Metagenome / Metatranscriptome Family F070124

Basic Information
Family ID	F070124
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	38 residues
Representative Sequence	MEKNQTNLEDLIKKMENLPVPERTCNIDDETCESCSG
Number of Associated Samples	98
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	11.38 %
% of genes from short scaffolds (< 2000 bps)	60.16 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (55.285 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (23.577 % of family members)
Environment Ontology (ENVO)	Unclassified (80.488 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (89.431 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.32% β-sheet: 0.00% Coil/Unstructured: 75.68%
Feature Viewer

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Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF01510	Amidase_2	46.34
PF13385	Laminin_G_3	8.94
PF14550	Peptidase_S78_2	4.88
PF12684	DUF3799	3.25
PF04466	Terminase_3	2.44
PF02562	PhoH	0.81
PF03592	Terminase_2	0.81
PF03382	DUF285	0.81
PF02195	ParBc	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG1783	Phage terminase large subunit	Mobilome: prophages, transposons [X]	2.44
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	0.81
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	0.81
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.28 %
All Organisms	root	All Organisms	44.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.28 %
cellular organisms	root	All Organisms → cellular organisms	27.64 %
Viruses	superkingdom	All Organisms → Viruses	17.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.28 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	21.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.13 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	7.32 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	5.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.28 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	20.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.13 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	7.32 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	5.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.28 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	20.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.13 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	7.32 %
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	5.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.28 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	20.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.13 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	7.32 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	5.69 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.28 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	17.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.13 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	7.32 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	5.69 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.28 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	17.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.13 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	7.32 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	5.69 %
Pusillimonas (ex Stolz et al. 2005)	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005)	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.28 %
Crocinitomicaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae	17.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.13 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	7.32 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	5.69 %
unclassified Pusillimonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.28 %
unclassified Crocinitomicaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae	17.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.13 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	7.32 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	5.69 %
Pusillimonas sp. (ex Stolz et al. 2005)	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. (ex Stolz et al. 2005)	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.28 %
Crocinitomicaceae bacterium TMED209	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED209	17.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.13 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	7.32 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	5.69 %
Pusillimonas sp. (ex Stolz et al. 2005)	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. (ex Stolz et al. 2005)	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2236876001\|none_p340448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. (ex Stolz et al. 2005)	526	Open in IMG/M
3300000101\|DelMOSum2010_c10007133	Not Available	7632	Open in IMG/M
3300000101\|DelMOSum2010_c10012092	Not Available	5470	Open in IMG/M
3300000116\|DelMOSpr2010_c10030772	All Organisms → Viruses → Predicted Viral	2512	Open in IMG/M
3300000116\|DelMOSpr2010_c10058075	Not Available	1644	Open in IMG/M
3300000117\|DelMOWin2010_c10022709	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	3222	Open in IMG/M
3300001450\|JGI24006J15134_10000630	Not Available	21554	Open in IMG/M
3300001460\|JGI24003J15210_10001127	Not Available	11652	Open in IMG/M
3300001472\|JGI24004J15324_10031253	Not Available	1724	Open in IMG/M
3300001589\|JGI24005J15628_10140702	Not Available	747	Open in IMG/M
3300001965\|GOS2243_1076261	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1816	Open in IMG/M
3300002231\|KVRMV2_100986451	Not Available	506	Open in IMG/M
3300005738\|Ga0076926_119435	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED209	602	Open in IMG/M
3300005837\|Ga0078893_10654111	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	811	Open in IMG/M
3300005837\|Ga0078893_10959833	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1947	Open in IMG/M
3300006467\|Ga0099972_13007658	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED209	928	Open in IMG/M
3300006622\|Ga0101442_127641	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2563	Open in IMG/M
3300006734\|Ga0098073_1000505	Not Available	13280	Open in IMG/M
3300006735\|Ga0098038_1014080	Not Available	3092	Open in IMG/M
3300006735\|Ga0098038_1292078	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	507	Open in IMG/M
3300006737\|Ga0098037_1003325	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	6843	Open in IMG/M
3300006752\|Ga0098048_1011943	All Organisms → Viruses → Predicted Viral	3040	Open in IMG/M
3300006752\|Ga0098048_1026159	All Organisms → Viruses → Predicted Viral	1921	Open in IMG/M
3300006789\|Ga0098054_1048257	All Organisms → Viruses → Predicted Viral	1634	Open in IMG/M
3300006793\|Ga0098055_1025143	Not Available	2507	Open in IMG/M
3300006802\|Ga0070749_10000353	Not Available	30598	Open in IMG/M
3300006802\|Ga0070749_10012828	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	5388	Open in IMG/M
3300006810\|Ga0070754_10113016	Not Available	1329	Open in IMG/M
3300006916\|Ga0070750_10003994	Not Available	8097	Open in IMG/M
3300006916\|Ga0070750_10111295	Not Available	1262	Open in IMG/M
3300006924\|Ga0098051_1088964	Not Available	833	Open in IMG/M
3300007276\|Ga0070747_1019322	Not Available	2791	Open in IMG/M
3300007276\|Ga0070747_1164314	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED209	794	Open in IMG/M
3300007344\|Ga0070745_1120679	All Organisms → Viruses → Predicted Viral	1010	Open in IMG/M
3300007540\|Ga0099847_1242258	Not Available	519	Open in IMG/M
3300009002\|Ga0102810_1233388	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300009505\|Ga0115564_10275726	Not Available	849	Open in IMG/M
3300009507\|Ga0115572_10166459	Not Available	1287	Open in IMG/M
3300009550\|Ga0115013_10191286	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED209	1220	Open in IMG/M
3300009790\|Ga0115012_10003463	Not Available	9346	Open in IMG/M
3300010149\|Ga0098049_1149892	Not Available	721	Open in IMG/M
3300010150\|Ga0098056_1138002	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	825	Open in IMG/M
3300010392\|Ga0118731_113246483	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED209	667	Open in IMG/M
3300011128\|Ga0151669_122638	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED209	683	Open in IMG/M
3300011261\|Ga0151661_1035741	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED209	1856	Open in IMG/M
3300012920\|Ga0160423_10883982	Not Available	600	Open in IMG/M
3300017708\|Ga0181369_1113707	Not Available	554	Open in IMG/M
3300017714\|Ga0181412_1048117	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1089	Open in IMG/M
3300017714\|Ga0181412_1129067	Not Available	578	Open in IMG/M
3300017717\|Ga0181404_1073598	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED209	847	Open in IMG/M
3300017726\|Ga0181381_1000049	Not Available	33032	Open in IMG/M
3300017726\|Ga0181381_1051990	Not Available	898	Open in IMG/M
3300017727\|Ga0181401_1073912	Not Available	896	Open in IMG/M
3300017728\|Ga0181419_1000679	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	11901	Open in IMG/M
3300017728\|Ga0181419_1088593	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED209	769	Open in IMG/M
3300017741\|Ga0181421_1089810	Not Available	802	Open in IMG/M
3300017743\|Ga0181402_1006682	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3618	Open in IMG/M
3300017743\|Ga0181402_1040442	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1276	Open in IMG/M
3300017749\|Ga0181392_1015185	Not Available	2486	Open in IMG/M
3300017749\|Ga0181392_1152976	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED209	675	Open in IMG/M
3300017753\|Ga0181407_1003174	Not Available	5025	Open in IMG/M
3300017758\|Ga0181409_1004937	Not Available	4678	Open in IMG/M
3300017769\|Ga0187221_1229182	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED209	530	Open in IMG/M
3300017772\|Ga0181430_1178033	Not Available	612	Open in IMG/M
3300017781\|Ga0181423_1005107	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5818	Open in IMG/M
3300017782\|Ga0181380_1123449	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED209	890	Open in IMG/M
3300017783\|Ga0181379_1096038	Not Available	1089	Open in IMG/M
3300018416\|Ga0181553_10647786	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED209	555	Open in IMG/M
3300018642\|Ga0188867_1007984	Not Available	539	Open in IMG/M
3300020166\|Ga0206128_1001122	Not Available	28212	Open in IMG/M
3300020182\|Ga0206129_10088941	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1674	Open in IMG/M
3300020258\|Ga0211529_1000818	Not Available	5324	Open in IMG/M
3300020347\|Ga0211504_1099797	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED209	654	Open in IMG/M
3300020347\|Ga0211504_1112827	Not Available	607	Open in IMG/M
3300020347\|Ga0211504_1123621	Not Available	574	Open in IMG/M
3300020442\|Ga0211559_10016208	All Organisms → Viruses → Predicted Viral	3794	Open in IMG/M
3300020469\|Ga0211577_10017671	Not Available	5683	Open in IMG/M
3300020469\|Ga0211577_10566540	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	680	Open in IMG/M
3300020474\|Ga0211547_10026501	Not Available	3219	Open in IMG/M
3300021085\|Ga0206677_10000718	Not Available	31490	Open in IMG/M
3300021185\|Ga0206682_10276319	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED209	738	Open in IMG/M
3300021335\|Ga0213867_1020221	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED209	2728	Open in IMG/M
3300021373\|Ga0213865_10024752	All Organisms → Viruses → Predicted Viral	3384	Open in IMG/M
3300021373\|Ga0213865_10024850	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	3377	Open in IMG/M
3300021373\|Ga0213865_10028012	All Organisms → Viruses	3168	Open in IMG/M
3300021373\|Ga0213865_10047439	Not Available	2384	Open in IMG/M
3300021957\|Ga0222717_10000709	Not Available	28533	Open in IMG/M
3300022057\|Ga0212025_1060557	Not Available	654	Open in IMG/M
3300022072\|Ga0196889_1098461	Not Available	534	Open in IMG/M
3300022178\|Ga0196887_1091164	Not Available	696	Open in IMG/M
(restricted) 3300024062\|Ga0255039_10323771	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED209	660	Open in IMG/M
(restricted) 3300024062\|Ga0255039_10371559	Not Available	616	Open in IMG/M
(restricted) 3300024264\|Ga0233444_10001010	Not Available	33457	Open in IMG/M
3300024326\|Ga0228652_1105491	Not Available	644	Open in IMG/M
(restricted) 3300024519\|Ga0255046_10318965	Not Available	728	Open in IMG/M
3300025026\|Ga0207879_101799	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED209	1503	Open in IMG/M
3300025057\|Ga0208018_100115	Not Available	29996	Open in IMG/M
3300025086\|Ga0208157_1001584	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	10095	Open in IMG/M
3300025086\|Ga0208157_1035095	Not Available	1424	Open in IMG/M
3300025102\|Ga0208666_1007482	All Organisms → Viruses → Predicted Viral	3956	Open in IMG/M
3300025103\|Ga0208013_1035863	Not Available	1397	Open in IMG/M
3300025108\|Ga0208793_1036941	Not Available	1583	Open in IMG/M
3300025127\|Ga0209348_1049741	Not Available	1419	Open in IMG/M
3300025132\|Ga0209232_1062043	Not Available	1336	Open in IMG/M
3300025168\|Ga0209337_1000558	Not Available	30180	Open in IMG/M
3300025652\|Ga0208134_1089173	Not Available	875	Open in IMG/M
3300025652\|Ga0208134_1147204	Not Available	597	Open in IMG/M
3300025671\|Ga0208898_1017918	All Organisms → Viruses → Predicted Viral	3233	Open in IMG/M
3300025759\|Ga0208899_1000640	Not Available	26159	Open in IMG/M
3300025810\|Ga0208543_1130339	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED209	592	Open in IMG/M
3300025887\|Ga0208544_10358244	Not Available	553	Open in IMG/M
3300027506\|Ga0208973_1004229	All Organisms → Viruses	5445	Open in IMG/M
3300027859\|Ga0209503_10000650	Not Available	19803	Open in IMG/M
(restricted) 3300028045\|Ga0233414_10425686	Not Available	620	Open in IMG/M
3300029309\|Ga0183683_1004634	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4396	Open in IMG/M
3300029309\|Ga0183683_1005227	Not Available	3992	Open in IMG/M
3300029309\|Ga0183683_1024234	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED209	1167	Open in IMG/M
3300029318\|Ga0185543_1018206	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1666	Open in IMG/M
3300031519\|Ga0307488_10024748	All Organisms → Viruses → Predicted Viral	4814	Open in IMG/M
3300031774\|Ga0315331_10033373	Not Available	3816	Open in IMG/M
3300032254\|Ga0316208_1050056	Not Available	1257	Open in IMG/M
3300032274\|Ga0316203_1024464	Not Available	1771	Open in IMG/M
3300032274\|Ga0316203_1208489	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED209	538	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.19%
Freshwater	Environmental → Aquatic → Freshwater	0.81%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	28.46%
Oceanic	Environmental → Aquatic → Marine → Oceanic	24.39%
Strait	Environmental → Aquatic → Marine → Strait	18.70%
Unclassified	Environmental → Aquatic → Marine → Unclassified	11.38%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	6.50%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	4.06%
Pelagic	Environmental → Aquatic → Marine → Pelagic	3.25%
Inlet	Environmental → Aquatic → Marine → Inlet	1.63%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.81%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	23.58%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	23.58%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	18.70%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	11.38%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	4.88%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	4.06%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	4.06%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	3.25%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	1.63%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.63%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.81%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.81%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.81%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.81%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	23.58%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	18.70%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	14.63%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	9.76%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	4.88%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	4.06%
Microbial Mat	Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat	2.44%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	2.44%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	2.44%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	1.63%
Marine	Environmental → Aquatic → Marine → Coastal → Sediment → Marine	1.63%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.63%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	1.63%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	1.63%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.81%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.81%
Marine	Environmental → Aquatic → Marine → Coastal → Sediment → Marine	0.81%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.81%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.81%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.81%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine Estuarine	0.81%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.81%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.81%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.81%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2236876001	Marine microbial communities from Columbia River, CM, sample from CR-7km from mouth, GS312-0p1-CR7-chlmax	Environmental	Open in IMG/M
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001472	Marine viral communities from the Pacific Ocean - LP-32	Environmental	Open in IMG/M
3300001589	Marine viral communities from the Pacific Ocean - LP-40	Environmental	Open in IMG/M
3300001965	Marine microbial communities from Coastal Floreana, Equador - GS028	Environmental	Open in IMG/M
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental	Open in IMG/M
3300005738	Seawater microbial communities from Vineyard Sound, MA, USA - sterilised with crude oil T0	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300006467	Coastal sediment microbial communities from Rhode Island, USA: Combined Assembly of Gp0121717, Gp0123912, Gp0123935	Environmental	Open in IMG/M
3300006622	Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ08 time point	Environmental	Open in IMG/M
3300006734	Marine viral communities from the Gulf of Mexico - 31_GoM_OMZ_CsCl metaG	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006924	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG	Environmental	Open in IMG/M
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental	Open in IMG/M
3300009002	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.573	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental	Open in IMG/M
3300009550	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300010392	Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385	Environmental	Open in IMG/M
3300011128	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, 0.02	Environmental	Open in IMG/M
3300011261	Marine sediment microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_4, 0.02	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300017708	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG	Environmental	Open in IMG/M
3300017714	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15	Environmental	Open in IMG/M
3300017717	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25	Environmental	Open in IMG/M
3300017726	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24	Environmental	Open in IMG/M
3300017727	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20	Environmental	Open in IMG/M
3300017728	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24	Environmental	Open in IMG/M
3300017741	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19	Environmental	Open in IMG/M
3300017743	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017753	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26	Environmental	Open in IMG/M
3300017758	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30	Environmental	Open in IMG/M
3300017769	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)	Environmental	Open in IMG/M
3300017772	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300017782	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19	Environmental	Open in IMG/M
3300017783	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018642	Metatranscriptome of marine microbial communities from Baltic Sea - GS695_0p1	Environmental	Open in IMG/M
3300020166	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1	Environmental	Open in IMG/M
3300020182	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2	Environmental	Open in IMG/M
3300020258	Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556061-ERR598949)	Environmental	Open in IMG/M
3300020347	Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556109-ERR598994)	Environmental	Open in IMG/M
3300020442	Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300020474	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)	Environmental	Open in IMG/M
3300021085	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015	Environmental	Open in IMG/M
3300021185	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015	Environmental	Open in IMG/M
3300021335	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540	Environmental	Open in IMG/M
3300021373	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300022057	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)	Environmental	Open in IMG/M
3300022072	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)	Environmental	Open in IMG/M
3300022178	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)	Environmental	Open in IMG/M
3300024062 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_1	Environmental	Open in IMG/M
3300024264 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MG	Environmental	Open in IMG/M
3300024326	Seawater microbial communities from Monterey Bay, California, United States - 64D	Environmental	Open in IMG/M
3300024519 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_27	Environmental	Open in IMG/M
3300025026	Marine viral communities from the Pacific Ocean - LP-24 (SPAdes)	Environmental	Open in IMG/M
3300025057	Marine viral communities from the Gulf of Mexico - 31_GoM_OMZ_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025086	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)	Environmental	Open in IMG/M
3300025102	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025103	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)	Environmental	Open in IMG/M
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025652	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)	Environmental	Open in IMG/M
3300025671	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300025810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025887	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027506	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_66_BLW_10 (SPAdes)	Environmental	Open in IMG/M
3300027859	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028045 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_10_MG	Environmental	Open in IMG/M
3300029309	Marine viral communities collected during Tara Oceans survey from station TARA_100 - TARA_R100001440	Environmental	Open in IMG/M
3300029318	Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031774	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915	Environmental	Open in IMG/M
3300032254	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month chalcopyrite	Environmental	Open in IMG/M
3300032274	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month pyrrhotite 1	Environmental	Open in IMG/M

Geographical Distribution

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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070124

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
none_3404481	2236876001	Marine Estuarine	VNGKNQTNLEDLIKKMENLPVPERTCNIDDETCESCSG
DelMOSum2010_100071338	3300000101	Marine	MEKNQTNLEDLIKRMENLPVPERTCNIDDETCESCSG*
DelMOSum2010_100120925	3300000101	Marine	MEKNQTNLEDLIKRMENLPVPERTCNIDDDTCESCSG*
DelMOSpr2010_100307722	3300000116	Marine	MEKKQTDLEDLIKRMESLPVPERTCNIDDETCESCSG*
DelMOSpr2010_100580753	3300000116	Marine	MEKNNQTNLEDLIKRMENLPVPERTCNIDDETCESCSG*
DelMOWin2010_100227095	3300000117	Marine	MEKNNQTNLEELIKKLEKVPVPERTCNIDDETCESCSG*
JGI24006J15134_1000063026	3300001450	Marine	MEKNNQTNLEDLIKKLENLPVPERTCNIENETCESCSG*
JGI24003J15210_100011275	3300001460	Marine	MNKQTNLEELIKKMEKLPVPERTCNIDDETCESCSG*
JGI24004J15324_100312535	3300001472	Marine	MEKNQTNLEDLIKKMENLPVPERTCNIDDESCESCSG*
JGI24005J15628_101407021	3300001589	Marine	MEKNNQTNLEDLIKRMENLPVPERTCNIDDDTCESC
GOS2243_10762612	3300001965	Marine	MDNKQTNLEELIKKMEKLPVPERTCNIEDENCESCSG*
KVRMV2_1009864512	3300002231	Marine Sediment	MEKNNQTNLQELIKKLENVPVPERTCNIDDETCESCSG*
Ga0076926_1194352	3300005738	Marine	MEKNQTNLEDLIKKMENLPVPERTCNIDDETCESCSG*
Ga0078893_106541112	3300005837	Marine Surface Water	MEKNNQTNLEDLIKKMENLPVPERTCNIDDETCESC
Ga0078893_109598333	3300005837	Marine Surface Water	MEKNNQTNLEELIKKLENVPVPERTCNIDDETCESCSG*
Ga0099972_130076582	3300006467	Marine	MEKNQTNLEDLIKRMENLPVPERTCNIENETCESCSG*
Ga0101442_1276412	3300006622	Marine Surface Water	MEKNNQTNLEDLIKRMENVPVPERTCNIDDETCESCSG*
Ga0098073_100050511	3300006734	Marine	MEKNNQTNLEDLIKKLEKLPVPERTCNIDDETCESCSG*
Ga0098038_10140803	3300006735	Marine	MEKNNQTNLEELIKKLEKVPVPERTCNIEDETCESCSG*
Ga0098038_12920782	3300006735	Marine	MDNRQTNLEDLIKKMEKLPVPERTYNIDDENCESCSG*
Ga0098037_10033252	3300006737	Marine	MDNRQTNLEDLIKKMEKLPVPERTCNIDDENFESCSG*
Ga0098048_10119433	3300006752	Marine	MEKNQTNLEDLIKRMENVPVPERTCNIEDESCESCSG*
Ga0098048_10261593	3300006752	Marine	MEKNNQTNLEDLIKKMENLPVPERTCNIDDETCESCSG*
Ga0098054_10482574	3300006789	Marine	MEKNQTNLEDLIKRMEKVPVPERTCNIEDESCESCSG*
Ga0098055_10251433	3300006793	Marine	MEKNNQTNLEDLIKRMENVPVPQRTCNIDDETCESCSG*
Ga0070749_1000035335	3300006802	Aqueous	MDNKQTNLEDLIKKMEKLPVPERTCNIEDENCESCSG*
Ga0070749_100128283	3300006802	Aqueous	MEKNQTNLEDLIKRMENVPVPERTCNIDDETCESCSG*
Ga0070754_101130162	3300006810	Aqueous	MGKQTNLEELIKKMEKLPVPERTCNIDDDNCESCSG*
Ga0070750_100039949	3300006916	Aqueous	MEKNNQTNLEELIKKLENIPVPERTCNIDDETCESCSG*
Ga0070750_101112952	3300006916	Aqueous	MEKNQTNLEDLIKRMENVPVPERTCNIDDETCESCSR*
Ga0098051_10889643	3300006924	Marine	MENNQTNLEGLIKKMENLPVPERTCNIDDETCESCSG*
Ga0070747_10193227	3300007276	Aqueous	MNKQTDLEELIKKMEKLPVPERTCNIEDETCESCSG*
Ga0070747_11643142	3300007276	Aqueous	MEKNQTNLEDLIKRMEKVPVPERTCNIDDETCESCSG*
Ga0070745_11206793	3300007344	Aqueous	EKNNQTNLEDLIKRMENLPVPERTCNIDDETCESCSG*
Ga0099847_12422582	3300007540	Aqueous	MEKNNQTNLEELIKKLENLPVPERTCNIDDETCESCSG*
Ga0102810_12333881	3300009002	Estuarine	MEKNQTNLEDLIKRMENLPVPERTCNIDDESCESCSG*
Ga0115564_102757262	3300009505	Pelagic Marine	MEKNQTNLEDLIKKMENLPVPERTCNIDDEICESCSG*
Ga0115572_101664592	3300009507	Pelagic Marine	MEKNNQTNLEDLIKKLENLPVPERTCNIEDETCESCSG*
Ga0115013_101912862	3300009550	Marine	MEKNNQTNLEELIKKLENIPVPERTCNIEDETCESCSG*
Ga0115012_1000346319	3300009790	Marine	MEKNQTNLEDLIKRLEKVPVPERTCNIDDNNCESCSG*
Ga0098049_11498922	3300010149	Marine	MEKNNQTNLEELIKRMENLPVPERTCSIDDETCESCSG*
Ga0098056_11380022	3300010150	Marine	MDNRQTNLEDLIKKMEKLPVSERTCNIDDENCESCSG*
Ga0118731_1132464832	3300010392	Marine	MEKNNQTNLEELIKKLENLPVPERTCNIDDETCESC
Ga0151669_1226381	3300011128	Marine	MEKNQTNLEDLIKRMENFPVPERTCNIDDETCESCCG*
Ga0151661_10357413	3300011261	Marine	MEKNQTNLEDLIKRMEKVPVPERTCNIDDESCESCWG*
Ga0160423_108839821	3300012920	Surface Seawater	MEKNNQTNLEDLIKKMENLPVPERTCNIDDDTCESCSG*
Ga0181369_11137072	3300017708	Marine	MEKNNQTNLEDLIKKMENLPVPELTCNIDDETCESC
Ga0181412_10481171	3300017714	Seawater	MEKNNQTNLEDLIKKLENLPVPERTCNIDDETCESCSG
Ga0181412_11290671	3300017714	Seawater	KMNKQTNLEDLIKKMEKLPVPERTCNIDDENCESCSG
Ga0181404_10735982	3300017717	Seawater	MEKKNQTNLEDLIKKMENLPVPERTCNIDDETCESCSGXKS
Ga0181381_100004914	3300017726	Seawater	MKNKQTDLEELIKSLENIPVPERTCDIEDENCESCSG
Ga0181381_10519902	3300017726	Seawater	MEKNQTNLEDLIKKMENLPVPERTCNIDDETCESCSGXKS
Ga0181401_10739123	3300017727	Seawater	MEKNNQTNLEDLIKRMENLPVPERTCNIDDETCESCSGXSN
Ga0181419_10006794	3300017728	Seawater	MDNRQTNLEDLIKKMEKLPVPERTCNIDDENCESCSG
Ga0181419_10885933	3300017728	Seawater	MEKNQTNLEDLIKKMEKVPVPERTCNIEDESCESCSG
Ga0181421_10898101	3300017741	Seawater	MEKNQTNLEDLIKRMENLPVPERTCNIDDETCESCSGXSN
Ga0181402_10066825	3300017743	Seawater	MEKNQTNLEDLIKKMESLPVPERTCNIDDDTCESCSG
Ga0181402_10404423	3300017743	Seawater	MNKQTNLEDLIKKMEKLPVPERTCNIDDENCESCSG
Ga0181392_10151856	3300017749	Seawater	MEKNNQTNLEDLIKKLENLPVPERTCNIEDETCESCSG
Ga0181392_11529762	3300017749	Seawater	MEKNQTNLEDLIRKMENLPVPERTCNIDDETCESCSG
Ga0181407_10031745	3300017753	Seawater	MEKNNQTNLEELIKKLEKVPVPERTCNIDDETCESCSG
Ga0181409_100493710	3300017758	Seawater	MEKNQTNLEDLIKKMENLPVPERTCNIDNETCESCSG
Ga0187221_12291822	3300017769	Seawater	MEKNQTNLEELIKKLEKVPVPERTCNIEDETCESCSGXK
Ga0181430_11780331	3300017772	Seawater	QKKQMEKNNQTNLEELIKKLEKVPVPERTCNIDDETCESCSG
Ga0181423_10051078	3300017781	Seawater	MEKNQTNLEDLIKRMENLPVPERTCNIEDENCESCSG
Ga0181380_11234492	3300017782	Seawater	MEKNQTNLEDLIKKMENLPVPERTCNIDDESCESCSGXIN
Ga0181379_10960382	3300017783	Seawater	MEKNNQTNLEDLIKKMENLPVPERTCNIDDDTCESCSG
Ga0181553_106477862	3300018416	Salt Marsh	MEKNNQTNLEDLIKKMENLPVPERTCNINDETCESCSGXTN
Ga0188867_10079842	3300018642	Freshwater Lake	MEKNQTNLEDLIKKMENLPVPERTCNIDDETCESSSXXX
Ga0206128_100112225	3300020166	Seawater	MEKNNQTNLEDLIKRMENLPVPERTCNIDDETCESCSG
Ga0206129_100889413	3300020182	Seawater	MEKNQTNLEDLIKKMENLPVPERTCNIDDETCESCSG
Ga0211529_10008187	3300020258	Marine	MEKNNQTNLEELIKKLENVPVPERTCNIDDETCESCSG
Ga0211504_10997972	3300020347	Marine	MEKNQTNLEDLIKKMENLPVPERTCNIDDETCESCSGXIN
Ga0211504_11128272	3300020347	Marine	MNKQTNLEDLIKKMEKLPVPERTCDIDDENCESCSG
Ga0211504_11236212	3300020347	Marine	MNKQTNLEELIKKMEKLPVPERTCNIDDETCESCSG
Ga0211559_100162088	3300020442	Marine	MEKNNQTDLEDLIKKLEKLPVPERTCNIDDESCESCSG
Ga0211577_100176715	3300020469	Marine	MEKNQTNLEDLIKRMENLPVPERTCNIDDENCESCSG
Ga0211577_105665402	3300020469	Marine	MDNKQTNLEDLIKKMEKLPVPERTCNIEDDNCESCSG
Ga0211547_100265013	3300020474	Marine	MEKNNQTNLEELIKKLENVPVPERTCNIENETCESCSG
Ga0206677_1000071813	3300021085	Seawater	MEKNQTNLEDLIKRMENVPVPERTCNIEDESCESCSG
Ga0206682_102763192	3300021185	Seawater	MEKNQTDLEDLIKRLEKIPTPERTCNIEDETCESCSG
Ga0213867_10202212	3300021335	Seawater	MEKNQTNLEDLIKRMENLPVPERTCNIDDDTCESCSG
Ga0213865_100247521	3300021373	Seawater	ILNMDNKQTNLEELIKKMEKLPVPERTCNIDDDNCESCSG
Ga0213865_100248503	3300021373	Seawater	MNKQTDLEELIKKMEKLPVPERTCNIEDETCESCSG
Ga0213865_100280123	3300021373	Seawater	MEKNNQTNLEDLIKRMENVPVPERTCNIDDETCESCSG
Ga0213865_100474392	3300021373	Seawater	MEKNNQTNLEDLIKKMENLPVPERTCNIDDETCESCSG
Ga0222717_1000070924	3300021957	Estuarine Water	MEKNQTNLEDLIKRMENVPVPERTCNIDDETCESCSG
Ga0212025_10605571	3300022057	Aqueous	MGKQTNLEELIKKMEKLPVPERTCNIDDDNCESCSG
Ga0196889_10984611	3300022072	Aqueous	MEKNQTNLEDLIKRMENLPVPERTCNIDDETCESCSG
Ga0196887_10911642	3300022178	Aqueous	MEKNQTNLEDLIKRMENLPVPERTCNIDDETCESCSGXIN
(restricted) Ga0255039_103237712	3300024062	Seawater	MEKNNQTNLEDLIKKLENLPVPERTCNIEDETCESCSGXKK
(restricted) Ga0255039_103715592	3300024062	Seawater	MEKNQTNLEDLIKRMENLPVPERTCNIEDETCESCSG
(restricted) Ga0233444_1000101038	3300024264	Seawater	MEKNQTDLEDLIKRLEKVPVPERTCNIEDENCESCSG
Ga0228652_11054912	3300024326	Seawater	MEKNQTNLEDLIKKMENLPVPERTCNIDDETCESCSGXNN
(restricted) Ga0255046_103189653	3300024519	Seawater	KNQTNLEDLIKRMENVPVPERTCNIDDETCESCSG
Ga0207879_1017992	3300025026	Marine	MEKNQTNLEDLIKKMENLPVPERTCNIDDESCESCSG
Ga0208018_10011521	3300025057	Marine	MEKNNQTNLEDLIKKLEKLPVPERTCNIDDETCESCSG
Ga0208157_10015844	3300025086	Marine	MDNRQTNLEDLIKKMEKLPVPERTCNIDDENFESCSG
Ga0208157_10350953	3300025086	Marine	MEKNNQTNLEELIKKLEKVPVPERTCNIEDETCESCSG
Ga0208666_10074822	3300025102	Marine	MDNRQTNLEDLIKKMEKLPVPERTYNIDDENCESCSG
Ga0208013_10358633	3300025103	Marine	MEKNQTNLEDLIKRMENVPVPQRTCNIDDETCESCSG
Ga0208793_10369414	3300025108	Marine	MEKNNQTNLEDLIKRMENVPVPQRTCKIDDETCESCSG
Ga0209348_10497413	3300025127	Marine	MEKNNQTNLQDLIKRMENLPVPERTCNIDDETCESCSG
Ga0209232_10620433	3300025132	Marine	MEKNQTNLEDLIKKMESLPVPERTCNIDDETCESCSG
Ga0209337_100055843	3300025168	Marine	MEKNNQTNLEDLIKKLENLPVPERTCNIENETCESCSG
Ga0208134_10891732	3300025652	Aqueous	MEKNQTNLEDLIKRMENLPVPERTCNIDDETCESCSGXRS
Ga0208134_11472042	3300025652	Aqueous	MEKNNQTNLEDLIKRMENLPVPERTCNIDDETCESCSGXIN
Ga0208898_10179182	3300025671	Aqueous	MDNKQTNLEDLIKKMEKLPVPERTCNIEDENCESCSG
Ga0208899_100064010	3300025759	Aqueous	MEKNNQTNLEELIKKLENIPVPERTCNIDDETCESCSG
Ga0208543_11303392	3300025810	Aqueous	MEKNNQTNLEELIKKLENIPVPERTCNIDDETCESCSGXKK
Ga0208544_103582441	3300025887	Aqueous	MEKNQTNLEDLIKRMENLPVPERTCNIDDETCESCSGXNN
Ga0208973_100422914	3300027506	Marine	MEKNQTNLEDLIKRMQNVPVPERTCNIDDETCESCSG
Ga0209503_1000065016	3300027859	Marine	MEKNNQTNLQELIKKLENIPVPERTCNIEDETCESCSG
(restricted) Ga0233414_104256862	3300028045	Seawater	MEKNQTNLEDLIKRMENLPVPERTCNIDDDTCESCSGXIN
Ga0183683_10046342	3300029309	Marine	MEKNNQTNLEQLIKKLENVPVPERTCNIEDESCESCSG
Ga0183683_10052278	3300029309	Marine	MEKNNQTNLEELIKKLEKVPVPERTCNIEDESCESCSG
Ga0183683_10242343	3300029309	Marine	MKNKQTDLEELIKSLENIPVPERTCDIENENCESCSG
Ga0185543_10182063	3300029318	Marine	MEKNNQTNLEELIKKLENVPVPERTCNIEDETCESCSG
Ga0307488_100247482	3300031519	Sackhole Brine	MEKKQTDLEDLIKRMENLPVPERTCNIDDETCESCSG
Ga0315331_100333738	3300031774	Seawater	MKKNNQTNLEDLIKKLENVPVPERTCNIDDETCESCSG
Ga0316208_10500563	3300032254	Microbial Mat	MKKNQTNLEDLIKRMENVPVPERTCNIDDETCESCSG
Ga0316203_10244643	3300032274	Microbial Mat	MEKNQTNLEDLIKRMEKVPVPERTCNIDDETCESCSG
Ga0316203_12084892	3300032274	Microbial Mat	MEKNQTNLEDLIKKMENLPVPERTCNIDDETCESCSGXRS

Hidden Markov Model


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