NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F070081

Metagenome / Metatranscriptome Family F070081

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F070081
Family Type Metagenome / Metatranscriptome
Number of Sequences 123
Average Sequence Length 50 residues
Representative Sequence MEPTDTNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIGGRHVLHLAC
Number of Associated Samples 109
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 4.88 %
% of genes near scaffold ends (potentially truncated) 99.19 %
% of genes from short scaffolds (< 2000 bps) 91.06 %
Associated GOLD sequencing projects 107
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.187 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(22.764 % of family members)
Environment Ontology (ENVO) Unclassified
(34.959 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.407 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 40.00%    β-sheet: 0.00%    Coil/Unstructured: 60.00%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF13561adh_short_C2 90.24
PF00892EamA 4.07
PF07690MFS_1 2.44
PF02810SEC-C 0.81
PF07883Cupin_2 0.81
PF14028Lant_dehydr_C 0.81
PF14696Glyoxalase_5 0.81



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.19 %
UnclassifiedrootN/A0.81 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908016|OU_2_1_1_newblercontig46908All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium519Open in IMG/M
2228664022|INPgaii200_c0975097All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium713Open in IMG/M
3300000891|JGI10214J12806_11987762All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium696Open in IMG/M
3300000956|JGI10216J12902_106850380All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium618Open in IMG/M
3300000956|JGI10216J12902_108048709All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium571Open in IMG/M
3300000956|JGI10216J12902_113054252All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium561Open in IMG/M
3300001305|C688J14111_10300878All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium508Open in IMG/M
3300003659|JGI25404J52841_10134952All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium522Open in IMG/M
3300004479|Ga0062595_100157920All Organisms → cellular organisms → Bacteria1333Open in IMG/M
3300004643|Ga0062591_100926696All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium820Open in IMG/M
3300005093|Ga0062594_102776903All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium544Open in IMG/M
3300005180|Ga0066685_10360832All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1009Open in IMG/M
3300005294|Ga0065705_10737340All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium636Open in IMG/M
3300005329|Ga0070683_101519058All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium644Open in IMG/M
3300005341|Ga0070691_10743204All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium593Open in IMG/M
3300005366|Ga0070659_100022797All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia4783Open in IMG/M
3300005406|Ga0070703_10408736All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium593Open in IMG/M
3300005454|Ga0066687_10826355All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium552Open in IMG/M
3300005458|Ga0070681_10109450All Organisms → cellular organisms → Bacteria2703Open in IMG/M
3300005545|Ga0070695_100515408All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium927Open in IMG/M
3300005553|Ga0066695_10568665All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium686Open in IMG/M
3300005558|Ga0066698_10296420All Organisms → cellular organisms → Bacteria1120Open in IMG/M
3300005558|Ga0066698_10456740All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium871Open in IMG/M
3300005719|Ga0068861_100058450All Organisms → cellular organisms → Bacteria2949Open in IMG/M
3300005719|Ga0068861_100154074All Organisms → cellular organisms → Bacteria1888Open in IMG/M
3300005983|Ga0081540_1341127All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium513Open in IMG/M
3300006574|Ga0074056_11595677All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium507Open in IMG/M
3300006576|Ga0074047_11780213All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium672Open in IMG/M
3300006954|Ga0079219_11970368All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium554Open in IMG/M
3300007821|Ga0104323_127903All Organisms → cellular organisms → Bacteria2400Open in IMG/M
3300009094|Ga0111539_11092704All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium927Open in IMG/M
3300009100|Ga0075418_12425040All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium572Open in IMG/M
3300009101|Ga0105247_10745761All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium742Open in IMG/M
3300009162|Ga0075423_11134247All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium833Open in IMG/M
3300009551|Ga0105238_11768166All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium650Open in IMG/M
3300009792|Ga0126374_10533877All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium853Open in IMG/M
3300010039|Ga0126309_10845272All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium602Open in IMG/M
3300010041|Ga0126312_10718992All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium722Open in IMG/M
3300010045|Ga0126311_10821376All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium750Open in IMG/M
3300010047|Ga0126382_11618465Not Available601Open in IMG/M
3300010321|Ga0134067_10145068All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium843Open in IMG/M
3300010358|Ga0126370_10836427All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium825Open in IMG/M
3300010359|Ga0126376_10688687All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium981Open in IMG/M
3300010373|Ga0134128_11760397All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium682Open in IMG/M
3300010373|Ga0134128_12913263All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium527Open in IMG/M
3300012019|Ga0120139_1090433All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium762Open in IMG/M
3300012211|Ga0137377_11619477All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium571Open in IMG/M
3300012212|Ga0150985_110013181All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium535Open in IMG/M
3300012351|Ga0137386_11219056All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium525Open in IMG/M
3300012355|Ga0137369_10549992All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium809Open in IMG/M
3300012356|Ga0137371_10246484All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1395Open in IMG/M
3300012356|Ga0137371_10812600All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium712Open in IMG/M
3300012477|Ga0157336_1039650All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium503Open in IMG/M
3300012505|Ga0157339_1054752All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium538Open in IMG/M
3300012899|Ga0157299_10154545All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium652Open in IMG/M
3300012975|Ga0134110_10089235All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1239Open in IMG/M
3300012986|Ga0164304_10601372All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium821Open in IMG/M
3300012988|Ga0164306_11955071All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium510Open in IMG/M
3300012989|Ga0164305_10904663All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium742Open in IMG/M
3300012989|Ga0164305_10927188All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium734Open in IMG/M
3300013758|Ga0120147_1088883All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium522Open in IMG/M
3300014157|Ga0134078_10300709All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium690Open in IMG/M
3300015359|Ga0134085_10483882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium564Open in IMG/M
3300018029|Ga0187787_10382674All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium550Open in IMG/M
3300019279|Ga0184642_1174198All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium587Open in IMG/M
3300019878|Ga0193715_1022561All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1367Open in IMG/M
3300020005|Ga0193697_1086086All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium760Open in IMG/M
3300020022|Ga0193733_1125901All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium705Open in IMG/M
3300021080|Ga0210382_10341315All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium661Open in IMG/M
3300021363|Ga0193699_10494381All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium500Open in IMG/M
3300023057|Ga0247797_1002103All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1946Open in IMG/M
3300024055|Ga0247794_10001514All Organisms → cellular organisms → Bacteria4499Open in IMG/M
3300024181|Ga0247693_1046649All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium621Open in IMG/M
3300024284|Ga0247671_1015124All Organisms → cellular organisms → Bacteria1154Open in IMG/M
3300024323|Ga0247666_1104859All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium561Open in IMG/M
3300025556|Ga0210120_1036774All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium953Open in IMG/M
3300025910|Ga0207684_10448855All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1107Open in IMG/M
3300025920|Ga0207649_11220144All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium594Open in IMG/M
3300025927|Ga0207687_10077818All Organisms → cellular organisms → Bacteria2386Open in IMG/M
3300025927|Ga0207687_11719002All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium538Open in IMG/M
3300025931|Ga0207644_10644984All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium881Open in IMG/M
3300025931|Ga0207644_11669670All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium534Open in IMG/M
3300025934|Ga0207686_11766380All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium512Open in IMG/M
3300025937|Ga0207669_10573163All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium914Open in IMG/M
3300025942|Ga0207689_11123876All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium662Open in IMG/M
3300025945|Ga0207679_11749432All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium568Open in IMG/M
3300025960|Ga0207651_10076519All Organisms → cellular organisms → Bacteria2393Open in IMG/M
3300025960|Ga0207651_12029513All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium517Open in IMG/M
3300025961|Ga0207712_10074185All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2456Open in IMG/M
3300025972|Ga0207668_10630574All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium936Open in IMG/M
3300025972|Ga0207668_11065410All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium724Open in IMG/M
3300026095|Ga0207676_10437357All Organisms → cellular organisms → Bacteria1230Open in IMG/M
3300026827|Ga0207591_101365All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium919Open in IMG/M
3300027036|Ga0207467_1011785All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium678Open in IMG/M
3300027787|Ga0209074_10413946All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium568Open in IMG/M
3300027907|Ga0207428_10979740All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium595Open in IMG/M
3300028065|Ga0247685_1005006All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1710Open in IMG/M
3300028380|Ga0268265_10078766All Organisms → cellular organisms → Bacteria2593Open in IMG/M
3300028707|Ga0307291_1112264All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium683Open in IMG/M
3300028707|Ga0307291_1141022All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium611Open in IMG/M
3300028718|Ga0307307_10044748All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1285Open in IMG/M
3300028720|Ga0307317_10111198All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium911Open in IMG/M
3300028755|Ga0307316_10167852All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium785Open in IMG/M
3300028768|Ga0307280_10347070All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium547Open in IMG/M
3300028782|Ga0307306_10005263All Organisms → cellular organisms → Bacteria2676Open in IMG/M
3300028782|Ga0307306_10010044All Organisms → cellular organisms → Bacteria2017Open in IMG/M
3300028793|Ga0307299_10094192All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1117Open in IMG/M
3300028799|Ga0307284_10259659All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium692Open in IMG/M
3300028810|Ga0307294_10236453All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium643Open in IMG/M
3300028878|Ga0307278_10106271All Organisms → cellular organisms → Bacteria1262Open in IMG/M
3300028880|Ga0307300_10118878All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium811Open in IMG/M
3300028885|Ga0307304_10409385All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium613Open in IMG/M
3300030336|Ga0247826_11279442All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium590Open in IMG/M
3300030511|Ga0268241_10086577All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium713Open in IMG/M
3300031184|Ga0307499_10260069All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium558Open in IMG/M
3300031184|Ga0307499_10286986All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium538Open in IMG/M
3300031226|Ga0307497_10356971All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium687Open in IMG/M
3300031547|Ga0310887_10255073All Organisms → cellular organisms → Bacteria981Open in IMG/M
3300031858|Ga0310892_10156039All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1329Open in IMG/M
3300031995|Ga0307409_101991718All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium610Open in IMG/M
3300033004|Ga0335084_11581021All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium647Open in IMG/M
3300033412|Ga0310810_10590893All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1070Open in IMG/M
3300033550|Ga0247829_11117092All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium654Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil22.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.13%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.88%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.06%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.06%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.25%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.25%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.25%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.25%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.25%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.25%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.25%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.44%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.44%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.44%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.44%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.63%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.63%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.63%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.63%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.63%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere1.63%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere1.63%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.63%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.81%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.81%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.81%
Environmental → Unclassified → Unclassified → Unclassified → Unclassified → 0.81%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.81%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908016Sample 642EnvironmentalOpen in IMG/M
2228664022Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001305Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300003659Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1Host-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005983Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1Host-AssociatedOpen in IMG/M
3300006574Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006576Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007821Permafrost core soil microbial communities from Svalbard, Norway - sample 2-10-2 SoapdenovoEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300012019Permafrost microbial communities from Nunavut, Canada - A7_5cm_12MEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012477Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.3.yng.040610Host-AssociatedOpen in IMG/M
3300012505Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610Host-AssociatedOpen in IMG/M
3300012899Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2EnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013758Permafrost microbial communities from Nunavut, Canada - A24_65cm_12MEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300018029Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MGEnvironmentalOpen in IMG/M
3300019279Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300020005Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021363Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2EnvironmentalOpen in IMG/M
3300023057Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6EnvironmentalOpen in IMG/M
3300024055Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6EnvironmentalOpen in IMG/M
3300024181Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34EnvironmentalOpen in IMG/M
3300024284Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK12EnvironmentalOpen in IMG/M
3300024323Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07EnvironmentalOpen in IMG/M
3300025556Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026827Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A4-11 (SPAdes)EnvironmentalOpen in IMG/M
3300027036Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G07A5-10 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028065Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK26EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028707Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028720Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028782Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028810Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300030511Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)EnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
OU_021613202124908016MEPTDTNLRAWDEAHRSLRRGGGRRGLPKPVRERLPDLDGRHVLHL
INPgaii200_097509722228664022SoilMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIGGRHVLHLASGA
JGI10214J12806_1198776213300000891SoilMEPTDTNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIGR
JGI10216J12902_10685038023300000956SoilMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIAGRHVLHLACGAGRETA
JGI10216J12902_10804870913300000956SoilMEPTDTNLRAWEEAHRSLRRGGGRRGLPKPVRERLPG
JGI10216J12902_11305425213300000956SoilMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERMPDIAGRHVLHLACGAGRETAALMSLGA
C688J14111_1030087813300001305SoilMEPTEGNLRAWEEAHKKIRRSSTRGTRTLPKPVRERLPDIGGR
JGI25404J52841_1013495213300003659Tabebuia Heterophylla RhizosphereMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIGG
Ga0062595_10015792033300004479SoilMEPTEGNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIAGRHVLHLACGAGRETAALMSLGAL
Ga0062591_10092669623300004643SoilVEPTDTNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDVGGRHLLHLACGAGR
Ga0062594_10277690323300005093SoilMEPTDTNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIGGRHVLHLASGAGRE
Ga0066685_1036083213300005180SoilMEPTDTNLRAWDEAHRSLRRGGGRRGLPKPVRERLPDLEGRHVLHLGSGAGRETAALI
Ga0065705_1073734023300005294Switchgrass RhizosphereMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIGGRHVLHLASGAGRE
Ga0070683_10151905813300005329Corn RhizosphereVEPTDTNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDVGGRHLLHLACGAGRETAALMSL
Ga0070691_1074320423300005341Corn, Switchgrass And Miscanthus RhizosphereMEPTDTNLRAWEDAHRKLRRGGGRRGLPKPVRERLPDLDGR
Ga0070659_10002279763300005366Corn RhizosphereMEPTDSNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDI
Ga0070703_1040873623300005406Corn, Switchgrass And Miscanthus RhizosphereMEPTDSNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIGGRHV
Ga0066687_1082635523300005454SoilMEPTEGNLRAWEEAHRSLRRRGGQRGLPKPVRERLPDLDGRHVLHLSCGAGRETA
Ga0070681_1010945013300005458Corn RhizosphereMEPTDTNLRAWEDAHRKLRRGGGRRGLPKPVRERLPDLDGRHVLHLTCGAGRETAALIGLGAL
Ga0070695_10051540823300005545Corn, Switchgrass And Miscanthus RhizosphereMEPTDTNLRAWEEAHRSLRRGGGRRGLPKPVRERLPDLEG
Ga0066695_1056866523300005553SoilMEPTDTNLRAWEEAHRSLRRGGGRRGLPKPVRERL
Ga0066698_1029642033300005558SoilMEPTDTNLRAWDEAHRSLRRGGGRRGLPKPVRERLPDLEGRHVLHLGC
Ga0066698_1045674013300005558SoilMEPTDTNLRAWDEAHRSLRRGGGRRGLPKPVRERLPDLEGRHVLHLGSGAGRE
Ga0068861_10005845013300005719Switchgrass RhizosphereMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIAGRHVLHLACG
Ga0068861_10015407413300005719Switchgrass RhizosphereMEPTDSNLRAWEEAHKRIRRSSARGSRTLPKPVRERLP
Ga0081540_134112723300005983Tabebuia Heterophylla RhizosphereMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIGGRPALPLSGGAR
Ga0074056_1159567723300006574SoilMEPTEGNLRAWEEAHRSLRRRGGRRGLPKPVRERLPDLEGRNVLHLTCGAGRETA
Ga0074047_1178021323300006576SoilMEPTEGNLRAWEEAHRSLRRRGGRRGLPKPVRERLPD
Ga0079219_1197036823300006954Agricultural SoilMEPTDTNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIGGRHLLHLACGAGR
Ga0104323_12790353300007821SoilMEPTEGNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIAGRHVLHLA
Ga0111539_1109270413300009094Populus RhizosphereMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIGGRHLLHLACGAGRETAALMSL
Ga0075418_1242504013300009100Populus RhizosphereMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERMPDIAGRHVLHLA
Ga0105247_1074576123300009101Switchgrass RhizosphereMEPTDTNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIGGRHLLHLAC
Ga0075423_1113424723300009162Populus RhizosphereMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIGGRHLLHLACGAGRETAALM
Ga0105238_1176816623300009551Corn RhizosphereMEPTDSNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIGGRHVLHLACGAGRE
Ga0126374_1053387713300009792Tropical Forest SoilMEPTDTNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIGGRHVLHLACGAGRETAALMSLGAL
Ga0126309_1084527213300010039Serpentine SoilMEPTEGNLRAWEEAHKKIRRSATRGTRTLPKPVRERLPDIAGRHVLHLASGAG
Ga0126312_1071899213300010041Serpentine SoilMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIGGRHLLHLACGAGR
Ga0126311_1082137613300010045Serpentine SoilMEPTDTNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIGGRHVLHLACGAGRETAALM
Ga0126382_1161846523300010047Tropical Forest SoilMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIGGRHVLHLACGAGRET
Ga0134067_1014506813300010321Grasslands SoilMEPTEGNLRAWEEAHRSLRRRGGQRGLPKPVRERLPDLAGRHVLHLSCGARRETA
Ga0126370_1083642723300010358Tropical Forest SoilMEPTDSNLRAWEEAHRSLRRGGGRRGLPKPVRERLPDLEGRHVL
Ga0126376_1068868733300010359Tropical Forest SoilMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIGGRHVLHLTCGAGRET
Ga0134128_1176039713300010373Terrestrial SoilMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIGGRHVLHLACGAGRETAA
Ga0134128_1291326313300010373Terrestrial SoilMEPTDTNLRAWEDAHRKLRRGGGRRGLPKPVRERLPDLDGRHVLHLTCGAGRETAALIGL
Ga0120139_109043313300012019PermafrostMEPTDTNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIGGRNVLHLAC
Ga0137377_1161947723300012211Vadose Zone SoilMEPTDTNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIAGRHVLHL
Ga0150985_11001318123300012212Avena Fatua RhizosphereMEPTDTNLRAWEDAHRKLRRGGGRRGLPKPVRERLPD
Ga0137386_1121905623300012351Vadose Zone SoilMEPTDSNLRAWEEAHRSLRRGGGRRGLPKPVRERLPDLE
Ga0137369_1054999223300012355Vadose Zone SoilMEPTEGNLRAWEEAHRSLRGGGGRRGLPKPVRERLPDLSGRHVLHLGCGAGR
Ga0137371_1024648413300012356Vadose Zone SoilMEPTEGNLRAWEEAHRSLRRRGGQRGLPKPVRERLPDLDGRHVLHLSCG
Ga0137371_1081260013300012356Vadose Zone SoilMEPTDTNLRAWEEAHRSLRRGGGRRGLPKPVRERLPDLDGRHVLHLSCGQGRETAA
Ga0157336_103965013300012477Arabidopsis RhizosphereMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERMPDIAG
Ga0157339_105475213300012505Arabidopsis RhizosphereMEPTDTNLRAWEEAHKRIRRSSTRGSRTLPKPVRE
Ga0157299_1015454523300012899SoilMEPTDSNLRAWEDAHKRIRRSSARGSRTLPKPVRERLPDIGGRHVLHLACGAGRETARIRGSG*
Ga0134110_1008923533300012975Grasslands SoilMEPTEGNLRAWEEAHRSLRRRGGQRGLPKPVRERLPDLD
Ga0164304_1060137213300012986SoilMEPTDTNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDI
Ga0164306_1195507113300012988SoilMEPTDTNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIGGRHVLHLACGAGRETAALMSLGA
Ga0164305_1090466313300012989SoilMEPTDSNLRAWEEAHKRIRRSSARGSRTLPKPVRERL
Ga0164305_1092718823300012989SoilMEPTDSNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIGGRHVLHLACG
Ga0120147_108888313300013758PermafrostMEPTEGNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIAGRHVLHLACGAGRETAALMGP
Ga0134078_1030070923300014157Grasslands SoilMEPTEGNLRAWEEAHRSLRRGGGRRGLPKPVRERLPDLDGRHVLHLTCGQGRETAALIG
Ga0134085_1048388213300015359Grasslands SoilMEPTDTNLRAWEEAHRSLRRGGGRRGLPKPVRERLPDLDGRHVLHLTCGAGRETAALIGLGA
Ga0187787_1038267413300018029Tropical PeatlandMEPTEGNLRAWEDAHRSLRRRGGRRGLPKPVRERLPELEGRHVLHLGSGAGRETAALIGLGALVT
Ga0184642_117419823300019279Groundwater SedimentMEPTDTNLRAWEEAHRSLRRGGGRRGLPKPVRERLPDLEGRHVLHLGCGAGRETA
Ga0193715_102256143300019878SoilMEPTDTNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIGGRHVLHL
Ga0193697_108608613300020005SoilMEPTDSNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIGGRHVLHLACGAGRETAALM
Ga0193733_112590123300020022SoilMEPTEGNLRAWEEAHRSLRRRGGQRGLPKPVRERLP
Ga0210382_1034131523300021080Groundwater SedimentMEPTDTNLRAWEDAHRSLRRGGGRRGLPKPVRERLPDLE
Ga0193699_1049438123300021363SoilMEPTDSNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIGGRHVLH
Ga0247797_100210343300023057SoilMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERL
Ga0247794_1000151463300024055SoilMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIGGRHL
Ga0247693_104664913300024181SoilMEPTDTNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIGGRHVLHLAC
Ga0247671_101512413300024284SoilMEPTDTNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIGG
Ga0247666_110485913300024323SoilMEPTDTNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIGGRHVLHLACGAG
Ga0210120_103677433300025556Natural And Restored WetlandsMEPTEGNLRAWEEAHRSLRRGGGRRGLPKPVRERL
Ga0207684_1044885533300025910Corn, Switchgrass And Miscanthus RhizosphereMEPTDSNLRAWEEAHRSLRRGGGQRGLPKPVRERLPDLEGRHVLHLGSGAGRETA
Ga0207649_1122014423300025920Corn RhizosphereMEPTDTNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDVGG
Ga0207687_1007781853300025927Miscanthus RhizosphereMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIAGRHVLHL
Ga0207687_1171900223300025927Miscanthus RhizosphereMEPTDSNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIGGRHVLHLACGAGRETAALM
Ga0207644_1064498413300025931Switchgrass RhizosphereMEPTDTNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIGGRHVL
Ga0207644_1166967013300025931Switchgrass RhizosphereMEPTDSNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIGGRHVLHLACGAGRETAALMSLG
Ga0207686_1176638023300025934Miscanthus RhizosphereMEPTDTNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIGGRHVLHLA
Ga0207669_1057316313300025937Miscanthus RhizosphereMEPTDSNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIGG
Ga0207689_1112387623300025942Miscanthus RhizosphereMEPTDSNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIGGRHVLHLACGAGRETAALMSLGALVT
Ga0207679_1174943213300025945Corn RhizosphereVEPTDTNLRAWEEAHKRIRRSSTRGSRTLPKPDSLV
Ga0207651_1007651913300025960Switchgrass RhizosphereVEPTDTNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDVGGRHLLHLACGAGRETAALMSLGAL
Ga0207651_1202951323300025960Switchgrass RhizosphereMEPTDSNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIG
Ga0207712_1007418553300025961Switchgrass RhizosphereMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIAGRHVLHLACGAGR
Ga0207668_1063057413300025972Switchgrass RhizosphereMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIAGRHVLHLACGAGRE
Ga0207668_1106541023300025972Switchgrass RhizosphereMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIGGRHLLHLACGAGRETAALMSLGA
Ga0207676_1043735733300026095Switchgrass RhizosphereMEPTDSNLRAWEEAHKRIRRSSARGSRTLPKPVRERIPDIGGRHVLHLACGAGRETAALMSLGAL
Ga0207591_10136513300026827SoilMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIGGRHLLH
Ga0207467_101178513300027036SoilMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPD
Ga0209074_1041394623300027787Agricultural SoilMEPTDTNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIGGRHVLHLASGAGRETAALMSLGAL
Ga0207428_1097974023300027907Populus RhizosphereMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERLP
Ga0247685_100500613300028065SoilMEPTDTNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIGGRHVLHLACGAGRETA
Ga0268265_1007876613300028380Switchgrass RhizosphereMEPTDSNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIGGRH
Ga0307291_111226413300028707SoilMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIAGRHVLHLA
Ga0307291_114102213300028707SoilMEPTDSNLRAWEDAHKRIRRSATRGSRTLPKQVRER
Ga0307307_1004474813300028718SoilMEPTDTNLRAWEEAHKRIRRSSTRGSRTLPKPVRER
Ga0307317_1011119823300028720SoilMEPTDSNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIGGRH
Ga0307316_1016785213300028755SoilMEPTDSNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIGGRHVLHLACGAG
Ga0307280_1034707023300028768SoilMEPTDSNLRAWEDAHRKLRRGGGRRGLPKPVRERLPDLDGRHVLHLTCGAGRETAALIGLGA
Ga0307306_1000526353300028782SoilMEPTDSNLRAWEDAHKRIRRSATRGSRTLPKQVRERLPDIGGRHVLHLA
Ga0307306_1001004413300028782SoilMEPTDSNLRAWEDAHRKLRRGGGRRGLPKPVRERLPDLDGRHVLHLTCGAGRETAAL
Ga0307299_1009419213300028793SoilMEPTEGNLRAWEEAHRSLRRRGGQRGLPKPVRERLPDLDGRHVLHLSCGAG
Ga0307284_1025965923300028799SoilMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIGGRHVLHLACGAGRETAAL
Ga0307294_1023645313300028810SoilMEPTDSNLRAWEDAHRKLRRGGGRRGLPKPVRERLPDLDGRHVLHLT
Ga0307278_1010627133300028878SoilMEPTDTNLRAWEEAHRSLRRGGGRRGLPKPVRERLPDLEGRHVLHL
Ga0307300_1011887823300028880SoilMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIAGRHVLHLACGAGRETAALMSLGALV
Ga0307304_1040938513300028885SoilMEPTDSNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIGGRHVLH
Ga0247826_1127944213300030336SoilMEPTDTNLRAWEEAHKRIRRSSARGSRTRPKPVRERLPDIAGRHVL
Ga0268241_1008657723300030511SoilMEPTEGNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIGGRHLLHLACGA
Ga0307499_1026006923300031184SoilMEPTEGNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIAGRHVLHLACGAG
Ga0307499_1028698613300031184SoilMEPTDSNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDI
Ga0307497_1035697113300031226SoilMEPTDSNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPD
Ga0310887_1025507333300031547SoilMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIGGRHLLHLACGAGRETA
Ga0310892_1015603943300031858SoilMEPTDTNLRAWEEAHKRIRRSSTRGSRTLPKPVRERLPDIG
Ga0307409_10199171813300031995RhizosphereMEPTEGNLRAWEEAHKRIRRSSARGSRTLPKPVRDRLPDIGGR
Ga0335084_1158102123300033004SoilMEPTEGNLRAWEEAHRSLRRRGGQRGLPKPVRERLPDLDGRHV
Ga0310810_1059089333300033412SoilMEPTDTNLRAWEDAHRKLRRGGGRRGLPKPVRERLPDLDGRHVLHLTCGAGRETAALIG
Ga0247829_1111709213300033550SoilMEPTDTNLRAWEEAHKRIRRSSARGSRTLPKPVRERLPDIAGRHVLHLACGAGRETAAL


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