Metagenome Family F070011

Basic Information
Family ID	F070011
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	44 residues
Representative Sequence	MNIFALDKCPMQSALWLDDIRKNKMILESAQMLSTAVRWLDPDT
Number of Associated Samples	92
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	98.37 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	91.87 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (67.480 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (28.455 % of family members)
Environment Ontology (ENVO)	Unclassified (77.236 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (96.748 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64 1DelMOSum2010_102802981 2DelMOSum2011_101506301 3P_2C_Liq_1_UnCtyDRAFT_10342071 4Ga0068511_10353333 5Ga0068511_10390602 6Ga0075478_101393461 7Ga0075478_101467361 8Ga0098038_10686174 9Ga0098038_10780634 10Ga0098038_12010253 11Ga0098038_12399361 12Ga0098038_12871692 13Ga0098037_10762014 14Ga0098037_11516851 15Ga0098037_12231551 16Ga0098037_12424742 17Ga0098037_12560801 18Ga0098042_10503755 19Ga0098042_10755273 20Ga0098042_10806481 21Ga0098042_10972341 22Ga0098042_11027003 23Ga0098042_11173163 24Ga0098042_11476592 25Ga0098048_11166543 26Ga0075476_101257561 27Ga0075476_101955943 28Ga0070750_1002017010 29Ga0070750_102436591 30Ga0070750_103515012 31Ga0070746_100597507 32Ga0070746_101972603 33Ga0070748_11993273 34Ga0098046_10550273 35Ga0075468_102518932 36Ga0070747_12405182 37Ga0070752_12881161 38Ga0070753_11743823 39Ga0099851_12167841 40Ga0102945_10320322 41Ga0115545_12392411 42Ga0115546_12328983 43Ga0098056_11852622 44Ga0129348_13077661 45Ga0129324_104024782 46Ga0160423_101863955 47Ga0181391_10966352 48Ga0181412_10711502 49Ga0181401_11308143 50Ga0181419_11212033 51Ga0181427_11144862 52Ga0181389_11623032 53Ga0181393_10264281 54Ga0181382_11696772 55Ga0181414_12076732 56Ga0181408_10107534 57Ga0181413_10558651 58Ga0181565_102714623 59Ga0181607_101556785 60Ga0181577_105480411 61Ga0181577_105934912 62Ga0181580_102279501 63Ga0181582_107894452 64Ga0181585_105169771 65Ga0181569_105155661 66Ga0181567_105588571 67Ga0181592_102041935 68Ga0181591_105447523 69Ga0181591_107185153 70Ga0181566_109582451 71Ga0181568_103252085 72Ga0194024_10116026 73Ga0194022_10283552 74Ga0181575_104970852 75Ga0181574_103015233 76Ga0211506_11183733 77Ga0211678_102812921 78Ga0211576_102372281 79Ga0213858_105253901 80Ga0196883_10194043 81Ga0224898_1011111 82Ga0212025_10030685 83Ga0212025_10316671 84Ga0224906_10987391 85Ga0196887_10152561 86Ga0196887_10240321 87Ga0196887_10993431 88Ga0196891_10821771 89Ga0196901_10836151 90Ga0196901_11699262 91Ga0255752_102057174 92Ga0255781_104282182 93Ga0255774_100626911 94Ga0255751_100534241 95Ga0255751_101675955 96Ga0255762_103052971 97Ga0255768_104605881 98Ga0208667_10525643 99Ga0208791_10609511 100Ga0208298_10760703 101Ga0208157_10117141 102Ga0208157_10828491 103Ga0208159_10142861 104Ga0208666_11320721 105Ga0208013_10505121 106Ga0209535_10315066 107Ga0209535_10552181 108Ga0209348_11524991 109Ga0209232_11756122 110Ga0209232_12246191 111Ga0209645_11678562 112Ga0209645_12116973 113Ga0208148_10156214 114Ga0208643_10346481 115Ga0208898_10688003 116Ga0208162_11685512 117Ga0208150_10636034 118Ga0208899_11006761 119Ga0208427_11432702 120Ga0209193_11280523 121Ga0233450_103975651 122Ga0185543_10264951 123Ga0348336_174776_456_605
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64 1DelMOSum2010_102802981 2DelMOSum2011_101506301 3P_2C_Liq_1_UnCtyDRAFT_10342071 4Ga0070752_12881161 5Ga0102945_10320322 6Ga0098056_11852622 7Ga0208898_10688003
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64 1DelMOSum2010_102802981 2DelMOSum2011_101506301 3P_2C_Liq_1_UnCtyDRAFT_10342071 4Ga0070752_12881161 5Ga0102945_10320322 6Ga0098056_11852622 7Ga0208898_10688003
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.91% β-sheet: 4.55% Coil/Unstructured: 29.55%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF01710	HTH_Tnp_IS630	1.63
PF13671	AAA_33	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG3415	CRISPR-associated protein Csa3, CARF domain	Defense mechanisms [V]	1.63

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	32.52 %
Unclassified	root	N/A	67.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	6.50 %
Unclassified	root	N/A	67.48 %
Viruses	superkingdom	All Organisms → Viruses	26.02 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	6.50 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.76 %
Unclassified	root	N/A	67.48 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	2.44 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.63 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.81 %
Unclassified	root	N/A	67.48 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	2.44 %

Name	Rank	Taxonomy	Distribution
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.63 %
Unclassified	root	N/A	67.48 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	2.44 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.81 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.81 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.76 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.44 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.63 %
Unclassified	root	N/A	67.48 %

Name	Rank	Taxonomy	Distribution
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.76 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.44 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.63 %
Unclassified	root	N/A	67.48 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	0.81 %

Name	Rank	Taxonomy	Distribution
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.81 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.76 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.44 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.63 %
Unclassified	root	N/A	67.48 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000101\|DelMOSum2010_c10280298	Not Available	508	Open in IMG/M
3300000115\|DelMOSum2011_c10150630	Not Available	691	Open in IMG/M
3300000418\|P_2C_Liq_1_UnCtyDRAFT_1034207	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	958	Open in IMG/M
3300005057\|Ga0068511_1035333	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300005057\|Ga0068511_1039060	Not Available	753	Open in IMG/M
3300006026\|Ga0075478_10139346	Not Available	760	Open in IMG/M
3300006026\|Ga0075478_10146736	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300006735\|Ga0098038_1068617	All Organisms → Viruses → Predicted Viral	1257	Open in IMG/M
3300006735\|Ga0098038_1078063	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1163	Open in IMG/M
3300006735\|Ga0098038_1201025	Not Available	644	Open in IMG/M

Showing 1 to 10 of 123 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	1.63%
Marine	Environmental → Aquatic → Marine	97.56%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.81%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	28.46%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	19.51%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.63%
Oceanic	Environmental → Aquatic → Marine → Oceanic	30.89%
Pelagic	Environmental → Aquatic → Marine → Pelagic	2.44%
River	Environmental → Aquatic → Freshwater → River	1.63%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.81%
Strait	Environmental → Aquatic → Marine → Strait	10.57%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.06%

Habitat	Taxonomy	Distribution
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.81%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	19.51%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	30.08%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	28.46%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	10.57%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.06%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	2.44%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.63%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.63%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	26.02%
Enviromental	Environmental → Aquatic → Marine → Unclassified → Unclassified → Enviromental	0.81%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.63%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.63%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	28.46%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	3.25%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	1.63%
Marine Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water	1.63%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	2.44%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.81%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	19.51%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	10.57%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.81%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.81%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300000418	Marine microbial community from Union City, CA, USA - Pond 2C Liquid 1	Environmental	Open in IMG/M
3300005057	Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-0.2um	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006749	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006867	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA	Environmental	Open in IMG/M

Showing 1 to 10 of 92 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_102802981	3300000101	Marine	MNIFALDKCPMQSALWLDDIRKNKMILESAQMLSTAVRWLDPDTTLPVYK
DelMOSum2011_101506301	3300000115	Marine	MNIFALDKCPMQSALWLDDIRKNKMILESAQMLSTAV
P_2C_Liq_1_UnCtyDRAFT_10342071	3300000418	Enviromental	MNIIIFDEDPWQSALWLDDVRKSKFILEAAQMLSTAVRFNDPFTTLP
Ga0068511_10353333	3300005057	Marine Water	MNIFAFDKCPMRSALWLDDIRKNKMILESAQMLSTAVRALCPDTTLEVYKTAYLN
Ga0068511_10390602	3300005057	Marine Water	MNIFALDKCPMQSAQWLDDIRKNKMILESAQMLSTAVRVLCPDTDL
Ga0075478_101393461	3300006026	Aqueous	VNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIRTLCPDTSL
Ga0075478_101467361	3300006026	Aqueous	VNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIR
Ga0098038_10686174	3300006735	Marine	MNIFALDKCPMQSALWLDDIRKNKMILESAQMLSTAVRWLDPDTTLP
Ga0098038_10780634	3300006735	Marine	MNIFAFDKCPMQSALWLDDIRKNKMILESAQMLSTAVRWLDPDTTLP
Ga0098038_12010253	3300006735	Marine	MNIFAFDKCPMRSALWLDDIRKNKMILESAQMLSTAVRALCPDTTLEVYKSAYL
Ga0098038_12399361	3300006735	Marine	MNIFALDKCPMQSAQWLDDIRKNKMILESAQMLSTAVRVLSPDTD
Ga0098038_12871692	3300006735	Marine	MNIFALSRCPMQSAWWLDDIRKNKMILESAQMLSTAVRWL
Ga0098037_10762014	3300006737	Marine	MNIFALDKCPMQSALWLDDIRKNKMILESAQMLSTAVRWLD
Ga0098037_11516851	3300006737	Marine	MNIFAFDKCPMRSALWLDDIRKNKMILESAQMLSTAVRAL
Ga0098037_12231551	3300006737	Marine	MNIFAFDKCPMRSALWLDDIRKNKMILESAQMLSTAVRALCPDTTLEVYKSAY
Ga0098037_12424742	3300006737	Marine	MNIFAFDRCPMQSAQWLDDIRKNKMILESAQMLSTAVRWLDPDTALPV
Ga0098037_12560801	3300006737	Marine	MNIFAFDKCPMQSAVWLDDVRKNKMILESAQMLSTAVRWLDPDTTLPVYKL
Ga0098042_10503755	3300006749	Marine	MNIFAFDKCPMRSALWLDDIRKNKMILESAQMLSTAV
Ga0098042_10755273	3300006749	Marine	MNIFALSRCPMQSAWWLDDIRKNKMILKSVQMLSTAVRILCPDTDL
Ga0098042_10806481	3300006749	Marine	MNIFALDKCPMQSAQWLDDIRKNKMILESAQMLSTAVRILCPDTDLSVYKV
Ga0098042_10972341	3300006749	Marine	MNIFALSRCPMQSAWWLDDIRKNKMILESAQMLSTAVRWLD
Ga0098042_11027003	3300006749	Marine	MNIFAFDKCPMRSALWLDDIRKNKMILESAQMLSTAVRALCPDTTLE
Ga0098042_11173163	3300006749	Marine	MNIFAFDKCPMRSALWLDDIRKNKMILESAQMLSTAVRALCPDTTLEVYKSAYLN
Ga0098042_11476592	3300006749	Marine	MNIFAFDKCPMQSAQWLDDIRKNKMILESAQMLSTAVRWLDPDTALP
Ga0098048_11166543	3300006752	Marine	MNIFALSRCPMQSAWWLDDIRKNKMILESAQMLSTAVRWLDPDTTLPI
Ga0075476_101257561	3300006867	Aqueous	MNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIRTLCPDTS
Ga0075476_101955943	3300006867	Aqueous	VNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIRTL
Ga0070750_1002017010	3300006916	Aqueous	MNIFAFDKCPMQSAQWLDDIRKNKMILESAQMLSTAVRWLDPD
Ga0070750_102436591	3300006916	Aqueous	MNIFALDKCPMQSAWWLDDIRKNKMILESAQMLSTAV
Ga0070750_103515012	3300006916	Aqueous	MNIFALSECPMQSALWLDDVRKNKMILESAQMLSTAVRWLD
Ga0070746_100597507	3300006919	Aqueous	MNIFALSRCPMQSAQWLDDIRKNKMILESAQMLSTAVRWLDPDT
Ga0070746_101972603	3300006919	Aqueous	MNIFALDKCPMQSAQWLDDIRKNKMILESAQMLSTAVRVL
Ga0070748_11993273	3300006920	Aqueous	MNIFALDKCPMQSALWLDDIRKNKMILESAQMLSTAVRWLDPDTTL
Ga0098046_10550273	3300006990	Marine	MNIFALDKCPMQSAWWLDDIRKNKMILESAQMLSTAVRVLSPDTD
Ga0075468_102518932	3300007229	Aqueous	MNIFALDKCPMQSALWLDDIRKNKMILESAQMLSTAVRWLDPDT
Ga0070747_12405182	3300007276	Aqueous	MNIFALDKCPMQSALWLDDIRKNKMILESAQMLSTA
Ga0070752_12881161	3300007345	Aqueous	VNIFCFDTSPYLSALWLDDVRKNKMILESSQLLSTAIDFNDP
Ga0070753_11743823	3300007346	Aqueous	VNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIRTLCPDTSLPVYRVAYL
Ga0099851_12167841	3300007538	Aqueous	VNIFALDQCPMQSALWLDDIRKNKMILESAQMLSTAV
Ga0102945_10320322	3300007609	Pond Water	MLAVGARDMNLFAFDPDPWASALWLDDVRKNKMVLEAAQMLSTAVRFNDPFTTLPVYKAA
Ga0115545_12392411	3300009433	Pelagic Marine	MNIFAFDKCPMRSALWLDDIRKNKMILESAQMLSTAVRALCPDTTLEVYKS
Ga0115546_12328983	3300009435	Pelagic Marine	MNIFAFDKCPMRSALWLDDIRKNKMILESAQMLSTAVRALCPDTTLEVYKSA
Ga0098056_11852622	3300010150	Marine	MQSAWWLDDIRKNKMILESAQMLSTAVRWLDPDTTLPVYKLAYMN
Ga0129348_13077661	3300010296	Freshwater To Marine Saline Gradient	MNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIRTLCPD
Ga0129324_104024782	3300010368	Freshwater To Marine Saline Gradient	MNIFALSRCPMQSAWWLDDIRKNKMILESAQMLSTAVRWLDP
Ga0160423_101863955	3300012920	Surface Seawater	MNIFALDKCPMQSAQWLDDIRKNKMILESAQMLSTAVRILC
Ga0181391_10966352	3300017713	Seawater	MNIFALSRCPMQSAWWLDDIRKNKMILESAQMLSTAVRLLSGTL
Ga0181412_10711502	3300017714	Seawater	MNIFALDKCPMQSALWLDDIRKNKMILESAQMLSTAVRWLDPDTTLPV
Ga0181401_11308143	3300017727	Seawater	MNIFALSRCPMQSAWWLDDIRKNKMILESAQMLSTAVRLLSGTLI
Ga0181419_11212033	3300017728	Seawater	MNIFALSRCPMQSAWWLDDIRKNKMILESAQMLSTAVRVLSPDTD
Ga0181427_11144862	3300017745	Seawater	MNIFALDKCPMQSAWWLDDIRKNKMILESAQMLSTAVRVLSPDT
Ga0181389_11623032	3300017746	Seawater	MNIFAFDKCPMRSALWLDDIRKNKMILESAQMLSTAVRALCP
Ga0181393_10264281	3300017748	Seawater	MNIFALDKCPMQSALWLDDIRKNKMILESAQMLSTAVRW
Ga0181382_11696772	3300017756	Seawater	MNIFAFDPCPFQSALWLDDIRKNKMILESAQMLSTAVRWLDPDTNLQVY
Ga0181414_12076732	3300017759	Seawater	MNIFALSRCPMQSAWWLDDIRKNKMILESAQMLSTAVRVLSPDTDLSVYKVAYL
Ga0181408_10107534	3300017760	Seawater	MNIFALSRCPMQSAWWLDDIRKNKMILESAQMLSTAVRWLDPDTT
Ga0181413_10558651	3300017765	Seawater	MNIFAFDKCPMQSALWLDDIRKNKMILESAQMLSTAVRWLDPDTTL
Ga0181565_102714623	3300017818	Salt Marsh	MNIFALSECPEQSALWLDDIRKNKMILESAQMLSTA
Ga0181607_101556785	3300017950	Salt Marsh	MNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIRTLQ
Ga0181577_105480411	3300017951	Salt Marsh	MNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIRTLC
Ga0181577_105934912	3300017951	Salt Marsh	MNIFALSECPMQSALWLDDVRKNKMILESAQMLST
Ga0181580_102279501	3300017956	Salt Marsh	VNIFALSECPEQSALWLDDIRKNKMILESAQMLSTA
Ga0181582_107894452	3300017958	Salt Marsh	MNIFALDQCPMQSALWLDDIRKNKMILESAQMLSTAVRTLCPDTDL
Ga0181585_105169771	3300017969	Salt Marsh	MNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIRTLCPDTSLP
Ga0181569_105155661	3300017986	Salt Marsh	MNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIRTL
Ga0181567_105588571	3300018418	Salt Marsh	MNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIRT
Ga0181592_102041935	3300018421	Salt Marsh	VNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIRTLCPDTSLPVYR
Ga0181591_105447523	3300018424	Salt Marsh	VNIFALSECPMQSALWLDDVRKNKMILESAQMLSTAVRWLD
Ga0181591_107185153	3300018424	Salt Marsh	MNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIRTLCPDTSLPVYRVAYLN
Ga0181566_109582451	3300018426	Salt Marsh	VNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIRW
Ga0181568_103252085	3300018428	Salt Marsh	MNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIRTLCPDTSLPVYRVAYL
Ga0194024_10116026	3300019765	Freshwater	VNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAI
Ga0194022_10283552	3300019937	Freshwater	VNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIRTLCPDTSLP
Ga0181575_104970852	3300020055	Salt Marsh	MNIFALDKCPMQSAQWLDDIRKNKMILESAQMLSTAVRVLCPDTDLS
Ga0181574_103015233	3300020056	Salt Marsh	MNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIRTLCP
Ga0211506_11183733	3300020365	Marine	MNIFAFDKCPMQSAQWLDDIRKNKMILESAQMLSTAVRW
Ga0211678_102812921	3300020388	Marine	MNIFALSECPEQSALWLDDIRKNKMILESAQMLSTTVRHLT
Ga0211576_102372281	3300020438	Marine	MNIFALDECPMQSALWLDDIRKNKMILESAQMLST
Ga0213858_105253901	3300021356	Seawater	MNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIRTLCPDTSLPV
Ga0196883_10194043	3300022050	Aqueous	MNIFALSECPEQSALWLDDIRKNKMILESAQMLSTTVRHLTPDTDLPVYRVAYLN
Ga0224898_1011111	3300022055	Seawater	MNIFALSRCPMQSAWWLDDIRKNKMILESAQMLST
Ga0212025_10030685	3300022057	Aqueous	VNIFALDQCPMQSALWLDDIRKNKMILESAQMLSTAVRTLCPDTNLEVYRVA
Ga0212025_10316671	3300022057	Aqueous	MNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIRTLCPDTSLPVYRVAL
Ga0224906_10987391	3300022074	Seawater	MNIFALDRCPMQSAQWLDDIRKNKMILESAQMLSTAVRVLSPDTNLSV
Ga0196887_10152561	3300022178	Aqueous	MNIFALDKCPMQSALWLDDIRKNKMILESAQMLSTAVRWLDPDTTLPVYKL
Ga0196887_10240321	3300022178	Aqueous	MNIFALDKCPMQSAWWLDDIRKNKMILESAQMLSTAVRVLSPDTDLS
Ga0196887_10993431	3300022178	Aqueous	MNIFAFDKCPMQSALWLDDIRKNKMILESAQMLSTAVRTLCPDTDLGVYRVAY
Ga0196891_10821771	3300022183	Aqueous	MNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIRTLCPDTSLPVYRVA
Ga0196901_10836151	3300022200	Aqueous	VNIFALDQCPMQSALWLDDIRKNKMILESAQMLSTAVRTLCPDT
Ga0196901_11699262	3300022200	Aqueous	MNIFALDQCPMQSALWLDDIRKNKMILESAQMLSTAVRTLCPDT
Ga0255752_102057174	3300022929	Salt Marsh	MNIFAFDKCPMQSALWLDDVRKNKMILESAQMLSTAVRWLNPDTTL
Ga0255781_104282182	3300022934	Salt Marsh	MNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAI
Ga0255774_100626911	3300023087	Salt Marsh	MNIFALSECPEQSALWLDDIRKNKMILESAQMLST
Ga0255751_100534241	3300023116	Salt Marsh	MNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIRTLCPDTSLPVYR
Ga0255751_101675955	3300023116	Salt Marsh	VNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIRTLC
Ga0255762_103052971	3300023119	Salt Marsh	MNIFAFDKCPMQSALWLDDVRKNKMILESAQMLSTAVR
Ga0255768_104605881	3300023180	Salt Marsh	VNIFALDQCPMQSALWLDDIRKNKMILESAQMLSTAVRTLCPD
Ga0208667_10525643	3300025070	Marine	VNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIRTLCPDTDL
Ga0208791_10609511	3300025083	Marine	VNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIRTLCPDTDLSVYR
Ga0208298_10760703	3300025084	Marine	MNIFALDKCPMQSAQWLDDIRKNKMILESAQMLST
Ga0208157_10117141	3300025086	Marine	MNIFALDKCPMQSAQWLDDIRKNKMILESAQMLSTAVRVLS
Ga0208157_10828491	3300025086	Marine	MNIFAFDKCPMRSALWLDDIRKNKMILESAQMLSTAVRALC
Ga0208159_10142861	3300025101	Marine	MNIFALSRCPMQSAWWLDDIRKNKMILESAQMLSTAV
Ga0208666_11320721	3300025102	Marine	MNIFAFDKCPMRSALWLDDIRKNKMILESAQMLSTA
Ga0208013_10505121	3300025103	Marine	MNIFALSECPEQSALWLDDIRKNKMILESAQMLSTT
Ga0209535_10315066	3300025120	Marine	MNIFALDKCPMQSALWLDDIRKNKMILESAQMLSTAVRWL
Ga0209535_10552181	3300025120	Marine	MNIFALSRCPMQSAWWLDDIRKNKMILESAQMLSTAVR
Ga0209348_11524991	3300025127	Marine	MNIFAFDKCPMQSAQWLDDIRKNKMILESAQMLSTAV
Ga0209232_11756122	3300025132	Marine	MNIFAFDKCPMQSAQWLDDIRKNKMILESAQMLSTAVRIL
Ga0209232_12246191	3300025132	Marine	MNIFALDKCPMQSAQWLDDIRKNKMILESAQMLSTAVRIL
Ga0209645_11678562	3300025151	Marine	MNIFALDKCPMQSAQWLDDIRKNKMILESAQMLSTAV
Ga0209645_12116973	3300025151	Marine	MNIFALDKCPMQSAQWLDDIRKNKMILESAQMLSTAVR
Ga0208148_10156214	3300025508	Aqueous	MNIFALDKCPMQSALWLDDIRKNKMILESAQMLSTAVR
Ga0208643_10346481	3300025645	Aqueous	MNIFALDKCPMQSALWLDDIRKNKMILESAQMLSTAVRWLDPD
Ga0208898_10688003	3300025671	Aqueous	VNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIRTLCPDT
Ga0208162_11685512	3300025674	Aqueous	VNIFALDQCPMQSALWLDDIRKNKMILESAQMLSTAVRTLCP
Ga0208150_10636034	3300025751	Aqueous	VNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIRTLCP
Ga0208899_11006761	3300025759	Aqueous	VNIFALDQCPMQSALWLDDIRKNKMILESAQMLSTAVRTLCPDTDLEVYRVAY
Ga0208427_11432702	3300025771	Aqueous	VNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIRTLCPDTSLPVYRVAYLNH
Ga0209193_11280523	3300025816	Pelagic Marine	MNIFAFDKCPMRSALWLDDIRKNKMILESAQMLSTAVRALCPDTTLEVYK
Ga0233450_103975651	3300028115	Salt Marsh	MNIFAFDKCPMQSALWLDDVRKNKMILESAQMLSTAVRWLNP
Ga0185543_10264951	3300029318	Marine	MNIFALSRCPMQSAQWLDDIRKNKMILESAQMLSTAVRWLDP
Ga0348336_174776_456_605	3300034375	Aqueous	MNIFALSECPEQSALWLDDIRKNKMILESAQMLSTAIRTLCPDTKLKVYK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F070011

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences