NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F069955

Metagenome / Metatranscriptome Family F069955

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F069955
Family Type Metagenome / Metatranscriptome
Number of Sequences 123
Average Sequence Length 51 residues
Representative Sequence MKSLIVALLLAMQVQGVAPNISGFSIQGTTVNLNSFKGKKNVLVVFYRTQA
Number of Associated Samples 104
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 59.35 %
% of genes near scaffold ends (potentially truncated) 24.39 %
% of genes from short scaffolds (< 2000 bps) 78.86 %
Associated GOLD sequencing projects 98
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(27.642 % of family members)
Environment Ontology (ENVO) Unclassified
(44.715 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(59.350 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 18.99%    β-sheet: 10.13%    Coil/Unstructured: 70.89%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF00578AhpC-TSA 41.46
PF00111Fer2 10.57
PF00849PseudoU_synth_2 8.94
PF01479S4 7.32
PF02578Cu-oxidase_4 7.32
PF01135PCMT 6.50
PF05199GMC_oxred_C 4.88
PF02843GARS_C 0.81
PF13618Gluconate_2-dh3 0.81
PF04892VanZ 0.81
PF02954HTH_8 0.81
PF08534Redoxin 0.81
PF00669Flagellin_N 0.81
PF00512HisKA 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG0564Pseudouridine synthase RluA, 23S rRNA- or tRNA-specificTranslation, ribosomal structure and biogenesis [J] 8.94
COG1187Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605Translation, ribosomal structure and biogenesis [J] 8.94
COG1496Copper oxidase (laccase) domainInorganic ion transport and metabolism [P] 7.32
COG2226Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenGCoenzyme transport and metabolism [H] 6.50
COG2518Protein-L-isoaspartate O-methyltransferasePosttranslational modification, protein turnover, chaperones [O] 6.50
COG2519tRNA A58 N-methylase Trm61Translation, ribosomal structure and biogenesis [J] 6.50
COG4122tRNA 5-hydroxyU34 O-methylase TrmR/YrrMTranslation, ribosomal structure and biogenesis [J] 6.50
COG2303Choline dehydrogenase or related flavoproteinLipid transport and metabolism [I] 4.88
COG0151Phosphoribosylamine-glycine ligaseNucleotide transport and metabolism [F] 0.81
COG1344Flagellin and related hook-associated protein FlgLCell motility [N] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000789|JGI1027J11758_12308061All Organisms → cellular organisms → Bacteria → Acidobacteria747Open in IMG/M
3300000956|JGI10216J12902_114397020All Organisms → cellular organisms → Bacteria841Open in IMG/M
3300002558|JGI25385J37094_10001186All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae8115Open in IMG/M
3300003324|soilH2_10165709All Organisms → cellular organisms → Bacteria1257Open in IMG/M
3300004281|Ga0066397_10073486All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria668Open in IMG/M
3300004463|Ga0063356_104740771All Organisms → cellular organisms → Bacteria → Proteobacteria585Open in IMG/M
3300004633|Ga0066395_10113103All Organisms → cellular organisms → Bacteria1327Open in IMG/M
3300005167|Ga0066672_10761567All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300005172|Ga0066683_10001832All Organisms → cellular organisms → Bacteria8870Open in IMG/M
3300005172|Ga0066683_10449760All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria790Open in IMG/M
3300005180|Ga0066685_10271671All Organisms → cellular organisms → Bacteria1171Open in IMG/M
3300005186|Ga0066676_10389355All Organisms → cellular organisms → Bacteria938Open in IMG/M
3300005187|Ga0066675_10333565All Organisms → cellular organisms → Bacteria1105Open in IMG/M
3300005332|Ga0066388_100134551All Organisms → cellular organisms → Bacteria3024Open in IMG/M
3300005332|Ga0066388_100205438All Organisms → cellular organisms → Bacteria2593Open in IMG/M
3300005332|Ga0066388_100212803All Organisms → cellular organisms → Bacteria2559Open in IMG/M
3300005446|Ga0066686_10069078All Organisms → cellular organisms → Bacteria2208Open in IMG/M
3300005447|Ga0066689_10313676All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria974Open in IMG/M
3300005450|Ga0066682_10481722All Organisms → cellular organisms → Bacteria → Acidobacteria787Open in IMG/M
3300005468|Ga0070707_100001590All Organisms → cellular organisms → Bacteria21987Open in IMG/M
3300005468|Ga0070707_100072374All Organisms → cellular organisms → Bacteria3322Open in IMG/M
3300005468|Ga0070707_100893518All Organisms → cellular organisms → Bacteria853Open in IMG/M
3300005471|Ga0070698_101262848All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300005536|Ga0070697_100257580All Organisms → cellular organisms → Bacteria1493Open in IMG/M
3300005554|Ga0066661_10412690All Organisms → cellular organisms → Bacteria827Open in IMG/M
3300005557|Ga0066704_10391735All Organisms → cellular organisms → Bacteria924Open in IMG/M
3300005558|Ga0066698_10382330All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria970Open in IMG/M
3300005558|Ga0066698_10995443All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria533Open in IMG/M
3300005559|Ga0066700_10215048All Organisms → cellular organisms → Bacteria1333Open in IMG/M
3300005561|Ga0066699_10451590All Organisms → cellular organisms → Bacteria920Open in IMG/M
3300005568|Ga0066703_10377275All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria851Open in IMG/M
3300005569|Ga0066705_10015058All Organisms → cellular organisms → Bacteria3829Open in IMG/M
3300005574|Ga0066694_10366489All Organisms → cellular organisms → Bacteria → Proteobacteria681Open in IMG/M
3300005577|Ga0068857_101892749All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300005586|Ga0066691_10618542All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300005587|Ga0066654_10085119All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1492Open in IMG/M
3300005598|Ga0066706_10353117All Organisms → cellular organisms → Bacteria1166Open in IMG/M
3300005764|Ga0066903_100250430All Organisms → cellular organisms → Bacteria2732Open in IMG/M
3300005764|Ga0066903_103063716All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria905Open in IMG/M
3300005937|Ga0081455_10414244All Organisms → cellular organisms → Bacteria931Open in IMG/M
3300006031|Ga0066651_10817231All Organisms → cellular organisms → Bacteria → Acidobacteria506Open in IMG/M
3300006791|Ga0066653_10006113All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3940Open in IMG/M
3300006796|Ga0066665_10266625All Organisms → cellular organisms → Bacteria1362Open in IMG/M
3300006796|Ga0066665_10653095All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300006844|Ga0075428_102283631All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300006852|Ga0075433_10418031All Organisms → cellular organisms → Bacteria1182Open in IMG/M
3300006852|Ga0075433_11693807All Organisms → cellular organisms → Bacteria → Proteobacteria545Open in IMG/M
3300006854|Ga0075425_100527883All Organisms → cellular organisms → Bacteria1359Open in IMG/M
3300006871|Ga0075434_100251869All Organisms → cellular organisms → Bacteria1785Open in IMG/M
3300006904|Ga0075424_100574552All Organisms → cellular organisms → Bacteria1204Open in IMG/M
3300007004|Ga0079218_12975562All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300009012|Ga0066710_100809022All Organisms → cellular organisms → Bacteria1437Open in IMG/M
3300009012|Ga0066710_100924105All Organisms → cellular organisms → Bacteria1344Open in IMG/M
3300009012|Ga0066710_100973692All Organisms → cellular organisms → Bacteria1308Open in IMG/M
3300009137|Ga0066709_100634200All Organisms → cellular organisms → Bacteria1527Open in IMG/M
3300009137|Ga0066709_101261007All Organisms → cellular organisms → Bacteria1086Open in IMG/M
3300009147|Ga0114129_10245203All Organisms → cellular organisms → Bacteria2407Open in IMG/M
3300009444|Ga0114945_10252187All Organisms → cellular organisms → Bacteria1032Open in IMG/M
3300009609|Ga0105347_1009547All Organisms → cellular organisms → Bacteria3356Open in IMG/M
3300009811|Ga0105084_1090861All Organisms → cellular organisms → Bacteria → Acidobacteria570Open in IMG/M
3300010046|Ga0126384_10029650All Organisms → cellular organisms → Bacteria3624Open in IMG/M
3300010114|Ga0127460_1118615All Organisms → cellular organisms → Bacteria → Acidobacteria780Open in IMG/M
3300010134|Ga0127484_1152118All Organisms → cellular organisms → Bacteria → Acidobacteria504Open in IMG/M
3300010141|Ga0127499_1006403All Organisms → cellular organisms → Bacteria → Acidobacteria852Open in IMG/M
3300010142|Ga0127483_1098472All Organisms → cellular organisms → Bacteria → Acidobacteria578Open in IMG/M
3300010304|Ga0134088_10000916All Organisms → cellular organisms → Bacteria10968Open in IMG/M
3300010322|Ga0134084_10017780All Organisms → cellular organisms → Bacteria → Acidobacteria1875Open in IMG/M
3300010366|Ga0126379_11241824All Organisms → cellular organisms → Bacteria → Acidobacteria851Open in IMG/M
3300010397|Ga0134124_10084526All Organisms → cellular organisms → Bacteria2735Open in IMG/M
3300010398|Ga0126383_13226317All Organisms → cellular organisms → Bacteria → Acidobacteria533Open in IMG/M
3300011416|Ga0137422_1004388All Organisms → cellular organisms → Bacteria3141Open in IMG/M
3300011420|Ga0137314_1015645All Organisms → cellular organisms → Bacteria1927Open in IMG/M
3300012039|Ga0137421_1018308All Organisms → cellular organisms → Bacteria1684Open in IMG/M
3300012198|Ga0137364_10392018All Organisms → cellular organisms → Bacteria1039Open in IMG/M
3300012199|Ga0137383_10020029All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4616Open in IMG/M
3300012205|Ga0137362_11209515All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300012207|Ga0137381_10007101All Organisms → cellular organisms → Bacteria8355Open in IMG/M
3300012207|Ga0137381_10048861All Organisms → cellular organisms → Bacteria3487Open in IMG/M
3300012285|Ga0137370_10602819All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300012349|Ga0137387_10078197All Organisms → cellular organisms → Bacteria2268Open in IMG/M
3300012356|Ga0137371_10295325All Organisms → cellular organisms → Bacteria → Acidobacteria1263Open in IMG/M
3300012922|Ga0137394_11117613All Organisms → cellular organisms → Bacteria → Acidobacteria652Open in IMG/M
3300012948|Ga0126375_11044792All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300014154|Ga0134075_10503425All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium543Open in IMG/M
3300014878|Ga0180065_1134852All Organisms → cellular organisms → Bacteria → Acidobacteria568Open in IMG/M
3300015359|Ga0134085_10530902All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300015371|Ga0132258_10015101All Organisms → cellular organisms → Bacteria16489Open in IMG/M
3300015371|Ga0132258_13406601All Organisms → cellular organisms → Bacteria → Acidobacteria1092Open in IMG/M
3300015372|Ga0132256_102182663All Organisms → cellular organisms → Bacteria → Acidobacteria658Open in IMG/M
3300017656|Ga0134112_10257966All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300017657|Ga0134074_1052455All Organisms → cellular organisms → Bacteria1379Open in IMG/M
3300017659|Ga0134083_10279826All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium704Open in IMG/M
3300018082|Ga0184639_10650596All Organisms → cellular organisms → Bacteria → Acidobacteria511Open in IMG/M
3300018431|Ga0066655_10055697All Organisms → cellular organisms → Bacteria2058Open in IMG/M
3300018431|Ga0066655_10143437All Organisms → cellular organisms → Bacteria → Acidobacteria1407Open in IMG/M
3300018431|Ga0066655_10227905All Organisms → cellular organisms → Bacteria1173Open in IMG/M
3300018433|Ga0066667_10009930All Organisms → cellular organisms → Bacteria4517Open in IMG/M
3300018482|Ga0066669_10251867All Organisms → cellular organisms → Bacteria1397Open in IMG/M
3300019233|Ga0184645_1042385All Organisms → cellular organisms → Bacteria → Acidobacteria529Open in IMG/M
3300022195|Ga0222625_1013922All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300022563|Ga0212128_10926937All Organisms → cellular organisms → Bacteria → Acidobacteria512Open in IMG/M
3300025159|Ga0209619_10570876All Organisms → cellular organisms → Bacteria → Acidobacteria547Open in IMG/M
3300025314|Ga0209323_10501289All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes708Open in IMG/M
3300025322|Ga0209641_11070353All Organisms → cellular organisms → Bacteria → Acidobacteria517Open in IMG/M
3300025324|Ga0209640_10751661All Organisms → cellular organisms → Bacteria → Acidobacteria772Open in IMG/M
3300025922|Ga0207646_10145710All Organisms → cellular organisms → Bacteria2134Open in IMG/M
3300025922|Ga0207646_11858442All Organisms → cellular organisms → Bacteria → Acidobacteria514Open in IMG/M
3300026277|Ga0209350_1047853All Organisms → cellular organisms → Bacteria1244Open in IMG/M
3300026306|Ga0209468_1058441All Organisms → cellular organisms → Bacteria1300Open in IMG/M
3300026324|Ga0209470_1000465All Organisms → cellular organisms → Bacteria32289Open in IMG/M
3300026324|Ga0209470_1381071All Organisms → cellular organisms → Bacteria → Acidobacteria504Open in IMG/M
3300026331|Ga0209267_1097210All Organisms → cellular organisms → Bacteria1256Open in IMG/M
3300026536|Ga0209058_1105536All Organisms → cellular organisms → Bacteria → Acidobacteria1416Open in IMG/M
3300026547|Ga0209156_10201698All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium947Open in IMG/M
3300027324|Ga0209845_1044627All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium702Open in IMG/M
3300027748|Ga0209689_1116872All Organisms → cellular organisms → Bacteria1347Open in IMG/M
3300027909|Ga0209382_10286067All Organisms → cellular organisms → Bacteria1862Open in IMG/M
3300027909|Ga0209382_11186540All Organisms → cellular organisms → Bacteria → Acidobacteria782Open in IMG/M
3300031740|Ga0307468_100217200All Organisms → cellular organisms → Bacteria1311Open in IMG/M
3300031910|Ga0306923_11870234All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium614Open in IMG/M
3300031954|Ga0306926_11145379All Organisms → cellular organisms → Bacteria917Open in IMG/M
3300032421|Ga0310812_10059430All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter1494Open in IMG/M
3300033433|Ga0326726_10552826All Organisms → cellular organisms → Bacteria → Acidobacteria1104Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil27.64%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil9.76%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil8.94%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.32%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere7.32%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil5.69%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.69%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil4.06%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.25%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.63%
Thermal SpringsEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs1.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.63%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil1.63%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.63%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.63%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.81%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.81%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.81%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.81%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.81%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.81%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.81%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.81%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000789Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004281Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBioEnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009444Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3EnvironmentalOpen in IMG/M
3300009609Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890EnvironmentalOpen in IMG/M
3300009811Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010114Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010134Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010141Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010142Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011416Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT551_2EnvironmentalOpen in IMG/M
3300011420Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2EnvironmentalOpen in IMG/M
3300012039Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014878Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200A_16_10DEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019233Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022195Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022563OV2_combined assemblyEnvironmentalOpen in IMG/M
3300025159Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3EnvironmentalOpen in IMG/M
3300025314Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 2EnvironmentalOpen in IMG/M
3300025322Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026306Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300027324Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J11758_1230806123300000789SoilMKSLVFALLLAFQVQGVAPNITGFSVQGETVNLNSXKGKXPVLVVFYRTQA*
JGI10216J12902_11439702013300000956SoilMKSLVFALLLAFQVQGVAPNITGFSVQGETVNLNSLKGKKPVLVVFYRTQA*
JGI25385J37094_1000118643300002558Grasslands SoilMKSLIVALLLAMQVQGVAPNISGFSIQGTTINLNSFKGKKTVLVVFYRTQA*
soilH2_1016570923300003324Sugarcane Root And Bulk SoilMKSLILTLLLAFQGAALQSVAPNISGFSIQGSTVNLSSFKGKKPVLVVFYRTQA*
Ga0066397_1007348623300004281Tropical Forest SoilMKSLAFALLLAFQVQGVAPNITGFSVQGETVNLNSFKGKKPVLVVFYRTQA*
Ga0063356_10474077123300004463Arabidopsis Thaliana RhizosphereMKSVFAVLLLALQVQSVAPKIAGFSIQGTTVNLDQYKGKKNVLVVFYRTQA*
Ga0066395_1011310313300004633Tropical Forest SoilMKSLVFALLLAFQVQGVAPNITGFSVQGETVNLNSFKGKKPVLVVFYRTQA*
Ga0066672_1076156713300005167SoilMKSLIVALLLAMQVQGVAPNISGFSIQGTTVNLNSFKGKKSVLVVFYRTQA*
Ga0066683_1000183283300005172SoilMKSLLLTVLLALQVQGVAPQITGFAIQGVTVNLNSYRGKKPVLVVFYRTQA*
Ga0066683_1044976023300005172SoilMKSLMVALLLAMQVQGVAPNISGFSIQGTTVNLNSFKGKKSVLVVFYRTQA*
Ga0066685_1027167113300005180SoilMNSLIVALLLAMQVQGVAPNIMGFSIQGTTVNLNSFKGNKSVLVVFYRTQA*
Ga0066676_1038935523300005186SoilVRSFVLTLLLALQIQGVAPQITGFAIQGVTVNLNSYKGKKNVLVVFYRTQA*
Ga0066675_1033356513300005187SoilPRLVGYAPMNSLIVALLLAMQVQGVAPNIMGFSIQGTTVNLNSFKGNKSVLVVFYRTQA*
Ga0066388_10013455153300005332Tropical Forest SoilMRSLVFALLLAFQVQGVAPNITGFSVQGETVNLNSFKGKKPVLVVFYRTQA*
Ga0066388_10020543843300005332Tropical Forest SoilMKSLVFALLLAFQAQGVAPNISGFSVQGTTVNLNSFKGKKPVLVVFYRTEA*
Ga0066388_10021280333300005332Tropical Forest SoilMKSLVISIFLLFQAQGVAPNISGFSIQGTTVNLNSFKGKKPVLVVFYRTQA*
Ga0066686_1006907833300005446SoilMKSLIFALLLAFQVQGVAPNISGFSVQGTTVNLNSFKGKKPVLVVFYRTQA*
Ga0066689_1031367623300005447SoilMNSLTVALLLAMQVQGVAPNIMGFSIQGTTVNLNSFKGKKSVLVVFYRTEA*
Ga0066682_1048172223300005450SoilMKSLVFALLLGLQGVQVQEVAPNITGFSIQGTTVNLNLFKGKKPVLVVFYRTQA*
Ga0070707_100001590153300005468Corn, Switchgrass And Miscanthus RhizosphereMNSLIVALLLAMQVQGVAPNIMGFSIQGTTVNLNSFKGKKNVLVVFYRTQA*
Ga0070707_10007237443300005468Corn, Switchgrass And Miscanthus RhizosphereMNSLIIALLLAMQVQGVAPNIMGFSIQGTTVNLNSFKGKKAVLVVFYRTQA*
Ga0070707_10089351823300005468Corn, Switchgrass And Miscanthus RhizosphereMKSLILALLLAFQVEGAAPNISGFSVQGTTVNLSSFKGKKPVLVVFYRTQA*
Ga0070698_10126284813300005471Corn, Switchgrass And Miscanthus RhizosphereMKSLVFALLLAFQVQGVAPNISGFSVQGETVNLNSFKGKKPVLVVFYRTQA*
Ga0070697_10025758033300005536Corn, Switchgrass And Miscanthus RhizosphereMNSLIVALLLAMQVQGVAPNIMGFSIQGTTVNLNSFKGKKAVLVVFYRTQA*
Ga0066661_1041269023300005554SoilMNSLIIALLLVMQVQGVAPNIMGFSIQGTTVNLNSFKGNKSVLVVFYRTQA*
Ga0066704_1039173523300005557SoilMKSLIVALLLAMQVQGVAPNISGFSIQGMTINLNSFKGKKTVLVVFYRTQA*
Ga0066698_1038233013300005558SoilMKSLIVALLLAMQVQGVAPNISGFSIQGTTVNLNSFKGKKNVLVVFYRTQA*
Ga0066698_1099544313300005558SoilVKSFLLTVLLALQVQGVAPQITGFAIQGVTVNLNSYKGKKSVLVVFYRTQA*
Ga0066700_1021504833300005559SoilMNSLIVALLLVMQVQGVAPNIMGFSIQGTTVNLNSFKGNKSVLVVFYRTQA*
Ga0066699_1045159023300005561SoilMNSLIVALLLVMQVQGVAPNIMGFSIQGTTVNLNSFKGKKSVLVVFYRTEA*
Ga0066703_1037727523300005568SoilMVALLLAMQVQGVAPNISGFSIQGTTVNLNSFKGKKSVLVVFYRTQA*
Ga0066705_1001505863300005569SoilLLLAMQVQGVAPNISGFSIQGTTINLNSFKGKKTVLVVFYRTQA*
Ga0066694_1036648933300005574SoilLLLTVLLALQVQGVAPQITGFAIQGVTVNLNSYRGKKPVLVVFYRTQA*
Ga0068857_10189274913300005577Corn RhizosphereMKSLILALLLAFQVSGVAPNISGFSIQGTSVNLNSFKGKKPVLVVFYRTQA*
Ga0066691_1061854213300005586SoilMKSLIVALLLAMQVQAVAPNISGFSIQGTTVNLNSFKGKKNVLVVFY
Ga0066654_1008511933300005587SoilGCVPMKSLIVALLLAMQVQGVAPNISGFSIQGTTINLNSFKGKKTVLVVFYRTQA*
Ga0066706_1035311733300005598SoilMNSLIVALLLAMQVQGVAPNIMGFSIQGTTVNLNSFKGKKSVLVVFYRTEA*
Ga0066903_10025043033300005764Tropical Forest SoilMKSLILALLLAFQAQGIAPNITGFSIQGESVNLNSFKGKKPVLVVFYRTQA*
Ga0066903_10306371623300005764Tropical Forest SoilMKSLIVTLLLAFQIQGIAPNITGFSVQGTTVNLSAFKGKKPVLVVFYRTQA*
Ga0081455_1041424423300005937Tabebuia Heterophylla RhizosphereMKSLVLALLLAFQAAQGVAPNISGFSIQGTTVSLNSFKGKKPVLVVFYRTEA*
Ga0066651_1081723113300006031SoilLLTVLLALQVQGVAPQITGFAIQGVTVNLNSYRGKKPVLVVFYRTQA*
Ga0066653_1000611353300006791SoilMKSLIVALLLAMQVQGVAPNISGFSIQGTTINLNSFKGKKNVLVVFYRTQA*
Ga0066665_1026662533300006796SoilMKSLIVGLLLAMQVQGVAPNISGFSIQGTTINLNSFKGKKNVLVVFYRTQA*
Ga0066665_1065309533300006796SoilVPMKSLIVALLLAMQVQGVAPNISGFSIQGTTINLNSFKGKKNVLVVFYRTQA*
Ga0075428_10228363123300006844Populus RhizosphereMKTLVFALLLALQAPVVAPNISGFAVQGTTVNLNSFKGKKPVLVVFYRTEA*
Ga0075433_1041803123300006852Populus RhizosphereMKSFVFALLLMFQAQGVAPNISGFSIQGTTVNLNSFKGKKPVLVVFYRTQA*
Ga0075433_1169380713300006852Populus RhizosphereMKSLVFALLLAFQVQGVAPNITGFSVQGETVNLNSFKDKKPVLVVFYRTQA*
Ga0075425_10052788333300006854Populus RhizosphereMNSLIVALLLTMQVQGVAPNIMGFSIQGTTVNLNSFKGKKSVLVVFYRTQA*
Ga0075434_10025186913300006871Populus RhizosphereMKSLVISIFLLFQAQGVAPNISGFSIQGTTVNLNSFKGKKPVLVVFYQTQA*
Ga0075424_10057455243300006904Populus RhizosphereQRHTGGCVTIWLMKSLILALLLAFQAQGIAPNITGFSIQGESVNLNSFKGKKPVLVVFYRTQA*
Ga0079218_1297556223300007004Agricultural SoilMKTLVFALLFALQAQTPTVAPNVGGFSVQGTTVNLSQFKGKKPVLVVFYRTQG*
Ga0066710_10080902223300009012Grasslands SoilMKSLIVALLLAMQVQGVAPNISGFSIQGTTVNLNSFKGKKNVLVVFYRTQA
Ga0066710_10092410523300009012Grasslands SoilMNSLIIALLLVMQVQGVAPNIMGFSIQGTTVNLNSFKGNKSVLVVFYRTQA
Ga0066710_10097369223300009012Grasslands SoilVRSFVLTLLLALQVQGVAPQITGFAIQGVTVNLNSYKGKKNVLVVFYRTQA
Ga0066709_10063420033300009137Grasslands SoilMNSLIVALLLVMQVQGVAPNIMGFSIQGTTGNLNSIKGNKSVLVVFYRT*
Ga0066709_10126100723300009137Grasslands SoilVRSFVLTLLLALQVQGVAPQITGFAIQGVTVNLNSYKGKKNVLVVFYRTQA*
Ga0114129_1024520333300009147Populus RhizosphereMKSVVLSLLFMLQVQGVAPLFSGFSIQGTTINLSYYKGKQNVLVVFYRTQG*
Ga0114945_1025218723300009444Thermal SpringsMKLLLAFVLLLQVKGIAPPITGFSIQGTTVSLNSYKGKQNVLVVFYRTQA*
Ga0105347_100954753300009609SoilMKSLVFALLLALQAQTPAVAPNVGGFSVQGSTVNLIQFKGKKPVLVVFYRTQG*
Ga0105084_109086123300009811Groundwater SandMKALVIALLLAFQVQGVAPKITGFSIQGTSVSLEYYKGKKSVLVVFYRTQA*
Ga0126384_1002965043300010046Tropical Forest SoilMKSIVFALLLAFQVQGVAPNITGFSVQGETVNLNSFKGKKPVLVVFYRTQA*
Ga0127460_111861533300010114Grasslands SoilLLLAMQVQGVAPNISGFSIQGTTINLNSFKGKKNVLVVFYRTQA*
Ga0127484_115211813300010134Grasslands SoilKSLIVALLLAMQVQGVAPNISGFSIQGTTINLNSFKGKKNVLVVFYRTQA*
Ga0127499_100640333300010141Grasslands SoilALLLAMQVQGVAPNISGFSIQGTTVSLNSFKGKKNVLVVFYRTQA*
Ga0127483_109847233300010142Grasslands SoilLAMQVQGVAPNISGFSIQGTTINLNSFKGKKNVLVVFYRTQA*
Ga0134088_1000091683300010304Grasslands SoilMKSLIVALLLAMQVQGVAPNISGFSIQGTTVSLNSFKGKKNVLVVFYRTQA*
Ga0134084_1001778033300010322Grasslands SoilMKSLIVALLLSMQVQGVAPNISGFSIQGTTINLNSFKGKKTVLVVFYRTQA*
Ga0126379_1124182433300010366Tropical Forest SoilMLAFQVQGVAPNITGFSVQGETVNLNSFKGKKPVLVVFYRTQA*
Ga0134124_1008452663300010397Terrestrial SoilMKALVLALLLAFQAQGIAPNITGFSIQGTSVNLNSFKGKKPVLVVFYRTQA*
Ga0126383_1322631713300010398Tropical Forest SoilTEGCVRIWLMKSLILALLLAFQAQGIAPNITGFSIQGESVNLNSFKGKKPVLVVFYRTQA
Ga0137422_100438853300011416SoilMKSLVFALLLALQAQTPAVAPNVGGFSVQGSTVNLSQFKGKKPVLVVFYRTQG*
Ga0137314_101564543300011420SoilMKSLVFALLLALQAQTGVQTGTVAPNVGGFAIQGSTVNLSQFKGKKPVLVVFYRTQG*
Ga0137421_101830813300012039SoilMKSLVFALLLALQAQTGVQTGTVAPNVGGFAIQGSTVNLSQFKGK
Ga0137364_1039201823300012198Vadose Zone SoilMKSLIVALLLAMQVQGVAPNISGFSIQGTTINLNSFKGQKTVLVVFYRTQA*
Ga0137383_1002002943300012199Vadose Zone SoilMKSLVFALLLALQGVQVQEVAPNITGFSIQGTTVNLNLFKGKKPVLVVFYRTQA*
Ga0137362_1120951533300012205Vadose Zone SoilMLFGLQGVQVQEVAPNITGFSIQGTTVNLNLFKGKKPVLVVFYRTQA*
Ga0137381_1000710173300012207Vadose Zone SoilMKSLLLTVLLALQVQGLAPQITGFAIQGVTVNLNSYRGKKPVLVVFYRTQA*
Ga0137381_1004886113300012207Vadose Zone SoilLIVALLLAMQVQGVAPNISGFSIQGTTINLNSFKGKKNVLLVFYRTQA*
Ga0137370_1060281933300012285Vadose Zone SoilAMQVQGVAPNISGFSIQGTTINLNSFKGQKTVLVVFYRTQA*
Ga0137387_1007819743300012349Vadose Zone SoilMKSLVFALLLALQGVQVQEMAPNITGFSIQGTTVNLNLFKGKKPVLVVFYRTQA*
Ga0137371_1029532533300012356Vadose Zone SoilMKSLLLTALLALQVQGVAPQITGFAIQGVTVNLNSYRGKKPVLVVFYRTQA*
Ga0137394_1111761333300012922Vadose Zone SoilMKAVVFSLLLMLQVQGVAPLFSGFSIQGTSINLSYYKGKQNVLVVFYRTQG*
Ga0126375_1104479233300012948Tropical Forest SoilMKSLALALLLGVQAQAVAPNITGFSVQGTTVNLSSFKGKKPVLVVFYRTQA*
Ga0134075_1050342523300014154Grasslands SoilMKSLIVGLLLAMQVQGVAPNISGFSIQGTTINLNSFKGKKTVLVVFYRT
Ga0180065_113485233300014878SoilLLALQAQTPAVAPNVGGFSVQGSTVNLSQFKGKKPVLVVFYRTQG*
Ga0134085_1053090213300015359Grasslands SoilVKSFLLTVLLALQVQGVAPQITGFAIQGVTVNLNSYKGKKSVLVVFYRTQ
Ga0132258_10015101153300015371Arabidopsis RhizosphereMRSFVLALLLMVQAQGLAPNSLAPNITGFSIQGTTVNLGSFKGKKPVLVVFYRTQA*
Ga0132258_1340660123300015371Arabidopsis RhizosphereMKSLVIGLLLAFQVQGIAPKITGFSIQGTSVSLEYYKGKKNVLVVFYRTQA*
Ga0132256_10218266313300015372Arabidopsis RhizosphereIPRMRSFVLALLLMVQAQGLAPNSLAPNITGFSIQGTTVNLGSFKGKKPVLVVFYRTQA*
Ga0134112_1025796633300017656Grasslands SoilSLIVALLLAMQVQGVAPNISGFSIQGTTVSLNSFKGKKNVLVVFYRTQA
Ga0134074_105245523300017657Grasslands SoilMKSLIVGLLLAMQVQGVAPNISGFSIQGTTINLNSFKGKKTVLVVFYRTQA
Ga0134083_1027982623300017659Grasslands SoilMKSLIVALLLAMQVQGVAPNISGFSIQGTTVSLNSFKGKKNVLVVFYRTQA
Ga0184639_1065059623300018082Groundwater SedimentMKPLLALLFLLFQVQGVAPNVTAFSIQGTTVNLDFYKGKQNVLLVFYRTQN
Ga0066655_1005569743300018431Grasslands SoilMKSLLLTVLLALQVQGVAPQITGFAIQGVTVNLNSYRGKKPVLVVFYRTQA
Ga0066655_1014343733300018431Grasslands SoilMKSLIVALLLAMQVQGVAPNISGFSIQGTTINLNSFKGKKTVLVVFYRTQA
Ga0066655_1022790523300018431Grasslands SoilMNSLIVALLLAMQVQGVAPNIMGFSIQGTTVNLNSFKGKKNVLVVFYRTQA
Ga0066667_1000993053300018433Grasslands SoilMKSLMVALLLAMQVQGVAPNISGFSIQGTTVNLNSFKGKKSVLVVFYRTQA
Ga0066669_1025186713300018482Grasslands SoilMNSLIVALLLAMQVQGVAPNIMGFSIQGTTVNLNSFKGKKSVLVVFYRTEA
Ga0184645_104238523300019233Groundwater SedimentGGIVKSFLLTVLLALQVQGVAPQITGFAIQGVTVNLNSYKGKKSVLVVFYRTQA
Ga0222625_101392213300022195Groundwater SedimentVKSFLLTVLLALQVQGVAPQITGFAIQGVTVNLNSYKGKKSVLVVFYRTQA
Ga0212128_1092693723300022563Thermal SpringsMKLLLAFVLLLQVKGIAPPITGFSIQGTTVSLNSYKGKQNVLVVFYRTQA
Ga0209619_1057087623300025159SoilMNALLVALLLAVQGISQGISGVAPNINGFSIQGSTVSLSSFKGTKNVLVVFYRTQA
Ga0209323_1050128923300025314SoilMNALVIALLLALQGMPLGISGAAPNINGFSIQGSTVSLSSFKGTKNVLVVFYRTQA
Ga0209641_1107035313300025322SoilMNALLALLLLLVQVQGVAPNVTAFSIQGTTVNLDFYKGKQNVLLVFYRTQN
Ga0209640_1075166123300025324SoilMKPLLAGLLLLFQIQGAAPNVTGFSIQGTTVNLNFYKGKQNVLLVFYRTHN
Ga0207646_1014571023300025922Corn, Switchgrass And Miscanthus RhizosphereMNSLIIALLLAMQVQGVAPNIMGFSIQGTTVNLNSFKGKKAVLVVFYRTQA
Ga0207646_1185844223300025922Corn, Switchgrass And Miscanthus RhizosphereMKSLILALLLAFQVEGAAPNISGFSVQGTTVNLSSFKGKKPVLVVFYRTQA
Ga0209350_104785313300026277Grasslands SoilMVALLLAMQVQGVAPNISGFSIQGTTVNLNSFKGKKSVLVVFYRTQA
Ga0209468_105844133300026306SoilMKSLIVALLLAMQVQGVAPNISGFSIQGTTINLNSFKGKKNVLVVFYRTQA
Ga0209470_1000465123300026324SoilMKSLIVGLLLAMQVQGVAPNISGFSIQGTTINLNSFKGKKNVLVVFYRTQA
Ga0209470_138107123300026324SoilVLTLLLALQIQGVAPQITGFAIQGVTVNLNSYKGKKNVLVVFYRTQA
Ga0209267_109721033300026331SoilMNSLIVALLLAMQVQGVAPNIMGFSIQGTTVNLNSFKGNKSVLVVFYRTQA
Ga0209058_110553633300026536SoilMKSLIFALLLAFQVQGVAPNISGFSVQGTTVNLNSFKGKKPVLVVFYRTQA
Ga0209156_1020169823300026547SoilMKSLIVALLLAMQVQGVAPNISGFSIQGTTVNLNSFKGKKSVLVVFYRTQA
Ga0209845_104462723300027324Groundwater SandMKTLVLALLLTLQAPIVAPNISGFSVQGTTVNLNSFKGKTPVLVVFYRTEA
Ga0209689_111687233300027748SoilMKSLMVALLLAMQVQGVAPNISGFSIQGMTINLNSFKGKKTVLVVFYRTQA
Ga0209382_1028606723300027909Populus RhizosphereMKSLVLALLLAFQVQAVAPNITGFSVQGETVNLNSFKGKKPVLVVFYRTQA
Ga0209382_1118654023300027909Populus RhizosphereMKTLVFALLLALQAPVVAPNISGFAVQGTTVNLNSFKGKKPVLVVFYRTEA
Ga0307468_10021720023300031740Hardwood Forest SoilMKALVIALLLAFQVQGVAPKITGFSIQGTSVSLEYYKGKKNVLVVFYRTQA
Ga0306923_1187023423300031910SoilMKALILALLLAFQAQGIAPNITGFSIQGESVNLNSFKGKKPVLVVFYRTQA
Ga0306926_1114537913300031954SoilGVTEGCVRIWLMKALILALLLAFQAQGIAPNITGFSIQGESVNLNSFKGKKPVLVVFYRTQA
Ga0310812_1005943013300032421SoilMKALVLALLLAFQAQGIAPNIIGFSIQGESVNLNSFKGKKPVLVVFYRTQA
Ga0326726_1055282623300033433Peat SoilMKSFVIALLLAFQVQGVAPKITGFSIQGTSVSLEYYKGKKNVLVVFYRTQA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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