Metagenome Family F069946

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F069946
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	67 residues
Representative Sequence	GTQPGDTGRRLWHAGSNGRWNCGVFIAPEIDFAVLVACNRGIAAWKTRQTLKALIRTFAPKRTS
Number of Associated Samples	108
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.81 %
% of genes near scaffold ends (potentially truncated)	98.37 %
% of genes from short scaffolds (< 2000 bps)	91.06 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (88.618 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (13.008 % of family members)
Environment Ontology (ENVO)	Unclassified (34.959 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.650 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.70% β-sheet: 0.00% Coil/Unstructured: 66.30%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF00106	adh_short	4.88
PF09752	ABHD18	4.07
PF04072	LCM	3.25
PF00144	Beta-lactamase	3.25
PF13561	adh_short_C2	2.44
PF06439	3keto-disac_hyd	2.44
PF03551	PadR	1.63
PF03466	LysR_substrate	1.63
PF00248	Aldo_ket_red	0.81
PF07586	HXXSHH	0.81
PF00664	ABC_membrane	0.81
PF08534	Redoxin	0.81
PF08757	CotH	0.81
PF07638	Sigma70_ECF	0.81
PF11867	DUF3387	0.81
PF02899	Phage_int_SAM_1	0.81
PF12710	HAD	0.81
PF00326	Peptidase_S9	0.81
PF00126	HTH_1	0.81
PF00702	Hydrolase	0.81
PF13385	Laminin_G_3	0.81
PF11231	DUF3034	0.81
PF10988	DUF2807	0.81
PF04480	DUF559	0.81
PF02566	OsmC	0.81
PF09346	SMI1_KNR4	0.81
PF13570	PQQ_3	0.81
PF00535	Glycos_transf_2	0.81
PF03781	FGE-sulfatase	0.81
PF13646	HEAT_2	0.81
PF00440	TetR_N	0.81
PF04002	RadC	0.81
PF12695	Abhydrolase_5	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	3.25
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	3.25
COG2367	Beta-lactamase class A	Defense mechanisms [V]	3.25
COG3315	O-Methyltransferase involved in polyketide biosynthesis	Secondary metabolites biosynthesis, transport and catabolism [Q]	3.25
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.63
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.63
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.63
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.81
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.81
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.81
COG2003	DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif	Replication, recombination and repair [L]	0.81
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.81
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.81
COG5337	Spore coat protein CotH	Cell wall/membrane/envelope biogenesis [M]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.43 %
Unclassified	root	N/A	10.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.43 %
Unclassified	root	N/A	10.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.62 %
Unclassified	root	N/A	10.57 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.81 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	73.17 %
Unclassified	root	N/A	10.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.07 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.81 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	69.92 %
Unclassified	root	N/A	10.57 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.63 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	51.22 %
Unclassified	root	N/A	10.57 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	8.94 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.63 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.81 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	51.22 %
Unclassified	root	N/A	10.57 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	8.94 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	1.63 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.81 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	51.22 %
Unclassified	root	N/A	10.57 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	7.32 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.63 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.81 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.81 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	51.22 %
Unclassified	root	N/A	10.57 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	4.88 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	2.44 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	1.63 %
Haloferula	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Haloferula	0.81 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.81 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	51.22 %
Unclassified	root	N/A	10.57 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	4.88 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	2.44 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1.63 %
unclassified Haloferula	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Haloferula → unclassified Haloferula	0.81 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.81 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	51.22 %
Unclassified	root	N/A	10.57 %
Pedosphaera parvula Ellin514	strain	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	4.07 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	2.44 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1.63 %
Haloferula sp. BvORR071	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Haloferula → unclassified Haloferula → Haloferula sp. BvORR071	0.81 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.81 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c1032256	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	557	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1055673	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	579	Open in IMG/M
3300004082\|Ga0062384_101258610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	540	Open in IMG/M
3300004156\|Ga0062589_102810750	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300004479\|Ga0062595_100269121	All Organisms → cellular organisms → Bacteria → Proteobacteria	1122	Open in IMG/M
3300005294\|Ga0065705_10776662	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300005332\|Ga0066388_102946319	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	870	Open in IMG/M
3300005338\|Ga0068868_100627339	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300005345\|Ga0070692_10171267	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1252	Open in IMG/M
3300005440\|Ga0070705_101006817	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300005577\|Ga0068857_101282280	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300006791\|Ga0066653_10513657	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	606	Open in IMG/M
3300006796\|Ga0066665_10242320	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1422	Open in IMG/M
3300006796\|Ga0066665_11317131	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	555	Open in IMG/M
3300006845\|Ga0075421_102015824	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	614	Open in IMG/M
3300006846\|Ga0075430_101461988	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300006852\|Ga0075433_11247959	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	644	Open in IMG/M
3300006853\|Ga0075420_101055888	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	699	Open in IMG/M
3300006853\|Ga0075420_101669888	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	545	Open in IMG/M
3300006854\|Ga0075425_102827631	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	534	Open in IMG/M
3300006894\|Ga0079215_11733495	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	500	Open in IMG/M
3300006918\|Ga0079216_10999928	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	645	Open in IMG/M
3300007004\|Ga0079218_11796473	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	686	Open in IMG/M
3300007258\|Ga0099793_10416517	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	662	Open in IMG/M
3300009094\|Ga0111539_13074495	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	539	Open in IMG/M
3300009137\|Ga0066709_103076956	Not Available	610	Open in IMG/M
3300009137\|Ga0066709_104162643	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300009147\|Ga0114129_12227949	Not Available	659	Open in IMG/M
3300009147\|Ga0114129_13383196	Not Available	513	Open in IMG/M
3300009148\|Ga0105243_13137596	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	500	Open in IMG/M
3300009156\|Ga0111538_11597878	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300009156\|Ga0111538_13049616	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	585	Open in IMG/M
3300009519\|Ga0116108_1185727	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	612	Open in IMG/M
3300009549\|Ga0116137_1188571	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	555	Open in IMG/M
3300009553\|Ga0105249_11325550	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	791	Open in IMG/M
3300009609\|Ga0105347_1040158	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1656	Open in IMG/M
3300009609\|Ga0105347_1242322	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300009641\|Ga0116120_1016105	All Organisms → cellular organisms → Bacteria → Acidobacteria	2812	Open in IMG/M
3300009678\|Ga0105252_10340998	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	677	Open in IMG/M
3300009700\|Ga0116217_10849787	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	561	Open in IMG/M
3300010329\|Ga0134111_10244414	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	735	Open in IMG/M
3300010359\|Ga0126376_11501822	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	702	Open in IMG/M
3300010364\|Ga0134066_10016323	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1586	Open in IMG/M
3300010366\|Ga0126379_13231981	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	546	Open in IMG/M
3300010397\|Ga0134124_10391227	All Organisms → cellular organisms → Bacteria → PVC group	1320	Open in IMG/M
3300010399\|Ga0134127_10002628	All Organisms → cellular organisms → Bacteria	12916	Open in IMG/M
3300010403\|Ga0134123_12191227	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	614	Open in IMG/M
3300011415\|Ga0137325_1077204	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	736	Open in IMG/M
3300011423\|Ga0137436_1023506	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1533	Open in IMG/M
3300011430\|Ga0137423_1001176	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Haloferula → unclassified Haloferula → Haloferula sp. BvORR071	8094	Open in IMG/M
3300011440\|Ga0137433_1245277	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	585	Open in IMG/M
3300011444\|Ga0137463_1348859	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300012201\|Ga0137365_10236837	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1360	Open in IMG/M
3300012206\|Ga0137380_10581527	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	981	Open in IMG/M
3300012210\|Ga0137378_10305616	Not Available	1480	Open in IMG/M
3300012210\|Ga0137378_10782696	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	866	Open in IMG/M
3300012211\|Ga0137377_10250320	Not Available	1702	Open in IMG/M
3300012212\|Ga0150985_111004970	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	673	Open in IMG/M
3300012582\|Ga0137358_10162051	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1524	Open in IMG/M
3300012683\|Ga0137398_11149175	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	533	Open in IMG/M
3300012685\|Ga0137397_10397846	Not Available	1026	Open in IMG/M
3300012685\|Ga0137397_11065603	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	591	Open in IMG/M
3300012896\|Ga0157303_10050262	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	853	Open in IMG/M
3300012922\|Ga0137394_10321488	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1322	Open in IMG/M
3300012923\|Ga0137359_10138795	Not Available	2164	Open in IMG/M
3300012923\|Ga0137359_10500350	All Organisms → cellular organisms → Bacteria → PVC group	1072	Open in IMG/M
3300012923\|Ga0137359_10604668	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300012944\|Ga0137410_10240246	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1416	Open in IMG/M
3300012944\|Ga0137410_10432647	Not Available	1065	Open in IMG/M
3300012988\|Ga0164306_11743867	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	541	Open in IMG/M
3300013308\|Ga0157375_12315521	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	640	Open in IMG/M
3300014154\|Ga0134075_10101465	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1215	Open in IMG/M
3300014159\|Ga0181530_10033949	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3574	Open in IMG/M
3300014325\|Ga0163163_10778371	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1020	Open in IMG/M
3300014502\|Ga0182021_10118214	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3079	Open in IMG/M
3300014839\|Ga0182027_11472164	Not Available	671	Open in IMG/M
3300014865\|Ga0180078_1049991	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	698	Open in IMG/M
3300014870\|Ga0180080_1102580	Not Available	509	Open in IMG/M
3300014968\|Ga0157379_10557509	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1067	Open in IMG/M
3300014969\|Ga0157376_11922330	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	629	Open in IMG/M
3300015252\|Ga0180075_1033929	All Organisms → cellular organisms → Eukaryota → Opisthokonta	792	Open in IMG/M
3300015371\|Ga0132258_10903562	All Organisms → cellular organisms → Bacteria	2229	Open in IMG/M
3300015371\|Ga0132258_11185182	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1931	Open in IMG/M
3300015371\|Ga0132258_11298907	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1839	Open in IMG/M
3300015372\|Ga0132256_100688079	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1138	Open in IMG/M
3300015373\|Ga0132257_102219754	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	710	Open in IMG/M
3300015374\|Ga0132255_103365286	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	681	Open in IMG/M
3300017659\|Ga0134083_10220373	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	787	Open in IMG/M
3300017931\|Ga0187877_1316663	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	595	Open in IMG/M
3300018013\|Ga0187873_1000107	All Organisms → cellular organisms → Bacteria	95103	Open in IMG/M
3300018016\|Ga0187880_1134644	All Organisms → cellular organisms → Bacteria → Proteobacteria	1177	Open in IMG/M
3300018016\|Ga0187880_1374450	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	600	Open in IMG/M
3300018018\|Ga0187886_1281439	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	623	Open in IMG/M
3300018024\|Ga0187881_10317247	Not Available	645	Open in IMG/M
3300018025\|Ga0187885_10056991	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1990	Open in IMG/M
3300018071\|Ga0184618_10392898	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300018081\|Ga0184625_10008724	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	4630	Open in IMG/M
3300018422\|Ga0190265_13843349	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300018469\|Ga0190270_10855812	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300019875\|Ga0193701_1109642	Not Available	506	Open in IMG/M
3300020202\|Ga0196964_10440085	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300021088\|Ga0210404_10065341	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1754	Open in IMG/M
3300021344\|Ga0193719_10233762	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300021559\|Ga0210409_10039979	All Organisms → cellular organisms → Bacteria	4454	Open in IMG/M
3300024254\|Ga0247661_1053967	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	738	Open in IMG/M
3300025460\|Ga0208562_1052424	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	882	Open in IMG/M
3300025936\|Ga0207670_10094966	All Organisms → cellular organisms → Bacteria → Proteobacteria	2117	Open in IMG/M
3300026088\|Ga0207641_11377581	Not Available	706	Open in IMG/M
3300026116\|Ga0207674_10240692	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1756	Open in IMG/M
3300027854\|Ga0209517_10408633	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	761	Open in IMG/M
3300028819\|Ga0307296_10584212	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	612	Open in IMG/M
3300030053\|Ga0302177_10550708	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	593	Open in IMG/M
3300030659\|Ga0316363_10383304	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	549	Open in IMG/M
3300031231\|Ga0170824_114393221	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	810	Open in IMG/M
3300031720\|Ga0307469_11383534	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	671	Open in IMG/M
3300031941\|Ga0310912_10685159	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	795	Open in IMG/M
3300032076\|Ga0306924_10645529	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1194	Open in IMG/M
3300032076\|Ga0306924_11928492	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	611	Open in IMG/M
3300032144\|Ga0315910_10705111	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	784	Open in IMG/M
3300032397\|Ga0315287_11916606	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	656	Open in IMG/M
3300033004\|Ga0335084_11196021	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	760	Open in IMG/M
3300033482\|Ga0316627_102370092	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	558	Open in IMG/M
3300033521\|Ga0316616_103992049	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	555	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.24%
Host-Associated	Host-Associated	22.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.28%
Plants	Host-Associated → Plants	22.76%
Aquatic	Environmental → Aquatic	21.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.82%
Freshwater	Environmental → Aquatic → Freshwater	11.38%
Sediment	Environmental → Aquatic → Sediment	10.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.13%
Peat	Environmental → Terrestrial → Peat	0.81%
Roots	Host-Associated → Plants → Roots	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.01%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.06%
Loam	Environmental → Terrestrial → Soil → Loam	3.25%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.25%
Lake	Environmental → Aquatic → Freshwater → Lake	0.81%
Sand	Environmental → Terrestrial → Soil → Sand	0.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.57%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.32%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.32%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.06%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.25%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.44%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.63%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.81%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.01%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	8.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.50%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.06%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.25%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.25%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.44%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.44%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.44%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.63%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.63%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.81%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.81%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.81%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.81%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009549	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011415	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014865	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT499_16_10D	Environmental	Open in IMG/M
3300014870	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT560_16_10D	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015252	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT399_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300025460	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150 (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_10322561	2228664022	Soil	RRLWHAGRNGRSGSGVVIAPEIDFAVLVACNRDVAAWKMRQAVKALIRTFAPKQTS
AP72_2010_repI_A01DRAFT_10556732	3300000579	Forest Soil	DTGHRLWHAGRIGRWGCGVVIAPEIDFAVLVAFNRDTVAWKARQTVKTLIRIFAPKQTS*
Ga0062384_1012586102	3300004082	Bog Forest Soil	GWFISTASWAKGTQPGDTGRRLWHAGSNGRWNCGVVIAPEIDFAVLVACNRCMAAWKTRQTVKALIRTFAPKRTS*
Ga0062589_1028107502	3300004156	Soil	WFISTASWAKGTQPGDTGRRLWHAGREGMSHSIVVIAPEIDFAVLVMCNRDADIAFWKTRQTVKALIRTFAPKRTS*
Ga0062595_1002691213	3300004479	Soil	PGDTGRRLWHAGRNGRSGSGVVIAPEIDFAVLVACNRDVAAWKMRRAVKTLIRTFAPKQTQ*
Ga0065705_107766621	3300005294	Switchgrass Rhizosphere	RLWHAGSNGRWNCGVVIAPEIDFAVLVACNRAIAAWKTRQTVKALIRKFAPKRTS*
Ga0066388_1029463192	3300005332	Tropical Forest Soil	GTQPGDTGRRLWHAGSNGKWGSGVVIAPEIDFAVLVACNRAIAAWKTRQAVRALIREFGPKRTS*
Ga0068868_1006273391	3300005338	Miscanthus Rhizosphere	QPGDTGRRLWHAGSNGRWNCSVVIAPEIDFAVLVACNRGWHSIAAWKTRQTLKALIRTFAPYRTS*
Ga0070692_101712673	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	AGWFISTASWAKGARPGDTGHYLWHGGRNGMSHSVVCIAPEIDFAVLVACNRDIAILKTRQTVKALIRTFAPYQSSDGLEAHSMKRLE*
Ga0070705_1010068171	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	GRRLWHAGSNGRWNCSVVIAPEIDFAVLVACNRGWHSIAAWKTRQTVKALIGSVLI*
Ga0068857_1012822802	3300005577	Corn Rhizosphere	QPGDTGRRLWHAGSAGRWNACVGIAPEIDFAVLAACNRGWKGIAAWKTRQALKELIRTFACK*
Ga0066653_105136572	3300006791	Soil	GDTGRSLWHGGRHGMSHSVVCIAPEIDFAVLVTCNHGIAIWKTRRTVKALIRTFAPKRTP
Ga0066665_102423201	3300006796	Soil	KGTQPGDTGRRLWHAGSNGRWNCGVFIAPEIDFAVLVACNRGLDIAAWKTRQTVKALIRTFAPKRTS*
Ga0066665_113171313	3300006796	Soil	APAVTYRAAWFISTASWAKGTQPGDTGRRLWHAGSNGRWNAAVFIAPEIDFAVLLACNRGWQGIAAWKTRQTVKALIRTFAPKRTP*
Ga0075421_1020158242	3300006845	Populus Rhizosphere	ASWAKGTQPGDTGRRLWHAGSNGRWNCGVVIAPEIDFAVLVACNRGIAAWKTRQTVKALIRTFAPKRQRH*
Ga0075430_1014619882	3300006846	Populus Rhizosphere	AVTYRAGWFISTASWAKGTQPGDTGRRLWHAGSNGRWGCGVVIAPEIDFAVLVACNRAIAAWKTRQTLKALIRTFAPKRTS*
Ga0075433_112479592	3300006852	Populus Rhizosphere	AGWFISTASWAKGARPGDTGHYLWHGGRNGMSHSVVCIAPEIDFAVLVACNRDIAILKTRQTVKALIRTFAPKRTS*
Ga0075420_1010558881	3300006853	Populus Rhizosphere	TASWAKGTQPGDTGRRLWHAGSNGRWNAGVVIAPEIDFAVLVACNRGIAAWKTRQTVKALIRAFAPQRTS*
Ga0075420_1016698881	3300006853	Populus Rhizosphere	RAGWFISTASWAKGTQPGDTGRRLWHAGSNGRWGCGVVIAPEIDFAVLVAFNRAIAAWKTRQTLKALIRTFAPKRTS*
Ga0075425_1028276312	3300006854	Populus Rhizosphere	SWAKGTQPGDTGRRLWHAGSNGRWNCSVVIAPEIDFAVLVACNRGWHSIAAWKTRQTLKALIRTFAPKRTS*
Ga0079215_117334951	3300006894	Agricultural Soil	GWFISTSSWAKGTQPGDTGRSLWHGGKEGMSHSVVCIAPEIDFAVLVACNHGIAIWKTRQTVKALIRTFAPKRTS*
Ga0079216_109999283	3300006918	Agricultural Soil	TYRAGWLISRASWAKGARPGDTGHYLWHGGRNGMSISVVCIAPEIDFAVLVACNRDIAILKTRQTVKALIRTFAPKRTS*
Ga0079218_117964731	3300007004	Agricultural Soil	ASWARGTRPGDTGRRLWHAGRIGRCIAGVFIAPEIDFAVLVACNRGGIAAWKTRQAVKTMIRTFALKRTS*
Ga0099793_104165171	3300007258	Vadose Zone Soil	TGRSLWHGGRHGMSHSVVVIAPEIDFAVLVACNHGIAAWKTRQTVKALIRTFAPKRTS*
Ga0111539_130744951	3300009094	Populus Rhizosphere	VTYCAGWFISTASWAKGTQPGDTGRRLWHGGREGMSHSIVVIAPEIDFAVLVACNRDIAIWKTRQTVKALIRTFRPNGPHDRPGSEVED*
Ga0066709_1030769562	3300009137	Grasslands Soil	RRLWHAGSNGRWNAGVVIAPEIDFAVLVACNRGIAAWKTRQTVKALIRTFAPKRTS*
Ga0066709_1041626431	3300009137	Grasslands Soil	RRLWHAGSNGRWNAGVVIAPEIDFAVLVACNRGIAAWKTRQAVKALIRAFAPKRTS*
Ga0114129_122279491	3300009147	Populus Rhizosphere	HAGSNGRWNCGVFLAPEIDFAVLVACNRGVDIAAWKTRQTVKALNRTFAPNRTS*
Ga0114129_133831962	3300009147	Populus Rhizosphere	AGSNGRWNCSVVIAPEIDFAVLVACNRGWHSIAAWKTRQTVKALIRTFAPKRTS*
Ga0105243_131375961	3300009148	Miscanthus Rhizosphere	PGDTGRRLWHAGSNGRWNCGVAIAPEIDFAVLVACNRGIAAWKTRQTLKALIRTFAPKRTS*
Ga0111538_115978781	3300009156	Populus Rhizosphere	LWHAGSNGRWTCGVVIAPEIDFAVLVACNRGIAAWKTRQTVKALIRTFAPKRTS*
Ga0111538_130496161	3300009156	Populus Rhizosphere	TGRRLWHAGSNGRWTCGVVIAPEIDFAVLVACNRGWGGIAAWKTRQALKALIRTFAPERAS*
Ga0116108_11857271	3300009519	Peatland	TRPGDTGRRLWTGESNGRWNCGVFIAPEIDFAVLVACNRGLDIAVWKTCQAAKALIRAFAPKRTS*
Ga0116137_11885712	3300009549	Peatland	TGRRLWTGGSNGRWNCGVFIAPEIDFAVLVACNRGLDIAVWKTCQAAKALIRAFAPKRTS
Ga0105249_113255501	3300009553	Switchgrass Rhizosphere	RAGWFISTSSWAKGTQPGDTGRSLWHGGRHGMSHSVVCIAPEIDFAVLVACNHGIAIGKTRQTVKALIRTFAPKQTS*
Ga0105347_10401581	3300009609	Soil	LATGDTAPAVSYRAGWLISTSSWAKGTRPGDTGRRLWHAGRIGRWGSGVVVAPEIDFAVLVACNRGIAAWKTRQTVKALIRTFAPKRTS*
Ga0105347_12423223	3300009609	Soil	RLWHAGSNGRWNCGVVIAPEIDFAVLVACNRGIAAWKTRQAVKALIRALAPKRTS*
Ga0116120_10161051	3300009641	Peatland	GGSNGRWNCGVFIAPEIDFAVLVACNRGLDIAVWKTCQAARALIRAFAPKRTS*
Ga0105252_103409982	3300009678	Soil	GITRLATGDAAPAVTYCAGWFISTASWAKGRPGDTGHYLWHGGRYGRSHSVVCIAPEIDFAVLVACNSDIAILKTRRTVKALIRTFAPKRTS*
Ga0116217_108497872	3300009700	Peatlands Soil	HGGSNGMSHCVASIAPEIDFAVLVACNRGLDIAIWKTRQAARALIRAFAPKRTS*
Ga0134111_102444142	3300010329	Grasslands Soil	RRLWHAGSNGRWNAAVFIAPEIDFAVLLACNRGWQGIAAWKTRQTVKALIRTFAPKRTP*
Ga0126376_115018222	3300010359	Tropical Forest Soil	AAPAVTYCAGWLISTASWARGTRPGDTGRRLWHGGRNARAGSGVAIAPEIDFAILAACNRDVAAWKMRQAVRELIRTFAPKRTS*
Ga0134066_100163234	3300010364	Grasslands Soil	RRLWHAGSNGRWNCGVVIAAEIDFAVLAACNRGMAAWKTRQTVKALIRTFAPKRTS*
Ga0126379_132319812	3300010366	Tropical Forest Soil	RRLWHGGRNARAGSGVVIAPEIDFAVLAACNRDVAGWKMRQALKAMIRTFAPKRTS*
Ga0134124_103912273	3300010397	Terrestrial Soil	GWFISTASWAKGARPGDTGHYLWHGGRNGMSHSVVCIAPEIDFAVLVACNRDIAILKTRQTVKALIRTFAPKQTSII*
Ga0134127_1000262811	3300010399	Terrestrial Soil	YRAGWFISTASWAKGTQPGDTGRRLWHAGSNGRWNCGVVIAPEIDFAVLVACNRGIAAWKTRQTVKALIRTFAPKRTS*
Ga0134123_121912272	3300010403	Terrestrial Soil	FISTSSWAKGTQPGDTGRRLWHAGSNGRWNCSVVIAPEIDFAVLVACNRGWHSIAAWKARQALKALIRTFAPKRTSR*
Ga0137325_10772041	3300011415	Soil	TGRYLWHAGSNGRWNCGVVIAPEIDFAVLVACNRGWHGIAAWKTRQTVKALIQAFAPKRTTCSVA*
Ga0137436_10235061	3300011423	Soil	KGTQPGDTGRRLWHGGSNGRWNCGVSIAPEIDFAVLVACNRGWLGIAAWKTRQTLKALIRTFAPKRTS*
Ga0137423_10011761	3300011430	Soil	GWFISTSSWAKGTQPGDTGRSLWHGGKEGMSHSVVCIAPEIDFAVLVACNQGIAIWKTRQTVKALIRTFATKRTS*
Ga0137433_12452771	3300011440	Soil	DAGPAVTYRAGWFISTASWAKGARPGDTGRRLWHGGRNGMSHSVVCIAPEIDFAVLVACNRDIAILKTRQTVKALIRTFAPKRTS*
Ga0137463_13488591	3300011444	Soil	PAVTYRAGWFISTASWAKGTRPGDTGRRLWHAGRIGRWGSGVVVAPEIDFAVLVARNRAIAAWKTRQTVKALIRTFAPKRTS*
Ga0137365_102368372	3300012201	Vadose Zone Soil	WFISTSSWAKGTQPGDTGRSLWHGGRHGMSHSVVVIAPEIDFAVLVACNHGIAIWKTRQTVKALIRTFAPKRTS*
Ga0137380_105815271	3300012206	Vadose Zone Soil	SWAKGTQPGDTGRSLWHGGRHGMSHSVVVLAPEIDFAVLVACNHGIAIWKTRQAVKALIRTFAPKRTP*
Ga0137378_103056161	3300012210	Vadose Zone Soil	GTQPGDTGRRLWHAGSNGRWNCGVFIAPEIDFAVLVACNRGIAAWKTRQTLKALIRTFAPKRTS*
Ga0137378_107826963	3300012210	Vadose Zone Soil	YRAGWFISTASWAKGARPGDTGHYLWHGGRNGMSHSVVCIAPEIDFAVLVACNRDIAILKTRQTVKALIRTFAPKRT*
Ga0137377_102503204	3300012211	Vadose Zone Soil	WHGGRQGMSLSVVCIAPEIDFAVLVACNRGIAWKTRQTVKALIRTFAPKRTP*
Ga0150985_1110049702	3300012212	Avena Fatua Rhizosphere	WHAGSNGRWNAGVVIAPEIDFAVLVACNRGIAAAWKTRQTVRALIRTFAPKRTSAYWPGSEVED*
Ga0137358_101620511	3300012582	Vadose Zone Soil	PGDTGRRLWHAGSNGRWNCGVVIAPEIDFAVLVACNRGIAAWKTRQTVKALIRTFAPKQT
Ga0137398_111491752	3300012683	Vadose Zone Soil	RLWHAGSNGRWNCGVVIAPEIDFAVLVACNRGIAAWKTRQTVKALIRTFAPKQT*
Ga0137397_103978462	3300012685	Vadose Zone Soil	AKGARPGDTGHYLWHGGRNGMSHSVVCIAPEIDFAVLVACNRGWQGIAAWKTRQTVKALIRTFAPKQTS*
Ga0137397_110656031	3300012685	Vadose Zone Soil	TRLAIGDAAPAVTYRTGWFISTSSWAKGTQPGDTGRSLWHGGRHGMSHSVVVIAPEIDFAVLVACNHGIAAWKTRQTVKALIRTFAPKRTS*
Ga0157303_100502621	3300012896	Soil	LLATGDAGPAVTYRAGWFISTSSWAKGTQPGDTGRRLWHGGRNGMSHSVVCIAPEIDFAVLVACNHGIAAWKTRQTVKALIRTFAPKRTS*
Ga0137394_103214883	3300012922	Vadose Zone Soil	GWFISTSSWAKGTQPGDTGRSLWHGGRHGMSHSVVCIAPEIDFAVLVACNHGIAAWKTRRTVKALVRTFAPKRTP*
Ga0137359_101387951	3300012923	Vadose Zone Soil	GRCLWHGGSNGISHSVVCIATEIDFAVLVACNRGWSGIAAWKTRQALKALIRTFAPKQTS
Ga0137359_105003501	3300012923	Vadose Zone Soil	GWLISTASWAKGTQPGDTGRRLWHAGSNGRWNCGVVIAPEIDFAVLVACNRGIAAWKTRQTVKALIRTFAPKQT*
Ga0137359_106046683	3300012923	Vadose Zone Soil	ASWAKGTQPGDTGRRLWHAGSNGRWNAGVVIAPEIDFAVLVACNRAIAAWKTRQTVKALIRTFAPKRTP*
Ga0137410_102402461	3300012944	Vadose Zone Soil	RRLWHAGSNGRWNCSVVIAPEIDFAVLVACNRGWLGIVVWKTRQALKALIRTFAPKRTL*
Ga0137410_104326471	3300012944	Vadose Zone Soil	PGDTGRRLWHAGSNGRWNCSVVIAPEIDFAVLVACNRGWHSIAAWKTRQALKALIRTFAPKRTS*
Ga0164306_117438671	3300012988	Soil	SWARGTRPGDTGRRLWHAGRIGRCIAGVFIAPEIDFAVLVACNRDIAILKTRQTVKALIRTFAPKRTS*
Ga0157375_123155211	3300013308	Miscanthus Rhizosphere	RGTQSGDTGRRLWHAGSNGRWGSAVVIAPEIDFAVLVACNRAIAAWKIRQTVKALIRTFAPKRPHDRTENKLGAAR*
Ga0134075_101014651	3300014154	Grasslands Soil	PAVTYCAGWLISTASWAKGTQPGDTGRRLWHGGKEGMSHSVVVIAPEIDFAVLVACNRGIAWNTRQTVKALIRTFAPKRTP*
Ga0181530_100339491	3300014159	Bog	DTGRRFWHGGSDGMSHSVVCIAPEIDFAVLVACNRGLDIAIWKTRQAARALIRAFAPKWTS*
Ga0163163_107783712	3300014325	Switchgrass Rhizosphere	VPAGLSGTSRWAKGAQPGDTGRRFWHGGSDGMSHSVVCIAPEIDFAVLVACNRGPDIAIWKTRQAVKALIRTFAPERTS*
Ga0182021_101182141	3300014502	Fen	RRLWTGGSNGRWNCVASIAPELDFAVLVACNRGLDIAVWKTCQAAKALIRAFAPKRTS*
Ga0182027_114721642	3300014839	Fen	GGSNGRWNCVASIAPELDFAVLVACNRGLDIAVWKTCQAARALIRAFAPKRTS*
Ga0180078_10499911	3300014865	Soil	TGRRLWHAGSNGRWNAGVFIAPEIDFAVLVACNHGIAAWKTRQAVKALIRTFAPKRTP*
Ga0180080_11025802	3300014870	Soil	GSNGRWNAGVFIAPEIDFAVLVACNRGWQGIAAWKTRQTVKALIRAFAPKQTS*
Ga0157379_105575092	3300014968	Switchgrass Rhizosphere	ASWAKGARPGDTGHYLWHGGRNGMSHSVACIAPEIDFAVLVACNRDIAILKTRQTVKALIRRFAPRRTSPKAEG*
Ga0157376_119223301	3300014969	Miscanthus Rhizosphere	AGSDGMSHSVVCIAPEIDFAVLVACNRGPHIAMWKTRRVVRALIRAFAPKRTSYWPGSEVEN*
Ga0180075_10339291	3300015252	Soil	TGRRLWHGGSNGMWNCGAFFAPEIDFAVLVACNRGIAAWKTRQTLKALIRTFAPKRTS*
Ga0132258_109035621	3300015371	Arabidopsis Rhizosphere	STASWAKGARPGDTGHYLWHGGREGMSHSIVVIAPEIDFAVLVACNRDIAILKTRRVVRALIRAFAPKQTSII*
Ga0132258_111851821	3300015371	Arabidopsis Rhizosphere	TGRRLWHAGSNGRWNCGVVIAPEIDFAVLVACNRGWHSIAAWKTRQTLMALIRTFAPKRTS*
Ga0132258_112989071	3300015371	Arabidopsis Rhizosphere	RGLNFLATGDAAPAVTYSAGWLISTASWARGTHPAHTGRRLWHAGRNARSGSAVVIAPEIDFGLLVACKRDVAAWKMRRAVKALIRTFAPKQTS*
Ga0132256_1006880791	3300015372	Arabidopsis Rhizosphere	GSNGRWNCGVVIAPEIDFAVLVACNRGWHSIAAWKTRQTLMALIRTFAPKRTS*
Ga0132257_1022197542	3300015373	Arabidopsis Rhizosphere	WHAGSNGRWNCGVVIAPEIDFAVLVACNRGSAAWKTRQTVKALIRTFAPKRTS*
Ga0132255_1033652861	3300015374	Arabidopsis Rhizosphere	LRDIGRRLWHAGSNGRWNAGVVIAPEIDFAVLIACNRAWLGIAAWKTGQTVKALIRTFAPKRTS*
Ga0134083_102203731	3300017659	Grasslands Soil	RLWHAGSNGRWNCGVVIAAEIDFAVLAACNRGMAAWKTRQTVKALIRTFAPKRTP
Ga0187877_13166631	3300017931	Peatland	PGDTGRRLWHGGSNGVSHSVAVIAPEIDFAVLVACNRGLDIALWKTCQVAKALIRTFAPKRIS
Ga0187873_10001071	3300018013	Peatland	RICHGGSNGMSHSVAFIAPEIDFAVLVACNRGLDIAIWKTRQAARALIRTFAPKRTS
Ga0187880_11346441	3300018016	Peatland	GTQPGDTGRSLWHGGRQGMSHSVVCIAPGIDFAVLVACNRGLDIAAWKTRQAAKALIRTFAPKRTS
Ga0187880_13744502	3300018016	Peatland	AKGTQPGDTGRRFWTGGSNGQWLCAAFIAPEIDFAVLVARNRGLDIAIWKTRQAAKALIRAFAPKRTS
Ga0187886_12814391	3300018018	Peatland	TGRRFWTGGSNGQWLCAAFIAPEIDFDVLVACKRGLDIAIWKTRQAARALIRAFAPKRIS
Ga0187881_103172471	3300018024	Peatland	WTGGSNGQWLCAAFIAPEIDFAVLVACNRGLDIALWKTRQAAKALIRTFAPKRTS
Ga0187885_100569912	3300018025	Peatland	FWTGGSNGQWLCAAFIAPEIDFAVLVACNRGLDIAIWKTRQAAKALIRAFAPKQTS
Ga0184618_103928981	3300018071	Groundwater Sediment	STSSWAKGTQPGDTGRSLWHGGRHGMSHSVVCIAPEIDFAVLVACNRGWLGIAAWKTRQTLKALIRTFAPKRTS
Ga0184625_100087241	3300018081	Groundwater Sediment	GWLISTASWAKGTQPGDTGRRLWHAGSNGRWNAGVFIAPEIDFAVLVACNRGWLGIAAWKTRQTVKALIRTFAPKRTS
Ga0190265_138433492	3300018422	Soil	RLWHAGSNGRWNCGVVIAPEIDFAVLVACNRGPDIAIWKTRRVVRALIRAFAPKRTS
Ga0190270_108558122	3300018469	Soil	ASWARGTRAGDTGRRLWHAGSNGRWNCAVVIAPEIDFAVLVACNRGWHSIAAWKTRQALKALIRTFAPKRTP
Ga0193701_11096421	3300019875	Soil	WAKGARPGDTGHYLWHGGRNGMSHSVVCIAPEIDFAVLVACNRDIAILKTRQTLKALIRTFAPKRTS
Ga0196964_104400851	3300020202	Soil	KGTQPGDTGRRLWHGGSNGRWNCGVCIAPEIDFAVLVACNRGWLGIAAWKTRQTLKALIRTFAPKRTS
Ga0210404_100653413	3300021088	Soil	SWAKGTRPGDTGHYLWHGGSDGMSHSVVCIAPEIDFAVLIACNRGPDFAIWKTRQAVKSLIRTFALKRTS
Ga0193719_102337621	3300021344	Soil	GSNGRWNCGVVIAPEIDFAVLVACNRGLDIAAWKTRQTVKALIRTFAPKRTS
Ga0210409_100399795	3300021559	Soil	AGWFISTASWAKGTQPADTGRRLWHAGSNGRWNCGVVIAPEIDFAVLVACNRGIAAWKTRQTVKALIRTFAPKRTS
Ga0247661_10539672	3300024254	Soil	ASWARGTRAGDTGHYLWHGGREEMSHSIVVIAPEIDFAVLVACNRGSQGIAAWKIRRTLKALIRTFAPEPTS
Ga0208562_10524241	3300025460	Peatland	KGTQPGDTGRRFWTGGSNGQWLCAAFIAPELDFAVLVACNRGLDIAVWKTLQVAKALIRAFAPKRTS
Ga0207670_100949661	3300025936	Switchgrass Rhizosphere	ARPGDTGRRLWHAGSNGRWNCGVVIAPEVDFAVLVACNRGWHSIAAWKTRQTLKALIRAFAPKRTS
Ga0207641_113775812	3300026088	Switchgrass Rhizosphere	GWLISTASWAKGTQPGDTGRRLWHAGSNGRWNCGVVIAPEIDFAVLVACNRGIAAWKTRQTVKALIRTFAPKRTS
Ga0207674_102406921	3300026116	Corn Rhizosphere	APAVTYCAGWFISTASWAKGARPVDTGHYLWHGGRNGMSHSVVCIAPEIDFAVLVACNRDIAILKTRQTVNALIRTFAPKLTS
Ga0209517_104086332	3300027854	Peatlands Soil	RPGDTGRRFWHGGSDGISHSVVCIAPEIDFAVLVACNRGLDIAVWKTRQAVKALIRTFTPKRTS
Ga0307296_105842122	3300028819	Soil	PAVTYCAGWFISTASWAKGTQPADTGRRLWHGGSNGRWNCGVVIAPEIDFAVLVACNRDIAILKTRQTVKALIRTFAPKQTS
Ga0302177_105507082	3300030053	Palsa	RPGDTGRRLSHGGSNGRWNCIVSIAPEIDFDVLVACNRGLDIAVWKTYQATKALIRAFAPKLTSR
Ga0316363_103833041	3300030659	Peatlands Soil	KGTRPGDTGRRFWHGGSDGISHSVVCIAPEIDFAVLVACNRGIAAWKTRQTVKALIRTFAPKRTS
Ga0170824_1143932211	3300031231	Forest Soil	LISTASWARGTRSGDTGRRLWHAGSNGRWNCGVVIAPEIDFAVLVACNRGWHSIAAWKTRQTLKALIRAFAPKQTS
Ga0307469_113835341	3300031720	Hardwood Forest Soil	WLISTASWAKGTQPGDTGRRLWHAGSNGRWNCGVVIAPEIDFAVLVACNRGWRGIAAWKTRQAVKALIRTFAPKRTS
Ga0310912_106851591	3300031941	Soil	GDAGPAVIYRAGWFISTASWAKGTYSGHTGRCLWHGGSNGISHSVVCIAPEIDFAVLVACNGPITVIWKTRRMVRALIRRFATMG
Ga0306924_106455292	3300032076	Soil	RRLWHGGSDGMSHSGVSIAPEIDFAVLVVCNRGLDIAVWKTRQAVRALIRAFASKRAS
Ga0306924_119284921	3300032076	Soil	TGRRLWHGGSDGMSHSGVSIAPEIDFAVLVACNRGLDIAVWKTRQAVRALIRAFAPKRTS
Ga0315910_107051112	3300032144	Soil	RLWHAGSNGRWNSGVAIAPEIDFAVLVACNRGVDIAAWKARQAVKALIRTFAPKRTS
Ga0315287_119166062	3300032397	Sediment	LWHGGSNGMSHSTTFIAPEIDFAVLVACNRGLDIAIWKTRQAARALIRTFAPKRTS
Ga0335084_111960211	3300033004	Soil	GNTGRHFWHGGSNGISHTVTCIAPEIDFAVLVACNRGLDIAVWNTRQVVRALIRTFAPERTS
Ga0316627_1023700922	3300033482	Soil	RCLWHGGSNGISHTVVCIAPEIDFAVLVACNRGLDIAIWKTREAVKSLIRTYS
Ga0316616_1039920492	3300033521	Soil	TGRRLWTGGSNGQWLCAAIIAPEIDFAVLVACNRGLDIAIWKSRQAARTLIRTFAPKLNS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F069946

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences