Metagenome / Metatranscriptome Family F070083

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070083
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	86 residues
Representative Sequence	MDPVAGWSLLLAAAALLLLAAFPLRTRLPHRVLDALLALGGAGIGVGGLLLLSDVEPASWVVAPVLLAVAAVAHVRFLFAGQGPFRT
Number of Associated Samples	106
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.50 %
% of genes near scaffold ends (potentially truncated)	29.27 %
% of genes from short scaffolds (< 2000 bps)	76.42 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (21.951 % of family members)
Environment Ontology (ENVO)	Unclassified (31.707 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.976 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.13% β-sheet: 0.00% Coil/Unstructured: 40.87%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF12089	DUF3566	40.65
PF03989	DNA_gyraseA_C	4.88
PF07690	MFS_1	2.44
PF13378	MR_MLE_C	1.63
PF11272	DUF3072	1.63
PF03459	TOBE	0.81
PF01098	FTSW_RODA_SPOVE	0.81
PF00583	Acetyltransf_1	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0188	DNA gyrase/topoisomerase IV, subunit A	Replication, recombination and repair [L]	4.88
COG0772	Peptodoglycan polymerase FtsW/RodA/SpoVE	Cell cycle control, cell division, chromosome partitioning [D]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	90.24 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	90.24 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	87.80 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	82.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	82.93 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_107933024	All Organisms → cellular organisms → Bacteria	1893	Open in IMG/M
3300004156\|Ga0062589_102232476	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300005162\|Ga0066814_10006308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1310	Open in IMG/M
3300005166\|Ga0066674_10074200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1560	Open in IMG/M
3300005171\|Ga0066677_10078795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1708	Open in IMG/M
3300005172\|Ga0066683_10087513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1882	Open in IMG/M
3300005172\|Ga0066683_10186920	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300005172\|Ga0066683_10463623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	776	Open in IMG/M
3300005174\|Ga0066680_10014470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4161	Open in IMG/M
3300005178\|Ga0066688_10018252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3657	Open in IMG/M
3300005186\|Ga0066676_10205464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1268	Open in IMG/M
3300005332\|Ga0066388_100000734	All Organisms → cellular organisms → Bacteria	16589	Open in IMG/M
3300005334\|Ga0068869_100229027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1476	Open in IMG/M
3300005406\|Ga0070703_10000002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	167332	Open in IMG/M
3300005440\|Ga0070705_100034067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2844	Open in IMG/M
3300005445\|Ga0070708_100001690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	16963	Open in IMG/M
3300005447\|Ga0066689_10042533	All Organisms → cellular organisms → Bacteria	2395	Open in IMG/M
3300005450\|Ga0066682_10230008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1192	Open in IMG/M
3300005457\|Ga0070662_101474307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300005468\|Ga0070707_101020030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	793	Open in IMG/M
3300005518\|Ga0070699_100626979	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300005546\|Ga0070696_100054289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2791	Open in IMG/M
3300005561\|Ga0066699_10243142	All Organisms → cellular organisms → Bacteria	1267	Open in IMG/M
3300005574\|Ga0066694_10305570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	757	Open in IMG/M
3300005574\|Ga0066694_10346384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	704	Open in IMG/M
3300005587\|Ga0066654_10014910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3000	Open in IMG/M
3300006031\|Ga0066651_10125949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1320	Open in IMG/M
3300006573\|Ga0074055_11174136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300006574\|Ga0074056_11047015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300006574\|Ga0074056_11294349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	698	Open in IMG/M
3300006575\|Ga0074053_11962187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	981	Open in IMG/M
3300006791\|Ga0066653_10436357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	668	Open in IMG/M
3300006796\|Ga0066665_10370469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1174	Open in IMG/M
3300006797\|Ga0066659_10390267	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300009012\|Ga0066710_100075525	All Organisms → cellular organisms → Bacteria	4354	Open in IMG/M
3300009012\|Ga0066710_100327819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2254	Open in IMG/M
3300009012\|Ga0066710_101907677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	889	Open in IMG/M
3300009090\|Ga0099827_10479814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1067	Open in IMG/M
3300009098\|Ga0105245_10101068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2668	Open in IMG/M
3300009137\|Ga0066709_100078672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3920	Open in IMG/M
3300009137\|Ga0066709_100179209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2756	Open in IMG/M
3300009148\|Ga0105243_10237472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1620	Open in IMG/M
3300009162\|Ga0075423_11880925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300010303\|Ga0134082_10045481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1677	Open in IMG/M
3300010320\|Ga0134109_10353261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300010336\|Ga0134071_10339255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	758	Open in IMG/M
3300010366\|Ga0126379_10490365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1298	Open in IMG/M
3300010373\|Ga0134128_10193029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2296	Open in IMG/M
3300010398\|Ga0126383_13399857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300010403\|Ga0134123_12709327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300011107\|Ga0151490_1814109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	896	Open in IMG/M
3300012198\|Ga0137364_10020298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4070	Open in IMG/M
3300012198\|Ga0137364_10101545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2026	Open in IMG/M
3300012198\|Ga0137364_10703816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	762	Open in IMG/M
3300012199\|Ga0137383_10312239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1151	Open in IMG/M
3300012200\|Ga0137382_10305088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1111	Open in IMG/M
3300012200\|Ga0137382_10628300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	768	Open in IMG/M
3300012200\|Ga0137382_10907619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	635	Open in IMG/M
3300012201\|Ga0137365_10210934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1450	Open in IMG/M
3300012206\|Ga0137380_10463256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1120	Open in IMG/M
3300012206\|Ga0137380_10718754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	866	Open in IMG/M
3300012207\|Ga0137381_10112613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2317	Open in IMG/M
3300012207\|Ga0137381_10239057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1577	Open in IMG/M
3300012208\|Ga0137376_10104836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2399	Open in IMG/M
3300012210\|Ga0137378_11002351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	749	Open in IMG/M
3300012285\|Ga0137370_10285711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	983	Open in IMG/M
3300012349\|Ga0137387_10313984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1134	Open in IMG/M
3300012351\|Ga0137386_10866409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	648	Open in IMG/M
3300012356\|Ga0137371_10436352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1014	Open in IMG/M
3300012901\|Ga0157288_10245950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300012951\|Ga0164300_10018054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2388	Open in IMG/M
3300012957\|Ga0164303_10439061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	818	Open in IMG/M
3300012958\|Ga0164299_10006938	All Organisms → cellular organisms → Bacteria	3956	Open in IMG/M
3300012960\|Ga0164301_10348188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1017	Open in IMG/M
3300012960\|Ga0164301_11274444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300012961\|Ga0164302_10168754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1310	Open in IMG/M
3300012975\|Ga0134110_10389859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M
3300012984\|Ga0164309_10216963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1327	Open in IMG/M
3300012985\|Ga0164308_10377234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1153	Open in IMG/M
3300012989\|Ga0164305_10332229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1137	Open in IMG/M
3300013764\|Ga0120111_1071884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	837	Open in IMG/M
3300013770\|Ga0120123_1139666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300014823\|Ga0120170_1046018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1002	Open in IMG/M
3300015358\|Ga0134089_10076568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1255	Open in IMG/M
3300015371\|Ga0132258_10216538	All Organisms → cellular organisms → Bacteria	4656	Open in IMG/M
3300017657\|Ga0134074_1093340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1031	Open in IMG/M
3300018027\|Ga0184605_10008562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3834	Open in IMG/M
3300018073\|Ga0184624_10098854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1246	Open in IMG/M
3300018431\|Ga0066655_10004633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5515	Open in IMG/M
3300018433\|Ga0066667_10111411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1848	Open in IMG/M
3300018433\|Ga0066667_11206542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300018468\|Ga0066662_10449123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1154	Open in IMG/M
3300018482\|Ga0066669_10215164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1486	Open in IMG/M
3300019867\|Ga0193704_1023632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1248	Open in IMG/M
3300019885\|Ga0193747_1069214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	871	Open in IMG/M
3300020002\|Ga0193730_1088176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	872	Open in IMG/M
3300021078\|Ga0210381_10135029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	827	Open in IMG/M
3300021078\|Ga0210381_10226973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300021080\|Ga0210382_10029085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2064	Open in IMG/M
3300021415\|Ga0193694_1007806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1426	Open in IMG/M
3300021418\|Ga0193695_1010039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1878	Open in IMG/M
3300025885\|Ga0207653_10000001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	287007	Open in IMG/M
3300025899\|Ga0207642_10006501	All Organisms → cellular organisms → Bacteria	3892	Open in IMG/M
3300025922\|Ga0207646_11779510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300025981\|Ga0207640_11138263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	692	Open in IMG/M
3300026306\|Ga0209468_1109486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	862	Open in IMG/M
3300026329\|Ga0209375_1075511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1581	Open in IMG/M
3300026547\|Ga0209156_10062503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1932	Open in IMG/M
3300027748\|Ga0209689_1366865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300028381\|Ga0268264_11179674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	775	Open in IMG/M
3300028707\|Ga0307291_1028132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1306	Open in IMG/M
3300028708\|Ga0307295_10006863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2650	Open in IMG/M
3300028714\|Ga0307309_10061637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	837	Open in IMG/M
3300028715\|Ga0307313_10162574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	690	Open in IMG/M
3300028768\|Ga0307280_10001896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5118	Open in IMG/M
3300028784\|Ga0307282_10493676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300028810\|Ga0307294_10400527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300028828\|Ga0307312_10166667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1404	Open in IMG/M
3300028875\|Ga0307289_10135094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1012	Open in IMG/M
3300028878\|Ga0307278_10101019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1297	Open in IMG/M
3300028878\|Ga0307278_10253810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300031200\|Ga0307496_10139907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300031720\|Ga0307469_11705511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	607	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.68%
Host-Associated	Host-Associated	7.32%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.62%
Plants	Host-Associated → Plants	7.32%
Aquatic	Environmental → Aquatic	4.06%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.62%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.25%
Freshwater	Environmental → Aquatic → Freshwater	2.44%
Sediment	Environmental → Aquatic → Sediment	1.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.49%
Loam	Environmental → Terrestrial → Soil → Loam	8.13%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.25%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	26.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.25%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.44%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	21.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.13%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.88%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.44%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.44%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.63%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014823	Permafrost microbial communities from Nunavut, Canada - A3_80cm_0M	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021415	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031200	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1079330244	3300000956	Soil	MDPAGGWSTLVAASAMLLLATFPLRTRLRPPVVDALLALGGAGIGVGGLLLLNDVEPASWVVAPVLLAVAAVAHVRILFAGEGPFRT*
Ga0062589_1022324761	3300004156	Soil	MDPVAGWSVLLAAAALLLLAALPLRTRLPQRVLDALVALGGAGIGVGGLLLLNDVEAASWVVAPVLLAVAAVAHVRFLFAGQGPFRT*
Ga0066814_100063084	3300005162	Soil	PMDPVAGWSFLLAAAALLLLAAFPLRTRLPHGVLDGLLALGGAGIGEGELLLLSDVEPASWVVAPVLLAVAAVAHVRFLFAGQGPFRT*
Ga0066674_100742004	3300005166	Soil	MDPVGGWTALLAALAVLVLAAFPLRTRLRPALVNAMIALGGAGIGVGGLLFLQDVGPGSWVVAPALLAVAAVAHVRFLFAGEGPFRT*
Ga0066677_100787953	3300005171	Soil	MDPVGGWTTLLTALALLVLATFPLRTRLRPALVDAMLALGGAGIGVGGLLFLRDVEPSSWVVAPALLAIAAVAHVRFLFAGEGPFRT*
Ga0066683_100875132	3300005172	Soil	MDPVGGWTTLLAALAVLVLAAFPLRTRLRPALVNAMIALGGAGIGVGGLLFLQDVGPGSWVVAPALLAVAAVAHVRFLFAGEGPFRT*
Ga0066683_101869202	3300005172	Soil	MDPVGGWTTLLAALAVLLLATFPLRTRLRPALVNAMLALGGAGIGVGGLLFLTDVEAGSWVVAPALLAVAAVAHVRFLFAGEGPFRT*
Ga0066683_104636232	3300005172	Soil	MSPVGAWATLLAASAVLVLAAFPLRTRVPPRVVDAVLALGGAGIGVGGLLFLTDVEPASWIVAPAMLAIAAVAHVRLLFAGEGPFRT*
Ga0066680_100144705	3300005174	Soil	MDPVGGWTTLLAALAVLVLATFPLRTRLRPALVNAMLALGGAGIGVGGLLSLRDVEPGSWVVAPALLAVAAVAHVRFLFTGEGPFRT*
Ga0066688_100182525	3300005178	Soil	MDPVGGWTTLLTALALLVLATFPLRTRLRPALVDAMLALGGAGIGVGGLLFLRDVEPGSWVVAPALLAIAAVAHVRFLFAGEGPFRT*
Ga0066676_102054643	3300005186	Soil	MDPVGGWTTLLAALAVLVLAAFPLRTRLRPALVNAMIALGGAGIGVGGLLFLRDVGPGSWVVAPALLAVAAVAHVRFLFAGEGPFRT*
Ga0066388_10000073411	3300005332	Tropical Forest Soil	VHEGLGWAVVTVSTLLLLAAVFPLRTRLPDRVGDGLLGLAGAGIGVGGLLFLDDVGVASWIFAPVFLAVGAIVHVRALFAGAGPFRT*
Ga0068869_1002290272	3300005334	Miscanthus Rhizosphere	MDPVAGWSLLLAAAALLLLAAFPLRTRLPHRVLDALLALGGAGIGVGGLLLLSDVEPASWVVAPVLLAVAAVAHVRFLFAGQGPFRT*
Ga0070703_10000002147	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MDPVGGWTMLLAALALLVLATFPLRTRLRPALVDAMLALGGAGIGVGGLLFLRDVEPGSWVVAPALLAIAAVLHVRFLFAGEGPFRT*
Ga0070705_1000340672	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MLLAALALLVLATFPLRTRLRPALVDSMLALGGAGIGVGGLLFLRDVEPGSWVVAPALLAIAAVLHVRFLFAGEGPFRT*
Ga0070708_1000016908	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLLAALALLVLATFPLRTRLRPALVDAMLALGGAGIGVGGLLFLRDVEPGSWVVAPALLAIAAVLHVRFLFAGEGPFRT*
Ga0066689_100425333	3300005447	Soil	MDPVGGWTTLLTALALLVLATFPLRTRLRPALVDAMLALGGAGVGVGGLLFLRDVEPGSWAVAPALLAIAAVAHVRFLFAGEGPFRT*
Ga0066682_102300083	3300005450	Soil	MSPVGAWATLLAASAVLVLAAFPLRTRVPPRVVDAVLALGGAGIGVGGLLFLTDVEPASWIVAPAMLAIAAVAHVRFLFAGEGPFRT*
Ga0070662_1014743071	3300005457	Corn Rhizosphere	MHPVAGWSFLVAAAALLLLAAFPLRTRLPHRVLDAMLALGGAGVGVGGLLLLSDVEPASWVVAPVLLAVAAIANVRFLFAGEGPFRT*
Ga0070707_1010200302	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	YPRVMDPVGGWSTLLAASAVLLMATFPLRTRLRPPVVDALLGLGGAGIGVGGLLLLNDVEPASWVVAPVLLAAAAVAHVRVLFAAGGPFRT*
Ga0070699_1006269792	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MDPVGGWTTLLVALTVLVLATFPLRTRLRPALVDAMLALGGAGIGVGGLLFLRDVEPGSWVVAPALLAIAAVLHVRFLFAGEGPFRT*
Ga0070696_1000542896	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	AAAALLLLAAFPLRTRLPHRVLDALLALGGAGIGVGGLLLLSDVEPASWVVAPVLLAVAAVAHVRFLFAGQGPFRT*
Ga0066699_102431422	3300005561	Soil	MDPVGGWTTLLTALALLVLATFPLRTRLRPALVDAMLALGGAGVGVGGLLFLRDVEPGSWVVAPALLAIAAVAHVRFLFAGEGPFRT*
Ga0066694_103055701	3300005574	Soil	LLAALAVLVLAAFPLRTRLRPALVNAMIALGGAGIGVGGLLFLRDVGPGSWVVAPALLAVAAVAHVRFLFAGEGPFRT*
Ga0066694_103463842	3300005574	Soil	MSPVGAWATLLAASAVLVLAAFPLRTRVPPRVVDAVLALGGAGIGVGGLLFLTDVEPASWIVAPAMLAIAAVAHVRLL
Ga0066654_100149103	3300005587	Soil	MDPVGGWTTLLAALAVLVLAAFPLRTRLRPALVNAMIALGGAGIGVGGLLFLQDVGPGSWVVAPALLGVAAVAHVRFLFAGEGPFRT*
Ga0066651_101259494	3300006031	Soil	MDPVAGWSFILAAAVLLLVAAFPLRTRLPRRVLDALLAVGGAGIGVGGLLLLSDVEPASWVVAPILLAAAAVAHVRVLFAGQGPFRT*
Ga0074055_111741362	3300006573	Soil	LVVCSAGMDPAGAWTTLLVSAAVVLAAAFPLRTRLREPVVDGLLAVGGAGIGVGGLLFLEDVGLASWVAAPVFLAICAVAHVRVLFAGAGPFRT*
Ga0074056_110470151	3300006574	Soil	MKHQAGSMPWTQPSMSVSIGIDPRGLDLVVCSAGMDPAGAWTTLLVSAAVVLAAAFPLRTRLREPVVDGLLAVGGAGIGVGGLLFLEDVGLASWVAAPVFLAICAVAHVRVLFAGAGPFRT*
Ga0074056_112943492	3300006574	Soil	LLLLAAFPLRTRLPHLVLDGLLALGGAGIGVGGLLLLSDVEPASWVVAPVLLAVAAVAHVRFLFAGQGPFRT*
Ga0074053_119621872	3300006575	Soil	MDPVAGWSFLLAAAALLLLAAFPLRTRLPHGVLDGLLALGGAGIGVGGLLLLSDVEPASWVVAPVLLAVAAVAHVRFLFAGQGPFRT*
Ga0066653_104363572	3300006791	Soil	MDPVGGWTTLLAALAVLALAAFPLRTRLRPALVNAMIALGGAGIGVGGLLFLRDVGPGSWVVAPALLAVAAVAHVRFLFAGEGPFRT*
Ga0066665_103704693	3300006796	Soil	MDPVGGWTTLLAALAVLVLATFPLRTRLRPALVDAMLALGGAGVGVGGLLFLRDVEPGSWVVAPALLAIAAVAHVRFLFAGEGPFRT*
Ga0066659_103902672	3300006797	Soil	MDPVGGWTTLLAALAVLLLATFPLRTRLRPALVDAMLALGGAGIGVGGLLFLTDVEPGSWVVAPTLLAVAAVAHVRFLFAGEGPFRT*
Ga0066710_1000755253	3300009012	Grasslands Soil	MDPVGAWTTILAAVVLLALATFPLRTRLRPRVVDAMLAFGGAGIGVGGLLFLRDVEPGSWALAPALLAIAAVAHVRFLFAGEGPFRT
Ga0066710_1003278194	3300009012	Grasslands Soil	MSPVGAWATLLAASAVLVLAAFPLRTRVPPRVVDAVLALGGAGIGVGGLLFLTDVEPASWIVAPAMLAIAAVAHVRLLFAGEGPFRT
Ga0066710_1019076772	3300009012	Grasslands Soil	MDPVGGWTTLLAALAVLLLATFPLRTRLRPALVNAMLALGGAGIGVGGLLFLTDVEAGSWVVAPALLAVAAVAHVRFLFAGEGPFRT
Ga0099827_104798143	3300009090	Vadose Zone Soil	MDPVGGWTTLLAALAVLVMATFPLRTRLRPAIVDAMLALGGAGIGVGGLLFLRDVEPGSWVVAPALLAIAAVAHVRFLFAGEGPFRT*
Ga0105245_101010685	3300009098	Miscanthus Rhizosphere	MHPVAGWSFLLAAAALLLLAAFPLRTRLPHRVLDALLALGGAGIGVGGLLLLSDVEPASWVVAPVLLAVAAVAHVRFLFAG
Ga0066709_1000786721	3300009137	Grasslands Soil	MSPVGAWATLLAASAVLVLAAFPLRTRVPPRVVDAVLALGGAGIGVGGLLFLTDVEPASWIVAPAMLAIAAVA
Ga0066709_1001792094	3300009137	Grasslands Soil	MEVCIGIGPRRLDLAVSSRSMDPVGAWTTILAAVVLLALATFPLRTRLRPRVVDAMLAFGGAGIGVGGLLFLRDVEPGSWALAPALLAIAAVAHVRFLFAGEGPFRT*
Ga0105243_102374721	3300009148	Miscanthus Rhizosphere	AALLLLAAFPLRTRLPHRVLDALLALGGAGIGVGGLLLLSDVEPASWVVAPVLLAVAAVAHVRFLFAGQGPFRT*
Ga0075423_118809251	3300009162	Populus Rhizosphere	MDPVGGWSTLLVASAVLLLATFPLRARLRPRVVDALLALGGAGVGVGGLLLLNDVEPASWVVAPVLLAVAAVAHVRILFAGQGPFRT*
Ga0134082_100454814	3300010303	Grasslands Soil	MDPVGGWTTLLAALAVLVLAAFPLRTRLRPALVNAMIALGGAGIGVGGLLFLQDVGPGSWVVAPALLAVAAVAHVRFLFAGE
Ga0134109_103532611	3300010320	Grasslands Soil	MDPVGAWTTIVVAITVLVLASFPLRTRLHPRVVDAMLAIGGAGIGVGGLLFLRDVEPGSWVLAPALLAIAAVAHVRFLFAGEGPFRT*
Ga0134071_103392551	3300010336	Grasslands Soil	MDVTLAWTVLVVAVGVLLMASFTLRKRLARPIVDGLLAVAGAGIGVGGLLFLHDVGVASWIVTPFLLAAFAVLHVRALFAGAGPFRT*
Ga0126379_104903651	3300010366	Tropical Forest Soil	ASLALVSVSTIVLVLAAFPLRTRLHPRVVDGLVALAGAGIGVGGLLFLDDVGPGSWIVAPVFLAIGAIAHVRALFAGAGPLRT*
Ga0134128_101930293	3300010373	Terrestrial Soil	MDPVAGWSLLLAAAALLLLAAFPLRTRLPHRVLDALLALGGAGIGVGGLLLLSDVEPASWLVAPVLLAVAAVAHVRFLFAGQGPFRT*
Ga0126383_133998572	3300010398	Tropical Forest Soil	MNVPAALALVSVSTIVLVLAAFPLRTRLHPRVVDGLVALAGAGIGVGGLLFLDDVGPGSWIVAPVFLAIGAIAHVRALFAGAGPLRT*
Ga0134123_127093271	3300010403	Terrestrial Soil	LLVASAVLLLATFPLRARLRPRVVDALLALGGAGVGVGGLLLLSDVEPASWVVAPVLLAVAAVAHVRFLFAGQGPFRT*
Ga0151490_18141092	3300011107	Soil	QPSMSVSIGIDPRRLDLVVCSAGMDPAGAWTTLLVSAAVVLAAAFPLRTRLQEPVVDGLLAVGGAGIGVGGLLFLEDVGPASWVAAPVFLAICAVAHVRVLFAGAGPFRT*
Ga0137364_100202983	3300012198	Vadose Zone Soil	MSPVGAWTTLLAASAVLVLAAFPLRTRVPPRVVDALLALGGAGIGVGGLLFLTDVEPASWIVAPAMLAIAAVAHVRLLFAGEGPFRT*
Ga0137364_101015453	3300012198	Vadose Zone Soil	MDPVGAWTTIVVAIAVLVLASFPLRTRLHPRVVDAMLAIGGAGIGVGGLLFLRDVEPGSWVLAPALLAIAAVAHVRFLFAGEGPFRT*
Ga0137364_107038162	3300012198	Vadose Zone Soil	MDPVGGWTILLAALAVLALTTFPLRTRLPPALVNAMLALGGAGIGVGGLLFLTDVEAGSWVVAPALLAVAAVAHVRFLFAGEGPFRT*
Ga0137383_103122391	3300012199	Vadose Zone Soil	MDPVGGWTTLLAALAVLVLATFPLRTRLRPALVNAMLALGGAGIGVGGLLFLRDVEPGSWVVAPALLAVAAVVHVRFLFTGEGPFRT*
Ga0137382_103050881	3300012200	Vadose Zone Soil	MDPVAGWSFLLAAALLLLAVFLFRTPLPQHVLDALLALGGAGIGVGGLLLLSDVEPASWVVAPVLLAGAAVAHVRVLFAGQGPFRT*
Ga0137382_106283001	3300012200	Vadose Zone Soil	MDPVGAWTTIVVAIAVLVLASFPLRTRLHPRVVDAMLAIGGAGIGVGGLLFLRDVEPGSWVLAPALLGVAAVAHVRFLFAGEGPFRT*
Ga0137382_109076191	3300012200	Vadose Zone Soil	MDPVAGWSFLLAAAALLLLAAFPLRSRLPHHVLDALLALGGAGIGVGGLLLLSDVEPASWVVAPVLLAVAAV
Ga0137365_102109342	3300012201	Vadose Zone Soil	MSPVGAWTTLLAASAVLVLAAFPLRTRVPPRVVDALLALGGAGIGVGGLLFLTDVEPASWIVAPAMLAIAAVAHVRFLFAGEGPFRT*
Ga0137380_104632562	3300012206	Vadose Zone Soil	MDPVGGWTALLAALAVLVMATFPLRTRLRPAIVDAMLALGGAGIGVGGLLFLRDVEPGSWVVAPALLAIAAVAHVRFLFAGEGPFRT*
Ga0137380_107187541	3300012206	Vadose Zone Soil	MSPVGAWTTLLAASAVLVLAAFPLRTRVPPRVVDAVLALGGAGIGVGGLLYLTDVEPASWIVAPAMLAIAA
Ga0137381_101126132	3300012207	Vadose Zone Soil	MSPVGAWTTLLAASAVLVLAAFPLRTRVPPRVVDAVLALGGAGIGVGGLLYLTDVEPASWIVAPAMLAIAAVAHVRLLFAGEGPFRT*
Ga0137381_102390574	3300012207	Vadose Zone Soil	MDPVGGWTTLLAALAVLALATFPLRTRLRPALVDAMLAVGGAGIGVGGLLFIKDVEPASWVVAPALLAIAAVAHVRFLFAGEGPFRT*
Ga0137376_101048364	3300012208	Vadose Zone Soil	MSPVGAWTTLLAASAVLVLAAFPLRTRVPPRVVDAVLALGGAGIGVGGLLFLTDVEPASWIVAPAMLAIAAVAHVRLLFAGEGPFRT*
Ga0137378_110023512	3300012210	Vadose Zone Soil	MDPVGGWTALLAALAVLVMATFPLRTRLRPAIVDAMLALGGAGIGVGGLLFLRDVEPGSWVVAPALLAVAAVVHVRFLFTGEGPFRT*
Ga0137370_102857113	3300012285	Vadose Zone Soil	MSPVGALTTLLAASAVLVLAAFPLRTRVPPRVVDALLALGGAGIGVGGLLFLTDVEPASWIVAPAMLAIAAVAHVRLLFAGEGPFRT*
Ga0137387_103139842	3300012349	Vadose Zone Soil	MDPVGGWTALLAALAVLVMATFPLRTRLRPAIVYAMLALGGAGIGVGGLLFLRDVEPGSWVVAPALLAIAAVAHVRFLFAGEGPFRT*
Ga0137386_108664092	3300012351	Vadose Zone Soil	MDPVGGWTTLLAALAVLLLATFPLRTRLRPALVNAMLALGGAGIGVGGLLFLTDVEPGSWVVAPALLAIAAVAHVRFLFAGEGPFRT*
Ga0137371_104363523	3300012356	Vadose Zone Soil	MDPVGGWTTLLAALAVLLLATFPLRTRLRPALVNAMLALGGAGIGVGGLLFLRDVAPGSWLVAPALLAVAAVAHVRFLFAGEGPLRT*
Ga0157288_102459502	3300012901	Soil	MDPVAGWSVLLAAAALLLLAALPLRTRLPQRVLDALVALGGAGIGVGGLLLLNDVEAASWVVAPVLLAVAAVANVRFLFAGQGPFRT*
Ga0164300_100180543	3300012951	Soil	MDPVAGWSLLLAAAALLLVATFPLRTRLPHRVLDALLALGGAGIGVGGLLLLSDVEPASWVVAPVVLAVAAVAHVRFLFAGQGPFRT*
Ga0164303_104390612	3300012957	Soil	MDPVAGWSFLLAAAALLLLAAFPLRTRLPHRVLDALLALGGAGIGVGGLLLLSDVEPASWVVAPVLLAVATVAHVRFLFAGQGPFRT*
Ga0164299_100069382	3300012958	Soil	MHLVAGWSLLLAAAALLLLAAFPLRTRLPHRVLDALLALGGAGIGVGGLLLLSDVEPASWVVAPVVLAVAAVAHVRFLFAGQGPFRT*
Ga0164301_103481881	3300012960	Soil	MDPVAGWSLLLAAAALLLVATFPLRTRLPHRVLDALLALGGAGIGVGGLLLLNDVAPASWVVAPVLLAVAAVAHVRFLFAGQGPFRT*
Ga0164301_112744441	3300012960	Soil	PVAGWTLLLAAAALLLLAVFPLRTRLPHRVLDALLALGGAGIGVGGLLLLSGVEPASWGVAPGLLAVAAVAHVRFLFAGQGPFRT*
Ga0164302_101687542	3300012961	Soil	MDPVAGWSLLLAAAALLLVATFPLRTRLPHRVLDALLALGGAGIGVGGLLLLNDVEPASWVVAPVLLAVAAVAHVRFLFAGQGPFRT*
Ga0134110_103898592	3300012975	Grasslands Soil	MDPVGGWTTLLAALAVLALTTFPLRTRLPPALVNAMLALGGAGIGVGGLLFLRDVEPGSWLVAPALLAVAAVAHVRFLFAGEGPFRT*
Ga0164309_102169632	3300012984	Soil	MHLVAGWSLLLAAAALLLLAAAALLLVATFPLRTRLPHRVLDALLALGGAGIGVGGLLLLNDVEPASWVVAPVLLAVAAVAHVRFLFAGQGPFRT*
Ga0164308_103772341	3300012985	Soil	MDPVAGWSLLLAAAALLLVAAFLLRTRLPHRVLDALLALGGAGIGVGGLLLLSDVEPASWVVAPVLLAVAAVAHVRFLFAGQGPFRT*
Ga0164305_103322292	3300012989	Soil	MHLVAGWSLLLAAAALLLLAAFPLRTRLPHRVLDALLALGGAGIGVGGLLLLSDVEPASWVVAPVLLAVAAVAHVRFLFAGQGPFRT*
Ga0120111_10718842	3300013764	Permafrost	MDPVGGWTTLLVALTVLVLATFPLRTRLGPALVDAMLALGGAGIGVGGLLFLRDVEPGSWVVAPALLAIAAVAHVRFLFAGEGPFRT*
Ga0120123_11396661	3300013770	Permafrost	ASFLPAPPWFAAATVGLTVLVLATFLLRTRLGPALVDAMLALGGAGIGGGGLLVLRDVEPGSWVVAPALLAIAAVAHVRFLFAGEGPFRT*
Ga0120170_10460182	3300014823	Permafrost	MDPVGGWTTLLAALAVLVLATFPLRTRLRPALVNAMLALGGAGIGVGGLLFLRDVEAGSWVVAPGLLAIAAVAHVRFLFAGEGPFRT*
Ga0134089_100765681	3300015358	Grasslands Soil	MDPVGGWTTLLAALAVLVLAAFPLRTRLRPALVNAMIALGGAGIGVGGLLFLQDVGPGSWVVAPALLAVAA
Ga0132258_102165383	3300015371	Arabidopsis Rhizosphere	MDPVGGWSSLLAAAALLLLAAFPLRTRLPRRLIDGLLALGGAGIGVGGLLLLSDVEPASWVVAPVLLGVAAVAHVRFLFAGQGPFRT*
Ga0134074_10933403	3300017657	Grasslands Soil	MDPVGGWTTLLAALAVLVLAAFPLRTRLRPALVNAMIALGGAGIGVGGLLFLQDVGPGSWVVAPALLAVAAVAHVRFLFAG
Ga0184605_100085627	3300018027	Groundwater Sediment	MDPVAGWSFLLAAAALLLLAAFPLRTRLPHRVLDALLALGGAGVGLGGLLLLSDVEPASWVVAPVLLAAAAVAHVRFLFAGQGPFRT
Ga0184624_100988542	3300018073	Groundwater Sediment	MDPVAGWSFLLAAAALLLLAAFPLRTRLPHRVLDGLLAFGGAGIGVGGLLLLSDVEPASWVVAPVLLAAAAVAHVRFLFAGQGPFRT
Ga0066655_100046336	3300018431	Grasslands Soil	MDPVGGWTTLLAALAVLGLAAFPLRTRLRPALVNAMLALGGAGIGVGGLLFLTDVEAGSWVVAPALLAVAAVAHVRFLFAGEGPFRT
Ga0066667_101114114	3300018433	Grasslands Soil	MDPVGAWTTIVVAIAVLVLASFPLRARLHPRVVDAMLAIGGAGIGVGGLLFLRDVEPGSWVLAPALLAIAAVAHVRFLFAGEGPFRT
Ga0066667_112065422	3300018433	Grasslands Soil	MDLVGGWTTLLTALALLVLATFPLRTRLRPALVDAMLALGGAGVGVGGLLFLRDVEPSSWVVTPALLAIATVAHVRFLFAGEGPFRT
Ga0066662_104491231	3300018468	Grasslands Soil	MDPVGGWTTLLAALAVLVLATFPLRTRLRPALVNAMLALGGAGIGVGGLLSLRDVEPGSWVVAPALLAVAAVAHVRFLFTGEGPFRT
Ga0066669_102151644	3300018482	Grasslands Soil	MSPVGALTTLLAASAVLVLAAFPLRTRVPSRVVDALLALGGAGIGVGGLLFLTDVEPASWIVAPAMLAIAAVAHVRFLFAGEGPFRT
Ga0193704_10236321	3300019867	Soil	MDPVAGWSFLLAAAALLLLAAFPLRTRLPHRVLDALLALGGAGIGVGGLLLLSDVELGSWVVAPVLLAVAA
Ga0193747_10692142	3300019885	Soil	SSPYPRPMDPVAGWSFLLAAAALLLLAAFPLRTRLPHRVLDALLALGGAGVGLGGLLLLSDVEPASWVVAPVLLAVAAVAHVRFLFAGQGPFRT
Ga0193730_10881762	3300020002	Soil	MDTVAGWSSLLAAAALLLLAAFPLRTRLPHRVLDGLLALGGAGIGAGGLLLLSDVEPASWVVAPVLLAVAAVAHVRFLWAGEGPFRT
Ga0210381_101350292	3300021078	Groundwater Sediment	MHPVAGWSFLLAAAALLLLAAFPFRTRLPHRVLDALLALGGAGIGVGGLLLLSDVELGSWVVAPVLLAVAAVAHVRFLFAGQGPFRT
Ga0210381_102269731	3300021078	Groundwater Sediment	MDPVAGWSLLLAAAALLLLAVFPFRIRLPHRVLDALLALGGAGIGVGGLLLLSDVEPASWVVAPVLLAVAAVAHVRFLFAGQGPFRT
Ga0210382_100290852	3300021080	Groundwater Sediment	MDPVAGWSFLLAAAALLLLAAFPLRTRLPHRVLDALLALGGAGVGLGGLLLLSDVEPASWVVAPVLLAVAAVAHVRFLWAGEGPFRT
Ga0193694_10078064	3300021415	Soil	MDPVAGWSFLLAAAALLLLAAFPLRTRLPHRVLDALLALGGAGIGVGGLLLLTDVEPASWVVSPVLLAVAAV
Ga0193695_10100394	3300021418	Soil	MDTVAGWSSLLAAAALLLLAAFPLRTRLPHRVLDALLALGGAGIGVGGLLLLTDVEPASWVVSPVLLAVAAVAHVRVLFAGEGPFRT
Ga0207653_1000000158	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MDPVGGWTMLLAALALLVLATFPLRTRLRPALVDAMLALGGAGIGVGGLLFLRDVEPGSWVVAPALLAIAAVLHVRFLFAGEGPFRT
Ga0207642_100065015	3300025899	Miscanthus Rhizosphere	MDPVAGWSLLLAAAALLLLAAFPLRTRLPHRVLDALLALGGAGIGVGGLLLLSDVEPASWVVAPVLLAVAAVAHVRFLFAGQGPFRT
Ga0207646_117795101	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	PYPRVMDPVGGWSTLLAASAVLLMATFPLRTRLRPPVVDALLGLGGAGIGVGGLLLLNDVEPASWVVAPVLLAAAAVAHVRVLFAAGGPFRT
Ga0207640_111382631	3300025981	Corn Rhizosphere	MDPVAGWSLLLAAAALLLLAAFPLRTRLPHRVLDALLALGGAGIGVGGLLLLSDVEPASWVVAPVLLAVAAVA
Ga0209468_11094862	3300026306	Soil	MDPVGGWTALLAALAVLVLAAFPLRTRLRPALVNAMIALGGAGIGVGGLLFLQDVGPGSWVVAPALLAVAAVAHVRFLFAGEGPFRT
Ga0209375_10755112	3300026329	Soil	MDPVGGWTTLLAALAVLVLAAFPLRTRLRPALVNAMIALGGAGIGVGGLLFLQDVGPGSWVVAPALLAVAAVAHVRFLFAGEGPFRT
Ga0209156_100625032	3300026547	Soil	MDPVGGWTTLLAALAVLVLAAFPLRTRLRPALVNAMIALGGAGIGVGGLLFLRDVGPGSWVVAPALLAVAAVAHVRFLFAGEGPFRT
Ga0209689_13668651	3300027748	Soil	GGWTTLLTALALLVLATFPLRTRLRPALVDAMLALGGAGVGVGGLLFLRDVEPGSWVVAPALLAIAAVAHVRFLFAGEGPFRT
Ga0268264_111796742	3300028381	Switchgrass Rhizosphere	FLLAAAALLLLAAFPLRTRLPHRVLDAMLALGGAGVGVGGLLLLSDVEPASWVVAPVLLAVAAIANVRFLFAGEGPFRT
Ga0307291_10281323	3300028707	Soil	MDPVAGWSFLLAAAALLLLAAFPLRTRLPHRVLDALLALGGAGIGVGGLLLLSDVELGSWVVAPVLLAVAAVAHVRFLFAGQGPFRT
Ga0307295_100068631	3300028708	Soil	LTDPYPRPMDPVAGWSFLLAAAALLLLAAFPLRTRLPHRVLDALLALGGAGVGLGGLLLLSDVEPASWVVAPVLLAAAAVAHVRFLFAGQGPFRT
Ga0307309_100616372	3300028714	Soil	LLLAAFPFRTRLPHRVLDALLALGGAGIGVGGLLLLSDVELGSWVVAPVLLAVAAVAHVRFLFAGQGPFRT
Ga0307313_101625742	3300028715	Soil	MDPVAGWSVLLAAAALLLLAALPLRTRLPQRVLDALVALGGAGIGVGGLLLLNDVEAASWVVAPVLLAVAAVAHVRFLFAGQGPFRT
Ga0307280_100018965	3300028768	Soil	MDPVAGWSFLLAAAALLLLAAFPLRTRLPHRVLDALLALGGAGVGLGGLLLLSDVELASWVVAPVLLAAAAVAHVRFLFAGQGPFRT
Ga0307282_104936762	3300028784	Soil	RAASAPTHGLLTEPYPRPMDPVAGWSSLLAAAALLLLAAFPLRTRLPHRVRDALLALGGAGIGAGGLLLLSDVEPASWVVAPVLLAVAAVAHVRFLWAGEGPFRT
Ga0307294_104005272	3300028810	Soil	DPVAGWSFLLAAAALLLLAAFPLRTRLPHRVLDALLALGGAGIGVGGLLLLSDVELGSWVVAPVLLAVAAVAHVRFLFAGQGPFRT
Ga0307312_101666671	3300028828	Soil	MDPIGAWTTLLVAAAVLVLATFPLRTRLRPRVVDGLLALGGAGIGVGGLLFLTDVEPASWVVAPALLAIAAVAHVRVLFAGKGPFRT
Ga0307289_101350943	3300028875	Soil	MDPVAGWSLLLAAAALLLLAVFPFRIRLPHRVLDALLALGGAGVGVGGLLLLSDVEPASWVVAPVLLAVAAVAHVRFLFAG
Ga0307278_101010192	3300028878	Soil	MDPIGGWTTLLVAAAVLLLATFPLRTRLRPWVVDVTLALGGAGVGVGGLLLLSDVEAASWVVAPVLLAIAAVAHVRFLFAGEGPFRT
Ga0307278_102538102	3300028878	Soil	MDPVGGWSCLLAAAALLLLAAFPLRTRLPHRVLDALLALGGAGIGVGGLLLLSDVEPASWVVAPVLLAVAAVAHVRVLFAGQGPFRT
Ga0307496_101399072	3300031200	Soil	AGWSLLLAAAALLLLAAFPLRTRLPHRVLDALLALGGAGIGVGGLLLLSDVEPASWVVAPVLLAVAAVAHVRFLFAGQGPFRT
Ga0307469_117055111	3300031720	Hardwood Forest Soil	MDPVAGWSLLLAAAALLLLAAFPLRTRLPHRVLDALLALGGAGIGVGGLLLLSDVEPASWVVAPVLLAVAAVAHARFLFAGQGPFRT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070083

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences