Metagenome / Metatranscriptome Family F070111

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070111
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	79 residues
Representative Sequence	MTKISVELDNEQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSVDQLIKWFGTPEQVKQVFGNED
Number of Associated Samples	91
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	82.11 %
% of genes near scaffold ends (potentially truncated)	15.45 %
% of genes from short scaffolds (< 2000 bps)	65.85 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (42.276 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (36.585 % of family members)
Environment Ontology (ENVO)	Unclassified (39.837 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (47.967 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.23% β-sheet: 6.33% Coil/Unstructured: 35.44%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF13640	2OG-FeII_Oxy_3	8.13
PF02801	Ketoacyl-synt_C	5.69
PF12487	DUF3703	4.88
PF04055	Radical_SAM	2.44
PF13353	Fer4_12	2.44
PF00383	dCMP_cyt_deam_1	2.44
PF00004	AAA	1.63
PF03567	Sulfotransfer_2	1.63
PF01755	Glyco_transf_25	0.81
PF00501	AMP-binding	0.81
PF00881	Nitroreductase	0.81
PF10902	WYL_2	0.81
PF00268	Ribonuc_red_sm	0.81
PF02675	AdoMet_dc	0.81
PF05019	Coq4	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0208	Ribonucleotide reductase beta subunit, ferritin-like domain	Nucleotide transport and metabolism [F]	0.81
COG1586	S-adenosylmethionine decarboxylase	Amino acid transport and metabolism [E]	0.81
COG3306	Glycosyltransferase involved in LPS biosynthesis, GR25 family	Cell wall/membrane/envelope biogenesis [M]	0.81
COG5031	Ubiquinone biosynthesis protein Coq4	Coenzyme transport and metabolism [H]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.72 %
Unclassified	root	N/A	42.28 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	50.41 %
Unclassified	root	N/A	42.28 %
cellular organisms	root	All Organisms → cellular organisms	7.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.28 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	39.02 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	11.38 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	7.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.28 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	39.02 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	11.38 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	4.07 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.28 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	39.02 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	11.38 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	4.07 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.28 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	39.02 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	11.38 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4.07 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	3.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.28 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	39.02 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	8.94 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	3.25 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	2.44 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.28 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	39.02 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8.94 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	3.25 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	2.44 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.28 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	39.02 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8.94 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	3.25 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	2.44 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.28 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	39.02 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8.94 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	3.25 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	2.44 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352004\|2199908451	All Organisms → Viruses → Predicted Viral	2852	Open in IMG/M
2199352004\|2199913691	Not Available	10500	Open in IMG/M
3300001266\|B570J13884_100033	Not Available	16785	Open in IMG/M
3300001266\|B570J13884_100890	All Organisms → Viruses → Predicted Viral	2341	Open in IMG/M
3300001274\|B570J13895_1000229	Not Available	11060	Open in IMG/M
3300002835\|B570J40625_100761910	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	857	Open in IMG/M
3300003395\|JGI25917J50250_1072996	Not Available	717	Open in IMG/M
3300003429\|JGI25914J50564_10088361	Not Available	779	Open in IMG/M
3300004096\|Ga0066177_10578368	Not Available	502	Open in IMG/M
3300004793\|Ga0007760_11452153	All Organisms → Viruses → Predicted Viral	1871	Open in IMG/M
3300005517\|Ga0070374_10003178	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7429	Open in IMG/M
3300005941\|Ga0070743_10120232	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	879	Open in IMG/M
3300006484\|Ga0070744_10018068	All Organisms → Viruses → Predicted Viral	2092	Open in IMG/M
3300006484\|Ga0070744_10018170	All Organisms → Viruses → Predicted Viral	2088	Open in IMG/M
3300006484\|Ga0070744_10025615	All Organisms → Viruses → Predicted Viral	1747	Open in IMG/M
3300006484\|Ga0070744_10078961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	954	Open in IMG/M
3300007545\|Ga0102873_1260854	Not Available	520	Open in IMG/M
3300007546\|Ga0102874_1144011	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	743	Open in IMG/M
3300007546\|Ga0102874_1223820	Not Available	573	Open in IMG/M
3300007546\|Ga0102874_1243491	Not Available	545	Open in IMG/M
3300007549\|Ga0102879_1085823	Not Available	985	Open in IMG/M
3300007559\|Ga0102828_1013909	All Organisms → Viruses → Predicted Viral	1683	Open in IMG/M
3300007559\|Ga0102828_1088673	Not Available	746	Open in IMG/M
3300007559\|Ga0102828_1110865	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	672	Open in IMG/M
3300007562\|Ga0102915_1156120	Not Available	744	Open in IMG/M
3300007603\|Ga0102921_1317250	Not Available	555	Open in IMG/M
3300007618\|Ga0102896_1175242	Not Available	680	Open in IMG/M
3300007620\|Ga0102871_1162981	Not Available	627	Open in IMG/M
3300007621\|Ga0102872_1057313	All Organisms → Viruses → Predicted Viral	1060	Open in IMG/M
3300007629\|Ga0102895_1116823	Not Available	690	Open in IMG/M
3300007630\|Ga0102903_1066066	Not Available	1007	Open in IMG/M
3300007632\|Ga0102894_1048159	All Organisms → Viruses → Predicted Viral	1110	Open in IMG/M
3300007634\|Ga0102901_1042353	All Organisms → Viruses → Predicted Viral	1321	Open in IMG/M
3300007644\|Ga0102902_1102911	Not Available	853	Open in IMG/M
3300007644\|Ga0102902_1175091	Not Available	635	Open in IMG/M
3300007653\|Ga0102868_1089850	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	696	Open in IMG/M
3300008113\|Ga0114346_1020268	All Organisms → Viruses → Predicted Viral	4540	Open in IMG/M
3300008113\|Ga0114346_1075476	All Organisms → Viruses → Predicted Viral	1604	Open in IMG/M
3300008950\|Ga0102891_1132205	Not Available	743	Open in IMG/M
3300008950\|Ga0102891_1148086	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	695	Open in IMG/M
3300008995\|Ga0102888_1132333	Not Available	520	Open in IMG/M
3300008999\|Ga0102816_1035271	All Organisms → Viruses → Predicted Viral	1469	Open in IMG/M
3300009026\|Ga0102829_1000184	Not Available	19768	Open in IMG/M
3300009026\|Ga0102829_1048920	All Organisms → Viruses → Predicted Viral	1266	Open in IMG/M
3300009079\|Ga0102814_10053854	All Organisms → Viruses → Predicted Viral	2229	Open in IMG/M
3300009159\|Ga0114978_10037066	All Organisms → Viruses → Predicted Viral	3443	Open in IMG/M
3300009419\|Ga0114982_1002381	Not Available	8262	Open in IMG/M
3300010885\|Ga0133913_12402164	All Organisms → Viruses → Predicted Viral	1289	Open in IMG/M
3300011010\|Ga0139557_1045380	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	755	Open in IMG/M
3300011011\|Ga0139556_1005510	All Organisms → Viruses → Predicted Viral	1845	Open in IMG/M
3300012352\|Ga0157138_1037276	Not Available	769	Open in IMG/M
3300012667\|Ga0157208_10001640	All Organisms → Viruses → Predicted Viral	4835	Open in IMG/M
3300012667\|Ga0157208_10002205	All Organisms → Viruses → Predicted Viral	3882	Open in IMG/M
3300012774\|Ga0138283_1214807	Not Available	735	Open in IMG/M
3300017774\|Ga0181358_1047529	All Organisms → Viruses → Predicted Viral	1633	Open in IMG/M
3300017785\|Ga0181355_1013835	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3545	Open in IMG/M
3300019784\|Ga0181359_1000809	Not Available	7569	Open in IMG/M
3300019784\|Ga0181359_1023138	All Organisms → Viruses → Predicted Viral	2365	Open in IMG/M
3300020141\|Ga0211732_1173949	All Organisms → Viruses → Predicted Viral	2229	Open in IMG/M
3300020141\|Ga0211732_1504036	All Organisms → Viruses → Predicted Viral	4301	Open in IMG/M
3300020151\|Ga0211736_10267991	All Organisms → Viruses → Predicted Viral	1842	Open in IMG/M
3300020159\|Ga0211734_10425835	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	6701	Open in IMG/M
3300020160\|Ga0211733_11036024	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	801	Open in IMG/M
3300020205\|Ga0211731_10605493	All Organisms → Viruses → Predicted Viral	1331	Open in IMG/M
3300020534\|Ga0208596_1026020	Not Available	887	Open in IMG/M
3300020535\|Ga0208228_1028173	Not Available	919	Open in IMG/M
3300020560\|Ga0208852_1005775	All Organisms → Viruses → Predicted Viral	2773	Open in IMG/M
3300020563\|Ga0208082_1018966	All Organisms → Viruses → Predicted Viral	1440	Open in IMG/M
3300020565\|Ga0208718_1021463	All Organisms → Viruses → Predicted Viral	1309	Open in IMG/M
3300020565\|Ga0208718_1063432	Not Available	684	Open in IMG/M
3300020575\|Ga0208053_1013504	All Organisms → Viruses → Predicted Viral	1648	Open in IMG/M
3300021961\|Ga0222714_10120357	All Organisms → Viruses → Predicted Viral	1622	Open in IMG/M
3300021962\|Ga0222713_10030665	All Organisms → Viruses → Predicted Viral	4339	Open in IMG/M
3300024343\|Ga0244777_10001249	Not Available	18462	Open in IMG/M
3300024343\|Ga0244777_10777399	Not Available	567	Open in IMG/M
3300024346\|Ga0244775_10002339	Not Available	20812	Open in IMG/M
3300024346\|Ga0244775_10065947	All Organisms → Viruses → Predicted Viral	3113	Open in IMG/M
3300024346\|Ga0244775_10114196	All Organisms → Viruses → Predicted Viral	2291	Open in IMG/M
3300024346\|Ga0244775_10218601	All Organisms → Viruses → Predicted Viral	1594	Open in IMG/M
3300024346\|Ga0244775_10232825	All Organisms → Viruses → Predicted Viral	1538	Open in IMG/M
3300024346\|Ga0244775_10306416	All Organisms → Viruses → Predicted Viral	1316	Open in IMG/M
3300024348\|Ga0244776_10066988	All Organisms → Viruses → Predicted Viral	2751	Open in IMG/M
3300024348\|Ga0244776_10081152	All Organisms → Viruses → Predicted Viral	2461	Open in IMG/M
3300027193\|Ga0208800_1001309	All Organisms → Viruses → Predicted Viral	3100	Open in IMG/M
3300027193\|Ga0208800_1039130	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	640	Open in IMG/M
3300027227\|Ga0208929_1058682	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	784	Open in IMG/M
3300027229\|Ga0208442_1037230	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	870	Open in IMG/M
3300027239\|Ga0208807_1020144	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1001	Open in IMG/M
3300027242\|Ga0208806_1078165	Not Available	613	Open in IMG/M
3300027246\|Ga0208931_1073469	Not Available	628	Open in IMG/M
3300027260\|Ga0208027_1088857	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	590	Open in IMG/M
3300027294\|Ga0208441_1083380	Not Available	655	Open in IMG/M
3300027305\|Ga0208168_1074785	Not Available	699	Open in IMG/M
3300027320\|Ga0208923_1000340	Not Available	10632	Open in IMG/M
3300027320\|Ga0208923_1061530	Not Available	666	Open in IMG/M
3300027366\|Ga0208556_1026063	All Organisms → Viruses → Predicted Viral	1204	Open in IMG/M
3300027468\|Ga0209247_1067870	Not Available	528	Open in IMG/M
3300027563\|Ga0209552_1019169	All Organisms → Viruses → Predicted Viral	2057	Open in IMG/M
3300027631\|Ga0208133_1113674	Not Available	630	Open in IMG/M
3300027710\|Ga0209599_10000125	Not Available	54412	Open in IMG/M
3300027753\|Ga0208305_10073362	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1301	Open in IMG/M
3300027756\|Ga0209444_10000941	Not Available	16069	Open in IMG/M
3300027759\|Ga0209296_1000034	Not Available	122200	Open in IMG/M
3300027808\|Ga0209354_10245625	Not Available	719	Open in IMG/M
3300027836\|Ga0209230_10017486	All Organisms → Viruses → Predicted Viral	3385	Open in IMG/M
3300027892\|Ga0209550_10480754	Not Available	750	Open in IMG/M
3300027892\|Ga0209550_10531554	Not Available	701	Open in IMG/M
3300031758\|Ga0315907_10090876	All Organisms → Viruses → Predicted Viral	2625	Open in IMG/M
3300031951\|Ga0315904_11384808	Not Available	526	Open in IMG/M
3300032092\|Ga0315905_10119050	All Organisms → Viruses → Predicted Viral	2652	Open in IMG/M
3300032092\|Ga0315905_10164055	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2207	Open in IMG/M
3300032092\|Ga0315905_10707441	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	892	Open in IMG/M
3300034013\|Ga0334991_0003430	Not Available	12307	Open in IMG/M
3300034013\|Ga0334991_0004610	Not Available	10118	Open in IMG/M
3300034022\|Ga0335005_0306077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	943	Open in IMG/M
3300034060\|Ga0334983_0031226	All Organisms → Viruses → Predicted Viral	3505	Open in IMG/M
3300034060\|Ga0334983_0368685	Not Available	837	Open in IMG/M
3300034066\|Ga0335019_0383460	Not Available	863	Open in IMG/M
3300034102\|Ga0335029_0203742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1312	Open in IMG/M
3300034102\|Ga0335029_0240796	All Organisms → Viruses → Predicted Viral	1175	Open in IMG/M
3300034110\|Ga0335055_0088727	All Organisms → Viruses → Predicted Viral	1417	Open in IMG/M
3300034117\|Ga0335033_0481571	Not Available	597	Open in IMG/M
3300034168\|Ga0335061_0289292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	858	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.37%
Terrestrial	Environmental → Terrestrial	1.63%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	50.41%
Marine	Environmental → Aquatic → Marine	47.97%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.63%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	36.59%
Lentic	Environmental → Aquatic → Freshwater → Lentic	23.58%
Lake	Environmental → Aquatic → Freshwater → Lake	19.51%
Unclassified	Environmental → Aquatic → Marine → Unclassified	11.38%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	4.06%
Lotic	Environmental → Aquatic → Freshwater → Lotic	2.44%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.63%
Ice	Environmental → Aquatic → Freshwater → Ice	0.81%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	36.59%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	19.51%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	13.01%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	11.38%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	10.57%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	4.06%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	2.44%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.63%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	36.59%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	12.20%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	10.57%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	9.76%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	8.94%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.69%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	4.06%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	3.25%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	2.44%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.63%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.63%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.63%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.81%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352004	Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnion	Environmental	Open in IMG/M
3300001266	Freshwater microbial communities from Lake Mendota, WI - 05MAY2010 deep hole epilimnion	Environmental	Open in IMG/M
3300001274	Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnion	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003395	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SN	Environmental	Open in IMG/M
3300003429	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN	Environmental	Open in IMG/M
3300004096	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2)	Environmental	Open in IMG/M
3300004793	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300007545	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-3	Environmental	Open in IMG/M
3300007546	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02	Environmental	Open in IMG/M
3300007549	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-02	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007562	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-02	Environmental	Open in IMG/M
3300007603	Estuarine microbial communities from the Columbia River estuary - metaG 1568-02	Environmental	Open in IMG/M
3300007618	Estuarine microbial communities from the Columbia River estuary - metaG 1554A-02	Environmental	Open in IMG/M
3300007620	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-02	Environmental	Open in IMG/M
3300007621	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-3	Environmental	Open in IMG/M
3300007629	Estuarine microbial communities from the Columbia River estuary - metaG 1554B-3	Environmental	Open in IMG/M
3300007630	Estuarine microbial communities from the Columbia River estuary - metaG 1555C-02	Environmental	Open in IMG/M
3300007632	Estuarine microbial communities from the Columbia River estuary - metaG 1554A-3	Environmental	Open in IMG/M
3300007634	Estuarine microbial communities from the Columbia River estuary - metaG 1555A-02	Environmental	Open in IMG/M
3300007644	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-02	Environmental	Open in IMG/M
3300007653	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-3	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008950	Estuarine microbial communities from the Columbia River estuary - metaG 1552A-02	Environmental	Open in IMG/M
3300008995	Estuarine microbial communities from the Columbia River estuary - metaG 1551A-3	Environmental	Open in IMG/M
3300008999	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009079	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011010	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface Ice	Environmental	Open in IMG/M
3300011011	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Top - Depth 1m	Environmental	Open in IMG/M
3300012352	Freshwater microbial communities from Baxter Creek, Ontario, Canada - S37	Environmental	Open in IMG/M
3300012667	Freshwater microbial communities from Maskinonge River, Ontario, Canada - S15	Environmental	Open in IMG/M
3300012774	Freshwater microbial communities from Lake Simoncouche, Canada - S_130109_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300020534	Freshwater microbial communities from Lake Mendota, WI - 12JUL2011 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020535	Freshwater microbial communities from Lake Mendota, WI - 25JUL2011 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020560	Freshwater microbial communities from Lake Mendota, WI - 18JUN2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300020563	Freshwater microbial communities from Lake Mendota, WI - 09JUN2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300020565	Freshwater microbial communities from Lake Mendota, WI - 29APR2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300020575	Freshwater microbial communities from Lake Mendota, WI - 20MAY2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300027193	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541 (SPAdes)	Environmental	Open in IMG/M
3300027227	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-02 (SPAdes)	Environmental	Open in IMG/M
3300027229	Estuarine microbial communities from the Columbia River estuary - metaG 1549B-3 (SPAdes)	Environmental	Open in IMG/M
3300027239	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-3 (SPAdes)	Environmental	Open in IMG/M
3300027242	Estuarine microbial communities from the Columbia River estuary - metaG 1554B-02 (SPAdes)	Environmental	Open in IMG/M
3300027246	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-02 (SPAdes)	Environmental	Open in IMG/M
3300027260	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-02 (SPAdes)	Environmental	Open in IMG/M
3300027294	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-02 (SPAdes)	Environmental	Open in IMG/M
3300027305	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02 (SPAdes)	Environmental	Open in IMG/M
3300027320	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 (SPAdes)	Environmental	Open in IMG/M
3300027366	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-3 (SPAdes)	Environmental	Open in IMG/M
3300027468	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DN (SPAdes)	Environmental	Open in IMG/M
3300027563	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027631	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027753	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741 (SPAdes)	Environmental	Open in IMG/M
3300027756	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300027836	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome (SPAdes)	Environmental	Open in IMG/M
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300034013	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Jun2018-rr0034	Environmental	Open in IMG/M
3300034022	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058	Environmental	Open in IMG/M
3300034060	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16May2013-rr0016	Environmental	Open in IMG/M
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034110	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Jun2009D10-rr0171	Environmental	Open in IMG/M
3300034117	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jun2014-rr0124	Environmental	Open in IMG/M
3300034168	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME06Apr2016-rr0183	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2200090292	2199352004	Freshwater	MTKISVELDIDQFDKLVVEELIRTRDAFLNDLGANNHVFVYGDSEADDIEIQKHIDSTDQLIKWFGTPEQVKRVFGDED
2200099459	2199352004	Freshwater	MTKISVELDIDQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSADQLIKWFGTPEQIEEVFGNEDG
B570J13884_10003318	3300001266	Freshwater	MTKISVELDIDQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSADQLIKWFGTPEQIEEVFGNEDG*
B570J13884_1008901	3300001266	Freshwater	MTKISVELDIDQFDKLVVEELIRTRDAFLNDLGANNHVFVYGDSEADDIEIQKHIDSTDQLIKWFGTPEQVKRVFGDED*
B570J13895_100022915	3300001274	Freshwater	MTKISVELDSEQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSADQLIKWFGTPEQIEEVFGNEDG*
B570J40625_1007619102	3300002835	Freshwater	MTKISVELDSEQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSVDQLINWFGTPEQIKEVYGNED*
JGI25917J50250_10729962	3300003395	Freshwater Lake	MHKVEVTLTTDQFDTMVVEELIRTRQTFLNDLGANNHVFVYGDQEADDIEIQKHIDSLDQLIKWFGTEKQIEEVYGNEG*
JGI25914J50564_100883612	3300003429	Freshwater Lake	MKMTKISVELDNEQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDTEIQKHIDSVDQLIKWFGTPEQIKEVYGNED*
Ga0066177_105783682	3300004096	Freshwater Lake	MTKISVELDIEQFDTMVVNELIRTREAFLNSLGANDHVFVWDDQEADDIEIQKRIDALELLLKWYATPKQLANIGITDD*
Ga0007760_114521533	3300004793	Freshwater Lake	MTKISVELDVDQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDTEIQKHIDSVDQLIKWFGTPEQVKQVFGNED*
Ga0070374_100031784	3300005517	Freshwater Lake	MTKISVELDNEQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDTEIQKHIDSVDQLIKWFGTPEQIKEVYGNED*
Ga0070743_101202322	3300005941	Estuarine	MTKITVELDIEQFDTMVVNELIRTREAFLNDIGANNHVFVWDDQEADDIEIQKRIDALELLLKWYATPKQLANIGITDDQG*
Ga0070744_100180683	3300006484	Estuarine	MKMTKISVELDNEQFDTMVVEELIKTRAGFLNDLGANNHVFVWGDQEADDAEIQKHIDSVDQLINWFGTPEQIKEVYGNED*
Ga0070744_100181703	3300006484	Estuarine	VTKISVELDSEQFDKVVVEELIRTRQTFLNDLGANNHVFVWGDQEADDIEIQKHIDAAELLLKWFSTKDQLAEMGITDD*
Ga0070744_100256154	3300006484	Estuarine	MTKISVELDVDQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSVDQLIKWFGTPEQIKKVYGNED*
Ga0070744_100789613	3300006484	Estuarine	MTKITVELDIEQFDTMVVNELIRTREAFLNDLGANNHVFVWDDQEADDIEIQKRIDALELLLKWYATPEQLANIGITDDQG*
Ga0102873_12608541	3300007545	Estuarine	NEQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSVEQLIKWFGTPEQVKQVFGNED*
Ga0102874_11440113	3300007546	Estuarine	MKMTKISVELDVDQFDKLVVEELIRTRAGFLNDLGANNHVFVYGDQEADDIEIQKHIDSLDDLIKWFGTPEQVKKVFGNED*
Ga0102874_12238201	3300007546	Estuarine	MKMTKISVELDNEQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSVDQLIKWFGTPEQVKQVFGNED*
Ga0102874_12434912	3300007546	Estuarine	MKMTKISVELDNEQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSVEQLIKWFGTPEQVKQVFGNED*
Ga0102879_10858233	3300007549	Estuarine	MTKISVELDNEQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSVEQLIKWFGTPEQVKQVFGNED*
Ga0102828_10139096	3300007559	Estuarine	KMTKISVELDSEQFDTMVVNELIRTREAFLNDIGANNHVFVWDDQEADDIEIQKRIDALELLLKWYATPKQLANIGITDDQG*
Ga0102828_10886733	3300007559	Estuarine	MTKISVELDVDQFDKLVVEELIRTRAGFLNDLGANNHVFVYGDQEADDAEIQKHIDSVDQLINWFGTPEQIKEVYGNED*
Ga0102828_11108652	3300007559	Estuarine	MKMTKISVELDNEQFDTMVVEELIKTRAGFLNDLGANNHVFVWGDQEADDAEIQKHIDSVDQLINWFGTPEQIKEVYGNE
Ga0102915_11561203	3300007562	Estuarine	MTKISVELDNEQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSVEQLIKWFGTPEQVKKVFGNED*
Ga0102921_13172502	3300007603	Estuarine	MTKISVELDIDQFDKLVVEELIRTREAFLNDLGANNHVFVYGDQEADDIEIQKHIDSLDDLIKWFGTPEQVKKVFGNED*
Ga0102896_11752422	3300007618	Estuarine	MKMTKISVELDNEQFDTMVVEELIKTRAGFLNDLGANNHVFVWGDQEADDAEIQKHIDSVDQLIKWFGTPEQIKKVYGNED*
Ga0102871_11629812	3300007620	Estuarine	MTKISVELDVDQFDKLVVEELIRTRAGFLNDLGANNHVFVYGDQEADDIEIQKHIDSLDTLIDWFATPEQLEEHGLTRISDIFPGIDLK*
Ga0102872_10573133	3300007621	Estuarine	MTKITVELDIEQFDTMVVNELIRTREAFLNDIGANNHVFVWDDQEADDIEIQKRIDALELLLKWYATPKQLANIGITDNQG*
Ga0102895_11168233	3300007629	Estuarine	MTKITVELDIEQFDTMVVNELIRTREAFLNDIGADNHVFVWDDQEADDIEIQKRIDALELLLKWYATPKQLANIGITDDQG*
Ga0102903_10660662	3300007630	Estuarine	MTKISVELDIDQFDKLVVEELIRTREAFLNDLGANNHVFVWGDQEADDAEIQKHIDSVEQLIKWFGTPEQVKQVFGNED*
Ga0102894_10481593	3300007632	Estuarine	MKMTKISVELDNEQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSVEQLIKWFGTPEQVKQVFSDED*
Ga0102901_10423533	3300007634	Estuarine	MTKISVELDNEQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSVDQLIKWFGTPEQVKQVFGNED*
Ga0102902_11029113	3300007644	Estuarine	MTKISVELDVDQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSVDQLINWFGTPEQIKEVYGNED*
Ga0102902_11750912	3300007644	Estuarine	MKMTKISVELDNEQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSVEQLIKWFGTPEQVKKVFGNED*
Ga0102868_10898501	3300007653	Estuarine	MKMTKISVELDVDQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSVDQLIKWFGTPEQVKQVFGNED*
Ga0114346_10202681	3300008113	Freshwater, Plankton	MKMTKISVELDVEQFDKLVVEELIRTRAGFLNDLGANNHVFVYGDQEADDIEIQKHIDSLDDLIKWFGTPEQVKKVFGDED*
Ga0114346_10754764	3300008113	Freshwater, Plankton	MTKISVELDIDQFDKLVVEELIRTRDAFLNDLGANNHVFVYGDSEADDIEIQKHIDSTDQLIRWFGTPEQVKRVFGDED*
Ga0102891_11322053	3300008950	Estuarine	MTKISVELDVDQFDKLVVEELIKTREAFLNDLGANNHVFVYGDQEADDIEIQKHIDSLDDLIKWFGTPEQVKKVFGNED*
Ga0102891_11480863	3300008950	Estuarine	EQFDKLVVEELIRTRQTFLNDLGAKNHVFVWGDQEADDAEIQKHIDSVDQLIKWFGTPEQVKQVFGNED*
Ga0102888_11323331	3300008995	Estuarine	FDTMVVNELIRTREAFLNDIGANNYVFVWDDQEADDIEIQKRIDALELLLKWYATPKQLANIGITDDQG*
Ga0102816_10352711	3300008999	Estuarine	MTKITVELDIEQFDTMVVNELIRTREAFLNRLGANDHVFVWDDQEADDIEIQKRIDALELLLKWYATPKQLANIGITDDQG*
Ga0102829_100018412	3300009026	Estuarine	VTKISVELDSEQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDIEIQKHIDAAELLLKWFSTKDQLAEMGITDD*
Ga0102829_10489203	3300009026	Estuarine	MTKISVELDSEQFDTMVVNELIRTREAFLNRLGANDHVFVWDDQEADDIEIQKRIDALELLLKWYATPKQLANIGITDD*
Ga0102814_100538544	3300009079	Estuarine	MSKITVELDIEQFDTMVVNELIRTREAFLNDIGANNHVFVWDDQEADDIEIQKRIDALELLLKWYATPKQLANIGITDDQG*
Ga0114978_100370669	3300009159	Freshwater Lake	MHKVEVTLTTDQFDTMVVEELIRTRQTFLNDLGANNHVFVWGDQEADDIEIQKHIDSLDTLINWFATPEQLEECGLSRISDIFPGIDLK*
Ga0114982_10023816	3300009419	Deep Subsurface	MTKISVELDVEQFDKLVVEELIRTREAFLNDLGANNHVFVYGDQEADDIEIQKHIDSLDDLIKWFGTPEQVKKVFGDED*
Ga0133913_124021644	3300010885	Freshwater Lake	MKMTKISVELDNEQFDKLVVEELIRTRAGFLNDLGANNHVFVYGDQEADDIEIQKHIDSLDKLINWFATPEQLEDHGLYRISDIFPGIDLK*
Ga0139557_10453803	3300011010	Freshwater	MKMHKVEVTLTTDQFDTMVVEELIRTRQTFLNDLGANNHVFVWGDQEADDIEIQKHIDSLDTVINWFGTEKQIEEVYGNEG*
Ga0139556_10055102	3300011011	Freshwater	MKMSKISVELDNEQFDKLVVEELIRTRQKFLNDLGANNHVFVWGDQEADDAEIQKHIDSVDQLINWFGTPEQIKKVYGNED*
Ga0157138_10372761	3300012352	Freshwater	MKMTKISVELDIDQFDKLVVEELIRTRAQFLNDLGANANIFVWGDQEADDAEIQKHIDSLDDLIKWFGTPEQVKQVFGNED*
Ga0157208_100016402	3300012667	Freshwater	MKMSKVTVELDIDQFDKLVVEELIRTRDAFLNDLGANNHVFVYGDSEADDIEIQKHIDSTDQLIKWFGTPEQVKRVFGDED*
Ga0157208_100022059	3300012667	Freshwater	MTKISVELDIDQFDKLVVEELIRTRAQFLNDLGANANIFVWGDQEADDAEIQKHIDSLDDLIKWFGTPEQVKQVFGNED*
Ga0138283_12148071	3300012774	Freshwater Lake	MKMHKVEVTLTTDQFDTMVVEELIRTRQTFLNDLGANNHVFVWGDQEADDIEIQKHIDSLDTLINWFATPEQLEECGLSRISDIFPGIDLK*
Ga0181358_10475292	3300017774	Freshwater Lake	MTKISVELDNEQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDTEIQKHIDSVDQLIKWFGTPEQVKQVFGNED
Ga0181355_10138352	3300017785	Freshwater Lake	MTKISVELDVDQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDTEIQKHIDSVDQLIKWFGTPEQVKQVFGNED
Ga0181359_100080914	3300019784	Freshwater Lake	MHKVEVTLTTDQFDTMVVEELIRTRQTFLNDLGANNHVFVYGDQEADDIEIQKHIDSLDQLIKWFGTEKQIEEVYGNEG
Ga0181359_10231382	3300019784	Freshwater Lake	MTKISVELDVDQFDKLVVEELIRTRQKFLNDLGANNHVFVWGDQEADDTEIQKHIDSVDQLIKWFGTPEQIKKVYGNED
Ga0211732_11739495	3300020141	Freshwater	MTKISVELDIDQFDKLVVEELIRTRAQFLNDLGANNHVFVYGDQEEDDAEIQKHIDSADQLITWFGTPEQIEEVYGVED
Ga0211732_150403611	3300020141	Freshwater	MNKISVELDIDQFDKLVVGELIRTRAQFLNDLGANNHVFVYGDQEADDAEIQKHIDSADQLIKWFGTPEQIKEVFGDED
Ga0211736_102679914	3300020151	Freshwater	MSKITVELDIEQFDTMVVGELIKTRAQFLNDLGANNHVFVWGDQEADDAEIQKHIDSVDQLIKWFGTPEQIKEVYGNEDG
Ga0211734_1042583511	3300020159	Freshwater	MSKITVELDIEQFDTMVVGELIKTRAQFLNDLGANNHVFVYGDQEEDDAEIQKHIDSADQLITWFGTPEQIEEVYGVED
Ga0211733_110360241	3300020160	Freshwater	MSKITVELDIEQFDTMVVGELIKTRAQFLNDLGANNHVFVWGDQEADDAEIQKHIDSADQLIKWFGTPEQIEEVYGVEDW
Ga0211731_106054934	3300020205	Freshwater	MSKITVELDIEQFDTMVVGELIKTRAQFLNDLGANNHVFVWGDQEADDAEIQKHIDSADQLIKWFGTPEQIEEVYGNEDG
Ga0208596_10260203	3300020534	Freshwater	KLVVEELIRTRDAFLNDLGANNHVFVYGDSEADDIEIQKHIDSTDQLIKWFGTPEQVKRVFGDED
Ga0208228_10281731	3300020535	Freshwater	MKMTKISVELDIDQFDKLVVEELIRTRDAFLNDLGANNHVFVYGDSEADDIEIQKHIDSTDQLIKWFGTPEQVKRVFGDED
Ga0208852_10057752	3300020560	Freshwater	MKMTKISVELDIDQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSVDQLINWFGTPEQIKEVYGNED
Ga0208082_10189665	3300020563	Freshwater	SDQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSADQLIKWFGTPEQIEEVFGNEDG
Ga0208718_10214633	3300020565	Freshwater	MTKISVELDSEQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSADQLIKWFGTPEQIEEVFGNEDG
Ga0208718_10634323	3300020565	Freshwater	MTKISVELDIDQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSADQLIKWFGTPEQI
Ga0208053_10135041	3300020575	Freshwater	SEQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSADQLIKWFGTPEQIEEVFGNEDG
Ga0222714_101203573	3300021961	Estuarine Water	MTKISVELDVDQFDKLVVEELIRTRAGFLNDLGANNHVFVYGDQEADDIEIQKHIDSLDDLIKWFGTPEQVKKVFGDED
Ga0222713_100306654	3300021962	Estuarine Water	MTKISVELDNEQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSLDDLIKWFGTPEQVKKVFGNED
Ga0244777_1000124951	3300024343	Estuarine	MTKITVELDIEQFDTMVVNELIRTREAFLNDIGANNHVFVWDDQEADDIEIQKRIDALELLLKWYATPKQLANIGITDDQG
Ga0244777_107773991	3300024343	Estuarine	LVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSVEQLIKWFGTPEQVKQVFGNEDXXH
Ga0244775_1000233936	3300024346	Estuarine	VTKISVELDSEQFDKVVVEELIRTRQTFLNDLGANNHVFVWGDQEADDIEIQKHIDAAELLLKWFSTKDQLAEMGITDD
Ga0244775_100659472	3300024346	Estuarine	MTKISVELDNEQFDTMVVEELIKTRAGFLNDLGANNHVFVWGDQEADDAEIQKHIDSVDQLINWFGTPEQIKEVYGNED
Ga0244775_101141963	3300024346	Estuarine	MTKISVELDVDQFDKLVVEELIRTRAGFLNDLGANNHVFVYGDQEADDAEIQKHIDSVDQLINWFGTPEQIKEVYGNED
Ga0244775_102186012	3300024346	Estuarine	MTKISVELDVDQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSVDQLIKWFGTPEQIKKVYGNED
Ga0244775_102328253	3300024346	Estuarine	MTKISVELDSEQFDTMVVNELIRTREAFLNRLGANDHVFVWDDQEADDIEIQKRIDALELLLKWYATPKQLANIGITDDQG
Ga0244775_103064163	3300024346	Estuarine	MTKISVELDIDQFDKLVVEELIRTREAFLNDLGANNHVFVYGDQEADDIEIQKHIDSLDDLIKWFGTPEQVKKVFGNED
Ga0244776_100669884	3300024348	Estuarine	MTKISVELDNEQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSVDQLIKWFGTPEQVKQVFGNED
Ga0244776_100811521	3300024348	Estuarine	NEQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSVEQLIKWFGTPEQVKKVFGNED
Ga0208800_10013096	3300027193	Estuarine	LDLSGRRIIVTKISVELDSEQFDKVVVEELIRTRQTFLNDLGANNHVFVWGDQEADDIEIQKHIDAAELLLKWFSTKDQLAEMGITDD
Ga0208800_10391301	3300027193	Estuarine	MTKISVELDNEQFDTMVVEELIKTRAGFLNDLGANNHVFVWGDQEADDAEIQKHIDSVDQLINWFGTPEQIKEVYGNE
Ga0208929_10586823	3300027227	Estuarine	MTKISVELDNEQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSVEQLIKWFGTPEQVKQVFGNED
Ga0208442_10372301	3300027229	Estuarine	DTMVVNELIRTREAFLNDIGANNHVFVWDDQEADDIEIQKRIDALELLLKWYATPKQLANIGITDDQG
Ga0208807_10201443	3300027239	Estuarine	LKMTKITVELDIEQFDTMVVNELIRTREAFLNDIGANNHVFVWDDQEADDIEIQKRIDALELLLKWYATPKQLANIGITDDQG
Ga0208806_10781651	3300027242	Estuarine	MTKISVELDNEQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSVEQLIKWFGTPEQVKQVFGNEDXXH
Ga0208931_10734692	3300027246	Estuarine	MTKISVELDVDQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSVEQLIKWFGTPEQVKQVFGNED
Ga0208027_10888573	3300027260	Estuarine	LVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSVDQLIKWFGTPEQVKQVFGNED
Ga0208441_10833803	3300027294	Estuarine	MTKISVELDVDQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSVEQLIKWFGTPEQVKQVFGNEDXXH
Ga0208168_10747852	3300027305	Estuarine	MTKISVELDNEQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDIEIQKHIDSLDDLIKWFGTPEQVKKVFGNED
Ga0208923_10003406	3300027320	Estuarine	MKMTKISVELDNEQFDTMVVEELIKTRAGFLNDLGANNHVFVWGDQEADDAEIQKHIDSVDQLINWFGTPEQIKEVYGNED
Ga0208923_10615303	3300027320	Estuarine	VTKISVELDSEQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDIEIQKHIDAAELLLKWFSTKDQLAEMGITDD
Ga0208556_10260631	3300027366	Estuarine	MFVNELIRTREAFLNDIGANNHVFVWDDQEADDIEIQKRIDALELLLKWYATPKQLANIGITDDQG
Ga0209247_10678701	3300027468	Freshwater Lake	MHKVEVTLTTDQFDTMVVEELIRTRQTFLNDLGANNHVFVYGDQEADDIEIQKHIDSLDQLIKWFGTEKQIEE
Ga0209552_10191693	3300027563	Freshwater Lake	MTKISVELDVDQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDTEIQKHIDSVDQLIKWFGTPEQIKKVYGNED
Ga0208133_11136743	3300027631	Estuarine	MTKITVELDIEQFDTMVVNELIRTREAFLNDLGANNHVFVWDDQEADDIEIQKRIDALELLLKWYATPEQLANIGITDDQG
Ga0209599_1000012569	3300027710	Deep Subsurface	MTKISVELDVEQFDKLVVEELIRTREAFLNDLGANNHVFVYGDQEADDIEIQKHIDSLDDLIKWFGTPEQVKKVFGDED
Ga0208305_100733623	3300027753	Estuarine	LKMSKITVELDIEQFDTMVVNELIRTREAFLNDIGANNHVFVWDDQEADDIEIQKRIDALELLLKWYATPKQLANIGITDDQG
Ga0209444_1000094119	3300027756	Freshwater Lake	MTKISVELDVDQFDKLVVEELIRTRQKFLNDLGANNHVFVWGDQEADDTEIQKHIDSVDQLIKWFGTPEQVKQVFGNED
Ga0209296_1000034154	3300027759	Freshwater Lake	MHKVEVTLTTDQFDTMVVEELIRTRQTFLNDLGANNHVFVWGDQEADDIEIQKHIDSLDTLINWFATPEQLEECGLSRISDIFPGIDLK
Ga0209354_102456251	3300027808	Freshwater Lake	KMHKVEVTLTTDQFDTMVVEELIRTRQTFLNDLGANNHVFVYGDQEADDIEIQKHIDSLDQLIKWFGTEKQIEEVYGNEG
Ga0209230_100174865	3300027836	Freshwater And Sediment	MTKISVELDIDQFDKLVVEELIRTRAQFLNDLGANANIFVWGDQEADDAEIQKHIDSLDDLIKWFGTPEQVKQVFGNED
Ga0209550_104807542	3300027892	Freshwater Lake	MKMTKISVELDNEQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDTEIQKHIDSVDQLIKWFGTPEQIKEVYGNED
Ga0209550_105315542	3300027892	Freshwater Lake	MTKISVELDIEQFDTMVVNELIRTREAFLNSLGANDHVFVWDDQEADDIEIQKRIDALELLLKWYATPKQLANIGITDD
Ga0315907_100908762	3300031758	Freshwater	MTKISVELDIDQFDKLVVGELIRTRAQFLNDLGANNHVFVYGDQEADDAEIQKHIDSADQLIKWFGTPEQIKEVYGNDDQE
Ga0315904_113848082	3300031951	Freshwater	MTKISVELDVDQFDKLVVEELIRTRAGFLNDLGANNHVFVYGDQEADDIEIQKHIDSLDDLIKWFGTPEQVKQVFGNED
Ga0315905_101190505	3300032092	Freshwater	MTKISVELDVDQFDKLVVEELIKTRKAFLNDLGANNSVFVYGDQEADDIEIQKHIDSLDTLIDWFATPEQLEEHGLTRISDIFPGVDLK
Ga0315905_101640556	3300032092	Freshwater	MTKISVELDNEQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSVERLIKWFGTPEQVKQVFGNED
Ga0315905_107074412	3300032092	Freshwater	MKMTKISVELDIDQFDKLVVGELIRTRAQFLDDLGANNHVFVYGDQEADDAEIQKHIDSTDQLIKWFGTPEQIKEVYGNDDQG
Ga0334991_0003430_5688_5933	3300034013	Freshwater	MKMTKISVELDIDQFDKLVVEELIRTRDAFLNDLGANNHVFVYGDSEADDIEIQKHIDSTDQLIRWFGTPEQVKRVFGDED
Ga0334991_0004610_507_752	3300034013	Freshwater	MKMTKISVELDVDQFDKLVVEELIRTRAGFLNDLGANNHVFVYGDQEADDIEIQKHIDSLDDLIKWFGTPEQVKKVFGDED
Ga0335005_0306077_670_921	3300034022	Freshwater	MKMSKITVELDIEQFDTMVVNELIRTREAFLNDLGANNHVFVWGDQEADGIEIQKRIDALELLLKWYATPEQLANIGITDDQG
Ga0334983_0031226_2047_2292	3300034060	Freshwater	MKMTKISVELDIDQFDKLVVEELIRTRDAFLNDLGANNHVFVYGDQEADDIEIQKHIDSLDDLIKWFGTPEQVKKVFGDED
Ga0334983_0368685_388_627	3300034060	Freshwater	MTKISVELDNEQFDKLVVEELIRTRQKFLNDLGANNHVFVWGDQEADDAEIQKHIDSVEQLIKWYATPKQIKQVFGNED
Ga0335019_0383460_433_678	3300034066	Freshwater	MTKITVELDIEQFDTMVVNELIRTREAFLNDLGANNHVFVWGDQEADGIEIQKRIDALELLLKWYATPEQLANIGITDDQG
Ga0335029_0203742_389_634	3300034102	Freshwater	MSKITVELDIEQFDTMVVNELIRTREAFLNDIGANNHVFVWDDQEADDIEIQKRIDALELLLKWYATPEQLANIGITDDQG
Ga0335029_0240796_228_503	3300034102	Freshwater	MKMTKISVELDVDQFDKLVVEELIRTRAGFLNDLGANNHVFVYGDQEADDIEIQKHIDSLDKLINWFATPEQLEEHGLTRISDIFPGIDLK
Ga0335055_0088727_602_850	3300034110	Freshwater	MKMTKISVELDIDQFDKLVVEELIRTRQTFLNDLGANNHVFVWGDQEADDAEIQKHIDSADQLIKWFGTPEQIEEVFGNEDG
Ga0335033_0481571_111_356	3300034117	Freshwater	MKMTKISVELDNEQFDKLVVEELIRTRQKFLNDLGANNHVFVWGDQEADDAEIQKHIDSVEQLIKWYATPKQIKQVFGNED
Ga0335061_0289292_274_525	3300034168	Freshwater	MKMTKITVELDIEQFDTMVVNELIRTREAFLNDLGANNHVFVWGDQEADGIEIQKRIDALELLLKWYATPEQLANIGITDDQG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070111

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences