Metagenome Family F070057

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070057
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	93 residues
Representative Sequence	MLSFKNLELSAEQLSTARAAADRVFTAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWVPKPAQEGEK
Number of Associated Samples	45
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	65.04 %
% of genes near scaffold ends (potentially truncated)	26.02 %
% of genes from short scaffolds (< 2000 bps)	74.80 %
Associated GOLD sequencing projects	28
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (75.610 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment (45.529 % of family members)
Environment Ontology (ENVO)	Unclassified (46.341 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (46.341 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.50% β-sheet: 5.00% Coil/Unstructured: 52.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF08774	VRR_NUC	3.25
PF04002	RadC	3.25
PF09588	YqaJ	0.81
PF16510	P22_portal	0.81
PF11651	P22_CoatProtein	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG2003	DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif	Replication, recombination and repair [L]	3.25

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.61 %
All Organisms	root	All Organisms	24.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.61 %
Viruses	superkingdom	All Organisms → Viruses	17.07 %
cellular organisms	root	All Organisms → cellular organisms	7.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.61 %
Riboviria	clade	All Organisms → Viruses → Riboviria	9.76 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	6.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	6.50 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.61 %
Orthornavirae	kingdom	All Organisms → Viruses → Riboviria → Orthornavirae	9.76 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	6.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.69 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.61 %
Pisuviricota	phylum	All Organisms → Viruses → Riboviria → Orthornavirae → Pisuviricota	9.76 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	6.50 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.25 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.63 %
Methanomada group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group	0.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.61 %
Pisoniviricetes	class	All Organisms → Viruses → Riboviria → Orthornavirae → Pisuviricota → Pisoniviricetes	9.76 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	6.50 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.25 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.63 %
Methanobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria	0.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.61 %
Picornavirales	order	All Organisms → Viruses → Riboviria → Orthornavirae → Pisuviricota → Pisoniviricetes → Picornavirales	9.76 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	6.50 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	1.63 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.81 %
Methanobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales	0.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.61 %
unclassified Picornavirales	no rank	All Organisms → Viruses → Riboviria → Orthornavirae → Pisuviricota → Pisoniviricetes → Picornavirales → unclassified Picornavirales	9.76 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6.50 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	1.63 %
Methanobacteriaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae	0.81 %
Comamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas	0.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.61 %
Picornavirales sp.	species	All Organisms → Viruses → Riboviria → Orthornavirae → Pisuviricota → Pisoniviricetes → Picornavirales → unclassified Picornavirales → Picornavirales sp.	9.76 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6.50 %
Lysobacter enzymogenes	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter enzymogenes	1.63 %
Comamonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas → Comamonas koreensis	0.81 %
Methanobrevibacter	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter	0.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.61 %
Picornavirales sp.	species	All Organisms → Viruses → Riboviria → Orthornavirae → Pisuviricota → Pisoniviricetes → Picornavirales → unclassified Picornavirales → Picornavirales sp.	9.76 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6.50 %
Lysobacter enzymogenes	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter enzymogenes	1.63 %
unclassified Methanobrevibacter	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter	0.81 %
Comamonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas → Comamonas koreensis	0.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.61 %
Picornavirales sp.	species	All Organisms → Viruses → Riboviria → Orthornavirae → Pisuviricota → Pisoniviricetes → Picornavirales → unclassified Picornavirales → Picornavirales sp.	9.76 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6.50 %
Lysobacter enzymogenes	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter enzymogenes	1.63 %
Methanobrevibacter sp.	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	0.81 %
Comamonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas → Comamonas koreensis	0.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005805\|Ga0079957_1346771	Not Available	652	Open in IMG/M
3300006637\|Ga0075461_10011699	All Organisms → cellular organisms → Bacteria → Proteobacteria	2895	Open in IMG/M
3300006802\|Ga0070749_10042320	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2798	Open in IMG/M
3300006802\|Ga0070749_10072022	Not Available	2071	Open in IMG/M
3300006802\|Ga0070749_10125542	Not Available	1505	Open in IMG/M
3300006802\|Ga0070749_10239336	Not Available	1031	Open in IMG/M
3300006802\|Ga0070749_10485136	Not Available	674	Open in IMG/M
3300006916\|Ga0070750_10348662	Not Available	625	Open in IMG/M
3300007234\|Ga0075460_10230343	Not Available	623	Open in IMG/M
3300007344\|Ga0070745_1120059	Not Available	1013	Open in IMG/M
3300007538\|Ga0099851_1030924	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2141	Open in IMG/M
3300007538\|Ga0099851_1077242	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1284	Open in IMG/M
3300007538\|Ga0099851_1212076	Not Available	702	Open in IMG/M
3300007538\|Ga0099851_1286981	Not Available	583	Open in IMG/M
3300007538\|Ga0099851_1330610	Not Available	534	Open in IMG/M
3300007541\|Ga0099848_1013435	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3580	Open in IMG/M
3300007541\|Ga0099848_1021768	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2728	Open in IMG/M
3300007541\|Ga0099848_1039296	Not Available	1942	Open in IMG/M
3300007541\|Ga0099848_1045440	Not Available	1785	Open in IMG/M
3300007541\|Ga0099848_1105800	Not Available	1075	Open in IMG/M
3300007541\|Ga0099848_1140606	All Organisms → Viruses → Riboviria → Orthornavirae → Pisuviricota → Pisoniviricetes → Picornavirales → unclassified Picornavirales → Picornavirales sp.	899	Open in IMG/M
3300007541\|Ga0099848_1179883	Not Available	768	Open in IMG/M
3300007541\|Ga0099848_1181438	Not Available	764	Open in IMG/M
3300007541\|Ga0099848_1217846	Not Available	679	Open in IMG/M
3300007541\|Ga0099848_1262383	All Organisms → Viruses → Riboviria → Orthornavirae → Pisuviricota → Pisoniviricetes → Picornavirales → unclassified Picornavirales → Picornavirales sp.	601	Open in IMG/M
3300007541\|Ga0099848_1319075	Not Available	530	Open in IMG/M
3300007542\|Ga0099846_1094887	Not Available	1102	Open in IMG/M
3300007542\|Ga0099846_1195158	Not Available	716	Open in IMG/M
3300007542\|Ga0099846_1340363	Not Available	509	Open in IMG/M
3300007960\|Ga0099850_1177204	All Organisms → Viruses → Riboviria → Orthornavirae → Pisuviricota → Pisoniviricetes → Picornavirales → unclassified Picornavirales → Picornavirales sp.	847	Open in IMG/M
3300009009\|Ga0105105_10032832	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2258	Open in IMG/M
3300009009\|Ga0105105_10183703	Not Available	1075	Open in IMG/M
3300009075\|Ga0105090_10006958	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6630	Open in IMG/M
3300009075\|Ga0105090_10043829	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	2792	Open in IMG/M
3300009075\|Ga0105090_10167095	Not Available	1369	Open in IMG/M
3300009075\|Ga0105090_10427967	All Organisms → Viruses → Riboviria → Orthornavirae → Pisuviricota → Pisoniviricetes → Picornavirales → unclassified Picornavirales → Picornavirales sp.	806	Open in IMG/M
3300009081\|Ga0105098_10022325	Not Available	2431	Open in IMG/M
3300009081\|Ga0105098_10164443	Not Available	1005	Open in IMG/M
3300009081\|Ga0105098_10254276	Not Available	829	Open in IMG/M
3300009081\|Ga0105098_10324432	Not Available	746	Open in IMG/M
3300009081\|Ga0105098_10385404	Not Available	692	Open in IMG/M
3300009081\|Ga0105098_10538635	Not Available	600	Open in IMG/M
3300009081\|Ga0105098_10644202	Not Available	557	Open in IMG/M
3300009085\|Ga0105103_10038161	All Organisms → Viruses → Riboviria → Orthornavirae → Pisuviricota → Pisoniviricetes → Picornavirales → unclassified Picornavirales → Picornavirales sp.	2404	Open in IMG/M
3300009085\|Ga0105103_10068193	Not Available	1814	Open in IMG/M
3300009085\|Ga0105103_10202573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1062	Open in IMG/M
3300009085\|Ga0105103_10236698	Not Available	984	Open in IMG/M
3300009085\|Ga0105103_10367162	Not Available	793	Open in IMG/M
3300009146\|Ga0105091_10450768	Not Available	647	Open in IMG/M
3300009146\|Ga0105091_10678545	Not Available	538	Open in IMG/M
3300009157\|Ga0105092_10934813	Not Available	513	Open in IMG/M
3300009165\|Ga0105102_10046767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter enzymogenes	1887	Open in IMG/M
3300009165\|Ga0105102_10132412	All Organisms → Viruses → Riboviria → Orthornavirae → Pisuviricota → Pisoniviricetes → Picornavirales → unclassified Picornavirales → Picornavirales sp.	1200	Open in IMG/M
3300009165\|Ga0105102_10181152	Not Available	1044	Open in IMG/M
3300009165\|Ga0105102_10586207	Not Available	615	Open in IMG/M
3300009168\|Ga0105104_10208677	All Organisms → Viruses → Predicted Viral	1062	Open in IMG/M
3300009168\|Ga0105104_10313739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	863	Open in IMG/M
3300009168\|Ga0105104_10494420	All Organisms → Viruses → Riboviria → Orthornavirae → Pisuviricota → Pisoniviricetes → Picornavirales → unclassified Picornavirales → Picornavirales sp.	688	Open in IMG/M
3300009168\|Ga0105104_10733989	Not Available	570	Open in IMG/M
3300009168\|Ga0105104_10925747	Not Available	512	Open in IMG/M
3300009169\|Ga0105097_10015807	Not Available	3947	Open in IMG/M
3300009169\|Ga0105097_10037668	Not Available	2594	Open in IMG/M
3300009169\|Ga0105097_10140388	Not Available	1328	Open in IMG/M
3300009169\|Ga0105097_10871446	Not Available	516	Open in IMG/M
3300009169\|Ga0105097_10931987	Not Available	500	Open in IMG/M
3300009170\|Ga0105096_10349847	All Organisms → Viruses → Riboviria → Orthornavirae → Pisuviricota → Pisoniviricetes → Picornavirales → unclassified Picornavirales → Picornavirales sp.	758	Open in IMG/M
3300010299\|Ga0129342_1335514	Not Available	516	Open in IMG/M
3300010354\|Ga0129333_10509966	Not Available	1053	Open in IMG/M
3300010354\|Ga0129333_10887498	Not Available	755	Open in IMG/M
3300010354\|Ga0129333_11413053	Not Available	572	Open in IMG/M
3300010354\|Ga0129333_11495915	Not Available	553	Open in IMG/M
3300010354\|Ga0129333_11726466	Not Available	509	Open in IMG/M
3300010370\|Ga0129336_10599995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas → Comamonas koreensis	588	Open in IMG/M
3300022063\|Ga0212029_1028886	All Organisms → Viruses → Riboviria → Orthornavirae → Pisuviricota → Pisoniviricetes → Picornavirales → unclassified Picornavirales → Picornavirales sp.	772	Open in IMG/M
3300022063\|Ga0212029_1033378	Not Available	726	Open in IMG/M
3300022176\|Ga0212031_1085344	Not Available	539	Open in IMG/M
3300022176\|Ga0212031_1090602	Not Available	522	Open in IMG/M
3300022198\|Ga0196905_1053774	All Organisms → Viruses → Riboviria → Orthornavirae → Pisuviricota → Pisoniviricetes → Picornavirales → unclassified Picornavirales → Picornavirales sp.	1140	Open in IMG/M
3300022198\|Ga0196905_1195788	Not Available	508	Open in IMG/M
3300022200\|Ga0196901_1020590	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2662	Open in IMG/M
3300022200\|Ga0196901_1100659	Not Available	1008	Open in IMG/M
3300022200\|Ga0196901_1163734	Not Available	733	Open in IMG/M
3300025630\|Ga0208004_1010631	Not Available	3094	Open in IMG/M
3300025646\|Ga0208161_1034266	All Organisms → Viruses → Riboviria → Orthornavirae → Pisuviricota → Pisoniviricetes → Picornavirales → unclassified Picornavirales → Picornavirales sp.	1757	Open in IMG/M
3300025646\|Ga0208161_1058780	Not Available	1192	Open in IMG/M
3300025646\|Ga0208161_1081088	Not Available	938	Open in IMG/M
3300025646\|Ga0208161_1127893	Not Available	662	Open in IMG/M
3300025647\|Ga0208160_1128185	Not Available	635	Open in IMG/M
3300025655\|Ga0208795_1139892	Not Available	614	Open in IMG/M
3300025687\|Ga0208019_1028584	Not Available	2101	Open in IMG/M
3300025889\|Ga0208644_1020986	Not Available	4115	Open in IMG/M
3300025889\|Ga0208644_1042549	Not Available	2593	Open in IMG/M
3300025889\|Ga0208644_1353562	Not Available	559	Open in IMG/M
3300025889\|Ga0208644_1399497	Not Available	506	Open in IMG/M
3300027683\|Ga0209392_1000341	Not Available	10521	Open in IMG/M
3300027683\|Ga0209392_1000695	Not Available	8124	Open in IMG/M
3300027683\|Ga0209392_1007732	Not Available	3203	Open in IMG/M
3300027693\|Ga0209704_1002207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter enzymogenes	4076	Open in IMG/M
3300027693\|Ga0209704_1037961	All Organisms → Viruses → Riboviria → Orthornavirae → Pisuviricota → Pisoniviricetes → Picornavirales → unclassified Picornavirales → Picornavirales sp.	1294	Open in IMG/M
3300027693\|Ga0209704_1091895	Not Available	858	Open in IMG/M
3300027693\|Ga0209704_1154191	Not Available	665	Open in IMG/M
3300027721\|Ga0209492_1000503	Not Available	12192	Open in IMG/M
3300027721\|Ga0209492_1041616	Not Available	1614	Open in IMG/M
3300027743\|Ga0209593_10027762	Not Available	2254	Open in IMG/M
3300027743\|Ga0209593_10310956	Not Available	540	Open in IMG/M
3300027762\|Ga0209288_10001713	All Organisms → cellular organisms → Bacteria	6530	Open in IMG/M
3300027762\|Ga0209288_10299754	Not Available	535	Open in IMG/M
3300027956\|Ga0209820_1004647	Not Available	3331	Open in IMG/M
3300027956\|Ga0209820_1023323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1588	Open in IMG/M
3300027956\|Ga0209820_1058970	Not Available	1021	Open in IMG/M
3300027956\|Ga0209820_1089991	Not Available	830	Open in IMG/M
3300027956\|Ga0209820_1113165	Not Available	741	Open in IMG/M
3300027975\|Ga0209391_10367566	Not Available	557	Open in IMG/M
3300027975\|Ga0209391_10426113	Not Available	505	Open in IMG/M
3300032258\|Ga0316191_10005640	Not Available	9399	Open in IMG/M
3300032263\|Ga0316195_10040165	Not Available	2409	Open in IMG/M
3300032263\|Ga0316195_10041017	Not Available	2385	Open in IMG/M
3300033997\|Ga0310131_049485	Not Available	982	Open in IMG/M
3300033997\|Ga0310131_067867	Not Available	725	Open in IMG/M
3300034072\|Ga0310127_000812	Not Available	39931	Open in IMG/M
3300034072\|Ga0310127_050064	Not Available	2098	Open in IMG/M
3300034072\|Ga0310127_251460	Not Available	627	Open in IMG/M
3300034073\|Ga0310130_0230769	Not Available	580	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	95.12%
Terrestrial	Environmental → Terrestrial	4.88%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	48.78%
Freshwater	Environmental → Aquatic → Freshwater	46.34%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	4.88%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	48.78%
Sediment	Environmental → Aquatic → Freshwater → Sediment	45.53%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	4.88%
Lake	Environmental → Aquatic → Freshwater → Lake	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	46.34%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	45.53%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	4.88%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	2.44%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	45.53%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	40.65%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	5.69%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	4.88%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Sediment	1.63%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.81%
Worm Burrow	Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300007234	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007541	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG	Environmental	Open in IMG/M
3300007542	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG	Environmental	Open in IMG/M
3300007960	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009170	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300010299	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNA	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300022063	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2)	Environmental	Open in IMG/M
3300022176	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v2)	Environmental	Open in IMG/M
3300022198	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300025630	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025646	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025647	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025655	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025687	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300027683	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027693	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027721	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027762	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027956	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027975	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300032258	Coastal sediment microbial communities from Maine, United States - Eddy worm burrow 2 cm	Environmental	Open in IMG/M
3300032263	Coastal sediment microbial communities from Maine, United States - Phippsburg sediment 1	Environmental	Open in IMG/M
3300033997	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-FT7-sol	Environmental	Open in IMG/M
3300034072	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-3-A	Environmental	Open in IMG/M
3300034073	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XL	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0079957_13467712	3300005805	Lake	MLSFKNIELSAEQLSAARAAADAVFRAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWTPAQEGEK*
Ga0075461_100116992	3300006637	Aqueous	MLSFKNIELSADQLSAARAAANAVFRAADLEPAQCWKHVVSMTAGGLFSRRAVAVWHDAEDKAVRAALGSWRHAPLNAMMDWTEAKQEAEK*
Ga0070749_100423202	3300006802	Aqueous	MLTFKNLELTPDQLSIARAAADAVFAAADLEPAQCWKHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWAPKPAQEGEK*
Ga0070749_100720221	3300006802	Aqueous	QLSTARAAADAVFTAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWVPETKQEGEK*
Ga0070749_101255421	3300006802	Aqueous	VLSFKNLELSEAQLSTARAAADRVFAAADLEPAQCWKHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNVMMDWTEAQEAEK*
Ga0070749_102393362	3300006802	Aqueous	MMLSFKNLELTAEQLSTARAAADAVFRAADLEPAQCWKHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWTPEAPKPAQEAEK*
Ga0070749_104851362	3300006802	Aqueous	MITFKNIELTADQLSTARAAADRVFTAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWAPPQVPQAPAQAPK
Ga0070750_103486621	3300006916	Aqueous	MMLSFKNLELTAEQLSAARAAADRVFAAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWTPPQVPQAPKPAQE
Ga0075460_102303432	3300007234	Aqueous	MITFKNIELSAEQLSTARAAADAVFTAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWAPAQEGEK*
Ga0070745_11200592	3300007344	Aqueous	MITFKNLELSADQLFTARAAADRVFSAADLEPAQCWRHVVSMMVGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWTPETKQEGEK*
Ga0099851_10309247	3300007538	Aqueous	MLSFKNLELSAEQLSTARAAADRVFTAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWVPKPAQEGEK*
Ga0099851_10772423	3300007538	Aqueous	MLSFKNLELTSDQLAAARAAADRVFAAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWAPPQAPKPAQGGEK*
Ga0099851_12120762	3300007538	Aqueous	VMLSFKNLELSEAQLSTARAAADRVFAAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRRAPLNATMDWVPAQEGEK*
Ga0099851_12869811	3300007538	Aqueous	MMLSFKNLELSEAQLSAARAAADAVFRAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWLPPQAPKPAQEAEK*
Ga0099851_13306102	3300007538	Aqueous	MLTFKNIELSEAQLSTARAAADAVFIAAGLEPAQCWRHVVSMMTGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWTPEAKQEGEK*
Ga0099848_101343512	3300007541	Aqueous	MMLSFKNIELSAEQLSTARAAADRVFTAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRKAPLNATMDWVPAQEAEK*
Ga0099848_10217687	3300007541	Aqueous	MLTFKNIELSEAQLSTARAAADAVFTAAGLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWAPKPAQEGEK*
Ga0099848_10392961	3300007541	Aqueous	MLSFKNIELSEAQLSTARAAADAVFTAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNATMDWAPKPAQEGEK*
Ga0099848_10454402	3300007541	Aqueous	MLSFKNLDLTSDQLAAARAAADRVFAAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWAPPQAPKPAQEAAE*
Ga0099848_11058004	3300007541	Aqueous	MLSFKNIELSPDQLSTARAAADRVFTAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWAP
Ga0099848_11406061	3300007541	Aqueous	MMLSFKNLELSEAQLSTARAAANRVFAAADLEPEQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWTPAQEAEK*
Ga0099848_11798831	3300007541	Aqueous	MLSFKNLELSEAQLSTARAAADRVFAAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRNAPLNAVMDWTPETKQEGEK*
Ga0099848_11814382	3300007541	Aqueous	MLSFKNLELSEAQLCTARAAADRVFAAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWAPKPAQEGEK*
Ga0099848_12178462	3300007541	Aqueous	MLSFKNLELSEAQLSAARAAADAVFHAADLEPAQCWKHVVSMMSGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWT
Ga0099848_12623832	3300007541	Aqueous	MLSFKNIELSEAQLSTARAAADRVFTAADLEPAQCWRHVVSMMTGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNATMDWAPAQEGEK*
Ga0099848_13190751	3300007541	Aqueous	AQLSTARAAADAVFTAAGLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNATMDWAPKPAQEGEK*
Ga0099846_10948872	3300007542	Aqueous	MLSFKNIELSEAQLSTARAAADAVFTAAGLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWTPEAKQEGEK*
Ga0099846_11951582	3300007542	Aqueous	MLTFKNIELSEAQLSTARAAADRVFTAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWTPEAKQEGEK*
Ga0099846_13403632	3300007542	Aqueous	MLSFKNIELSPDQLSTARAAADRVFTAADLEPAQCWKHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMM
Ga0099850_11772042	3300007960	Aqueous	MITFKNIELSADQLSTARAAADAVFRAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDRAVRAALGSWRHAPLNAMMDWAPKPAQEAEK*
Ga0105105_100328326	3300009009	Freshwater Sediment	MLTFKNLELSPDQLSTARAAADRVFRAADLEPDQCWRHVVSMMAGGLFSRRPVAVWHDAEDRAVRAALGSWRHAPLNAMMDWTPETPPQAPKTPQE
Ga0105105_101837032	3300009009	Freshwater Sediment	MLTFKNLELTPDQLNIARAAANRVFRAADLEPEQCWRHVSSMMAGGLFNHRAVTIWHDAEDKAVRSAIGSWRNAPLNAMMDWVPQAPKPAQEAEK*
Ga0105090_100069583	3300009075	Freshwater Sediment	MLTFKNLELSPDQLEVARAAADRVFRAADLEPEQCWRHVVSLMAGGLFNRRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWAPAQEAEK*
Ga0105090_100438292	3300009075	Freshwater Sediment	MLTFKNLELTTDQLEVARAAADRVFAAADLEPEQCWRHVVSLMAGGLFNRRAVTIWHDAEDKAVRSAIGSWRNAPLNAMMDWEPDAKQEAEK*
Ga0105090_101670952	3300009075	Freshwater Sediment	TFYRRIQRLARQPERRMMPLAFKNLELSPDQLEVARAAADRVFAAADLEPEQCWRHVSSLMAGGLFNRRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWVPQAPKPAQEAEK*
Ga0105090_104279672	3300009075	Freshwater Sediment	MEAVMLSFKNLELSPDQLEVARAAADRVFAAADLEPEQCWRHVSSLMAGGLFNRRAVTIWHDAEDKAVRSAIGSWRNAPLNAMMDWTPDAKQEAEK*
Ga0105098_100223256	3300009081	Freshwater Sediment	MMLTFKNLELTPDQLEVARAAANRVFRAADLEPEQCWRHVSSMMAGGLFNHRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWVPEAKQEADK*
Ga0105098_101644432	3300009081	Freshwater Sediment	MITFKNLELTPDQLNIARAAANRVFRAADLEPEQCWRHVSSMMAGGLFNHRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWVPDAKQEDEK*
Ga0105098_102542761	3300009081	Freshwater Sediment	MLTFKNLELTPDQLEIARAAADRVFRAADLEPEQCWRHVSSLMAGGLFNRRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWVPDAKQEAEK*
Ga0105098_103244322	3300009081	Freshwater Sediment	MLTFKNLELSPDQLNIARAAANRVFRAADLEPEQCWRHVSSMMAGGLFNHRAVTIWHDAEDKAVRSAIGSWRNAPLNAMMDWAPQAP
Ga0105098_103854042	3300009081	Freshwater Sediment	MEAVMLSFKNLELSADQLSTARAAADRVFAAADLEPEQCWRHVSSLMAGGLFNRRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWVPDAKQEAEK*
Ga0105098_105386352	3300009081	Freshwater Sediment	MLTFKNLELSPDQLEVARAAANRVFRAADLEPGQCWRHVVSLMAGGLFNRRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWVPDAKQEAEK*
Ga0105098_106442021	3300009081	Freshwater Sediment	VLSFKNLELSPDQLEVARAAAERVFRAADLEPEQCWRHVSSLMAGGLFNRRAVTIWHDAEDKAVRAAIGSWQNAPLNAMMDWEPDAKQEAEK*
Ga0105103_100381615	3300009085	Freshwater Sediment	VLSFKNLELSPDQLEVARAAAERVFRAADLEPEQCWRHVSSLMAGGLFNRRAVTIWHDAEDKAVRAAMGSWRNAPLNAMMDWVPDAKQEAAQ*
Ga0105103_100681932	3300009085	Freshwater Sediment	MITFKNLELTPDQLNIARAAANRVFRAADLEPEQCWRHVSSMMAGGLFNHRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWAPDAKQEAAQ*
Ga0105103_102025732	3300009085	Freshwater Sediment	MMPLAFKNLELSPDQLEVARAAADRVFTAADLEPEQCWRHVSSLMAGGLFNRRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWVPDAKQEAEK*
Ga0105103_102366983	3300009085	Freshwater Sediment	MLTFKNLELTPDQLEVARAAADRVFRAADLEPEQCWRHVVSLMAGGLFNRRAVTIWHDAEDKAVRSAIGSWRNAPLNAMMDWVPDTKQEAEK*
Ga0105103_103671623	3300009085	Freshwater Sediment	MLTFKNLELSPDQLEVARAAADRVFRAADLEPEQCWRHVVSLMAGGLFNRRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWEPAQAPKPAQEAEK*
Ga0105091_104507682	3300009146	Freshwater Sediment	VLSFKNLELTHDQLEVARAAADRVFTAADLEPEQCWRHVSSLMADGLFNRRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWAPDAKQEAAQ*
Ga0105091_106785452	3300009146	Freshwater Sediment	LSFKNLELSPDQLEVARAAAERVFRAADLEPEQCWRHVSSLMAGGLFNRRAVTIWHDAEDKAVRAAIGSWQNAPLNAMMDWEPDAKQEAEK*
Ga0105092_109348132	3300009157	Freshwater Sediment	VLTFKNLELSPDQLEIARAAADRVFTAADLEPEQCWRHVSSLMAGGLFNRRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWVPDAKQEAEK*
Ga0105102_100467672	3300009165	Freshwater Sediment	VLTFKNLELTHDQLEVARAAADRVFRAADLEPDQCWRHVSSLMAGGLFNRRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWAPQAPKPAQEADK*
Ga0105102_101324122	3300009165	Freshwater Sediment	MEAVMLSFKNLELSADQLSTARAAADRVFAAADLEPEQCWRHVSSLMAGGLFNRRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWVPDAKKEAEK*
Ga0105102_101811522	3300009165	Freshwater Sediment	MLTFKNLELTPDQLNIARAAANRVFAAADLEPEQCWRHVVSLMAGGLFNRRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWVPDAKQEAEK*
Ga0105102_105862072	3300009165	Freshwater Sediment	MITFKNLELTPDQLEVARAAANRVFRAADLEPEQCWRHVASMMAGGLFNHRAVTIWHDAEDKAVRAAIGSWRNAPLNA
Ga0105104_102086773	3300009168	Freshwater Sediment	MMPLAFKNLELSPDQLEVARAAADRVFTAADLEPEQCWRHVSSLMAGGLFNRRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWE
Ga0105104_103137393	3300009168	Freshwater Sediment	EVARAAADRVFTAADLEPEQCWRHVSSLMAGGLFNRRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWVPDAKQEAEK*
Ga0105104_104944202	3300009168	Freshwater Sediment	MEAVMLTFKNLELTPDQLEVARAAANRVFTAADLEPEQCWRHVSSLMAGGLFNRRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWVPDAKQEAEK*
Ga0105104_107339892	3300009168	Freshwater Sediment	MEAVMLSFKNLELSPDQLEVARAAADRVFAAADLEPEQCWRHVSSLMAGGLFNRRAVTIWHDAEDKAVRSAIGSWRNAPLNAMMDWAPDAKQEAEK*
Ga0105104_109257471	3300009168	Freshwater Sediment	RPSFAGKLGYFYRPGVSMMLTFKNLELTPDQLEVARAAANRVFRAADLEPEQCWRHVSSMMAGGLFNHRAATIWHDAEDKAVRAAIGSWRNAPLNAMMDWVPDAKQEAAQ*
Ga0105097_100158072	3300009169	Freshwater Sediment	MSPIESSKDGDRMMLTFKNLELTTDQLEVARAAANRVFTAADLEPEQCWRHVVSLMAGGLFNRRAVAIWHDAEDKAVRAAIGSWRNAPLNAMMDWVPDTKQEAEK*
Ga0105097_100376687	3300009169	Freshwater Sediment	MLSFKNIELTPDQLEVARAAADRVFTAADLEPEQCWRHVSSLMAGGLFNRRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWVPAQEAEK*
Ga0105097_101403882	3300009169	Freshwater Sediment	MLTFKNLELTPDQLEVARAAANRVFRAADLEPEQCWRHVSSLMAGGLFNRRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWTPDVKQEAEK*
Ga0105097_108714461	3300009169	Freshwater Sediment	MMLTFKNLELSPDQLEVARAAANRVFAAADLEPEQCWRHVSSLMAGGLFNRRAVTIWHDAEDQAVRAAIGSWRNAPLNAMMDWTPDAKQEAEK*
Ga0105097_109319871	3300009169	Freshwater Sediment	LELSADQLEVARAAADRVFRAADLEPEQCWRHVSSLMAGGLFNRRAVTIWHDAEDKAVRSAIGSWRNAPLNAMMDWTPDAKQEAEK*
Ga0105096_103498472	3300009170	Freshwater Sediment	MEAVMLSFKNLELSPDQLEVARAAADRVFTAADLEPEQCWRHVSSMMAGGLFNHRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWVPQAPKPAQEAEK*
Ga0129342_13355141	3300010299	Freshwater To Marine Saline Gradient	RSAADRVFAAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWVPAQEGEK*
Ga0129333_105099661	3300010354	Freshwater To Marine Saline Gradient	MLSFKNLELSPDQLSAARAAANAVFRAADLEPAQCWRHVVSMMAGGLFNRRALTIWHDAEDKAVRAALGSWRHAPLNAMMDWTEAKQEAEK*
Ga0129333_108874981	3300010354	Freshwater To Marine Saline Gradient	MEAVMLSFKNLELSPDQLSTARAAADRVFAAADLDPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWTPEAKQEGEK*
Ga0129333_114130531	3300010354	Freshwater To Marine Saline Gradient	RYGGTVMLSFKNLELSEAQLSTARAAADRVFAAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRNAPLNAVMDWTPETKQEGEK*
Ga0129333_114959152	3300010354	Freshwater To Marine Saline Gradient	MLSFKNLELSEAQLSTARAAADRVFTAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDRAVRAALGSWRHAPLNAMMDWTPPQVQQ
Ga0129333_117264662	3300010354	Freshwater To Marine Saline Gradient	MMLSFKNLELSEAQLSTARAAANRVFAAADLEPEQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWVPEAKQEGAE*
Ga0129336_105999952	3300010370	Freshwater To Marine Saline Gradient	MLSFKNLELSPDQLSVARAAADRVFAAADLEPAQCWKHVVSMMAGGLFSRRPVAVWHDAEDKAVRAVLGSWRKTPLNAMMDWTPEAKQEAEK*
Ga0212029_10288862	3300022063	Aqueous	MLSFKNIELSEAQLSTARAAADRVFTAADLEPAQCWRHVVSMMTGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWAPKPAQEGEK
Ga0212029_10333781	3300022063	Aqueous	MLTFKNLELSPDQLSTARAAADRVFSAADLEPAQCWRHVVSMMTGGLFSRRPVAVWHDAEDKAVRAALGSWRNAPLNAVMDWTPETKQEGEK
Ga0212031_10853441	3300022176	Aqueous	MLSFKNIELSADQLAAARSAADAVFRAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRKAPLNATMDWVPAQEAEK
Ga0212031_10906021	3300022176	Aqueous	HPSRYGGTMMLSFKNIELSPDQLSTARAAADRVFTAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWLPPQAPKPAQEAEK
Ga0196905_10537742	3300022198	Aqueous	MLSFKNIELSEAQLSTARAAADRVFTAADLEPAQCWRHVVSMMTGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNATMDWAPAQEGEK
Ga0196905_11957881	3300022198	Aqueous	VCPGCYSRCYGGAVMLSFKNLELSEAQLCTARAAADRVFAAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWAPKPAQEGEK
Ga0196901_10205901	3300022200	Aqueous	MLTFKNIELSEAQLSTARAAADAVFIAAGLEPAQCWRHVVSMMTGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWTPEAKQEGEK
Ga0196901_11006591	3300022200	Aqueous	MLSFKNIELSEAQLSTARAAADAVFRAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWAPKPAQEGEK
Ga0196901_11637341	3300022200	Aqueous	MLSFKNLELSAEQLSTARAAADRVFTAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWVPKPAQEGEK
Ga0208004_10106316	3300025630	Aqueous	MLSFKNIELSADQLSAARAAANAVFRAADLEPAQCWKHVVSMTAGGLFSRRAVAVWHDAEDKAVRAALGSWRHAPLNAMMDWTEAKQEAEK
Ga0208161_10342662	3300025646	Aqueous	MLSFKNLELSEAQLSTARAAANRVFAAADLEPEQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWTPAQEAEK
Ga0208161_10587801	3300025646	Aqueous	MLSFKNIELSPDQLSTARAAADRVFTAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWAPEAKQEG
Ga0208161_10810883	3300025646	Aqueous	MMLSFKNIELSAEQLSTARAAADRVFTAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNATMDWVPEAPKPAQEGEK
Ga0208161_11278932	3300025646	Aqueous	MLSFKNLELSEAQLSTARAAADRVFAAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRNAPLNAVMDWTPETKQEGEK
Ga0208160_11281853	3300025647	Aqueous	MLTFKNIELSEAQLSTARAAADAVFIAAGLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWTPEAKQEGE
Ga0208795_11398922	3300025655	Aqueous	MLTFKNIELSEAQLSTARAAADAVFTAAGLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWAPKPAQEGEK
Ga0208019_10285842	3300025687	Aqueous	RYGGTVMLSFKNLELSEAQLSTARAAADAVFTAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGFWRHAPLNATMDWAPKPAQEGEK
Ga0208644_10209864	3300025889	Aqueous	MLTFKNLELTPDQLSIARAAADAVFAAADLEPAQCWKHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWAPKPAQEGEK
Ga0208644_10425492	3300025889	Aqueous	SFKNLELSPDQLSTARAAADAVFTAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWVPETKQEGEK
Ga0208644_13535622	3300025889	Aqueous	MLSFKNLELSPDQLSAARAAANAVFRAADLEPAQCWRHVVSMMAGGLFNRRALTIWHDAEDKAVRAALGSWRHAPLNAMMD
Ga0208644_13994971	3300025889	Aqueous	MLSFKNIELSADQLSAARAAANAVFRAADLEPAQCWKHVVSMMAGGLFNRRALTIWHDAEDKAVRAALGSWRHAPLNAMMD
Ga0209392_100034111	3300027683	Freshwater Sediment	MLTFKNLELSPDQLEVARAAADRVFRAADLEPEQCWRHVVSLMAGGLFNRRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWAPAQEAEK
Ga0209392_10006952	3300027683	Freshwater Sediment	MLTFKNLELTTDQLEVARAAADRVFAAADLEPEQCWRHVVSLMAGGLFNRRAVTIWHDAEDKAVRSAIGSWRNAPLNAMMDWEPDAKQEAEK
Ga0209392_10077322	3300027683	Freshwater Sediment	MLSFKNLELSPDQLEVARAAADRVFTAADLEPEQCWRHVSSMMAGGLFNHRAVTIWHDAEDKAVRSAIGSWRNAPLNAMMDWAPQAPKPAQEAEK
Ga0209704_10022072	3300027693	Freshwater Sediment	VLTFKNLELTHDQLEVARAAADRVFRAADLEPDQCWRHVSSLMAGGLFNRRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWAPQAPKPAQEADK
Ga0209704_10379612	3300027693	Freshwater Sediment	MLSFKNLELSADQLSTARAAADRVFAAADLEPEQCWRHVSSLMAGGLFNRRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWVPDAKQEAEK
Ga0209704_10918951	3300027693	Freshwater Sediment	MLTFKNLELTPDQLNIARAAANRVFAAADLEPEQCWRHVVSLMAGGLFNRRAVTIWHDAEDKAVRSAIGSWRNAPLNAMMDWTPDAKQEAEK
Ga0209704_11541912	3300027693	Freshwater Sediment	MITFKNLELTPDQLNIARAAANRVFRAADLEPEQCWRHVSSMMAGGLFNHRAVTIWHDAEDKAVRAAIGSWRNAPLNA
Ga0209492_100050310	3300027721	Freshwater Sediment	MMLTFKNLELTTDQLEVARAAANRVFTAADLEPEQCWRHVVSLMAGGLFNRRAVAIWHDAEDKAVRAAIGSWRNAPLNAMMDWVPDTKQEAEK
Ga0209492_10416164	3300027721	Freshwater Sediment	MLTFKNLELSPDQLEVARAAANRVFRAADLEPGQCWRHVVSLMAGGLFNRRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWTPDVKQEAEK
Ga0209593_100277621	3300027743	Freshwater Sediment	MITFKNLELTPDQLNIARAAANRVFRAADLEPEQCWRHVSSMMAGGLFNHRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWAPDAKQEAAQ
Ga0209593_103109561	3300027743	Freshwater Sediment	MLSFKNLELSPDQLEVARAAADRVFAAADLEPEQCWRHVSSLMAGGLFNRRAVTIWHDAEDKAVRSAIGSWRNAPLNAMMDWAPDAKQEAEK
Ga0209288_100017134	3300027762	Freshwater Sediment	MLTFKNLELSPDQLSTARAAADRVFHAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDRAVRAALGSWRHAPLNAMMDWTPETPPQAPKTPQEAEK
Ga0209288_102997542	3300027762	Freshwater Sediment	MMLTFKNLELTPDQLNIARAAANRVFRAADLEPEQCWRHVSSMMAGGLFNHRAVTIWHDAEDKAVRSAIGSWRNAPLNAMMDWVPQAPKPAQEAEK
Ga0209820_10046478	3300027956	Freshwater Sediment	VLSFKNLELSPDQLEVARAAAERVFRAADLEPEQCWRHVSSLMAGGLFNRRAVTIWHDAEDKAVRAAIGSWQNAPLNAMMDWEPDAKQEAEK
Ga0209820_10233232	3300027956	Freshwater Sediment	MITFKNLELTPDQLNIARAAANRVFRAADLEPEQCWRHVSSMMAGGLFNHRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWAPDVKQEAEK
Ga0209820_10589702	3300027956	Freshwater Sediment	MLTFKNLELSPDQLNIARAAANRVFRAADLEPEQCWRHVSSMMAGGLFNHRAVTIWHDAEDKAVRSAIGSWRNAPLNAMMDWAPQAPKPAQEAEK
Ga0209820_10899911	3300027956	Freshwater Sediment	MLTFKNLELTPDQLEIARAAADRVFRAADLEPEQCWRHVSSLMAGGLFNRRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWVPDAKQEAEK
Ga0209820_11131651	3300027956	Freshwater Sediment	MLTFKNLELSPDQLEVARAAANRVFRAADLEPGQCWRHVVSLMAGGLFNRRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWVPDAKQEAEK
Ga0209391_103675661	3300027975	Freshwater Sediment	RRTFYRRIQRLARQPERRMMPLAFKNLELSPDQLEVARAAADRVFAAADLEPEQCWRHVSSLMAGGLFNRRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWVPQAPKPAQEAEK
Ga0209391_104261131	3300027975	Freshwater Sediment	MLTFKNLELSPDQLNIARAASNRVFAAADLEPEQCWRHVSSMMAGGLFNHRAVTIWHDAEDKAVRAAIGSWRNAPLNAMMDWAPRAPKPIIAFSGA
Ga0316191_100056408	3300032258	Worm Burrow	MLTFKNLELSEAQLSTARAAADRVFTAADLEPAQCWRHVVSMTAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNATMDWMPAQEGEK
Ga0316195_100401659	3300032263	Sediment	MITFKNLELTADQLSTARAAADRVFAAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNATMDWAPKPAQEGEK
Ga0316195_100410173	3300032263	Sediment	MLTFKNIELSEAQLSTARAAADAVFTAADLEPAQCWRHVVSMMSGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWVPETKREGEK
Ga0310131_049485_251_550	3300033997	Fracking Water	VLRFKNLELTPDQLATARTAADAAFRAADLEPDQCWRHVVSMMAGGLFSRRPVAVWHDAEDRAVRAALGSWRHAPLNAMMDWTPETPPQAPKTPQGAAQ
Ga0310131_067867_336_611	3300033997	Fracking Water	MLTFKNIELTPDQLAAARAAADRVFRDADLEPAQCWRHVVGMQAGGLFSRRPVAVWHAAEDQAIRAAVGSWRNAALNTMMDWDPEKAEAGK
Ga0310127_000812_12043_12342	3300034072	Fracking Water	VLTFKNLELSADQLSTARAAADAVFRAADLEPAQCWKHVVSMMAGGLFSRRPVAVWHDAEDRAVRAALGSWRKAPLNAMMDWSPETPPQAPKTPQEAEK
Ga0310127_050064_467_757	3300034072	Fracking Water	VLTFKNLELSPNQLAIARAAANRAFAAANLEPDQCWRHVVSMMAGGLFSRRPVAVWHDAEDRAVRAALGSWRKAPLNAMMDWTPAQTPKPAQEAEK
Ga0310127_251460_135_434	3300034072	Fracking Water	MLSFKNLELTADQLSAARAAADAVFTAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRKAPLNAMMDWTPEAPPQAPKPAQEAAQ
Ga0310130_0230769_17_316	3300034073	Fracking Water	MLSFKNIELSAEQLSTARAAADRVFTAADLEPAQCWRHVVSMMAGGLFSRRPVAVWHDAEDKAVRAALGSWRHAPLNAMMDWSPKVPPQASKTPQEAEK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F070057

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences