Metagenome / Metatranscriptome Family F070024

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070024
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	49 residues
Representative Sequence	GCLQGFGSVAVLLAHENLLENQRVKNFAFRMLIKDWMLEQYCNGIVSASK
Number of Associated Samples	98
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.56 %
% of genes from short scaffolds (< 2000 bps)	82.93 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.350 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (26.016 % of family members)
Environment Ontology (ENVO)	Unclassified (49.593 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (50.407 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 80.00% β-sheet: 0.00% Coil/Unstructured: 20.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF12802	MarR_2	44.72
PF13463	HTH_27	15.45
PF00072	Response_reg	8.94
PF08521	2CSK_N	7.32
PF00486	Trans_reg_C	5.69
PF03099	BPL_LplA_LipB	2.44
PF00154	RecA	1.63
PF00856	SET	1.63
PF13342	Toprim_Crpt	1.63
PF14497	GST_C_3	0.81
PF13616	Rotamase_3	0.81
PF02798	GST_N	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	7.32
COG0095	Lipoate-protein ligase A	Coenzyme transport and metabolism [H]	2.44
COG0321	Lipoate-protein ligase B	Coenzyme transport and metabolism [H]	2.44
COG0340	Biotin-protein ligase	Coenzyme transport and metabolism [H]	2.44
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	1.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.35 %
All Organisms	root	All Organisms	40.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.35 %
cellular organisms	root	All Organisms → cellular organisms	40.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.35 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	39.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.35 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	39.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.35 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	38.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.35 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	35.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.35 %
Limnohabitans	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans	20.33 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	1.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.35 %
unclassified Limnohabitans	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans	13.01 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	1.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.35 %
Limnohabitans sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp.	8.13 %
Limnohabitans sp. Rim47	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. Rim47	4.88 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	1.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000268\|M3P_10004022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. Rim47	5377	Open in IMG/M
3300000268\|M3P_10009170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. Rim47	3613	Open in IMG/M
3300000269\|M3P_1014701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	1008	Open in IMG/M
3300000756\|JGI12421J11937_10119271	Not Available	691	Open in IMG/M
3300000929\|NpDRAFT_10016473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	5117	Open in IMG/M
3300003412\|JGI25912J50252_10111117	Not Available	654	Open in IMG/M
3300003431\|JGI25913J50563_1001134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp.	5407	Open in IMG/M
3300003497\|JGI25925J51416_10138762	Not Available	557	Open in IMG/M
3300004112\|Ga0065166_10310948	Not Available	645	Open in IMG/M
3300005517\|Ga0070374_10007047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	5344	Open in IMG/M
3300005517\|Ga0070374_10317750	Not Available	789	Open in IMG/M
3300005517\|Ga0070374_10347344	Not Available	749	Open in IMG/M
3300005517\|Ga0070374_10377178	Not Available	714	Open in IMG/M
3300005580\|Ga0049083_10078443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans	1154	Open in IMG/M
3300005581\|Ga0049081_10253441	Not Available	617	Open in IMG/M
3300005581\|Ga0049081_10292815	Not Available	562	Open in IMG/M
3300005582\|Ga0049080_10240526	Not Available	592	Open in IMG/M
3300005583\|Ga0049085_10147538	Not Available	795	Open in IMG/M
3300005584\|Ga0049082_10024054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans	2118	Open in IMG/M
3300005585\|Ga0049084_10005502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp.	5292	Open in IMG/M
3300005662\|Ga0078894_10286261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp.	1495	Open in IMG/M
3300005662\|Ga0078894_10711525	Not Available	885	Open in IMG/M
3300005662\|Ga0078894_10728466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	873	Open in IMG/M
3300005662\|Ga0078894_11044758	Not Available	700	Open in IMG/M
3300006641\|Ga0075471_10186664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1084	Open in IMG/M
3300006805\|Ga0075464_10752113	Not Available	604	Open in IMG/M
3300007544\|Ga0102861_1172688	Not Available	590	Open in IMG/M
3300007545\|Ga0102873_1191881	Not Available	614	Open in IMG/M
3300007547\|Ga0102875_1178591	Not Available	661	Open in IMG/M
3300007548\|Ga0102877_1149574	Not Available	660	Open in IMG/M
3300007548\|Ga0102877_1238291	Not Available	512	Open in IMG/M
3300007549\|Ga0102879_1088458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp.	969	Open in IMG/M
3300007550\|Ga0102880_1085550	Not Available	831	Open in IMG/M
3300007551\|Ga0102881_1182485	Not Available	580	Open in IMG/M
3300007585\|Ga0102916_1019560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp.	1683	Open in IMG/M
3300007600\|Ga0102920_1096166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	941	Open in IMG/M
3300007600\|Ga0102920_1302113	Not Available	516	Open in IMG/M
3300007603\|Ga0102921_1130737	Not Available	911	Open in IMG/M
3300007603\|Ga0102921_1336371	Not Available	537	Open in IMG/M
3300007606\|Ga0102923_1057478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp.	1221	Open in IMG/M
3300007617\|Ga0102897_1226896	Not Available	555	Open in IMG/M
3300007624\|Ga0102878_1053931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1223	Open in IMG/M
3300007624\|Ga0102878_1056138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp.	1196	Open in IMG/M
3300007636\|Ga0102856_1093418	Not Available	501	Open in IMG/M
3300007642\|Ga0102876_1125735	Not Available	690	Open in IMG/M
3300007647\|Ga0102855_1070045	Not Available	945	Open in IMG/M
3300007681\|Ga0102824_1125156	Not Available	675	Open in IMG/M
3300007716\|Ga0102867_1121007	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300007716\|Ga0102867_1151655	Not Available	627	Open in IMG/M
3300007716\|Ga0102867_1207893	Not Available	539	Open in IMG/M
3300007862\|Ga0105737_1177896	Not Available	559	Open in IMG/M
3300007954\|Ga0105739_1042097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp.	981	Open in IMG/M
3300007973\|Ga0105746_1227132	Not Available	641	Open in IMG/M
3300007974\|Ga0105747_1352667	Not Available	504	Open in IMG/M
3300007981\|Ga0102904_1073748	Not Available	787	Open in IMG/M
3300008021\|Ga0102922_1115559	Not Available	847	Open in IMG/M
3300008052\|Ga0102893_1143675	Not Available	699	Open in IMG/M
3300008055\|Ga0108970_11544815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1224	Open in IMG/M
3300008117\|Ga0114351_1373579	Not Available	624	Open in IMG/M
3300008119\|Ga0114354_1277418	Not Available	520	Open in IMG/M
3300008119\|Ga0114354_1277463	Not Available	520	Open in IMG/M
3300008261\|Ga0114336_1005786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	8400	Open in IMG/M
3300008261\|Ga0114336_1121105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1199	Open in IMG/M
3300009155\|Ga0114968_10018050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	4902	Open in IMG/M
3300009158\|Ga0114977_10372170	Not Available	801	Open in IMG/M
3300009160\|Ga0114981_10012094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp.	5113	Open in IMG/M
3300009161\|Ga0114966_10052648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2885	Open in IMG/M
3300009181\|Ga0114969_10493724	Not Available	686	Open in IMG/M
3300009185\|Ga0114971_10229553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp.	1092	Open in IMG/M
3300009194\|Ga0114983_1097207	Not Available	651	Open in IMG/M
3300009684\|Ga0114958_10322151	Not Available	754	Open in IMG/M
3300010388\|Ga0136551_1012445	Not Available	1738	Open in IMG/M
3300010885\|Ga0133913_13445685	Not Available	1034	Open in IMG/M
3300013006\|Ga0164294_10394321	Not Available	949	Open in IMG/M
3300013372\|Ga0177922_10240250	Not Available	562	Open in IMG/M
3300013372\|Ga0177922_10946911	Not Available	532	Open in IMG/M
3300020151\|Ga0211736_10726964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	919	Open in IMG/M
3300020162\|Ga0211735_10920487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	887	Open in IMG/M
3300020162\|Ga0211735_10922038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. Rim47	5386	Open in IMG/M
3300020172\|Ga0211729_10784257	Not Available	586	Open in IMG/M
3300020554\|Ga0208599_1051241	Not Available	591	Open in IMG/M
3300020568\|Ga0208598_1036209	Not Available	667	Open in IMG/M
3300021963\|Ga0222712_10293217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1023	Open in IMG/M
3300022748\|Ga0228702_1009726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. Rim47	3849	Open in IMG/M
3300023174\|Ga0214921_10003246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans	25155	Open in IMG/M
3300023174\|Ga0214921_10013272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans	9695	Open in IMG/M
3300023184\|Ga0214919_10033499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. Rim47	5284	Open in IMG/M
3300023184\|Ga0214919_10345595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	996	Open in IMG/M
3300024343\|Ga0244777_10179731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1362	Open in IMG/M
3300024348\|Ga0244776_10343769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	1006	Open in IMG/M
3300024505\|Ga0255150_1059845	Not Available	600	Open in IMG/M
3300024863\|Ga0255246_1055589	Not Available	923	Open in IMG/M
3300025872\|Ga0208783_10104197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1240	Open in IMG/M
3300027154\|Ga0255111_1046308	Not Available	868	Open in IMG/M
3300027188\|Ga0208921_1047196	Not Available	633	Open in IMG/M
3300027206\|Ga0208023_1017597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans	1249	Open in IMG/M
3300027223\|Ga0208169_1088400	Not Available	527	Open in IMG/M
3300027302\|Ga0255096_1049724	Not Available	857	Open in IMG/M
3300027508\|Ga0255072_1079140	Not Available	658	Open in IMG/M
3300027798\|Ga0209353_10174366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	951	Open in IMG/M
3300027804\|Ga0209358_10087259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans	1756	Open in IMG/M
3300027805\|Ga0209229_10447581	Not Available	556	Open in IMG/M
3300027808\|Ga0209354_10335373	Not Available	597	Open in IMG/M
3300027892\|Ga0209550_10023550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. Rim47	5338	Open in IMG/M
3300027892\|Ga0209550_10165670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1553	Open in IMG/M
3300031758\|Ga0315907_10179820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1780	Open in IMG/M
3300031784\|Ga0315899_11573915	Not Available	546	Open in IMG/M
3300031786\|Ga0315908_10182928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1734	Open in IMG/M
3300031786\|Ga0315908_10703182	Not Available	833	Open in IMG/M
3300033984\|Ga0334989_0096818	Not Available	1637	Open in IMG/M
3300033995\|Ga0335003_0081932	Not Available	1691	Open in IMG/M
3300034021\|Ga0335004_0131532	Not Available	1637	Open in IMG/M
3300034060\|Ga0334983_0097486	Not Available	1895	Open in IMG/M
3300034068\|Ga0334990_0133718	Not Available	1350	Open in IMG/M
3300034068\|Ga0334990_0261235	Not Available	944	Open in IMG/M
3300034104\|Ga0335031_0762620	Not Available	547	Open in IMG/M
3300034105\|Ga0335035_0712872	Not Available	513	Open in IMG/M
3300034106\|Ga0335036_0047263	All Organisms → cellular organisms → Bacteria	3310	Open in IMG/M
3300034116\|Ga0335068_0130200	Not Available	1381	Open in IMG/M
3300034118\|Ga0335053_0030572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans	3884	Open in IMG/M
3300034121\|Ga0335058_0017340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans	4306	Open in IMG/M
3300034121\|Ga0335058_0018542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans	4153	Open in IMG/M
3300034121\|Ga0335058_0593512	Not Available	620	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.19%
Host-Associated	Host-Associated	0.81%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.37%
Terrestrial	Environmental → Terrestrial	0.81%
Plants	Host-Associated → Plants	0.81%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	65.04%
Marine	Environmental → Aquatic → Marine	33.33%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.81%
Leaf	Host-Associated → Plants → Leaf	0.81%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	30.89%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	26.02%
Lentic	Environmental → Aquatic → Freshwater → Lentic	22.76%
Coastal	Environmental → Aquatic → Marine → Coastal	5.69%
River	Environmental → Aquatic → Freshwater → River	4.06%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	3.25%
Lotic	Environmental → Aquatic → Freshwater → Lotic	2.44%
Pond	Environmental → Aquatic → Freshwater → Pond	0.81%
Creek	Environmental → Aquatic → Freshwater → Creek	0.81%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.81%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.81%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	30.89%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	26.02%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	20.33%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.69%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	4.06%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	3.25%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	2.44%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	1.63%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.81%
Unclassified	Environmental → Aquatic → Freshwater → Pond → Unclassified	0.81%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.81%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.81%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	26.02%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	15.45%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	13.82%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	6.50%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	5.69%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.88%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	4.06%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	4.06%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	3.25%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	3.25%
Lotic	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Lotic	2.44%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.44%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	1.63%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.81%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.81%
Pond Fresh Water	Environmental → Aquatic → Freshwater → Pond → Unclassified → Pond Fresh Water	0.81%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.81%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.81%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	0.81%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.81%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000268	Lotic microbial communities from Mississippi River at two locations in the state of Minnesota, sample from River Site 1, Mississippi Headwaters ver2	Environmental	Open in IMG/M
3300000269	Lotic microbial communities from Mississippi River at two locations in the state of Minnesota, sample from River Site 7, Mississippi Headwaters	Environmental	Open in IMG/M
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300000929	Marine plume microbial communities from the Columbia River - 15 PSU	Environmental	Open in IMG/M
3300003412	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD	Environmental	Open in IMG/M
3300003431	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN	Environmental	Open in IMG/M
3300003497	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005583	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300005585	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300007544	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3	Environmental	Open in IMG/M
3300007545	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-3	Environmental	Open in IMG/M
3300007547	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-02	Environmental	Open in IMG/M
3300007548	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-3	Environmental	Open in IMG/M
3300007549	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-02	Environmental	Open in IMG/M
3300007550	Estuarine microbial communities from the Columbia River estuary - metaG 1549A-3	Environmental	Open in IMG/M
3300007551	Estuarine microbial communities from the Columbia River estuary - metaG 1549B-3	Environmental	Open in IMG/M
3300007585	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-3	Environmental	Open in IMG/M
3300007600	Estuarine microbial communities from the Columbia River estuary - metaG 1568A-3	Environmental	Open in IMG/M
3300007603	Estuarine microbial communities from the Columbia River estuary - metaG 1568-02	Environmental	Open in IMG/M
3300007606	Estuarine microbial communities from the Columbia River estuary - metaG 1569-02	Environmental	Open in IMG/M
3300007617	Estuarine microbial communities from the Columbia River estuary - metaG 1554B-02	Environmental	Open in IMG/M
3300007624	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-02	Environmental	Open in IMG/M
3300007636	Estuarine microbial communities from the Columbia River estuary - metaG 1371A-3	Environmental	Open in IMG/M
3300007642	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-3	Environmental	Open in IMG/M
3300007647	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02	Environmental	Open in IMG/M
3300007681	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.753	Environmental	Open in IMG/M
3300007716	Estuarine microbial communities from the Columbia River estuary - metaG 1546B-3	Environmental	Open in IMG/M
3300007862	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373A_0.2um	Environmental	Open in IMG/M
3300007954	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373B_0.2um	Environmental	Open in IMG/M
3300007973	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2um	Environmental	Open in IMG/M
3300007974	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2um	Environmental	Open in IMG/M
3300007981	Estuarine microbial communities from the Columbia River estuary - metaG 1556A-3	Environmental	Open in IMG/M
3300008021	Estuarine microbial communities from the Columbia River estuary - metaG 1569A-3	Environmental	Open in IMG/M
3300008052	Estuarine microbial communities from the Columbia River estuary - metaG 1553A-02	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300008117	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NA	Environmental	Open in IMG/M
3300008119	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0110-C-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300009185	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG	Environmental	Open in IMG/M
3300009194	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 RT	Environmental	Open in IMG/M
3300009684	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG	Environmental	Open in IMG/M
3300010388	Freshwater microbial communities from the surface of the forest pond in Jussy, Geneva, Switzerland - JEBV, may 2015	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300013006	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020162	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020554	Freshwater microbial communities from Lake Mendota, WI - 17AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020568	Freshwater microbial communities from Lake Mendota, WI - 22JUN2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022748	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 20-17_Aug_MG	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300024505	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepA_8h	Environmental	Open in IMG/M
3300024863	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepC_0h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025872	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027154	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Yuk_RepA_8h	Environmental	Open in IMG/M
3300027188	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709 (SPAdes)	Environmental	Open in IMG/M
3300027206	Estuarine microbial communities from the Columbia River estuary - metaG 1370A-02 (SPAdes)	Environmental	Open in IMG/M
3300027223	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-3 (SPAdes)	Environmental	Open in IMG/M
3300027302	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepA_8d	Environmental	Open in IMG/M
3300027508	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepA_8h	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027804	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027805	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031786	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA124	Environmental	Open in IMG/M
3300033984	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Mar2001-rr0030	Environmental	Open in IMG/M
3300033995	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056	Environmental	Open in IMG/M
3300034021	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Oct2014-rr0057	Environmental	Open in IMG/M
3300034060	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16May2013-rr0016	Environmental	Open in IMG/M
3300034068	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Apr2016-rr0031	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034116	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOR	Environmental	Open in IMG/M
3300034118	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165	Environmental	Open in IMG/M
3300034121	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
M3P_100040221	3300000268	Lotic	NLGQGCLQGFGFVAVLVAHENLLENQRVKNGAFRKLIKDWMLEQYFNGIVLSSK*
M3P_100091705	3300000268	Lotic	GCLQGFGSVAVLLAHENLLENQRVKNFAFRMLIKDWMLEQYCNGIVSASK*
M3P_10147011	3300000269	Lotic	GSVAVLLAHENLLENQRVKNFAFRMLIKDWMLEQYCNGIVSASK*
JGI12421J11937_101192712	3300000756	Freshwater And Sediment	GFGFVAVLLAHENLLENQRVENGASRKLIKDWMLEQYFNSIVLSSK*
NpDRAFT_100164737	3300000929	Freshwater And Marine	GCLQGFGSVAVLLAHENLLENQRVKKFAFRMLIKDWMLEQYCKRIVSASK*
JGI25912J50252_101111171	3300003412	Freshwater Lake	GFGSVAVLLAHENLLENQRVKKFAFRMLIKDWMLEQYCKRNVSASK*
JGI25913J50563_10011341	3300003431	Freshwater Lake	ELFFNLGQGCLQGFGSVAVLLAHENLLENQRVKNFAFRMLIKDWMLEQYCNGIVSASK*
JGI25925J51416_101387622	3300003497	Freshwater Lake	LLAHENLLENQRVKKFAFRMLIKDWMLEQYCKRNVSASK*
Ga0065166_103109481	3300004112	Freshwater Lake	GFVAVLVAHENLLENQRFKKGAFRKLIKDWMLEQYCNAIVSPSK*
Ga0070374_100070471	3300005517	Freshwater Lake	VAVLLAHENLLENQRVKKFAFRMLIKDWMLEQYCKRIVSVSK*
Ga0070374_103177501	3300005517	Freshwater Lake	QGFGSVAVLLAHENLLENQRVKKFAFRMLIKDWMLEQYCNGIV*
Ga0070374_103473441	3300005517	Freshwater Lake	GQGCLQGFGFVAVLVAHENLLENQRVKNGAFRKLIKDWMLEQYCNGIVSTIQ*
Ga0070374_103771781	3300005517	Freshwater Lake	LGQGCLQGFGFVAVLVAHENLLENQRVKNGAFRKLIKDWMLEQYFNGIVLSSK*
Ga0049083_100784431	3300005580	Freshwater Lentic	FGSVAVLLAHENLLENQRVKKFAFRMLIKDWMLEQYCKRNVSASK*
Ga0049081_102534412	3300005581	Freshwater Lentic	GFVAVLFAHENLLENQRVKSFAFRVLIKDWMLEQYCNAIVLASK*
Ga0049081_102928151	3300005581	Freshwater Lentic	VAVLLAHENLLENQRVKKFAFRMLIKDWMLEQYCKRIVSASK*
Ga0049080_102405261	3300005582	Freshwater Lentic	AKLFFNLGQGCLQGFGSVAVLLAHENLLGNQRVKNGAFRMLIKDWMLEQYCNGIV*
Ga0049085_101475381	3300005583	Freshwater Lentic	GCLQGFGSVAVLLAHENLLKNQRVKKSAFRMLIKDWMLEQYCKRIVSGSK*
Ga0049082_100240544	3300005584	Freshwater Lentic	NLLENQRVKKFAFRMLIKDWMLEQYCKRIVSASK*
Ga0049084_100055027	3300005585	Freshwater Lentic	GQGCLQGFGSVAVLLAHENLLGNQRVKNGAFRMLIKDWMLEQYCNGIVSASK*
Ga0078894_102862613	3300005662	Freshwater Lake	SVAVLLAHENLLENQRVKNFAFRMLIKDWMLEQYCNGIVSVSK*
Ga0078894_107115253	3300005662	Freshwater Lake	FFNLGQGCLQGFGFVAVLVAHENLLENQRVKNDAFRKLIKDWMLEQYFNGIVL*
Ga0078894_107284663	3300005662	Freshwater Lake	FGFVAVLVAHENLLENQRVKNGAFRKLIKDWMLEQYFNGIVLSSK*
Ga0078894_110447582	3300005662	Freshwater Lake	GFGFVAVLIAHENLLENQRFKKGAFRKLIKDWMLEQYCKAIVSIRK*
Ga0075471_101866641	3300006641	Aqueous	GFVAVLVAHRNLHKNQRVEKLAFRKLIKDWMLEQYCNGIVSTSK*
Ga0075464_107521132	3300006805	Aqueous	CLQGFGFIAVWVAHRNLHKNQRVEKLAFRKLIKDWMLKQYCNGIVLSSK*
Ga0102861_11726881	3300007544	Estuarine	HDGAFAKLFFDLGQGCLQGFGFVAVLVAHENLLENQRFKKGAFRKLIKDWMLEQYCNAIVSPSK*
Ga0102873_11918812	3300007545	Estuarine	ELFFNLGQGCLQGFGSVAVLLAHENLLKNQRVKKFAFRMLIKDWMLEQYCNGIVSASK*
Ga0102875_11785911	3300007547	Estuarine	NLLENQRVKKFAFRMLIKDWMLEQYCKAIVSIRK*
Ga0102877_11495742	3300007548	Estuarine	AVLLAHENLLENQRVKKFAFRMLIKDWMLEQYCKRIVSASK*
Ga0102877_12382911	3300007548	Estuarine	VLLAHENLLENQRVKKFAFRMLIKDWMPEQYCKRIVSASK*
Ga0102879_10884581	3300007549	Estuarine	VLLAHENLLENQRVKNFAFRMLIKDWMLEQYCNGIVSASK*
Ga0102880_10855501	3300007550	Estuarine	THDGAFAELFFNLGQGCLQGFGSVAVLLAHENLLENQRVKNFAFRMLIKDWMLEQYCNGIVSASK*
Ga0102881_11824851	3300007551	Estuarine	LFFNLGQGCLQGFGSVAVLLAHENLLENQRVKKFAFRMLIKDWMLEQYCNGIV*
Ga0102916_10195604	3300007585	Estuarine	DGAFAKLFFNLGQGCLQGFGSVAVLLAHENLLENQRVKNFAFRMLIKDWMLEQYCNGIVSASK*
Ga0102920_10961663	3300007600	Estuarine	GSVAVLLAHENLLENQRVKKFAFRMLIKDWMLEQYCKRIVSASK*
Ga0102920_13021131	3300007600	Estuarine	GSVAVLLAHENLLENQRVKKFAFRMLIKDWMLEQYCKRIVSTSK*
Ga0102921_11307371	3300007603	Estuarine	THDGAFAELFFNLGQGCLQGFGSVAVLLAHENLLENQRVKNFAFRMLIKDWMLEQYCNGIVSTSK*
Ga0102921_13363712	3300007603	Estuarine	VLLAHENLLENQRVKKFAFRMLIKDWMLEQYCKRNVSASK*
Ga0102923_10574783	3300007606	Estuarine	AVLLAHENLLENQRVKKFAFRMLIKDWMLEQYCNGIVSASK*
Ga0102897_12268962	3300007617	Estuarine	AHENLLENQRFKKGAFRKLIKDWMLEQYCKAIVSIRK*
Ga0102878_10539311	3300007624	Estuarine	LFFNLGQGCLQGFGFVAVLVAHENLLENQRVKNGAFRKLIKDWMLEQYFNGIVLSSK*
Ga0102878_10561381	3300007624	Estuarine	HENLLENQRVKNFAFRMLIKDWMLEQYCNGIVSASK*
Ga0102856_10934181	3300007636	Estuarine	AFAELFFNLGQGCLQGFGSVAVLLAHENLLENQRVKNFAFRMLIKDWMLEQYCNGIVSASK*
Ga0102876_11257351	3300007642	Estuarine	FGSVAVLLAHENLLENQRVKKFAFRMLIKDWMLEQYCKRIVSVSK*
Ga0102855_10700451	3300007647	Estuarine	FAELFFNLGQGCLQGFGSVAVLLAHENLLENQRVKNFAFRMLIKDWMLEQYCNGIVSASK
Ga0102824_11251561	3300007681	Estuarine	FGSVAVLLAHENLLENQRVKKFAFRMLIKDWMPEQYCKRIVSASK*
Ga0102867_11210071	3300007716	Estuarine	LIAHENLLENQRFKKGAFRKLIKDWMLEQYCKAIVSIR
Ga0102867_11516551	3300007716	Estuarine	AHDGAFAKLFFNLGQGCLQGFGFVAVLVAHENLLENQRVKNGAFRKLIKDWMLEQYCKAIVSIRK*
Ga0102867_12078932	3300007716	Estuarine	ELFFNLGQGCLQGFGSVAVLLAHENLLENQRVKNFAFRMLIKDWMLEQYCNGIV*
Ga0105737_11778962	3300007862	Estuary Water	HDGAFAELFFNLGQGCLQGFGSVAVLLAHENLLENQRVKNFAFRMLIKDWMLEQYCNGIVSASK*
Ga0105739_10420971	3300007954	Estuary Water	QGCLQGFGSVAVLLAHENLLENQRVKNFAFRMLIKDWMLEQYCNGIVSASK*
Ga0105746_12271322	3300007973	Estuary Water	GQGCLQGFGSVAVLLAHENLLENQRVKNFTFRMLIKDWMLEQYCNGIVSASK*
Ga0105747_13526671	3300007974	Estuary Water	ENLLENQRVKNFAFRMLIKDWMLEQYCNGIVSASK*
Ga0102904_10737481	3300007981	Estuarine	LGQGCLQGFGSVAVLLAHENLLENQRVKKFAFRMLIKDWMLEQYCKRIVSTSK*
Ga0102922_11155592	3300008021	Estuarine	FDDFAFTQAHDGAFAELFFNLGQGSLEGFGFVAVLIAHENLLENQRFKKGAFRKLIKDWMLEQYCKAIVSIRK*
Ga0102893_11436752	3300008052	Estuarine	TQAHDGAFAELFFNLGQGSLEGFGFVAVLIAHENLLENQRVKNGTFRKLIKDWMLEQYFNGIVLSSK*
Ga0108970_115448153	3300008055	Estuary	AVLVAHENLLENQRVKNGAFRKLIKDWMLEQYFNSIVLSSK*
Ga0114351_13735791	3300008117	Freshwater, Plankton	SVAVLLAHENLLENQRVKKFAFRMLIKDWMLEQYCKRNVSASK*
Ga0114354_12774182	3300008119	Freshwater, Plankton	VLLAHENLLENQRVKKFAFRMLIKDWMLEQYCKRIVSASK*
Ga0114354_12774631	3300008119	Freshwater, Plankton	VLLAHENLLENQRVKKFAFRMLIKDWMLEQYCKRIVSGSK*
Ga0114336_10057861	3300008261	Freshwater, Plankton	AFAKLFFNLGQGCLQGFGFVAVLVAHENLLENQRVKNDAFRKLIKDWMLEQYFNGIVL*
Ga0114336_11211053	3300008261	Freshwater, Plankton	AFAKLFFNLGQGCLQGFGFVAVLVAHENLLENQRVKNGAFRKLIKDWMLEQYFNGIVLSSK*
Ga0114968_100180508	3300009155	Freshwater Lake	LLAHENLLENQRVKKFAFRMLIKDWMLEQYCKRIVSASK*
Ga0114977_103721702	3300009158	Freshwater Lake	GSVAVLLAHENLLENQRVKNFAFRMLIKDWMLEQYCNGIV*
Ga0114981_100120941	3300009160	Freshwater Lake	ELFFNLGQGCLQGFGFVAVLFAHENLLENQRVKNVAFRVLIKDWMLEQYFNCIVSIRK*
Ga0114966_100526481	3300009161	Freshwater Lake	THDGAFAELFFNLGQGCLQGFGSVAVLLAHENLLENQRVKNDAFRMLIKDWMLEQYCNGIVSASK*
Ga0114969_104937242	3300009181	Freshwater Lake	LGQGCLQGFGSVAVLLAHENLLENQRVKKFAFRMLIKDWMLEQYCKRIVSASK*
Ga0114971_102295533	3300009185	Freshwater Lake	HENLLENQRVKNFAFRMLIKDWMLEQYCNGIVSVSK*
Ga0114983_10972072	3300009194	Deep Subsurface	GCLQGFGFVAVLVAHENLLENQLVKNGAFRKLIKDWMLEQYCKRNVSASK*
Ga0114958_103221512	3300009684	Freshwater Lake	FNLGQGCLQGFGSVAVLLAHENLLENQRVKNFAFRMLIKDWMLEQYCNGIVSASK*
Ga0136551_10124451	3300010388	Pond Fresh Water	ENLLENQRVKNGAFRKLIKDWMLEQYCNGIVSTIQ*
Ga0133913_134456853	3300010885	Freshwater Lake	ELFFNLGQGCLQGFGSVAVLLAHENLLENQRVKNFTFRMLIKDWMLEQYCNGIVSASK*
Ga0164294_103943213	3300013006	Freshwater	AQTHDGAFAELFFNLGQGCLQGFGSVAVLLAHENLLENQRVKNFAFRMLIKDWMLEQYCNGIV*
Ga0177922_102402502	3300013372	Freshwater	AILLAHENLLENQRVKKFAFRMLIKDWMLEQYCKRNVSASK*
Ga0177922_109469112	3300013372	Freshwater	AVLLAHENLLENQRVKKFAFRMLIKDWMLEQYCNGIVSTSK*
Ga0211736_107269641	3300020151	Freshwater	GQGCLQGFGFVAVLVAHENLLENQRVKNGAFRKLIKDWMLEQYSNGIVLSSK
Ga0211735_109204873	3300020162	Freshwater	AVLVAHENLLENQRFKKGAFRKLIKDWMLEQYFNGIVL
Ga0211735_109220388	3300020162	Freshwater	AVLVAHENLLENQRFKKGAFRKLIKDWMLEQYCNAIVSSSK
Ga0211729_107842571	3300020172	Freshwater	NLGQGCLQGFGFVAVLVAHENLLENQRFKKGAFRKLIKDWMLEQYCNAIVSPSK
Ga0208599_10512412	3300020554	Freshwater	GCLQGFGSVAVLLAHENLLENQRVKKFALRMLIKDWMLEQYCKRIVSGSK
Ga0208598_10362091	3300020568	Freshwater	FNLGQGCLQGFGFVAVLVAHENLLENQRVKKFALRMLIKDWMLEQYCKRIVSGSK
Ga0222712_102932171	3300021963	Estuarine Water	AKLFFDLGQGCLQGFGFVAVLVAHENLLENQRVKNGAFRKLIKDWMLEQYFNGIVSSSK
Ga0228702_10097261	3300022748	Freshwater	CLQGFGFVAVWVAHENLLENQRVKNGASRKLIKDWMLEQYCKPIV
Ga0214921_1000324622	3300023174	Freshwater	GFGSVAVLLAHENLLENQRVKNFAFRMLIKDWMLEQYCNGIV
Ga0214921_1001327211	3300023174	Freshwater	GFGSVAVLLAHENLLENQRVKNFAFRMLIKDWMLEQYCNGIVSASK
Ga0214919_100334991	3300023184	Freshwater	FGSVAVLLAHENLLENQRVKNFAFRMLIKDWMLEQYCNGIV
Ga0214919_103455953	3300023184	Freshwater	GFGFVAVLLAHENLLENQRVKNGAFRVLIKDWMLEQYCNGIVSMRK
Ga0244777_101797311	3300024343	Estuarine	AELFFNLGQGSLEGFGFVAVLIAHENLLENQRFKKGAFRKLIKDWMLEQYCKAIVSIRK
Ga0244776_103437693	3300024348	Estuarine	FVAVLVAHENLLENQRVKNGAFRKLIKDWMLEQYFNGIVSSSK
Ga0255150_10598451	3300024505	Freshwater	GVAHENLLENQRVENGASRKLIKDWMLEQYCNGIVVLSK
Ga0255246_10555892	3300024863	Freshwater	GCLQGFGSVAVLLAHENLLENQRVKKFAFRMLIKDWMLEQYCKRNVSASK
Ga0208783_101041973	3300025872	Aqueous	VAVLVAHRNLHKNQRVEKLAFRKLIKDWMLEQYCNGIVSTSK
Ga0255111_10463083	3300027154	Freshwater	HENLLENQRVKSFAFRVLIKDWMLEQYCNAIVLASK
Ga0208921_10471961	3300027188	Estuarine	LGQGCLQGFGSVAVLLAHENLLENQRVKKFAFRMLIKDWMPEQYCKRIVSASK
Ga0208023_10175971	3300027206	Estuarine	LFFNLGQGCLQGFGSVAVLLAHENLLENQRVKNFAFRMLIKDWMLEQYCNGIVSASK
Ga0208169_10884002	3300027223	Estuarine	FGSVAVLLAHENLLENQRVKKFAFRMLIKDWMPEQYCKRIVSASK
Ga0255096_10497241	3300027302	Freshwater	HENLLENQRVKNGASRKLIKDWMLEQYCNGIVLTIQ
Ga0255072_10791401	3300027508	Freshwater	CLQGFGSVAVLLAHENLLENQRVKKFAFRMLIKDWMLEQYCKRNV
Ga0209353_101743661	3300027798	Freshwater Lake	LQGFGSVAVLLAHENLLENQRVKKFAFRMLIKDWMLEQYCKRNVSASK
Ga0209358_100872591	3300027804	Freshwater Lake	GQGCLQGFGFVAVLVAHENLLENQRVKNGAFRKLIKDWMLEQYCNGIVSTIQ
Ga0209229_104475811	3300027805	Freshwater And Sediment	LAHENLLENQRVKKFALRMLIKDWMLEQYCKRIVSGSK
Ga0209354_103353732	3300027808	Freshwater Lake	LFFNLGQGCLQGFGSVAVLLAHENLLENQRVKKFAFRMLIKDWMLEQYCKRIVSASK
Ga0209550_100235501	3300027892	Freshwater Lake	AVLVAHENLLENQRVKNGAFRKLIKDWMLEQYFNGIVLSSK
Ga0209550_101656701	3300027892	Freshwater Lake	FFNLGQGCLQGFGFVAVLVAHENLLENQRVKNDAFRKLIKDWMLEQYFNGIVL
Ga0315907_101798201	3300031758	Freshwater	GCLQGFGFVAVLVAHENLLENQRVKNDAFRKLIKDWMLEQYFSGIVL
Ga0315899_115739151	3300031784	Freshwater	FGSVAVLLAHENLLENQRVKKFAFRMLIKDWMLEQYCKRIVSGSK
Ga0315908_101829284	3300031786	Freshwater	AVLVAHENLLENQRVKNGAFRKLIKDWMLEQYCNAIVSIRK
Ga0315908_107031823	3300031786	Freshwater	LGQGCLQGFGFVAVLVAHENLLENQRVKNGAFRKLIKDWMLEQYFNGIVLSSK
Ga0334989_0096818_1444_1635	3300033984	Freshwater	AQTHDGAFAELFFNLGQGCLQGFGSVAVLLAHENLLENQRVKKFAFRMLIKDWMLEQYCNGIV
Ga0335003_0081932_1_153	3300033995	Freshwater	GCLQGFGSVAVLLAHENLLENQRVKKFAFRMLIKDWMLEQYCKRIVSTSK
Ga0335004_0131532_3_236	3300034021	Freshwater	HLDVFDDFAFAQAHDGAFAKLFFNLGQGCLQGFGFVAVLVAHENLLENQRVKNGAFRKLIKDWMLEQYFNGIVLSSK
Ga0334983_0097486_1737_1883	3300034060	Freshwater	LQGFGFVAVLVAHENLLENQRVKNGAFRKLIKDWMLEQYFNGIVLSSK
Ga0334990_0133718_1229_1348	3300034068	Freshwater	SVAVLLAHENLLENQRVKKFAFRMLIKDWMLEQYCNGIV
Ga0334990_0261235_771_932	3300034068	Freshwater	LGQGCLQGFGSVAVLLAHENLLENQRVKNGAFRKLIKDWMLEQYFNGIVLSSK
Ga0335031_0762620_3_167	3300034104	Freshwater	NLGQGCLQGFGSVAVLLAHENLLENQRVKKFAFRMLIKDWMPEQYCKRIVSASK
Ga0335035_0712872_307_513	3300034105	Freshwater	DFAFAQAHDGAFAKLFFNLGQGCLQGFGFVAVLVAHENLLENQRVKNDAFRKLIKDWMLEQYFNGIVL
Ga0335036_0047263_2_142	3300034106	Freshwater	GFGFVAVLVAHENLLENQRVKNGAFRKLIKDWMLEQYFNGIVLSSK
Ga0335068_0130200_2_139	3300034116	Freshwater	CLQGFGSVAVLLAHENLLENQRVKKFAFRMLIKDWMLEQYCNGIV
Ga0335053_0030572_3669_3884	3300034118	Freshwater	DFAFAQTHDSAFAELFFNLGQGCLQGFGSVAVLLAHENLLENQRVKKFALRMLIKDWMLEQYCKRIVSGSK
Ga0335058_0017340_1_216	3300034121	Freshwater	DFAFAQAHDGAFAKLFFNLGQGCLQGFGFVAVLLAHENLLENQRVKNGASRKLIKDWMLEQYCNGIVLARK
Ga0335058_0018542_4019_4153	3300034121	Freshwater	LQGFGSVAVLLAHENLLENQRVKKFAFRMLIKDWMLEQYCNGIV
Ga0335058_0593512_474_620	3300034121	Freshwater	LQGFGFVAVLLAHENLLENQRVENGASRKLIKDWMLEQYFNSIVLSSK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070024

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences