Metagenome / Metatranscriptome Family F069949

Basic Information
Family ID	F069949
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	39 residues
Representative Sequence	VIRVLVPLVATNEQMDEGLDVLESALAAVCDKKGAVAQLV
Number of Associated Samples	108
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.44 %
% of genes near scaffold ends (potentially truncated)	95.93 %
% of genes from short scaffolds (< 2000 bps)	92.68 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Most Common Taxonomy
Group	Bacteria (82.114 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.008 % of family members)
Environment Ontology (ENVO)	Unclassified (25.203 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.033 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.88% β-sheet: 0.00% Coil/Unstructured: 69.12%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF00171	Aldedh	79.67
PF00202	Aminotran_3	7.32
PF01337	Barstar	1.63
PF04168	Alpha-E	0.81
PF01728	FtsJ	0.81
PF13349	DUF4097	0.81
PF13581	HATPase_c_2	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	79.67
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	79.67
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	79.67
COG2732	Barstar, RNAse (barnase) inhibitor	Transcription [K]	1.63
COG0293	23S rRNA U2552 (ribose-2'-O)-methylase RlmE/FtsJ	Translation, ribosomal structure and biogenesis [J]	0.81
COG1189	Predicted rRNA methylase YqxC, contains S4 and FtsJ domains	Translation, ribosomal structure and biogenesis [J]	0.81
COG2307	Uncharacterized conserved protein, Alpha-E superfamily	Function unknown [S]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.11 %
Unclassified	root	N/A	17.89 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.11 %
Unclassified	root	N/A	17.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.11 %
Unclassified	root	N/A	17.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	61.79 %
Unclassified	root	N/A	17.89 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.44 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	55.28 %
Unclassified	root	N/A	17.89 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.44 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.63 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	55.28 %
Unclassified	root	N/A	17.89 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.44 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.63 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	55.28 %
Unclassified	root	N/A	17.89 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.44 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.81 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.81 %
Chloroflexi bacterium ADurb.Bin360	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin360	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	55.28 %
Unclassified	root	N/A	17.89 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.81 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.81 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.81 %
Chloroflexi bacterium ADurb.Bin360	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin360	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	55.28 %
Unclassified	root	N/A	17.89 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.81 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.81 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.81 %
Chloroflexi bacterium ADurb.Bin360	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin360	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	55.28 %
Unclassified	root	N/A	17.89 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.81 %
unclassified Mycobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium	0.81 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.81 %
Chloroflexi bacterium ADurb.Bin360	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin360	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	55.28 %
Unclassified	root	N/A	17.89 %
Mycobacterium sp. ITM-2016-00317	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. ITM-2016-00317	0.81 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.81 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.81 %
Chloroflexi bacterium ADurb.Bin360	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin360	0.81 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004152\|Ga0062386_101682283	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300005176\|Ga0066679_10271792	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300005434\|Ga0070709_10943433	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300005440\|Ga0070705_100710878	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300005458\|Ga0070681_10713930	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300005471\|Ga0070698_100561172	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300005539\|Ga0068853_100216195	All Organisms → cellular organisms → Bacteria	1749	Open in IMG/M
3300005587\|Ga0066654_10413970	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300005587\|Ga0066654_10778910	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300005618\|Ga0068864_100416322	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300005834\|Ga0068851_10388643	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300005921\|Ga0070766_10538775	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300006791\|Ga0066653_10354787	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300006800\|Ga0066660_11462384	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300006806\|Ga0079220_10140845	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300009521\|Ga0116222_1307554	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300009523\|Ga0116221_1047294	Not Available	2024	Open in IMG/M
3300009545\|Ga0105237_11233319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300009617\|Ga0116123_1162735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300009624\|Ga0116105_1010782	Not Available	1860	Open in IMG/M
3300009628\|Ga0116125_1097033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300009698\|Ga0116216_10563662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300009759\|Ga0116101_1119462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300010048\|Ga0126373_10147820	All Organisms → cellular organisms → Bacteria	2230	Open in IMG/M
3300010339\|Ga0074046_10837130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300010359\|Ga0126376_11330169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300010361\|Ga0126378_10010834	All Organisms → cellular organisms → Bacteria	7453	Open in IMG/M
3300010376\|Ga0126381_103363122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300010379\|Ga0136449_102784138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300010400\|Ga0134122_10069012	Not Available	2743	Open in IMG/M
3300011269\|Ga0137392_11199629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300012096\|Ga0137389_11801646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300012201\|Ga0137365_10461000	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	935	Open in IMG/M
3300012201\|Ga0137365_11329370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300012927\|Ga0137416_10128803	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1949	Open in IMG/M
3300012975\|Ga0134110_10633091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300014489\|Ga0182018_10178313	Not Available	1200	Open in IMG/M
3300014495\|Ga0182015_10949389	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300014501\|Ga0182024_12935645	Not Available	504	Open in IMG/M
3300014839\|Ga0182027_12180185	Not Available	526	Open in IMG/M
3300015245\|Ga0137409_11311196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300015373\|Ga0132257_102019316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300015374\|Ga0132255_104044374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300017823\|Ga0187818_10421853	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300017924\|Ga0187820_1078122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	928	Open in IMG/M
3300017934\|Ga0187803_10441292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300017937\|Ga0187809_10096340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	988	Open in IMG/M
3300017955\|Ga0187817_10683301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300017955\|Ga0187817_10921240	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300017973\|Ga0187780_10167171	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1528	Open in IMG/M
3300017973\|Ga0187780_10895113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300017995\|Ga0187816_10554560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300018009\|Ga0187884_10254392	Not Available	715	Open in IMG/M
3300018022\|Ga0187864_10508181	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300018062\|Ga0187784_10973764	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300018086\|Ga0187769_10694265	Not Available	769	Open in IMG/M
3300018090\|Ga0187770_11171945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300018468\|Ga0066662_11120432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	788	Open in IMG/M
3300020582\|Ga0210395_10780694	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300020582\|Ga0210395_10894722	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300020582\|Ga0210395_11055919	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300020583\|Ga0210401_10103412	All Organisms → cellular organisms → Bacteria	2676	Open in IMG/M
3300021080\|Ga0210382_10138864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1036	Open in IMG/M
3300021181\|Ga0210388_11208733	Not Available	641	Open in IMG/M
3300021181\|Ga0210388_11509612	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300021406\|Ga0210386_11821621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300021407\|Ga0210383_10771202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300021433\|Ga0210391_10116406	All Organisms → cellular organisms → Bacteria → Acidobacteria	2104	Open in IMG/M
3300021474\|Ga0210390_10100140	All Organisms → cellular organisms → Bacteria → Acidobacteria	2418	Open in IMG/M
3300021477\|Ga0210398_11617447	Not Available	502	Open in IMG/M
3300021559\|Ga0210409_10262633	Not Available	1562	Open in IMG/M
3300021559\|Ga0210409_10820584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300021560\|Ga0126371_12076855	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300022717\|Ga0242661_1077350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300022726\|Ga0242654_10109229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300025448\|Ga0208037_1080754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300025477\|Ga0208192_1000515	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	31285	Open in IMG/M
3300025612\|Ga0208691_1151231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300025906\|Ga0207699_10276438	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300025914\|Ga0207671_11299274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300025915\|Ga0207693_11307542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. ITM-2016-00317	542	Open in IMG/M
3300025922\|Ga0207646_11155031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300025925\|Ga0207650_10269318	Not Available	1384	Open in IMG/M
3300025928\|Ga0207700_10834400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin360	825	Open in IMG/M
3300026088\|Ga0207641_12062353	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300026298\|Ga0209236_1106212	Not Available	1256	Open in IMG/M
3300026467\|Ga0257154_1027427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	848	Open in IMG/M
3300027562\|Ga0209735_1117999	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300027590\|Ga0209116_1024313	Not Available	1262	Open in IMG/M
3300027641\|Ga0208827_1061610	Not Available	1216	Open in IMG/M
3300027729\|Ga0209248_10168377	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300027803\|Ga0209910_10006553	All Organisms → cellular organisms → Bacteria → Acidobacteria	808	Open in IMG/M
3300027812\|Ga0209656_10227986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	891	Open in IMG/M
3300027824\|Ga0209040_10470079	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300027853\|Ga0209274_10544450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300027879\|Ga0209169_10506234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300027882\|Ga0209590_11054493	Not Available	505	Open in IMG/M
3300027908\|Ga0209006_10698331	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300027908\|Ga0209006_10982634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	673	Open in IMG/M
3300028759\|Ga0302224_10489672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300028906\|Ga0308309_10179705	Not Available	1728	Open in IMG/M
3300028906\|Ga0308309_11115374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300028906\|Ga0308309_11566604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300029943\|Ga0311340_11570528	Not Available	512	Open in IMG/M
3300030041\|Ga0302274_10457803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300030737\|Ga0302310_10752031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300031525\|Ga0302326_11328629	Not Available	977	Open in IMG/M
3300031525\|Ga0302326_13719195	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300031708\|Ga0310686_106627182	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300031720\|Ga0307469_12267789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300031753\|Ga0307477_10140291	Not Available	1686	Open in IMG/M
3300031753\|Ga0307477_10517752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300031754\|Ga0307475_11087197	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300031788\|Ga0302319_11563263	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300031823\|Ga0307478_10732159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828	Open in IMG/M
3300031823\|Ga0307478_11699168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300032076\|Ga0306924_10958907	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	942	Open in IMG/M
3300032180\|Ga0307471_103530930	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300032892\|Ga0335081_10546206	Not Available	1444	Open in IMG/M
3300032892\|Ga0335081_11699284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300032954\|Ga0335083_10068759	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3628	Open in IMG/M
3300033004\|Ga0335084_10518019	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1224	Open in IMG/M
3300033158\|Ga0335077_10319185	Not Available	1694	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.68%
Host-Associated	Host-Associated	7.32%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.61%
Aquatic	Environmental → Aquatic	17.07%
Plants	Host-Associated → Plants	7.32%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.92%
Freshwater	Environmental → Aquatic → Freshwater	17.07%
Peat	Environmental → Terrestrial → Peat	5.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.44%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.28%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.26%
Loam	Environmental → Terrestrial → Soil → Loam	14.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.01%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.69%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.63%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.51%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.50%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.69%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.88%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.63%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.01%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.69%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.69%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.06%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.06%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.06%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.06%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.06%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.25%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.63%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.63%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.63%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.81%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.81%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.81%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.81%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009617	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025448	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100 (SPAdes)	Environmental	Open in IMG/M
3300025477	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027803	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 712S3S	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069949

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062386_1016822832	3300004152	Bog Forest Soil	VLVPLVVSDEQMDEALRVLESALQTVFEKRSAVGVTVIT*
Ga0066679_102717922	3300005176	Soil	VIRVLVPLVATNDQIDEGLDVLESAVAAVCDKKGAVAQLV*
Ga0070709_109434331	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	IRLLVPLVVTAEQMDEGLDVLQSALQTVYEKKGAIAQPV*
Ga0070705_1007108781	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VRVLVPLVVTDQQLDEGLEVLESALQMVYEGSKKGAVPQPV*
Ga0070681_107139301	3300005458	Corn Rhizosphere	VRVLVPLVVTDQQLDEGLDVLESALQMVCERKGAVAQRV*
Ga0070698_1005611722	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VRVLVPLVITDDQMDEGLDVLESALQAVYEKKAAIAQPV*
Ga0068853_1002161951	3300005539	Corn Rhizosphere	VVRVLVPLVVTDQQLDEGLDVLESALQMVCERKGAVAQRV*
Ga0066654_104139702	3300005587	Soil	IRVLVPLVGTDAQMDEGLDVLEAALKAACEKKAVVAQTV*
Ga0066654_107789101	3300005587	Soil	NVIRVLVPLVITNEQLDEALDVLESAIASVCDPKPAVAQLV*
Ga0068864_1004163221	3300005618	Switchgrass Rhizosphere	VRVLVPLVVTDQQLDEGLDVLESALQMVCEKKGAVAQRM*
Ga0068851_103886431	3300005834	Corn Rhizosphere	YGNVIRLLVPLVITREQMDEALDVLQAGLQMVCEKMGAVAQTMGS*
Ga0070766_105387751	3300005921	Soil	RVLVPLVATDAQMDEGLGVLESAIATVCDRKGAVAQLV*
Ga0066653_103547872	3300006791	Soil	SNVIRVLVPLVGTDAQMDEGLDVLEAALKAACEKKAVVAQTV*
Ga0066660_114623841	3300006800	Soil	NVIRVLVPLVATNDQIDEGLDVLESAVAAVCDKKGAVAQLV*
Ga0079220_101408451	3300006806	Agricultural Soil	MLVPLVITNEQMDEALDVLQSAIANVCDTKGAVAQLV*
Ga0116222_13075541	3300009521	Peatlands Soil	IRVLVPLVATNEQMDEGLDVLESALAAVSDKKGAVAQLV*
Ga0116221_10472943	3300009523	Peatlands Soil	LVPLVISNEQMDEALDVLESAIATVCNQKGAVAQLV*
Ga0105237_112333192	3300009545	Corn Rhizosphere	RVLVPLVITNEQMDEGMDVLQSALQMVSEKKGAIAQPV*
Ga0116123_11627352	3300009617	Peatland	VRVLVPLVVTSEQMDEALDVLEAALQSVSEKRGAATRTA*
Ga0116105_10107822	3300009624	Peatland	VPLVATNEQMDEGLDVLESALAAVCDKKGAVAQLV*
Ga0116125_10970331	3300009628	Peatland	NVIRILVPLVATNEQMDEGLDVLESALASVCDKKGAVAQLV*
Ga0116216_105636622	3300009698	Peatlands Soil	NVIRVLVPLVATDEQMDEGLDVLESALAAVCDKKGAVAQLV*
Ga0116101_11194621	3300009759	Peatland	VLVPLVITNEQMDEALGVLESAIASVCDRKGAVAQLV*
Ga0126373_101478203	3300010048	Tropical Forest Soil	RVLVPLVISEEQMDEALGVLEAAIASVCDKKGAVPQLV*
Ga0074046_108371301	3300010339	Bog Forest Soil	NVIRILVPLVATNEQMDEGLDVLESALAAVCDKKGAVAQLV*
Ga0126376_113301692	3300010359	Tropical Forest Soil	VPLIISQEQMDEALDVLESAIANVCEQKGAVAQLV*
Ga0126378_1001083410	3300010361	Tropical Forest Soil	VIRVLVPFVITNEQIDEALDVLESAIANICELKSAVAQLV*
Ga0126381_1033631221	3300010376	Tropical Forest Soil	NVIRVLVPLVVTKEQMDEALDVLESGIASVCDKKGAVAQLV*
Ga0136449_1027841381	3300010379	Peatlands Soil	IRVLVPLVITNEQMDEALAVLESAIAAVCDQKGAVAQLV*
Ga0134122_100690121	3300010400	Terrestrial Soil	VVRVLVPLVVTDQQLDEGLDVLESALQMVCEKKGAVAQRM*
Ga0137392_111996291	3300011269	Vadose Zone Soil	VLVPLVATNEQIDEGLDVLESALAAVCDKKGAVAQLV*
Ga0137389_118016462	3300012096	Vadose Zone Soil	VLVPLVATNDQIDEGLDVLESALAIVCDKKDAVLTLSS*
Ga0137365_104610001	3300012201	Vadose Zone Soil	NVIRVLVPLVIANEQMDEALDVLESAIAAVCDKKGAVAQLV*
Ga0137365_113293701	3300012201	Vadose Zone Soil	IRVLVPLVATDAQMDEGLAVLESALAAVCNKKGAVAQLV*
Ga0137416_101288034	3300012927	Vadose Zone Soil	SNVIRVLVPLVVTSEQLDEGLDVLESAIAAVCDTKDAAVELV*
Ga0134110_106330912	3300012975	Grasslands Soil	PLVVTDAQMREALDVLESALAAVAEKKSAVAQLA*
Ga0182018_101783131	3300014489	Palsa	LLVPMVVSNEQMDEGLNVMESALQIVSEKKGLVEQPA*
Ga0182015_109493891	3300014495	Palsa	VPLVATTEQMDEGLDVLESALAAVCDKKGAVAQLV*
Ga0182024_129356451	3300014501	Permafrost	ILVPLVITQAQWDEGLEVLESALQAVHEKKEAVTQPA*
Ga0182027_121801852	3300014839	Fen	LVPLVVTQAQWDEGLDVLESALQAVHEKKEGLTQSV*
Ga0137409_113111962	3300015245	Vadose Zone Soil	RVLVPLVISREQMDEALEVLESALQSVDEKRGAVAQQV*
Ga0132257_1020193162	3300015373	Arabidopsis Rhizosphere	VIRALVPLVITKEQMDEALDVLESAIAAVCNKKGAVAQLV*
Ga0132255_1040443742	3300015374	Arabidopsis Rhizosphere	PLVASDAQMDEGLDVLEAALQAVSEKKAVVAQPG*
Ga0187818_104218531	3300017823	Freshwater Sediment	LTVVLVPLVIAKEQMDEALDVLESAIANVCDQKGAVAQLV
Ga0187820_10781222	3300017924	Freshwater Sediment	NVIRVLVPLVITKEQMKEALDVLESAIAAVCGTKSAVAQLA
Ga0187803_104412921	3300017934	Freshwater Sediment	YSNVIRVLVPLVATNDQMDEGLDVLESALAAVCDKKGAVAQLV
Ga0187809_100963401	3300017937	Freshwater Sediment	GSYSNVIRVLVPLVIANEQMDEALDVLESAIATVSDQKGAVAQLV
Ga0187817_106833011	3300017955	Freshwater Sediment	NVIRVLVPLVITKEQMDEALDVLESAIATVCDQKGAVAQMV
Ga0187817_109212401	3300017955	Freshwater Sediment	NVIRVLVPLVVTDEQMDEALDVLESALKTVYEKTGAVAQPA
Ga0187780_101671713	3300017973	Tropical Peatland	NVIRVLVPLVVTDEQMNEALDVLESALKAVCEKTGVVAQPV
Ga0187780_108951131	3300017973	Tropical Peatland	TYSNVIRVLVPLVITNEQMDEAMDTLESAIANVCDPKGAVAQLV
Ga0187816_105545601	3300017995	Freshwater Sediment	TYANVIRVLVPLVITKEQMDEALCVLESAIAAVCDRKGAVAQLA
Ga0187884_102543922	3300018009	Peatland	SNVIRVLVPLVATDEQMDEGLDVLESALASVCDKKGAVAQLV
Ga0187864_105081811	3300018022	Peatland	VLVPLVITNEQMDEGLDVLESAIATVWSQKGAVAQLV
Ga0187784_109737641	3300018062	Tropical Peatland	NVIRVLVPLVITNEQMDEAMDTLESAIANVCDPKGAVAQLV
Ga0187769_106942651	3300018086	Tropical Peatland	IRLLMPLVITDSQMDDALNVLESALAAVSDKKGAVAQLV
Ga0187770_111719452	3300018090	Tropical Peatland	VPLVITNEQMDEALDVLESALAAVCGQKSAAAQLV
Ga0066662_111204322	3300018468	Grasslands Soil	CNVIRVLVPLVVTEDQMDEALNVLESALQTVYEKKIAIAQPM
Ga0210395_107806941	3300020582	Soil	SNVIRLLVPLVVTDEQMDEALDVLESALQTVCEKKDVATMIT
Ga0210395_108947221	3300020582	Soil	VIRVLVPLVMTNEQMDEALAVLESAIAAVCDQKGAVAQLV
Ga0210395_110559191	3300020582	Soil	VLVPLVATNEQMDEGLDVLESALAAVCDKKGAVAQLV
Ga0210401_101034121	3300020583	Soil	VIRVLVPLVATNDQMDEGLDVLESALTAVCDKKGAVAQLV
Ga0210382_101388642	3300021080	Groundwater Sediment	VVRVLVPLVITNEQMDEGMDVLQSALQMVYERKGAIAQPV
Ga0210388_112087331	3300021181	Soil	RLLVPLVVTDEQMDEALDVLGSALRTVSPKRDVVAQTV
Ga0210388_115096121	3300021181	Soil	LVPLVATNEQMDEGLDVLESALAAVCDKRGAMAQLV
Ga0210386_118216212	3300021406	Soil	LVPLVITNEQMDEGLDVLESALQVVYEKRGAVAQPV
Ga0210383_107712022	3300021407	Soil	NVIRLLVPLVVTDEQMDEALDVLESALQTVCEKKDVATMIT
Ga0210391_101164061	3300021433	Soil	IRILVPLVATNEQMEEGLDVLESALASVCDKKGAVAQLV
Ga0210390_101001401	3300021474	Soil	VPLVATNEQMDEGLDVLESALASVCDKKGAVAQLV
Ga0210398_116174472	3300021477	Soil	VLVPLVATNEQLDEGLDVLETALAAVCDKKGAVAQLV
Ga0210409_102626332	3300021559	Soil	IRVLVPLVATNDQMDEGMGVLESAIATVFDQKGAVAQLV
Ga0210409_108205841	3300021559	Soil	VLVPLVVTDEQMDEALDVLESALQTASEKRGVVATMIT
Ga0126371_120768553	3300021560	Tropical Forest Soil	VLVPLVITKEQMDEALDVLEAAIACVCHQKGAVAQLV
Ga0242661_10773502	3300022717	Soil	VPLVITKEQMKEALDVLESAIAAVCGTKSVMAQLV
Ga0242654_101092291	3300022726	Soil	ILVPLVATNEQIDEGLAVLESALAAVCDKKGAVAQLV
Ga0208037_10807541	3300025448	Peatland	VRVLVPLVVTSEQMDEALDVLEAALQSVSEKRGAATRTA
Ga0208192_10005151	3300025477	Peatland	LVPLVATNEQMDEGLDVLESALAAVCVKKGAIAQLV
Ga0208691_11512311	3300025612	Peatland	ILVPLVATNEQIDEGLDVLEAALANVCDKKGVVAQLV
Ga0207699_102764382	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	TYSNVIRVLVPLVITNEQMDEAMDVLESAIANVCEQKGAVALV
Ga0207671_112992741	3300025914	Corn Rhizosphere	RVLVPLVITNEQMDEGMDVLQSALQMVSEKKGAIAQPV
Ga0207693_113075421	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VIRILVPLIISSEQMDEGLDVLESALLEVNEKKGVLATQPVESSA
Ga0207646_111550312	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	YSNVIRVLVPLVATDGQMDEGLHVLEAALKAACEKKAVVAQIV
Ga0207650_102693182	3300025925	Switchgrass Rhizosphere	RVLVPLVVTDQQLDEGLDVLESALQMVCEKKGAVAQRM
Ga0207700_108344002	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VIRVLVPLVITNEQMDEALDVLESAIANVCDAKGAVAQLV
Ga0207641_120623531	3300026088	Switchgrass Rhizosphere	YGNVIRLLVPLVITREQMDEALDVLQAGLQMVCEKMGAVAQTMGS
Ga0209236_11062122	3300026298	Grasslands Soil	VPLVITNEQMNEALDVLESALKAACETRLRVAQPI
Ga0257154_10274271	3300026467	Soil	VPLVATDAQIDEGLKVLESALAAVCGQKSEVPQLV
Ga0209735_11179991	3300027562	Forest Soil	GTPSNVIRVLVPLVASDAQIDEGLSVLEAALAAVCNQKGAVAQLV
Ga0209116_10243131	3300027590	Forest Soil	VIRVLVPLVATDEQMDEGLDVLESALAAVCDKKGAVAQLV
Ga0208827_10616101	3300027641	Peatlands Soil	VPLVISNEQMDEALDVLESAIATVCNQKGAVAQLV
Ga0209248_101683771	3300027729	Bog Forest Soil	SYSNVIRVLVPLVATNEQMDEGLDVLESALAAVCGKKDAALSLSS
Ga0209910_100065531	3300027803	Thawing Permafrost	VIRILVPLVATNEQIDEGLDVLESALAAVCDKKGAVAQLV
Ga0209656_102279862	3300027812	Bog Forest Soil	YSDVIRVLVPLVATNEQMDEGMDVLESALAAVCDKQGAVAQLA
Ga0209040_104700791	3300027824	Bog Forest Soil	LVPLVATNEQMDEGLDVLESALAAVCDKKGAVAQLV
Ga0209274_105444502	3300027853	Soil	VPLVVTDEQMNEALDVLESALQTLSEKRGIVNATMIM
Ga0209169_105062341	3300027879	Soil	RVLVPLVITNEQMDEALDVLESAIATVCDQKGVVAQLV
Ga0209590_110544932	3300027882	Vadose Zone Soil	VLVPLVVTAEQMDEGLNVLESALQAVYEKKEAIAQPV
Ga0209006_106983311	3300027908	Forest Soil	LVPLVITNEQMDEGLDVLESALQVVYEKRVAVAQTV
Ga0209006_109826341	3300027908	Forest Soil	VIRVLVPLVATNEQIDEGLDVLESALAAVCDKKGAVAQLV
Ga0302224_104896721	3300028759	Palsa	LVPLVATNEQIDEGLDVLEAALANVCDKKGVVAQLV
Ga0308309_101797052	3300028906	Soil	VPLVVTDQQLDEGLDVLESALQMVYERKGAVAQPV
Ga0308309_111153742	3300028906	Soil	RVLVPLVISNEQMDEAMDVLESAIANVCEQKGAVAQLV
Ga0308309_115666041	3300028906	Soil	LVPLVATNEQMDEGLGVLESALASVCDKKGAVAQLV
Ga0311340_115705281	3300029943	Palsa	VLVPLVATNEQMDEGLDVLEAALASVPDKKGVIAQLV
Ga0302274_104578031	3300030041	Bog	LVPLVATNEQMDEGMDVLESALAAVCDKKGAVAQLV
Ga0302310_107520312	3300030737	Palsa	IRILVPLVATNEQIDEGLGVLESALAAVCDKKGAVAQLV
Ga0302326_113286292	3300031525	Palsa	IRLLVPLVITPEQTDEGMDVLESALQMVSEKKGAVPQSVPS
Ga0302326_137191952	3300031525	Palsa	RVLVPLVATNEQMDEGLDVLESALAAVCDKRGAIAQLV
Ga0310686_1066271821	3300031708	Soil	NVIRVLVPLVITDEQMDEALGVLESAIAAVCGQKTAVPQLV
Ga0307469_122677891	3300031720	Hardwood Forest Soil	VIRVLVPLVITKEQMDEALDVLESAIAAVCNKKGALAQLV
Ga0307477_101402911	3300031753	Hardwood Forest Soil	IRVLVPLVITNEQMDEALGVLESAIASVCEQKGAVAQLV
Ga0307477_105177522	3300031753	Hardwood Forest Soil	VIRVLVPLVVTDQQMDEALNVLESALQTVSEKKDVATVLT
Ga0307475_110871972	3300031754	Hardwood Forest Soil	NVIRVLVPLVITKEQTDEALDVLESGIAEICGKKGAVAQLV
Ga0302319_115632631	3300031788	Bog	SYSNVIRVLVPLVATNEQIDEGLDVLESALAAVCDKKGAALSLSS
Ga0307478_107321591	3300031823	Hardwood Forest Soil	VPLVISNEQMDEAMDVLESAIANVCEQKGAVAQLV
Ga0307478_116991682	3300031823	Hardwood Forest Soil	VIRVLVPLVATNEQMDEGLDVLESALAAVCDKKGAVAQLV
Ga0306924_109589071	3300032076	Soil	VPLVITDQQMDEALGVLESAIAAVCNKKGAVAQMV
Ga0307471_1035309302	3300032180	Hardwood Forest Soil	VLVPLVITDPQMDEGLDVLESALQTVYERKGAVAQPV
Ga0335081_105462061	3300032892	Soil	VPLVITEAQMDEALDVLESAITAVCDKKGAVAQLV
Ga0335081_116992841	3300032892	Soil	IRVLVPLVVTDLQMDEGLDVLEAGLQTVCEKSRPVAQPV
Ga0335083_100687594	3300032954	Soil	VVRVLVPLVVSDEQLDEGLDVLESALQMVYEKRGAIAEPV
Ga0335084_105180192	3300033004	Soil	SNVIRVLVPLVITNEQMNEAMNVLESAIANVGEPKDAVAQLVQ
Ga0335077_103191851	3300033158	Soil	TFSNVIRVLVPLVITNDQMDEALGVLESAIAGVCDKKGAVAQVV

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign