747	Open in IMG/M
3300005330\|Ga0070690_100121156	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	1756	Open in IMG/M
3300005333\|Ga0070677_10044345	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1769	Open in IMG/M
3300005335\|Ga0070666_10414153	All Organisms → cellular organisms → Bacteria → Proteobacteria	970	Open in IMG/M
3300005337\|Ga0070682_101031827	Not Available	684	Open in IMG/M
3300005338\|Ga0068868_101094617	Not Available	733	Open in IMG/M
3300005338\|Ga0068868_102294255	Not Available	515	Open in IMG/M
3300005338\|Ga0068868_102439384	Not Available	500	Open in IMG/M
3300005340\|Ga0070689_100010436	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	6621	Open in IMG/M
3300005345\|Ga0070692_11363629	Not Available	511	Open in IMG/M
3300005355\|Ga0070671_100163915	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1879	Open in IMG/M
3300005364\|Ga0070673_100417745	All Organisms → cellular organisms → Bacteria → Proteobacteria	1202	Open in IMG/M
3300005366\|Ga0070659_100209034	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1608	Open in IMG/M
3300005367\|Ga0070667_100109577	All Organisms → cellular organisms → Bacteria	2393	Open in IMG/M
3300005367\|Ga0070667_100443957	All Organisms → cellular organisms → Bacteria → Proteobacteria	1185	Open in IMG/M
3300005436\|Ga0070713_101479342	Not Available	659	Open in IMG/M
3300005437\|Ga0070710_10297636	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1052	Open in IMG/M
3300005441\|Ga0070700_100278112	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1212	Open in IMG/M
3300005441\|Ga0070700_100916817	Not Available	714	Open in IMG/M
3300005441\|Ga0070700_101869440	Not Available	518	Open in IMG/M
3300005444\|Ga0070694_101664050	Not Available	542	Open in IMG/M
3300005459\|Ga0068867_100814277	Not Available	834	Open in IMG/M
3300005535\|Ga0070684_100472632	Not Available	1160	Open in IMG/M
3300005543\|Ga0070672_101013923	Not Available	736	Open in IMG/M
3300005547\|Ga0070693_100652640	Not Available	765	Open in IMG/M
3300005564\|Ga0070664_100836054	All Organisms → cellular organisms → Bacteria → Proteobacteria	862	Open in IMG/M
3300005614\|Ga0068856_101493203	Not Available	690	Open in IMG/M
3300005614\|Ga0068856_102112369	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerae bacterium RIFOXYB12_FULL_65_16	573	Open in IMG/M
3300005615\|Ga0070702_100177641	All Organisms → cellular organisms → Bacteria → Proteobacteria	1390	Open in IMG/M
3300005616\|Ga0068852_101439938	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerae bacterium RIFOXYB12_FULL_65_16	711	Open in IMG/M
3300005618\|Ga0068864_101504248	Not Available	676	Open in IMG/M
3300005718\|Ga0068866_10164079	All Organisms → cellular organisms → Bacteria → Proteobacteria	1298	Open in IMG/M
3300005719\|Ga0068861_100402824	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1214	Open in IMG/M
3300005842\|Ga0068858_102341564	Not Available	528	Open in IMG/M
3300005993\|Ga0080027_10163768	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerae bacterium RIFOXYB12_FULL_65_16	858	Open in IMG/M
3300006046\|Ga0066652_100030765	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3841	Open in IMG/M
3300006358\|Ga0068871_102163763	Not Available	530	Open in IMG/M
3300009094\|Ga0111539_10051809	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4887	Open in IMG/M
3300009553\|Ga0105249_13202632	Not Available	526	Open in IMG/M
3300009609\|Ga0105347_1321296	Not Available	655	Open in IMG/M
3300009678\|Ga0105252_10372832	Not Available	651	Open in IMG/M
3300010358\|Ga0126370_12349463	Not Available	528	Open in IMG/M
3300010397\|Ga0134124_12577206	Not Available	551	Open in IMG/M
3300010399\|Ga0134127_12296800	Not Available	619	Open in IMG/M
3300010401\|Ga0134121_10841810	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300010403\|Ga0134123_11834279	Not Available	661	Open in IMG/M
3300011432\|Ga0137428_1040026	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1217	Open in IMG/M
3300011438\|Ga0137451_1024364	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1748	Open in IMG/M
3300012175\|Ga0137321_1072780	Not Available	763	Open in IMG/M
3300012532\|Ga0137373_10555646	Not Available	870	Open in IMG/M
3300012914\|Ga0157297_10409239	Not Available	546	Open in IMG/M
3300012961\|Ga0164302_11416007	Not Available	568	Open in IMG/M
3300012971\|Ga0126369_12578950	Not Available	593	Open in IMG/M
3300012986\|Ga0164304_10651062	Not Available	794	Open in IMG/M
3300012987\|Ga0164307_10849061	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	730	Open in IMG/M
3300013296\|Ga0157374_11667349	Not Available	662	Open in IMG/M
3300013308\|Ga0157375_10800787	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1091	Open in IMG/M
3300014318\|Ga0075351_1112734	Not Available	602	Open in IMG/M
3300014326\|Ga0157380_13306005	Not Available	515	Open in IMG/M
3300014969\|Ga0157376_12833524	Not Available	525	Open in IMG/M
3300015372\|Ga0132256_103808489	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	507	Open in IMG/M
3300016341\|Ga0182035_10669789	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	902	Open in IMG/M
3300016387\|Ga0182040_11530075	Not Available	567	Open in IMG/M
3300018073\|Ga0184624_10542607	Not Available	502	Open in IMG/M
3300018432\|Ga0190275_10855512	Not Available	976	Open in IMG/M
3300018476\|Ga0190274_12300841	Not Available	636	Open in IMG/M
3300018481\|Ga0190271_10520910	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1302	Open in IMG/M
3300018481\|Ga0190271_11484150	Not Available	795	Open in IMG/M
3300020082\|Ga0206353_10732813	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerae bacterium RIFOXYB12_FULL_65_16	607	Open in IMG/M
3300022756\|Ga0222622_10167763	All Organisms → cellular organisms → Bacteria → Proteobacteria	1431	Open in IMG/M
3300024179\|Ga0247695_1059158	Not Available	564	Open in IMG/M
3300024317\|Ga0247660_1029156	All Organisms → cellular organisms → Bacteria → Proteobacteria	883	Open in IMG/M
3300025898\|Ga0207692_10111640	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1517	Open in IMG/M
3300025899\|Ga0207642_10104594	All Organisms → cellular organisms → Bacteria → Proteobacteria	1429	Open in IMG/M
3300025903\|Ga0207680_10278376	All Organisms → cellular organisms → Bacteria → Proteobacteria	1162	Open in IMG/M
3300025918\|Ga0207662_10003607	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7998	Open in IMG/M
3300025923\|Ga0207681_11714741	Not Available	525	Open in IMG/M
3300025925\|Ga0207650_11850756	Not Available	510	Open in IMG/M
3300025926\|Ga0207659_10652556	All Organisms → cellular organisms → Bacteria → Proteobacteria	899	Open in IMG/M
3300025931\|Ga0207644_10951484	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	720	Open in IMG/M
3300025940\|Ga0207691_10637149	Not Available	901	Open in IMG/M
3300025949\|Ga0207667_11573194	Not Available	627	Open in IMG/M
3300025960\|Ga0207651_10902595	Not Available	787	Open in IMG/M
3300025960\|Ga0207651_11509096	Not Available	605	Open in IMG/M
3300026023\|Ga0207677_10931051	Not Available	785	Open in IMG/M
3300026075\|Ga0207708_10003508	All Organisms → cellular organisms → Bacteria	11564	Open in IMG/M
3300026075\|Ga0207708_10970995	Not Available	737	Open in IMG/M
3300026142\|Ga0207698_11572887	Not Available	673	Open in IMG/M
3300027617\|Ga0210002_1055564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	687	Open in IMG/M
3300028281\|Ga0247689_1069572	Not Available	506	Open in IMG/M
3300031366\|Ga0307506_10385863	Not Available	570	Open in IMG/M
3300031543\|Ga0318516_10582731	Not Available	639	Open in IMG/M
3300031546\|Ga0318538_10553483	Not Available	624	Open in IMG/M
3300031572\|Ga0318515_10053386	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2039	Open in IMG/M
3300031595\|Ga0265313_10224433	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerae bacterium RIFOXYB12_FULL_65_16	773	Open in IMG/M
3300031681\|Ga0318572_10854952	Not Available	541	Open in IMG/M
3300031716\|Ga0310813_11256250	Not Available	683	Open in IMG/M
3300031719\|Ga0306917_11334745	Not Available	554	Open in IMG/M
3300031751\|Ga0318494_10537566	Not Available	682	Open in IMG/M
3300031771\|Ga0318546_10743133	Not Available	690	Open in IMG/M
3300031793\|Ga0318548_10576255	Not Available	548	Open in IMG/M
3300031797\|Ga0318550_10354781	Not Available	710	Open in IMG/M
3300031833\|Ga0310917_10313540	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1062	Open in IMG/M
3300031835\|Ga0318517_10336186	Not Available	682	Open in IMG/M
3300031845\|Ga0318511_10137356	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1062	Open in IMG/M
3300031879\|Ga0306919_10357666	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1116	Open in IMG/M
3300031894\|Ga0318522_10143843	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	897	Open in IMG/M
3300031896\|Ga0318551_10351127	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	835	Open in IMG/M
3300031908\|Ga0310900_10284448	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	1208	Open in IMG/M
3300031913\|Ga0310891_10150622	Not Available	754	Open in IMG/M
3300031941\|Ga0310912_10511003	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	936	Open in IMG/M
3300031945\|Ga0310913_10392717	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	984	Open in IMG/M
3300032000\|Ga0310903_10708649	Not Available	544	Open in IMG/M
3300032035\|Ga0310911_10775777	Not Available	554	Open in IMG/M
3300032068\|Ga0318553_10190928	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1067	Open in IMG/M
3300032068\|Ga0318553_10569498	Not Available	593	Open in IMG/M
3300032179\|Ga0310889_10485153	Not Available	625	Open in IMG/M
3300033289\|Ga0310914_10436748	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1185	Open in IMG/M
3300034148\|Ga0364927_0186861	Not Available	607	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.23%
Host-Associated	Host-Associated	35.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.72%
Plants	Host-Associated → Plants	35.77%
Aquatic	Environmental → Aquatic	6.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.95%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.01%
Sediment	Environmental → Aquatic → Sediment	5.69%
Freshwater	Environmental → Aquatic → Freshwater	0.81%
Floodplain	Environmental → Terrestrial → Floodplain	0.81%
Roots	Host-Associated → Plants → Roots	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	17.07%
Loam	Environmental → Terrestrial → Soil → Loam	14.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.63%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.81%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	17.07%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.88%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.25%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.63%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	8.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.13%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.69%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.06%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.06%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.06%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.25%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.44%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.63%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.63%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Sediment	0.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.81%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.81%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.81%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2046860005	Sediment microbial communities from Lake Washington, Seattle, for Methane and Nitrogen Cycles, sample from SIP 13C-methane aerobic no nitrate additional fraction	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300012175	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT399_2	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300024317	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK01	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300028281	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK30	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LWAeNNiAF_1797350	2046860005	Freshwater Sediment	GTLFADAAALSTCDSFGLARDRVFTDVGYSLRILHDAFGVYQQLFSIDVAVPLNRREGLATCLGHTVTPIVRPAFSVLLSFLPSF
INPhiseqgaiiFebDRAFT_1049461682	3300000364	Soil	GPLELRGYGADELLALSRAIGRLELRNDLWTGLDWNLLHFTTVRGFAGTLFADVAAIGTCETHALSRDRVYYDVGYSFRVLHDAFGLHQQLLSIDFAVPLNRHDPYAMCLGVPRAPTDRPPFVVLVSFFPSF*
C688J35102_1195156051	3300002568	Soil	ELRGYGADELLALSRAVGRLELRNDFWAGLDWNLLHFTTVRGFAGTVFADVAAIGTCEAHAFSRDRVYYDVGYSLRVLHDAFGLHQQLLSIDFAVPLNRHDPYASCLGVPRAPTDRPPFVVLISFFPSF*
Ga0070658_109507652	3300005327	Corn Rhizosphere	SGLRGYLPSDLLARANVIGRIQLRDDYITELDWNLLHFTTVRGFAGTLFADVAAIGTCDAYGFARDRVFFDVGYSFRVLHDAFGVYQQLFSIDVAVPLNRHQNGATCLGRTPAPVSRPPFVVLLSFVPSF*
Ga0070690_1001211561	3300005330	Switchgrass Rhizosphere	GFAGTLFADVAAIGTCESHGLARDRVFFDVGYSLRVLHDAFGLHQQLLSIDFAVPLNRHDPYASCLNVPRAAADRPPFVVLVSFFPSF*
Ga0070677_100443452	3300005333	Miscanthus Rhizosphere	DELLALSRAVGRLELRDDFWTGLDWNLLHFTTVRGFAGTLFADVAAIGTCESHGLSRDRVYFDVGYSFRVLHDAFGLHQQLLSIDFAVPLNRHDPYASCLNIPRAAADRPPFVVLVSFFPSF*
Ga0070666_104141532	3300005335	Switchgrass Rhizosphere	RGYGADELLARSRVLGRLELRDDYWTGLDWNLLHFTTVRGFAGTLFADAAAIGTCESHGLSRDRVFFDAGYSFRVLHDAFGIHQQLLSIDFAVPLNRHDPYAQCLGVPRAPVSRPPFVVLVSFFPAF*
Ga0070682_1010318271	3300005337	Corn Rhizosphere	AIGTCESYGLSRDRVYFDVGYSLRVLHDAFGIHQQLLSIDFAVPLNRHDPYETCFGRPRVPVSRPPFVVLVSFFPSF*
Ga0068868_1010946171	3300005338	Miscanthus Rhizosphere	ESFGFSRERVYFDAGYSLRVLHDAFGLHQQLFSIDFAVPLNRHDPYAMCLGIPRAPAERPPFVVLVSFFPSF*
Ga0068868_1022942551	3300005338	Miscanthus Rhizosphere	LRGYGADELLARSRAIGRLELRDDYWTGLDWNLLHWTTVRGFGGTLFADVAAIGTCETLAFARDRVYFDVGYSLRVLHDAFGIHQQLLSIDFAVPLNRHDPYETCFGRPRVPVSRPPFVVLVSFFPSF*
Ga0068868_1024393841	3300005338	Miscanthus Rhizosphere	ADELLALSRAVGRLELRDDFWTGLDWNLLHFTTVRGFAGTLFADVAAIGTCESHGLSRDRVYFDVGYSLRVLHDAFGLHQQLLSIDFAVPLNRHDPYASCLNIPRAAADRPPFVVLVSFFPSF*
Ga0070689_1000104361	3300005340	Switchgrass Rhizosphere	GTLFADVAAIGTCESHGLARDRVFFDVGYSLRVLHDAFGLHQQLLSIDFAVPLNRHDPYASCLNVPRAAADRPPFVVLVSFFPSF*
Ga0070692_113636291	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	ELRGYGADELLALSRAIGRVELRNDWWTGLDWNLLHFTTVRGFGGTLFADVAAIGTCETHALSRERVYVDAGFSFRVLHDAFGLHQQLLSIDFAVPLNRHDPYAMCLGIPRAPAERPPFVVLVSFFPSF*
Ga0070671_1001639151	3300005355	Switchgrass Rhizosphere	LALRGYGADELLARSRAIARIELRDDYFTGLDWNLLHFTTVRGFAGTLFADVAAIGTCESFGFSRERVYFDAGYSLRVLHDAFGLHQQLFSIDFAVPLNRHDPYASCLGVPRAAADRPPFVVLVSFFPSF*
Ga0070673_1004177451	3300005364	Switchgrass Rhizosphere	LLHFTTVRGFAGTLFADAAAIGTCESHGLSRDRVFFDAGYSFRVLHDAFGIHQQLLSIDFAVPLNRHDPYAQCLGVPRAPVSRPPFVVLVSFFPAF*
Ga0070659_1002090341	3300005366	Corn Rhizosphere	LFSQLESAGGPLELRGYGADELLALSRAVGRLELRDDFWTGLDWNLLHFTTVRGFAGTLFADVAAIGTCESHGLSRDRVYFDVGYSLRVLHDAFGLHQQLLSIDFAVPLNRHDPYASCLNIPRAAADRPPFVVLVSFFPSF*
Ga0070667_1001095773	3300005367	Switchgrass Rhizosphere	DIRLFAQLVSAGGPLALRGYGADELLARSRVLGRLELRDDYWTGLDWNLLHFTTVRGFAGTLFADAAAIGTCESHGLSRDRVFFDAGYSFRVLHDAFGIHQQLLSIDFAVPLNRHDPYAQCLGVPRAPVSRPPFVVLVSFFPAF*
Ga0070667_1004439572	3300005367	Switchgrass Rhizosphere	FAGTLFADVAAIGTCESHGLARDRVFFDVGYSLRVLHDAFGLHQQLLSIDFAVPLNRHDPYASCLNVPRAAADRPPFVVLVSFFPSF*
Ga0070713_1014793422	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VSGLDWNLLHLTTVRGLAGTVFFDAAAITGCDDYTFTRQNVYYDVGYSFRVLHDAFGVYQQLFSIDFAVPLNRHTSGATCLGRAVTPISGPPFVVLVSFVPSF*
Ga0070710_102976362	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LDWNLLHFTTVRGFAGTLFADAAAIATCESHAFARDRVYFDAGYSFRVLHDAFGIHQQLLSIDFAVPLNRHDPYASCLGHPRVPVSRPPLVVLLSFFPSF*
Ga0070700_1002781121	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	LHFTTVRGFAGTLFADVAAIGTCESHGLSRDRVYFDVGYSFRVLHDAFGLHQQLLSIDFAVPLNRHDPYASCLNIPRAAADRPPFVVLVSFFPSF*
Ga0070700_1009168171	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	LHFTTVRGFAGTLFADVAAIGTCESHGLSRDRVYFDVGYSLRVLHDAFGLHQQLLSIDFAVPLNRHDPYSSCLNIPRAAADRPPFVVLVSFFPSF*
Ga0070700_1018694401	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	ITTCDDYQLSRDRVFADAGYSFRVLHDAFGVHHQLLSIDFAVPLNRHAPYATCLGAPYVEVPRPSFLVWVSFFPSF*
Ga0070694_1016640502	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	YVNGLDWNLLHFTSVRGLAGTLFADIAAIATCDGTALSRDRVFVDVGYSFRVLHDAFGVYQQMFSLDFAVPLNRHAPYATCLGQPVMPIDRPPFTILVSFLPSF*
Ga0068867_1008142771	3300005459	Miscanthus Rhizosphere	LLALSRAVGRLELRDDFWTGLDWNLLHFTTVRGFAGTLFADVAAIGTCESHGLARDRVFFDVGYSLRVLHDAFGLHQQLLSIDFAVPLNRHDPYASCLNVPRAAADRPPFVVLVSFFPSF
Ga0070684_1004726321	3300005535	Corn Rhizosphere	GADELLARSRAIGRVELRDDYFSGLDWNLLHFTTVRGFAGTLFADVAAIGTCDTYGFARDRVFFDVGYSFRVLHDSFGLHQQLLSIDFAVPLNRHAPYATCLDVPIADTDRPPFVVLVSFFPSF*
Ga0070672_1010139232	3300005543	Miscanthus Rhizosphere	ELRGYGADELLALSRAVGRLELRDDFWTGLDWNLLHFTTVRGFAGTLFADVAAIGTCESHGLARDRVFFDVGYSLRVLHDAFGLHQQLLSIDFAVPLNRHDPYASCLNVPRAAADRPPFVVLVSFFPSF*
Ga0070693_1006526402	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	WNLLHFTTVRGFGGTLFADVAAIGTCETHALSRERVYVDAGFSFRVLHDAFGLHQQLLSIDFAVPLNRHDPYASCLNVPRAAADRPPFVVLVSFFPSF*
Ga0070664_1008360542	3300005564	Corn Rhizosphere	GLDWNLLHFTTVRGFGGTLFADVAAIGTCETHALSRERVYVDAGFSFRVLHDAFGLHQQLLSIDFAVPLNRHDPYAMCLGIPRAPAERPPFVVLVSFFPSF*
Ga0068856_1014932032	3300005614	Corn Rhizosphere	FADELLARANVVGSLQLRDDLISGLDWNLLHLTTVRGLAGTAFFDAGAITGCDDYTFTRRNVYYDVGFSFRVMHDAFGVYQQLFSIDLAVPLNRHASGATCLGQPVTPIARPPFVVLVSFVPSF*
Ga0068856_1021123692	3300005614	Corn Rhizosphere	FTSVRGFAGTLFFDAAALTSCDGYAFSRNGVYYDVGYSFRVLHDAFGVYQQLFSIDFAVPLNRHQNGATCLGRMPAPVSRPPFVVLLSFVPSF*
Ga0070702_1001776411	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	TTVRGFAGTLFADAAAIGTCESHGLSRDRVFFDAGYSFRVLHDAFGIHQQLLSIDFAVPLNRHDPYAQCLGVPRAPVSRPPFVVLVSFFPAF*
Ga0068852_1014399381	3300005616	Corn Rhizosphere	NLLHFTTVRGFAGTLFFDAAALTSCDGYNLSRNGVYYDVGYSFRVLHDAFGVYQQLFSIDFAVPLNRHQNGATCLGRTPAPVSRPPFVVLLSFVPSF*
Ga0068864_1015042482	3300005618	Switchgrass Rhizosphere	AAEGSAAFGDIRLFSQLESAGGPLELRGYGADELLARSRALGRIELRDDLWTGLDWNLMHFTTVRGFGGTLFADVGAIGTCETYAFSRERVYFDVGYSFRVLHDAFGLHQQLLSVDVAVPLNRHAPYDRCLDMPIAPTSRPSVVVLVSFFPSF*
Ga0068866_101640792	3300005718	Miscanthus Rhizosphere	YGADELLALSRAVGRLELRDDFWTGLDWNLLHFTTVRGFAGTLFADVAAIGTCESHGLARDRVFFDVGYSLRVLHDAFGLHQQLLSIDFAVPLNRHDPYASCLNVPRAAADRPPFVVLVSFFPSF*
Ga0068861_1004028242	3300005719	Switchgrass Rhizosphere	GFAGTLFADVAAIGTCESHGLSRDRVYFDVGYSLRVLHDAFGLHQQLLSIDFAVPLNRHDPYSSCLNIPRAAADRPPFVVLVSFFPSF*
Ga0068858_1023415641	3300005842	Switchgrass Rhizosphere	AAIGTCETHALSRDRVYYDACFSFRVLHDAFGLHQQLLSIDFAVPLNRHDPYASCLNVPRAAADRPPFVVLVSFFPSF*
Ga0080027_101637681	3300005993	Prmafrost Soil	FTTVRGFGGTLYADAAALTTCEDYAFSRERVFSDVGYSFRVLHDAFGVYQQMLSIDFAVPLNRHASVATCLGRTPQAVSRPPFVVLVSFVPSF*
Ga0066652_1000307651	3300006046	Soil	PAGGPLLLRGYGAEELLSRARVIGRVELRDDYWTGLDWNLLHFTTVRGIAGTVFADAAAIATCDSYALGRDRVYFDAGYSFRVLHDAFGIHQQLLSIDFAVPLNRHDPYATCLDIPRAASSRPPFVVLVSFFPSF*
Ga0068871_1021637632	3300006358	Miscanthus Rhizosphere	ELLARAHVLGRLELRDDYVTGLDWSLLHFTTVRGFAGTLFADAAAISTCESHGLSRDRVYFDAGYSLRVLHDAFGIYQQLLSIDFAVPLNRHDPYATCLGVPRAATTRPSFVVLVSFFPSF*
Ga0111539_100518091	3300009094	Populus Rhizosphere	TAGGPLALRGYGADELLARSRAIGRIELRNDYWTGLDWNLLHWTTVRGFGGTLFADVAAIGTCETLAFARDRVYFDVGYSLRVLHDSFGIHQQLLSIDVAVPLNRHDPYATCLGIPRAAVDRPPFTVLVSFFPSF*
Ga0105249_132026322	3300009553	Switchgrass Rhizosphere	ALSRAVGRLELRDDFWTGLDWNLLHFTTVRGFAGTLFADVAAIGTCESHGLSRDRVYFDVGYSFRVLHDAFGLHQQLLSIDFAVPLNRHDPYASCLNIPRAAADRPPFVVLVSFFPSF*
Ga0105347_13212961	3300009609	Soil	TLFADVAAIGTCETLGFARDRVYFDVGYSLRVLHDSFGIHQQLLSIDFAVPLNRHDPYAMCLGIPRAPVDRPPFTVLISFFPSF*
Ga0105252_103728321	3300009678	Soil	WNLLHWTTVRGFGGTLFADVAAIGTCETLGFARDRVYFDVGYSLRVLHDSFGIHQQLLSIDFAVPLNRHDPYAMCLGIPRAPVDRPPFTVLISFFPSF*
Ga0126370_123494631	3300010358	Tropical Forest Soil	NAMASVQLRDDYVTGLDWNLLHLTTVRGFGGTLFADGAAISTCDGYSFSRDRLYADVGYSLRVLHDAFGVYQQLFSIDVAVPLNRHAPYATCLGHPVAPAARQPFTVLVSFFPSF*
Ga0134124_125772061	3300010397	Terrestrial Soil	VRGFAGTLFADVAAIGTCETHALSRDRVYYDVGYSFRVLHDAFGLHQQLLSIDLAVPLNRHDPYAMCLGVPRAPTDRPPFVVLVSFFPSF*
Ga0134127_122968002	3300010399	Terrestrial Soil	LFADVAAIGTCESHGLARDRVFFDVGYSLRVLHDAFGLHQQLLSIDFAVPLNRHDPYASCLNVPRAAADRPPFVVLVSFFPSF*
Ga0134121_108418101	3300010401	Terrestrial Soil	LDWNLLHFTTVRALAGTLFADAAAITSCDGYDFSRRNVYYDVGYSFRVLHDAFGVYQQLLSIDFAVPLNRRPAAEMPPCLGSVPVAVARPSFVVLVSFLPSF*
Ga0134123_118342792	3300010403	Terrestrial Soil	GRLELRDDFWTGLDWNLLHFTTVRGFAGTLFADVAAIGTCESHGLSRDRVYFDVGYSLRVLHDAFGLHQQLLSIDFAVPLNRHDPYSSCLNIPRAAADRPPFVVLVSFFPSF*
Ga0137428_10400262	3300011432	Soil	AQLPTAGGPLALRGYGADELLARSRAIGRLELRNDYWTGLDWNLLHWTTVRGFGGTLFADVAAIGTCETLGFARDRVYFDVGYSLRVLHDSFGIHQQLLSIDFAVPLNRHDPYAMCLGIPRAPVDRPPFTVLISFFPSF*
Ga0137451_10243642	3300011438	Soil	LFADVAAISTCDSFGFSRERVYFDAGYSFRVLHDAFGLHQQLLSIDFAVPLNRHAPYTTCLGVPIADTNRPPFVVLVSFFPSF*
Ga0137321_10727802	3300012175	Soil	IGTCETLGFARDRVYFDVGYSLRVLHDSFGIHQQLLSIDFAVPLNRHDPYAMCLGIPRAPVDRPPFTVLISFFPSF*
Ga0137373_105556462	3300012532	Vadose Zone Soil	RVQLRDDYVSGLDWNLLHFTTVRGFAGTLFADVAAIGTCEAHAFSRDRVYYDVGYSLRVLHDAFGLHQQLLSIDLAVPLNRHDPYASCLGVPRAPTDRPPFVVLISFFPSF*
Ga0157297_104092391	3300012914	Soil	LLGRSRAIGRVELRDDYWTGLDWNLMHFTTVRGFGGTLFADVAAIGTCETLAFARDRVYFDVGYSLRVLHDSFGIHQQLLSIDFAVPLNRHDPYAMCLGIPRAPVDRPPFTVLVSFFPSF
Ga0164302_114160071	3300012961	Soil	AGGPLALRGYGADELLARSRAIARIELRDDYFTGLDWNLLHFTTVRGFAGTLFADVAAIGTCESFGFSRERVYFDAGYSLRVLHDAFGLHQQLFSIDFAVPLNRHDPYASCLGVPRAAADRQPFVVLVSFFPSF*
Ga0126369_125789502	3300012971	Tropical Forest Soil	ELRDDYITGLDWNLLHFTTVRGFAGTLFADAAAIATCESISFARDRVFFDAGYSFRVLHDAFGIHQQLLSIDVAVPLNRHDPYASCLGHPRMPVSRPPVVVLVSFFPSF*
Ga0164304_106510621	3300012986	Soil	DDYITGLDWNLLHFTTVRGIAGTLFADAAAIGTCESYGLSRDRVYFDVGYSLRVLHDAFGIHQQLLSIDFAVPLNRHDPYETCFGRPRVPVSRPPFVVLVSFFPSF*
Ga0164307_108490612	3300012987	Soil	ALRGYGADELLARSRAIARIELRDDYFTGLDWNLLHFTTVRGFAGTLFADVAAIGTCESFGFSRERVYFDAGYSLRVLHDAFGLHQQLFSIDFAVPLNRHDPYASCLGVPRAAADRPPFVVLVSFFPSF*
Ga0157374_116673492	3300013296	Miscanthus Rhizosphere	LLHFTTVRGFGGTLFADVAAIGTCETHALSRERVYVDAGFSFRVLHDAFGLHQQLLSIDFAVPLNRHDPYAMCLGIPRAPAERPPFVVLVSFFPSF*
Ga0157375_108007872	3300013308	Miscanthus Rhizosphere	DDFWTGLDWNLLHFTTVRGFAGTLFADVAAIGTCESHGLSRDRVYFDVGYSLRVLHDAFGLHQQLLSIDFAVPLNRHDPYSSCLNIPRAAADRPPFVVLVSFFPSF*
Ga0075351_11127342	3300014318	Natural And Restored Wetlands	WNLLHFTTVRGFAGTLFADATAIATCESYGLSRDRVYFDAGYSVRVLHDAFGIHQQLLALSFAVPLNRHDPYTQCLDITRAPVSRPPFVVMLSFFPSF*
Ga0157380_133060051	3300014326	Switchgrass Rhizosphere	ATFGDIRLASQLTGAGGALGLRGYSANELLARARIIGRLQLRNDYVTGLDWNLLHFTTVRGIAGTLFADVAAITTCDDYHFSRERIFADAGYSFRVLHDAFGVHHQLLSIDVAVPLNRHAPYATCLGAPYADVPRPSVLVRVSFFPSF*
Ga0157376_128335242	3300014969	Miscanthus Rhizosphere	GLDWNLLHFTTVRGFAGTLFADVAAIGTCETHALSRDRVYYDVGYSFRVLHDAFGLHQQLLSIDLAVPLNRHDPYAMCLGVPRAPTDRPPFVVLVSFFPSF*
Ga0132256_1038084891	3300015372	Arabidopsis Rhizosphere	ALSRAVGRLELRNDFFTGLDWNLLHFTTVRGFAGTLFADVAAIGTCESHGLSRDRVYFDVGYSLRILHDAFGLHQQLLSIDFAAPLNRHDPYASCLNIPRAAADRNVQQIPPIQNSGIGL
Ga0182035_106697892	3300016341	Soil	GTLFADGAAISTCDGYAFSRDRLYADVGYSLRVLHDAFGVYQQLFSIDVAVPLDRHAPYATCLGHPVAPAARQPFTVLVSFFPSF
Ga0182040_115300751	3300016387	Soil	TGGPAAMRGYAADELLSRANAMASVQLRDDYVTGLDWNLLHLTTVRGFGGTLFADGAAISTCDGYSFSRDRLYADVGYSLRVLHDAFSVYQQLFSIDVAVPLNRHAPYATCLGHPVAPAARQPFTVLVSFFPSF
Ga0184624_105426071	3300018073	Groundwater Sediment	GLRGFSTDELLARARLIGRLQLRNDYVTGLDWNMLHFTTVRGIAGTLFADIAAITTCDDYHFSRERVFADAGYSFRVLHDAFGVHHQLLSIDVAVPINRHAPYASCLGAPYAEVPRPSYLVRVSFFPSF
Ga0190275_108555121	3300018432	Soil	VLAAAVEGAATFGDLRLANQLTGAGGPQGLRGFSTDELLARARVIGRLQLRNDYVTGLDWNLLHFTTVRGIAGTLFADVAAITTCDGYDFSRDRLFADVGYSFRVLHDAFGVHHQLLSIDVAVPLNRHAPYATCLGAPYAEVPRPSYLVRVSFFPSF
Ga0190274_123008411	3300018476	Soil	TVRGIAGTLFADVAAITTCDDYQFSRDRIFADVGYSFRVLHDAFGVHHQLLSIDVAVPLNRHAPYATCLGAPYAEVPRPSYLVRVSFFPSF
Ga0190271_105209101	3300018481	Soil	LELRNDYWTGLDWNLLHWTTVRGFGGTLFADVAAIGTCETFGFARDRVYFDVGYSLRVLHDSFGIHQQLLSIDFAVPLNRHDPYAACLGIPRAAVDRPPFTVLVSFFPSF
Ga0190271_114841502	3300018481	Soil	QLRNDYVTGLDWNMLHFTTVRGIAGTLFADVAAITTCDDYQFSRDRLFADIGYSFRVLHDAFGVHHQLLSIDVAVPLNRHAPYATCLGAPYAEVPRPSYLVRVSFFPSF
Ga0206353_107328132	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	PGGLRGYFADELLARATFIGSLQLRDDYVSGLDWNLLHFTTVRGFAGTLFFDAAALTSCDGYNLSRNGVYYDVGYSFRVLHDAFGVYQQLFSIDFAVPLNRHQNGATCLGRTPAPVSRPPFVVLLSFVPSF
Ga0222622_101677632	3300022756	Groundwater Sediment	EGNVTFGDIGLLSQLMSAGGPLALRGYGADELLARSRALGRIELRDDLWTGLDWNLLHFTTVRGFGGTLFADVGAIGTCESYAFSRDRVYFDVGYSLRVLHDSFGIHQQLLSIDFAVPLNRHAPYATCLNVPIADTNRPPFVVLLSFFPSF
Ga0247695_10591581	3300024179	Soil	GGPLELRGYGAEELLARSRAIGRLELRDDFWTGLDWNLLHFTTVRGFAGTLFADVAAIGTCESHGLSRDRVFFDAGYSFRVLHDAFGLHQQLLSIDFAVPLNRHDPYASCLGVPRAATDRPPFVVLVSFFPSF
Ga0247660_10291562	3300024317	Soil	TTVRGFAGTLFADVAAIGTCESHGLSRDRVFFDAGYSFRVLHDAFGLHQQLLSIDFAVPLNRHDPYASCLGVPRAATDRPPFVVLVSFFPSF
Ga0207692_101116401	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	DYVTGLDWNLLHFTTVRGFAGTLFADAAAIATCESHAFARDRVYFDAGYSFRVLHDAFGIHQQLLSIDFAVPLNRHDPYASCLGHPRVPVSRPPLVVLLSFFPSF
Ga0207642_101045941	3300025899	Miscanthus Rhizosphere	SQLESAGGPLELRGYGADELLALSRAVGRLELRDDFWTGLDWNLLHFTTVRGFAGTLFADVAAIGTCESHGLARDRVFFDVGYSLRVLHDAFGLHQQLLSIDFAVPLNRHDPYASCLNVPRAAADRPPFVVLVSFFPSF
Ga0207680_102783762	3300025903	Switchgrass Rhizosphere	RGYGADELLARSRVLGRLELRDDYWTGLDWNLLHFTTVRGFAGTLFADAAAIGTCESHGLSRDRVFFDAGYSFRVLHDAFGIHQQLLSIDFAVPLNRHDPYAQCLGVPRAPVSRPPFVVLVSFFPAF
Ga0207662_1000360710	3300025918	Switchgrass Rhizosphere	YWTGLDWNLLHFTTVRGFAGTLFADAAAIGTCESHGLSRDRVFFDAGYSFRVLHDAFGIHQQLLSIDFAVPLNRHDPYAQCLGVPRAPVSRPPFVVLVSFFPAF
Ga0207681_117147412	3300025923	Switchgrass Rhizosphere	GFAGTLFADVAAIGTCESHGLSRDRVYFDVGYSLRVLHDAFGLHQQLLSIDFAVPLNRHDPYASCLNIPRAAADRPPFVVLVSFFPSF
Ga0207650_118507561	3300025925	Switchgrass Rhizosphere	AATFGDIRLASQLTGAGGPLGLRGFATDELLARSRIIARLQLRNDYVAGLDWNMLHFTTVRGIAGTLFADVAAITTCDDYQFARDRIFADAGYSFRVLHDAFGVHHQLLSIDVAVPLNRHAPYTTCLGAPYAEVPRPSFLVRVSFFPSF
Ga0207659_106525561	3300025926	Miscanthus Rhizosphere	DWNLLHFTTVRGFAGTLFADVAAIGTCESHGLARDRVFFDVGYSLRVLHDAFGLHQQLLSIDFAVPLNRHDPYASCLNVPRAAADRPPFVVLVSFFPSF
Ga0207644_109514841	3300025931	Switchgrass Rhizosphere	DDYFTGLDWNLLHFTTVRGFAGTLFADVAAIGTCESFGFSRERVYFDAGYSLRVLHDAFGLHQQLFSIDFAVPLNRHDPYASCLGVPRAAADRPPFVVLVSFFPSF
Ga0207691_103692602	3300025940	Miscanthus Rhizosphere	AEGSAAFGDIRLFSQLESAGGPTELRGYGADELLALSRAVGRLELRDDFWTGLDWNLLHFTTVRGFAGTLFADVAAIGTCESHGLARDRVFFDVGYSLRVLHDAFGLHQQLLSIDFAVPLNRHDPYASCLNVPRAAADRPPFVVLVSFFPSF
Ga0207691_106371492	3300025940	Miscanthus Rhizosphere	ALRGYGADELLARSRAIGRLELRDDYWTGLDWNLLHWTTVRGFGGTLFADVAAIGTCETLAFARDRVYFDVGYSLRVLHDSFGIHQQLLSIDFAVPLNRHDPYASCLGIPRAPVDRPPFTVLVSFFPSF
Ga0207667_115731941	3300025949	Corn Rhizosphere	LDWNLLHFTTVRGFAGTLFADVAAIGTCESHGLSRDRVYFDVGYSLRVLHDAFGLHQQLLSIDFAVPLNRHDPYSSCLNIPRAAADRPPFVVLVSFFPSF
Ga0207651_109025951	3300025960	Switchgrass Rhizosphere	SATFGDIQLFAQLPTAGGPLALRGYGADELLARSRAIGRLELRDDYWTGLDWNLLHWTTVRGFGGTLFADVAAIGTCETLAFARDRVYFDVGYSLRVLHDSFGIHQQLLSIDFAVPLNRHDPYASCLNIPRAPVDRPPFTVLVSFFPSF
Ga0207651_115090961	3300025960	Switchgrass Rhizosphere	LLHFTTVRGFAGTLFADAAAIGTCESHGLSRDRVFFDAGYSFRVLHDAFGIHQQLLSIDFAVPLNRHDPYAQCLGVPRAPVSRPPFVVLVSFFPAF
Ga0207677_109310511	3300026023	Miscanthus Rhizosphere	GDIRLFSQLESAGGPLELRGYGADELLALSRAVGRLELRDDFWTGLDWNLLHFTTVRGFAGTLFADVAAIGTCESHGLARDRVFFDVGYSLRVLHDAFGLHQQLLSIDFAVPLNRHDPYASCLNVPRAAADRPPFVVLVSFFPSF
Ga0207708_100035081	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	GFAGTLFADVAAIGTCESHGLSRDRVYFDVGYSFRVLHDAFGLHQQLLSIDFAVPLNRHDPYASCLNIPRAAADRPPFVVLVSFFPSF
Ga0207708_109709952	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	GFAGTLFADVAAIGTCESHGLSRDRVYFDVGYSLRVLHDAFGLHQQLLSIDFAVPLNRHDPYSSCLNIPRAAADRPPFVVLVSFFPSF
Ga0207698_115728872	3300026142	Corn Rhizosphere	FAGTLFADVAAIGTCESHGLSRDRVYFDVGYSFRVLHDAFGLHQQLLSIDFAVPLNRHDPYASCLNIPRAAADRPPFVVLVSFFPSF
Ga0210002_10555642	3300027617	Arabidopsis Thaliana Rhizosphere	EGGIAFGDIRLFSQLESAGGPLELRGYGADELLALSRAVGRLELRDDFWTGLDWNLLHFTTVRGFAGTLFADVAAIGTCESHGLSRDRVYFDVGYSLRVLHDAFGLHQQLLSIDFAVPLNRHDPYASCLNVPRAAADRPPFVVLVSFFPTF
Ga0247689_10695721	3300028281	Soil	RGFAGTLFADVAAIGTCESHGLSRDRVFFDAGYSFRVLHDAFGLHQQLLSIDFAVPLNRHDPYASCLGVPRAATDRPPFVVLVSFFPSF
Ga0307506_103858631	3300031366	Soil	SRAIGRLELRDDYWTGLDWNLLHWTTVRGFGGTLFADVAAIGTCETLAFARDRVYFDVGYSLRVLHDSFGIHQQLLSIDFAVPLNRHDPYAMCLGIPRAPVDRPPFTVLVSFFPSF
Ga0318516_105827311	3300031543	Soil	VQLRDDYVTGLDWNLLHLTTVRGFGGTLFADGAAISTCDGYSFSRDRLYADVGYSLRVLHDAFGVYQQLFSIDVAVPLNRHAPYATCLGHPVAPAARQPFTVLVSFFPSF
Ga0318538_105534832	3300031546	Soil	LLHLTTVRGFGGTLFADGAAISTCDGYSFSRDRLYADVGYSLRVLHDAFGVYQQLFSIDVAVPLNRHAPYATCLGHPVAPAARQPFTVLVSFFPSF
Ga0318515_100533862	3300031572	Soil	VRGFGGTLFADGAAISTCDGYSFSRDRLYADVGYSLRVLHDAFGVYQQLFSIDVAVPLNRHAPYATCLGHPVAPAARQPFTVLVSFFPSF
Ga0265313_102244331	3300031595	Rhizosphere	LLSRAHLLGSLQLRDDYVSGLDWNLLHFTTVRGFAGTLFADAAAITTCDAYGFSTERIYYDVGYSFRVLHDAFGVYQQLLSIDFAVPLNRPAAAGTCLGRVQQAVSRPPFVVLVSFVPSF
Ga0318572_108549522	3300031681	Soil	LTTVRGFGGTLFADGAAISTCDGYSFSRDRLYADVGYSLRVLHDAFGVYQQLFSIDVAVPLNRHAPYATCLGHPVAPAARQPFTVLVSFFPSF
Ga0310813_112562501	3300031716	Soil	GGPAALRGYATDELLSRAFVLGRLELRDDYVSGLDWNLLHFTTVRGFAGTLFADATAIATCESYGLSRERVYFDAGYSFRVLHDAFGIQQQLLSINVAVPLNRHDPYASCLNIPRAPVSRPLVVVLLSFFPSF
Ga0306917_113347451	3300031719	Soil	ATGGPAAMRGYAADELLSRANAMASVQLRDDYVTGLDWNLLHLTTVRGFAGTLFADGAAISTCDGYAFSRDRLYADVGYSLRVLHDAFGVYQQLFSIDVAVPLDRHAPYATCLGHPVAPAARQPFTVLVSFFPSF
Ga0318494_105375661	3300031751	Soil	NAMASVQLRDDYVTGLDWNLLHLTTVRGFAGTLFADGAAISTCDGYAFSRDRLYADVGYSLRVLHDAFGVYQQLFSIDVAVPLDRHAPYATCLGHPVAPAARQPFTVLVSFFPSF
Ga0318546_107431332	3300031771	Soil	GPPVAMRGYAADELLSRANAMASVQLRDDYVTGLDWNLLHLTTVRGFGGTLFADGAAISTCDGYSFSRDRLYADVGYSLRVLHDAFGVYQQLFSIDVAVPLNRHAPYATCLGHPVAPAARQPFTVLVSFFPSF
Ga0318548_105762551	3300031793	Soil	SGDLRLTSQLIATGGPAAMRGYAADELLSRANAMASVQLRDDYVTGLDWNLLHLTTVRGFAGTLFADGAAISTCDGYSFSRDRLYADVGYSLRVLHDAFGVYQQLFSIDVAVPLNRHAPYATCLGHPVAPAARQPFTVLVSFFPSF
Ga0318550_103547811	3300031797	Soil	GHVLGLDALAGVTSGDLRLTSQLIATGGPAAMRGYAADELLSRANAMASVQLRDDYVTGLDWNLLHLTTVRGFGGTLFADGAAISTCDGYSFSRDRLYADVGYSLRVLHDAFGVYQQLFSIDVAVPLNRHAPYATCLGHPVAPAARQPFTVLVSFFPSF
Ga0310917_103135402	3300031833	Soil	DDYVTGLDWNLLHLTTVRGFGGTLFADGAAISTCDGYSFSRDRLYADVGYSLRVLHDAFGVYQQLFSIDVAVPLNRHAPYATCLGHPVAPAARQPFTVLVSFFPSF
Ga0318517_103361862	3300031835	Soil	ADELLSRANAMASVQLRDDYVTGLDWNLLHLTTVRGFAGTLFADGAAISTCDGYSFSRDRLYADVGYSLRVLHDAFGVYQQLFSIDVAVPLNRHAPYATCLGHPVAPAARQPFTVLVSFFPSF
Ga0318511_101373561	3300031845	Soil	LLSRANAMASVQLRDDYVTGLDWNLLHLTTVRGFGGTLFADGAAISTCDGYSFSRDRLYADVGYSLRVLHDAFGVYQQLFSIDVAVPLNRHAPYATCLGHPVAPAARQPFTVLVSFFPSF
Ga0306919_103576661	3300031879	Soil	FGGTLFADGAAISTCDGYSFSRDRLYADVGYSLRVLHDAFGVYQQLFSIDVAVPLNRHAPYATCLGHPVAPAARQPFTVLVSFFPSF
Ga0318522_101438432	3300031894	Soil	GAANAMASVQLRDDYVTGLDWNLLHLTTVRGFGGTLFADGAAISTCDGYSFSRDRLYADVGYSLRVLHDAFGVFQQLFSIDVAVPLNRHAPYATCLGHPVAPAARQPFTVLVSFFPSF
Ga0318551_103511271	3300031896	Soil	TTVRGFGGTLFADGAAISTCDGYSFSRDRLYADVGYSLRVLHDAFGVYQQLFSIDVAVPLNRHAPYATCLGHPVAPAARQPFTVLVSFFPSF
Ga0310900_102844481	3300031908	Soil	PLALRGYAADELLARSRAIGRLELRNDYWTGLDWNLLHWTTVRGFGGTLFADVAAIGTCETLAFARDRVYFDVGYSLRVLHDSFGIHQQLLSIDFAVPLNRHDPYASCLGIPRAPVDRPPFTVLVSFFPSF
Ga0310891_101506222	3300031913	Soil	IGTCESHGLSRDRVYFDVGYSLRVLHDAFGLHQQLLSIDFAVPLNRHDPYSSCLNIPRAAADRPPFVVLVSFFPSF
Ga0310912_105110031	3300031941	Soil	GAAISTCDGYSFSRDRLYADVGYSLRVLHDAFGVYQQLFSIDVAVPLNRHAPYATCLGHPVAPAARQPFTVLVSFFPSF
Ga0310913_103927172	3300031945	Soil	GGTLFADGAAISTCDGYSFSRDRLYADVGYSLRVLHDAFGVYQQLFSIDVAVPLNRHAPYATCLGHPVAPAARQPFTVLVSFFPSF
Ga0310903_107086492	3300032000	Soil	FGDIRLFSQLESAGGPLELRGYGADELLALSRAVGRLELRDDFWTGLDWNLLHFTTVRGFAGTLFADVAAIGTCESHGLSRDRVYFDVGYSLRVLHDAFGLHQQLLSIDFAVPLNRHDPYSSCLNIPRAAADRPPFVVLVSFFPSF
Ga0310911_107757772	3300032035	Soil	RDDYVTGLDWNLLHLTTVRGFGGTLFADGAAISTCDGYSFSRDRLYADVGYSLRVLHDAFGVYQQLFSIDVAVPLNRHAPYATCLGHPVAPAARQPFTVLVSFFPSF
Ga0318553_101909281	3300032068	Soil	RWPAAMRGYAADELLSRANAMASVQLRDDYVTGLDWNLLHLTTVRGFGGTLFADGAAISTCDGYSFSRDRLYADVGYSLRVLHDAFGVYQQLFSIDVAVPLNRHAPYATCLGHPVAPAARQPFTVLVSFFPSF
Ga0318553_105694981	3300032068	Soil	YVTGLDWNLLHLTTVRGFAGTLFADGAAISTCDGYAFSRDRLYADVGYSLRVLHDAFGVYQQLFSIDVAVPLDRHAPYATCLGHPVAPAARQPFTVLVSFFPSF
Ga0310889_104851532	3300032179	Soil	AGGPLELRGYGADELLALSRAVGRLELRDDFWTGLDWNLLHFTTVRGFAGTLFADVAAIGTCESHGLSRDRVYFDVGYSLRVLHDAFGLHQQLLSIDFAVPLNRHDPYSSCLNIPRAAADRPPFVVLVSFFPSF
Ga0310914_104367481	3300033289	Soil	AMRGYAADELLSRANAMASVQLRDDYVTGLDWNLLHLTTVRGFGGTLFADGAAISTCDGYAFSRDRLYADVGYSLRVLHDAFGVYQQLFSIDVAVPLNRHAPYATCLGRPVAPAARQPFTVLVSFFPSF
Ga0364927_0186861_3_269	3300034148	Sediment	GFGGTLFADVAAIGTCETLAFARDRVYFDVGYSFRVLHDSFGIHQQLLSIDFAVPLNRHDPYASCLGIPRAAVDRPPFTVLVSFFPSF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070168

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences