NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F070065

Metagenome / Metatranscriptome Family F070065

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F070065
Family Type Metagenome / Metatranscriptome
Number of Sequences 123
Average Sequence Length 68 residues
Representative Sequence MTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK
Number of Associated Samples 109
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 58.54 %
% of genes near scaffold ends (potentially truncated) 34.96 %
% of genes from short scaffolds (< 2000 bps) 90.24 %
Associated GOLD sequencing projects 102
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (77.236 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(11.382 % of family members)
Environment Ontology (ENVO) Unclassified
(30.894 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(52.846 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 28.79%    β-sheet: 0.00%    Coil/Unstructured: 71.21%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF00239Resolvase 47.97
PF13408Zn_ribbon_recom 17.89
PF07508Recombinase 13.01
PF00078RVT_1 8.13
PF08241Methyltransf_11 0.81
PF07690MFS_1 0.81
PF02371Transposase_20 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 60.98
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 47.97
COG3547TransposaseMobilome: prophages, transposons [X] 0.81


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms77.24 %
UnclassifiedrootN/A22.76 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001305|C688J14111_10171701All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales669Open in IMG/M
3300001305|C688J14111_10244864All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales562Open in IMG/M
3300001686|C688J18823_11014440All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini526Open in IMG/M
3300001867|JGI12627J18819_10308781All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales637Open in IMG/M
3300001867|JGI12627J18819_10319469All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales626Open in IMG/M
3300002568|C688J35102_119084225All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales636Open in IMG/M
3300004156|Ga0062589_102090739All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini577Open in IMG/M
3300005160|Ga0066820_1013471All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini576Open in IMG/M
3300005166|Ga0066674_10331014All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales716Open in IMG/M
3300005293|Ga0065715_10826026All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales600Open in IMG/M
3300005327|Ga0070658_11391867All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini609Open in IMG/M
3300005331|Ga0070670_100133967All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini2140Open in IMG/M
3300005333|Ga0070677_10162493All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini1049Open in IMG/M
3300005334|Ga0068869_100114482All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini2056Open in IMG/M
3300005335|Ga0070666_10694980All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales746Open in IMG/M
3300005340|Ga0070689_100526581All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini1015Open in IMG/M
3300005340|Ga0070689_101446984All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales621Open in IMG/M
3300005341|Ga0070691_10079344All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini1604Open in IMG/M
3300005354|Ga0070675_100888225All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales816Open in IMG/M
3300005355|Ga0070671_100250214All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini1505Open in IMG/M
3300005365|Ga0070688_100368143All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1056Open in IMG/M
3300005434|Ga0070709_10233336All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini1317Open in IMG/M
3300005435|Ga0070714_100216729All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini1757Open in IMG/M
3300005436|Ga0070713_100705440All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria963Open in IMG/M
3300005438|Ga0070701_10023958All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2947Open in IMG/M
3300005438|Ga0070701_10721469All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales673Open in IMG/M
3300005444|Ga0070694_101014453All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales689Open in IMG/M
3300005456|Ga0070678_100748996All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales883Open in IMG/M
3300005456|Ga0070678_101672121All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria599Open in IMG/M
3300005457|Ga0070662_100787886All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales808Open in IMG/M
3300005546|Ga0070696_100990370All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales702Open in IMG/M
3300005564|Ga0070664_100270492All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini1530Open in IMG/M
3300005564|Ga0070664_100688960All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales951Open in IMG/M
3300005577|Ga0068857_101936990All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales577Open in IMG/M
3300005718|Ga0068866_11349732All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales519Open in IMG/M
3300005842|Ga0068858_100869994All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales881Open in IMG/M
3300006606|Ga0074062_10019861All Organisms → cellular organisms → Bacteria → Proteobacteria2204Open in IMG/M
3300006804|Ga0079221_11710635All Organisms → cellular organisms → Bacteria → Proteobacteria513Open in IMG/M
3300006806|Ga0079220_11931810All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria524Open in IMG/M
3300006954|Ga0079219_11465676All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales615Open in IMG/M
3300007076|Ga0075435_101673802All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria558Open in IMG/M
3300009098|Ga0105245_10534835All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1192Open in IMG/M
3300009101|Ga0105247_10309346Not Available1099Open in IMG/M
3300009156|Ga0111538_10431909Not Available1669Open in IMG/M
3300009176|Ga0105242_10354321Not Available1356Open in IMG/M
3300009176|Ga0105242_10892040All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria888Open in IMG/M
3300010036|Ga0126305_10059619All Organisms → cellular organisms → Bacteria → Proteobacteria2192Open in IMG/M
3300010036|Ga0126305_10109432Not Available1672Open in IMG/M
3300010038|Ga0126315_11051327Not Available548Open in IMG/M
3300010039|Ga0126309_10054428All Organisms → cellular organisms → Bacteria1925Open in IMG/M
3300010040|Ga0126308_10808403All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 192650Open in IMG/M
3300010041|Ga0126312_10224629All Organisms → cellular organisms → Bacteria1315Open in IMG/M
3300010042|Ga0126314_11243650All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria557Open in IMG/M
3300010044|Ga0126310_10783641All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300010044|Ga0126310_10920287All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium682Open in IMG/M
3300010044|Ga0126310_11444600Not Available562Open in IMG/M
3300010045|Ga0126311_11669062All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae537Open in IMG/M
3300010166|Ga0126306_11239829All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300010371|Ga0134125_10427461All Organisms → cellular organisms → Bacteria → Proteobacteria1469Open in IMG/M
3300010371|Ga0134125_11180473All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria837Open in IMG/M
3300010373|Ga0134128_10697858Not Available1127Open in IMG/M
3300010375|Ga0105239_10788619Not Available1088Open in IMG/M
3300010400|Ga0134122_10453257All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1148Open in IMG/M
3300010401|Ga0134121_10567417All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1056Open in IMG/M
3300011106|Ga0151489_1600602All Organisms → cellular organisms → Bacteria → Proteobacteria936Open in IMG/M
3300012469|Ga0150984_118626757All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium714Open in IMG/M
3300012961|Ga0164302_10172829Not Available1298Open in IMG/M
3300012984|Ga0164309_11922836Not Available507Open in IMG/M
3300012986|Ga0164304_11176127All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria618Open in IMG/M
3300012988|Ga0164306_10940537All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria707Open in IMG/M
3300013102|Ga0157371_10231723All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1327Open in IMG/M
3300013296|Ga0157374_12498518All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae544Open in IMG/M
3300014488|Ga0182001_10238252All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria694Open in IMG/M
3300014497|Ga0182008_10037370All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2429Open in IMG/M
3300014497|Ga0182008_10241183Not Available930Open in IMG/M
3300014968|Ga0157379_12658868All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae502Open in IMG/M
3300014969|Ga0157376_10397803All Organisms → cellular organisms → Bacteria1331Open in IMG/M
3300015200|Ga0173480_10036964Not Available2130Open in IMG/M
3300015261|Ga0182006_1308687Not Available520Open in IMG/M
3300015371|Ga0132258_10311328All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3877Open in IMG/M
3300015373|Ga0132257_100341462Not Available1808Open in IMG/M
3300015373|Ga0132257_101000416Not Available1052Open in IMG/M
3300015374|Ga0132255_103271042All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300017656|Ga0134112_10494014Not Available518Open in IMG/M
3300017792|Ga0163161_10895617All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae751Open in IMG/M
3300017928|Ga0187806_1013969All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2271Open in IMG/M
3300017933|Ga0187801_10361847All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300017965|Ga0190266_10087151All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1241Open in IMG/M
3300018466|Ga0190268_10058041Not Available1580Open in IMG/M
3300018468|Ga0066662_12875267Not Available511Open in IMG/M
3300018476|Ga0190274_10985393All Organisms → cellular organisms → Bacteria → Proteobacteria916Open in IMG/M
3300018481|Ga0190271_10364610All Organisms → cellular organisms → Bacteria1529Open in IMG/M
3300019361|Ga0173482_10134749All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria943Open in IMG/M
3300019362|Ga0173479_10531906All Organisms → cellular organisms → Bacteria → Proteobacteria600Open in IMG/M
3300019377|Ga0190264_10186318All Organisms → cellular organisms → Bacteria → Proteobacteria1124Open in IMG/M
3300019377|Ga0190264_11373259All Organisms → cellular organisms → Bacteria → Proteobacteria603Open in IMG/M
3300021445|Ga0182009_10092270Not Available1367Open in IMG/M
3300025899|Ga0207642_10060710Not Available1755Open in IMG/M
3300025901|Ga0207688_10056570Not Available2204Open in IMG/M
3300025903|Ga0207680_11236033All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300025906|Ga0207699_10043025All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2621Open in IMG/M
3300025916|Ga0207663_11607152All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae523Open in IMG/M
3300025927|Ga0207687_10739602All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria837Open in IMG/M
3300025932|Ga0207690_11586056Not Available547Open in IMG/M
3300025986|Ga0207658_11865535All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria548Open in IMG/M
3300026121|Ga0207683_10524834Not Available1094Open in IMG/M
3300027307|Ga0209327_1060923All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300027502|Ga0209622_1022931All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1097Open in IMG/M
3300028379|Ga0268266_12018397All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria550Open in IMG/M
3300028380|Ga0268265_11070428All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae799Open in IMG/M
3300028578|Ga0272482_10061210All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1012Open in IMG/M
3300028707|Ga0307291_1084806All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria782Open in IMG/M
3300031547|Ga0310887_10539523All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria707Open in IMG/M
3300031858|Ga0310892_10234602Not Available1123Open in IMG/M
3300031908|Ga0310900_10751471All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae785Open in IMG/M
3300031939|Ga0308174_10054530All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2714Open in IMG/M
3300032074|Ga0308173_10190349Not Available1695Open in IMG/M
3300032122|Ga0310895_10086359Not Available1247Open in IMG/M
3300032892|Ga0335081_11656551All Organisms → cellular organisms → Bacteria → Proteobacteria700Open in IMG/M
3300034026|Ga0334946_024196All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1001Open in IMG/M
3300034137|Ga0334943_014835Not Available1462Open in IMG/M
3300034377|Ga0334931_029329Not Available1178Open in IMG/M
3300034817|Ga0373948_0038435All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria993Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil11.38%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil9.76%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.32%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.88%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.06%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.06%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere4.06%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.25%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.25%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.25%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.25%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.44%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.44%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.44%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere2.44%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.44%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.63%
Sub-Biocrust SoilEnvironmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil1.63%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.63%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.63%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.81%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.81%
BiocrustEnvironmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.81%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.81%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.81%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001305Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300001867Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)EnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300005160Soil and rhizosphere microbial communities from Laval, Canada - mgLMBEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006606Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011106Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300014488Bulk soil microbial communities from Mexico - San Felipe (SF) metaGEnvironmentalOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015261Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017928Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027307Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027502Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028578Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0EnvironmentalOpen in IMG/M
3300028707Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300034026Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 42SMSEnvironmentalOpen in IMG/M
3300034137Biocrust microbial communities from Mojave Desert, California, United States - 39SMCEnvironmentalOpen in IMG/M
3300034377Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNSEnvironmentalOpen in IMG/M
3300034817Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J14111_1017170123300001305SoilMSRRDQQTPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK*
C688J14111_1024486413300001305SoilPLAEAPMTRRDQQTPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPKSGAPGETKKIRSK*
C688J18823_1101444013300001686SoilMTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGGTKKIRSK*
JGI12627J18819_1030878123300001867Forest SoilMRAEQLAEAPMARRDQQIPRLRVRASHETTRYSSRWLAEAFERLLPRVECRLAPPAERAIEPKRGASGRTKEIRSN*
JGI12627J18819_1031946913300001867Forest SoilMRAEQLTEAPMARRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPRVERRLAPPAELAIQPKRGASGRAKEIRSN*
C688J35102_11908422523300002568SoilMSRRDQQTPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLPQPAELSTEPKSSAPGGTKKVRSK*
Ga0062589_10209073923300004156SoilMSRRNQQTPPLRVRVSHEITRYSSRWLGEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK*
Ga0066820_101347113300005160SoilMTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK*
Ga0066674_1033101423300005166SoilMTRRDQQIPPLGVRASHETTRYSSQWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGGTKKIRSK*
Ga0065715_1082602613300005293Miscanthus RhizosphereRRDQQIPPLRVRVSHETTRDSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGDTKKIRSK*
Ga0070658_1139186713300005327Corn RhizosphereMTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQFGELSTEPKSGAPGEIKKIRSK*
Ga0070670_10013396723300005331Switchgrass RhizosphereVGPEVRAEPVAEAPMTRRDQQIPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLVQPAEPSTEPKNGAPGDTEKIRRK*
Ga0070677_1016249313300005333Miscanthus RhizosphereVLAEAPMSRRNQQTPPLRVRVSHEITRYSSRWLGEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK*
Ga0068869_10011448223300005334Miscanthus RhizosphereVRVSHEITRYSSRWLGEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK*
Ga0070666_1069498013300005335Switchgrass RhizosphereMTRRDQQIPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQSGELSTEPKNGAPGETEKIRRK*
Ga0070689_10052658113300005340Switchgrass RhizosphereIPPLRVRVSHETTRDSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGDTKKIRSK*
Ga0070689_10144698413300005340Switchgrass RhizosphereQTPPLRVRVSHEITRYSSRWLGEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK
Ga0070691_1007934423300005341Corn, Switchgrass And Miscanthus RhizosphereDQQIPPLRVRASHETTRYSSRWLAEAFEQLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK*
Ga0070675_10088822513300005354Miscanthus RhizosphereMTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQSGELSTEPKNGAPGETEKIRRK*
Ga0070671_10025021413300005355Switchgrass RhizosphereVGPEVRAEPVAEAPMTRRDQQIPPLRVRASHETTRYSSRWLAEAFEQLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK*
Ga0070688_10036814313300005365Switchgrass RhizosphereMTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGDTKKIRSK*
Ga0070709_1023333613300005434Corn, Switchgrass And Miscanthus RhizosphereGVGPEVRAEPVAEAPMTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK*
Ga0070714_10021672923300005435Agricultural SoilRAEPVAEAPMTRRDQQIPPLRVRASHETTRYSSRWLAEAFEQLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK*
Ga0070713_10070544023300005436Corn, Switchgrass And Miscanthus RhizosphereMTRRDQQIPPLRVRASHETTRYSSRWLAEAFEQLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK*
Ga0070701_1002395833300005438Corn, Switchgrass And Miscanthus RhizosphereMTRRDQQIPPLRVRVSHETTRDSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGGTKKIRSK*
Ga0070701_1072146913300005438Corn, Switchgrass And Miscanthus RhizosphereAELLAEAPMSRRNQQTPPLRVRVSHEITRYSSRWLGEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK*
Ga0070694_10101445323300005444Corn, Switchgrass And Miscanthus RhizosphereMTRRDQQIPPLRVRVSHETTRDSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGDTKKIRSK*
Ga0070678_10074899623300005456Miscanthus RhizosphereMTRRDQQIPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLVQPAEPSTEPKNGAPGDTEKIRRK*
Ga0070678_10167212123300005456Miscanthus RhizosphereMTRRDQQIPPLRVRASHETTRYSSRWLAEAFEQLLPQVERRLAQPAEPSTEPKSDAP
Ga0070662_10078788623300005457Corn RhizosphereMSRRNQQTPPLRVRVSHEITRYSSRWLGEAFERLLPQVERRLAQPGELSTEPNSGAPGEIKKIRSK*
Ga0070696_10099037013300005546Corn, Switchgrass And Miscanthus RhizosphereQIPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLVQPAEPSTEPKNGAPGDTEKIRRK
Ga0070664_10027049223300005564Corn RhizosphereELLAEAPMSRRNQQTPPLRVRVSHEITRYSSRWLGEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK*
Ga0070664_10068896023300005564Corn RhizosphereMTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLVQPAEPSTDPKYGEPGDTEKIRRK*
Ga0068857_10193699023300005577Corn RhizosphereMTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKGDAPGDTKKIRSK*
Ga0068866_1134973213300005718Miscanthus RhizosphereVGPEVRAEPVAEAPMTRRDQQIPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQSGELSTEPKNGAPGETEKIRRK*
Ga0068858_10086999413300005842Switchgrass RhizospherePMTRRDQQIPPLRVRASHETTRYSSRWLAEAFEQLLPQVERRLAQPAEPSTEPKSNAPGETKKIRSK*
Ga0074062_1001986113300006606SoilMTRRDQQIPPLRVRASHETTRHSSRWLAEAFEQLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK*
Ga0079221_1171063513300006804Agricultural SoilMSRRDQQTPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLVQPGELSTEPKSGAPGEVKKIRSK
Ga0079220_1193181013300006806Agricultural SoilQQIPPVRVRVSHETTRYSSRWLAEAFERLLPQVERRLAHPGEISTEPKGGAPGATKKIRSK*
Ga0079219_1146567623300006954Agricultural SoilMRRRDQQTPPLRVRVSHEATRYSSRWLAEAFERLLPQVERRLAPPGELSTEPKSGAPSAT
Ga0075435_10167380213300007076Populus RhizosphereMTRRDQQIPPLRVRVSHETTRDSSRWLAEAFERLLPQVERRLAQPAEPSTDPKSDAPGDTKKIRSK*
Ga0105245_1053483523300009098Miscanthus RhizosphereVRAEPVAEAPMTRRDQQIPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLVQPAEPSTEPKNGAPGDTEKIRRK*
Ga0105247_1030934623300009101Switchgrass RhizospherePVAEAPMTRRDQQIPPLRVRASHETTRYSSRWLAEAFEQLLPQVERRLAQPAEPSTEPKSNAPGETKKIRSK*
Ga0111538_1043190913300009156Populus RhizospherePPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKGDAPGDTKKIRSK*
Ga0105242_1035432123300009176Miscanthus RhizosphereVRAEPVAEAPMTRRDQQIPPLRVRVSHETTRDSSRWLAEAFERLLPQVERRLAQSGELSTEPKNGAPGETEKIRSK*
Ga0105242_1089204023300009176Miscanthus RhizosphereMTRRDQQIPPLRVRASHETTRYSSRWLAEAFEQLLPQVERRLAQPAEPSTEPKSDAPGGTKKIRSK*
Ga0126305_1005961923300010036Serpentine SoilMTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPRSGIPGETKKIRSK*
Ga0126305_1010943213300010036Serpentine SoilRDQQIPPLRVRVSHETTRYSSQWLAEAFERLLPQVERRLAQSGELSTEPKNGAPGETEKIRRK*
Ga0126315_1105132713300010038Serpentine SoilMTRRDQQIPPLRVRASHETTRYSSRWLVEAFERLLPQVERRLAQPAEPSTESKCNAPGDTKKIRSK*
Ga0126309_1005442813300010039Serpentine SoilMTRRDQQIPPLRVRVSHEGTRYSRRWLAEAFERLLPQVERRLVQPGELSIEPKSSAPGETKKIRRK*
Ga0126308_1080840323300010040Serpentine SoilMTRRDQQTPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPRSGIPGETKKIRSKGPANPAFAGAGES*
Ga0126312_1022462923300010041Serpentine SoilVRAEPVAEAPMTRRDQQIPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQSGELSTEPKNGAPGETEKIRRK*
Ga0126314_1124365023300010042Serpentine SoilLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQPGELSIAPRSGVPGETKQIRSK*
Ga0126310_1078364113300010044Serpentine SoilMTRRDQQTPPLRVRASHETTRYSSRWLAEAFERLLPRVERRLAQPGELSIALKSGAPGGTKKIRSK*
Ga0126310_1092028713300010044Serpentine SoilPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQPGELSIAPRSGVPGETKQIRSK*
Ga0126310_1144460023300010044Serpentine SoilMRVELLAEAPMSRRDQQTPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK*
Ga0126311_1166906213300010045Serpentine SoilMTRRDQQIPPLRVRVSHETTRYSSRWLAEAFERLLPQVARRLAQSGELSTEPKNGAPGETEKIRRK*
Ga0126306_1123982923300010166Serpentine SoilMTRRDQQTPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPKNGAPGETEKIRRK*
Ga0134125_1042746123300010371Terrestrial SoilMTRRDQQIPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLVQPAEPSTEPKNGAPGDTEKIR
Ga0134125_1118047323300010371Terrestrial SoilPVAEAPMTRRDQQIPPLRVRASYETTRYSSRWLAGAFERLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK*
Ga0134128_1069785823300010373Terrestrial SoilMSRRNQQTPPLRARVSHEITRYSSRWLGEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK*
Ga0105239_1078861913300010375Corn RhizosphereVGPEVRAEPVAEAPMTRRDQQIPPLRVRVSHETTRDSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGDTKKIRSK*
Ga0134122_1045325723300010400Terrestrial SoilVRAEPVAEAPMTRRDQQIPPLRVRVSHETTRDSSRWLAEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK*
Ga0134121_1056741723300010401Terrestrial SoilVRAEPVAEAPMTRRDQQIPPLRVRASHETTRYSSRWLAEAFEQLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK*
Ga0151489_160060213300011106SoilMTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGE
Ga0150984_11862675713300012469Avena Fatua RhizosphereMTRRDQQIPPLRVRGSHETTRYSSRWLAEAFERLLPQVGRRLAQSGELSTEPKNGAPGETEKIRRK*
Ga0164302_1017282923300012961SoilSRRNQQTPPLRVRVSHEITRYSSRWLGEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK*
Ga0164309_1192283613300012984SoilMTRRDQQIPPLRVRASHETTRHSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK*
Ga0164304_1117612723300012986SoilVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK*
Ga0164306_1094053713300012988SoilGPEVRAEPVAEAPMTRRDQQIPPLRVRASHETTRYSSRWLAEAFEQLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK*
Ga0157371_1023172323300013102Corn RhizosphereMTRRDQQIPPLRVRVSHETTRYSSRWLAEAFERLLPQVGRRLAQSGELSTEPKNGAPGETEKIRRK*
Ga0157374_1249851823300013296Miscanthus RhizosphereGVGPEVRAEPVAEAPMTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGGTKKIRSK*
Ga0182001_1023825213300014488SoilMSRRDQQTPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPKSSAPSATKKIRSK*
Ga0182008_1003737033300014497RhizosphereMSRRDQQTPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPKSSAPGEIKKIRSK*
Ga0182008_1024118323300014497RhizosphereMRRRDQQTPPLRVRVSHEATRYSSRWLAEAFERLLPQVERRLVQPGELSAEPKNGAPRTIKKIRSK*
Ga0157379_1265886823300014968Switchgrass RhizospherePVAEAPMTRRDQQIPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK*
Ga0157376_1039780323300014969Miscanthus RhizosphereMTRRDQQIPPLRVRASHETTRYSSRWLAEAFEQLLPQVERRLAQPAEPSTEPKSNAPGETKKIRSK*
Ga0173480_1003696423300015200SoilVRAEPVAEAPMTRRDQQIPPLRVRVSHETTRDSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGDTKKIRSK*
Ga0182006_130868713300015261RhizosphereMSRRDQQTPPLRVRVSHETTRYSSQWLAEAFERLLSQVERRLVRPGELSTEPKSGAPGEIKKIRSK*
Ga0132258_1031132823300015371Arabidopsis RhizosphereMTRRDQQIPPLRVRVSHETTRDSSRWLAEAFARLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK*
Ga0132257_10034146223300015373Arabidopsis RhizosphereMTRRDQQIPPLRVRVSHETTRDSSRWLAEAFARLLPQVERRLAQPAEPSTEPKSDAPGDTKKIRSK*
Ga0132257_10100041623300015373Arabidopsis RhizosphereMRRRDQQIPPLRVRVSHEATRYSSRWLAEAFERLLPQVERRLAQPGELSTEPKSGAPGATKKIRSK*
Ga0132255_10327104223300015374Arabidopsis RhizosphereMRVELLAEAPMSRRDQQTPPLRVRVSHETTRYSNRWLAEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK*
Ga0134112_1049401413300017656Grasslands SoilMSRRDQQTPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPKNGAPGETEKIRRK
Ga0163161_1089561713300017792Switchgrass RhizosphereMTRRDQQIPPLRVRASHETTRYSSRWLAEAFEQLLPQVERRLAQPAEPSTEPKSDAPGGTKKIRSK
Ga0187806_101396923300017928Freshwater SedimentMGAEQLAEAPMARRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPRVERRLAQPAEPAIEPKRGTSGRTKEIRSS
Ga0187801_1036184723300017933Freshwater SedimentMGAEQLAEAPMARRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPRVERRLAQPAEPAIEPKRGTSGTTKEIRSS
Ga0190266_1008715123300017965SoilMTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLPPGELSTEPKSGVPGATKKIRSK
Ga0190268_1005804113300018466SoilEVRAEPVAEAPMTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPRSDAPGDTKKIRSK
Ga0066662_1287526713300018468Grasslands SoilMSRRDQQTPPLRVRVNHETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPKSGAPGETKKIRSK
Ga0190274_1098539323300018476SoilMTRRDQQIPPLRVRVSHETTRYSSRWRAEAFERLLPQVERRLAQSGELSTEPKNGAPGETEKIRRK
Ga0190271_1036461023300018481SoilMTRRDQQTPPLRVRASHETTRYSSRWLAEAFERLLPPVERRLAQPVELSTEPRSGAPGGTKKIRSK
Ga0173482_1013474923300019361SoilMTRRDQQIPPLRVRASYETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK
Ga0173479_1053190623300019362SoilMTRRDQQIPPLRVRVSHETTRDSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGDTKKIRSK
Ga0190264_1018631823300019377SoilMTRRDQQTPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLPQPGELSTEPRSGAPGGTKKIRSK
Ga0190264_1137325923300019377SoilMTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPPVERRLAQPAELSIELKSGAPGGTKKIRSK
Ga0182009_1009227013300021445SoilLLAEAPMSRRDQQTPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPKSSAPGEIKKIRSK
Ga0207642_1006071023300025899Miscanthus RhizosphereMSRRNQQTPPLRVRVSHEITRYSSRWLGEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK
Ga0207688_1005657013300025901Corn, Switchgrass And Miscanthus RhizosphereMTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKGDAPGDTKKIRSK
Ga0207680_1123603313300025903Switchgrass RhizosphereMTRRDQQIPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQSGELSTEPKNGAPGETEKIRRK
Ga0207699_1004302533300025906Corn, Switchgrass And Miscanthus RhizosphereRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK
Ga0207663_1160715223300025916Corn, Switchgrass And Miscanthus RhizosphereDQQIPPLRVRASHETTRYSSQWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGGTKKIRSK
Ga0207687_1073960213300025927Miscanthus RhizosphereMTRRDQQIPPLRVRASHETTRYSSRWLGEAFERLLPQVERRLAQPAEPSTEPKSDAPGDTKKIRSK
Ga0207690_1158605613300025932Corn RhizosphereMTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQSGELSTEPKNGAPGETEKIRRK
Ga0207658_1186553513300025986Switchgrass RhizosphereVRVSHEITRYSSRWLGEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK
Ga0207683_1052483423300026121Miscanthus RhizosphereMTRRDQQIPPLRVRASYETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGDTKKIRSK
Ga0209327_106092313300027307Forest SoilMARRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPRVERRLAPPAELAIQPKRGASGRAKEIRSN
Ga0209622_102293123300027502Forest SoilMARRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPRVECRLAPPAERAIEPKRGASGRTKEIRSN
Ga0268266_1201839713300028379Switchgrass RhizosphereTPPLRVRVSHEITRYSSRWLGEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK
Ga0268265_1107042823300028380Switchgrass RhizosphereALTGRRGRCVGPEVRAELLAEAPMSRRNQQTPPLRVRVSHEITRYSSRWLGEAFERLLPQVERRLAQPGELSTEPKSGAPGEIKKIRSK
Ga0272482_1006121013300028578SoilMTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPRVERRLAQPAELSIELKSGAPGETKKIRSK
Ga0307291_108480613300028707SoilMIRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK
Ga0310887_1053952313300031547SoilAEPVAEAPMTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQSGELSTEPKNGAPGETEKIRRK
Ga0310892_1023460223300031858SoilCVGPEVRAEPVAEAPMTRRDQQIPPLRVRVSHETTRDSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGDTKKIRSK
Ga0310900_1075147123300031908SoilMTRRDQQISPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGDTKKIRSK
Ga0308174_1005453023300031939SoilMTRRDQQIPPLRVRVSHETTRYSSRWLAEAFERLLPQVGRRLAQSGELSTEPKNGAPGETEKIRRK
Ga0308173_1019034913300032074SoilMTRRDQQIPPLRVRVRHETTRYSSRWLAEAFERLLPQVGRRLAQSGELSTEPKNGAPGETEKIRRK
Ga0310895_1008635923300032122SoilMTRRDQQIPPLRVRVSHETTRDSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGETKKIRSK
Ga0335081_1165655113300032892SoilQLAEAPMARRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPRVERRLAQPAEPAIEPKRGTSGTTKEIRSS
Ga0334946_024196_308_5083300034026Sub-Biocrust SoilMTRRDQQIPPLRVRVSHETTRYSSRWLAEAFERLLPQVERRLAQPGELSTEPKSGAPGAIKKIRSK
Ga0334943_014835_1209_14093300034137BiocrustMSRRNQQTPPLRVRVSHETTRYSSRWLAEAFERLLPQMERRLAQPGELSTKPKSGAPGAIKKIRSK
Ga0334931_029329_84_2843300034377Sub-Biocrust SoilMSRRDQHTPPLRVRARHETTRYRSRWLAEAFERLLPQVERRLAQPGELSTKPKSGAPGEIKKIRSK
Ga0373948_0038435_293_4933300034817Rhizosphere SoilMTRRDQQIPPLRVRASHETTRYSSRWLAEAFERLLPQVERRLAQPAEPSTEPKSDAPGDTKKIRSK


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.