NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F069945

Metagenome / Metatranscriptome Family F069945

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F069945
Family Type Metagenome / Metatranscriptome
Number of Sequences 123
Average Sequence Length 70 residues
Representative Sequence VVLDVHHVEIRIPKGDLEIRSERPSAWSVVREPHLVCPGCHARTVIPEGRKDAKCHECGRSYAIDWKDSG
Number of Associated Samples 100
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 10.57 %
% of genes near scaffold ends (potentially truncated) 82.93 %
% of genes from short scaffolds (< 2000 bps) 86.18 %
Associated GOLD sequencing projects 95
AlphaFold2 3D model prediction Yes
3D model pTM-score0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (95.122 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(35.772 % of family members)
Environment Ontology (ENVO) Unclassified
(41.463 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(52.846 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 3.06%    β-sheet: 12.24%    Coil/Unstructured: 84.69%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF06210DUF1003 41.46
PF00326Peptidase_S9 19.51
PF0563523S_rRNA_IVP 17.07
PF00166Cpn10 4.07
PF02897Peptidase_S9_N 4.07
PF00271Helicase_C 1.63
PF05193Peptidase_M16_C 0.81
PF00270DEAD 0.81
PF027373HCDH_N 0.81
PF10150RNase_E_G 0.81
PF06491Disulph_isomer 0.81
PF01416PseudoU_synth_1 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG4420Uncharacterized membrane proteinFunction unknown [S] 41.46
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 4.07
COG1505Prolyl endopeptidase PreP, S9A serine peptidase familyAmino acid transport and metabolism [E] 4.07
COG1770Protease IIAmino acid transport and metabolism [E] 4.07
COG0101tRNA U38,U39,U40 pseudouridine synthase TruATranslation, ribosomal structure and biogenesis [J] 0.81
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.81
COG0287Prephenate dehydrogenaseAmino acid transport and metabolism [E] 0.81
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 0.81
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 0.81
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 0.81
COG1748Saccharopine dehydrogenase, NADP-dependentAmino acid transport and metabolism [E] 0.81
COG20843-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenaseLipid transport and metabolism [I] 0.81

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.12 %
UnclassifiedrootN/A4.88 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002560|JGI25383J37093_10062069All Organisms → cellular organisms → Bacteria1180Open in IMG/M
3300002908|JGI25382J43887_10012737All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes4336Open in IMG/M
3300002908|JGI25382J43887_10210143All Organisms → cellular organisms → Bacteria928Open in IMG/M
3300002908|JGI25382J43887_10233689All Organisms → cellular organisms → Bacteria858Open in IMG/M
3300002912|JGI25386J43895_10039950All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1370Open in IMG/M
3300004479|Ga0062595_100451481All Organisms → cellular organisms → Bacteria944Open in IMG/M
3300005171|Ga0066677_10066169All Organisms → cellular organisms → Bacteria1845Open in IMG/M
3300005178|Ga0066688_10426574All Organisms → cellular organisms → Bacteria859Open in IMG/M
3300005184|Ga0066671_10077837All Organisms → cellular organisms → Bacteria1776Open in IMG/M
3300005334|Ga0068869_101508491All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes597Open in IMG/M
3300005336|Ga0070680_101246063All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes643Open in IMG/M
3300005341|Ga0070691_10240070All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes968Open in IMG/M
3300005341|Ga0070691_10552738All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes673Open in IMG/M
3300005441|Ga0070700_100208688All Organisms → cellular organisms → Bacteria1377Open in IMG/M
3300005446|Ga0066686_10500526All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium827Open in IMG/M
3300005447|Ga0066689_10764160All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300005468|Ga0070707_102255043All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium512Open in IMG/M
3300005536|Ga0070697_101847948All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes540Open in IMG/M
3300005545|Ga0070695_101786500All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes516Open in IMG/M
3300005549|Ga0070704_100282468All Organisms → cellular organisms → Bacteria1376Open in IMG/M
3300005566|Ga0066693_10302483All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes639Open in IMG/M
3300005598|Ga0066706_10601295All Organisms → cellular organisms → Bacteria873Open in IMG/M
3300006791|Ga0066653_10550557All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes584Open in IMG/M
3300006796|Ga0066665_10783772All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes753Open in IMG/M
3300006797|Ga0066659_10083524All Organisms → cellular organisms → Bacteria2126Open in IMG/M
3300006800|Ga0066660_10718002All Organisms → cellular organisms → Bacteria819Open in IMG/M
3300006845|Ga0075421_101332096All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium793Open in IMG/M
3300006845|Ga0075421_102238605All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300006845|Ga0075421_102551290All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300006847|Ga0075431_101079079Not Available768Open in IMG/M
3300006852|Ga0075433_11116402All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes685Open in IMG/M
3300006854|Ga0075425_100662540Not Available1199Open in IMG/M
3300006871|Ga0075434_101870034All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes606Open in IMG/M
3300006954|Ga0079219_10099502All Organisms → cellular organisms → Bacteria1423Open in IMG/M
3300007255|Ga0099791_10009350All Organisms → cellular organisms → Bacteria4070Open in IMG/M
3300009012|Ga0066710_100255272All Organisms → cellular organisms → Bacteria2540Open in IMG/M
3300009090|Ga0099827_10006850All Organisms → cellular organisms → Bacteria7024Open in IMG/M
3300009090|Ga0099827_11311973Not Available630Open in IMG/M
3300009090|Ga0099827_11738600All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300009094|Ga0111539_13239083All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes525Open in IMG/M
3300009137|Ga0066709_103316242All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes586Open in IMG/M
3300009804|Ga0105063_1004284All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1348Open in IMG/M
3300010126|Ga0127482_1008324All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium528Open in IMG/M
3300010301|Ga0134070_10392634All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium546Open in IMG/M
3300010304|Ga0134088_10034895All Organisms → cellular organisms → Bacteria2279Open in IMG/M
3300010323|Ga0134086_10069437All Organisms → cellular organisms → Bacteria1215Open in IMG/M
3300010329|Ga0134111_10063002All Organisms → cellular organisms → Bacteria1369Open in IMG/M
3300010397|Ga0134124_10400992All Organisms → cellular organisms → Bacteria1305Open in IMG/M
3300010403|Ga0134123_11601487All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes699Open in IMG/M
3300011434|Ga0137464_1076119Not Available967Open in IMG/M
3300012034|Ga0137453_1040230All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300012161|Ga0137336_1023540All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1095Open in IMG/M
3300012198|Ga0137364_11028161All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300012198|Ga0137364_11124097Not Available591Open in IMG/M
3300012199|Ga0137383_10027555All Organisms → cellular organisms → Bacteria3975Open in IMG/M
3300012200|Ga0137382_10190982All Organisms → cellular organisms → Bacteria1404Open in IMG/M
3300012200|Ga0137382_10376480All Organisms → cellular organisms → Bacteria998Open in IMG/M
3300012201|Ga0137365_10024570All Organisms → cellular organisms → Bacteria4660Open in IMG/M
3300012202|Ga0137363_11567693All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium550Open in IMG/M
3300012203|Ga0137399_10163246All Organisms → cellular organisms → Bacteria1788Open in IMG/M
3300012203|Ga0137399_10263366All Organisms → cellular organisms → Bacteria1416Open in IMG/M
3300012204|Ga0137374_10232261All Organisms → cellular organisms → Bacteria1561Open in IMG/M
3300012204|Ga0137374_11178944All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes538Open in IMG/M
3300012208|Ga0137376_10701492All Organisms → cellular organisms → Bacteria → Proteobacteria873Open in IMG/M
3300012208|Ga0137376_11205912All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes646Open in IMG/M
3300012211|Ga0137377_10798704All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium876Open in IMG/M
3300012211|Ga0137377_11647068All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes564Open in IMG/M
3300012285|Ga0137370_10079659All Organisms → cellular organisms → Bacteria1813Open in IMG/M
3300012285|Ga0137370_10160595All Organisms → cellular organisms → Bacteria1304Open in IMG/M
3300012349|Ga0137387_10499476All Organisms → cellular organisms → Bacteria883Open in IMG/M
3300012354|Ga0137366_10600468All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300012355|Ga0137369_10044226All Organisms → cellular organisms → Bacteria3954Open in IMG/M
3300012362|Ga0137361_10361135All Organisms → cellular organisms → Bacteria1333Open in IMG/M
3300012532|Ga0137373_10731654All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes735Open in IMG/M
3300012532|Ga0137373_10741271All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes729Open in IMG/M
3300012532|Ga0137373_10852531All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes671Open in IMG/M
3300012917|Ga0137395_10998947All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes599Open in IMG/M
3300012918|Ga0137396_10237175All Organisms → cellular organisms → Bacteria1344Open in IMG/M
3300012922|Ga0137394_10277580All Organisms → cellular organisms → Bacteria1433Open in IMG/M
3300012922|Ga0137394_11561632All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium517Open in IMG/M
3300012925|Ga0137419_11191200All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes637Open in IMG/M
3300012929|Ga0137404_11011759All Organisms → cellular organisms → Bacteria760Open in IMG/M
3300012930|Ga0137407_10888992All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes842Open in IMG/M
3300012930|Ga0137407_11305263All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes689Open in IMG/M
3300012930|Ga0137407_12249261All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium521Open in IMG/M
3300012976|Ga0134076_10006246All Organisms → cellular organisms → Bacteria3945Open in IMG/M
3300015052|Ga0137411_1321572All Organisms → cellular organisms → Bacteria1731Open in IMG/M
3300015054|Ga0137420_1194506All Organisms → cellular organisms → Bacteria1720Open in IMG/M
3300015054|Ga0137420_1406054All Organisms → cellular organisms → Bacteria4810Open in IMG/M
3300015254|Ga0180089_1128716All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes527Open in IMG/M
3300015358|Ga0134089_10288949All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes678Open in IMG/M
3300017656|Ga0134112_10363020All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium592Open in IMG/M
3300017657|Ga0134074_1143176All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes834Open in IMG/M
3300017997|Ga0184610_1158139All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes746Open in IMG/M
3300018031|Ga0184634_10050303All Organisms → cellular organisms → Bacteria1721Open in IMG/M
3300018056|Ga0184623_10171811All Organisms → cellular organisms → Bacteria1000Open in IMG/M
3300018082|Ga0184639_10219464All Organisms → cellular organisms → Bacteria1007Open in IMG/M
3300018468|Ga0066662_10018257All Organisms → cellular organisms → Bacteria3863Open in IMG/M
3300019487|Ga0187893_10307047Not Available1126Open in IMG/M
3300019879|Ga0193723_1000268All Organisms → cellular organisms → Bacteria19752Open in IMG/M
3300019882|Ga0193713_1102302All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes797Open in IMG/M
3300020003|Ga0193739_1000060All Organisms → cellular organisms → Bacteria25496Open in IMG/M
3300024330|Ga0137417_1432841All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1617Open in IMG/M
3300025910|Ga0207684_10519508All Organisms → cellular organisms → Bacteria1020Open in IMG/M
3300025942|Ga0207689_10812122All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes789Open in IMG/M
3300026285|Ga0209438_1034403All Organisms → cellular organisms → Bacteria1681Open in IMG/M
3300026285|Ga0209438_1122897All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium720Open in IMG/M
3300026298|Ga0209236_1037652All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2520Open in IMG/M
3300026313|Ga0209761_1001436All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes15432Open in IMG/M
3300026313|Ga0209761_1098434All Organisms → cellular organisms → Bacteria1468Open in IMG/M
3300026528|Ga0209378_1009269All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes6055Open in IMG/M
3300026538|Ga0209056_10211781All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1408Open in IMG/M
3300026542|Ga0209805_1292063All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes620Open in IMG/M
3300026557|Ga0179587_10264631All Organisms → cellular organisms → Bacteria1103Open in IMG/M
3300027655|Ga0209388_1064607All Organisms → cellular organisms → Bacteria1055Open in IMG/M
3300027778|Ga0209464_10195929All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300027875|Ga0209283_10971337All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium508Open in IMG/M
3300027886|Ga0209486_10157635All Organisms → cellular organisms → Bacteria1256Open in IMG/M
3300027909|Ga0209382_12016531All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300027909|Ga0209382_12292581All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300028884|Ga0307308_10115546All Organisms → cellular organisms → Bacteria1280Open in IMG/M
3300031114|Ga0308187_10009211All Organisms → cellular organisms → Bacteria1960Open in IMG/M
3300034659|Ga0314780_165002All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium556Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil35.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil10.57%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil10.57%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere8.13%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil7.32%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.06%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil3.25%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.25%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.63%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.63%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.81%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.81%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.81%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks0.81%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002912Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cmEnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009804Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40EnvironmentalOpen in IMG/M
3300010126Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011434Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2EnvironmentalOpen in IMG/M
3300012034Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT526_2EnvironmentalOpen in IMG/M
3300012161Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT300_2EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015052Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015254Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10DEnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019487White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaGEnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300020003Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027778Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300031114Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034659Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25383J37093_1006206933300002560Grasslands SoilIRIPKGDVEIRDQRPNAWSVVRXPXLVCPGCHARTVIPEGKREAXCHECGRSYAIDWKDSG*
JGI25382J43887_1001273713300002908Grasslands SoilAKDYVVLDVHHVEVRIPKGDVEIRSDRPTTWSVVREPHLVCPGCHTRTVIPEGRKDAKCHECGRTYAIDWKDAS*
JGI25382J43887_1021014313300002908Grasslands SoilIRIERPNAWSVVREPHLVCPGCHTRTVVPEGRKDAKCHECGRGYPIDWKDTG*
JGI25382J43887_1023368913300002908Grasslands SoilGDLEIRSERPNAWSVVREPHLVCPGCHARTVIPEGRKDAKCHECGRTYAIDWKDSG*
JGI25386J43895_1003995013300002912Grasslands SoilRGDIEIRGDRPKNWSVVREPHVVCPGCHARAVIPEGRKDAKCSECGRTYAIDWKDAG*
Ga0062595_10045148133300004479SoilLDVHHVEIRVPKTDLEIRDQTPTAWSVVREPHLVCPGCATRAVVPEGMKDAKCNECGRVYPINWKDSA*
Ga0066677_1006616913300005171SoilDLEIRDQRPSSWSVVREPHLVCPGCHARTVIPEGRKDAKCAECSRSYPIDWRDTA*
Ga0066688_1042657413300005178SoilKDYVVLDVHHVEVRIPKGDVEIRGERPNAWSVVREPHLVCPGCHSRTVIAEGKKDAKCGECGRSYPIDWKDTA*
Ga0066671_1007783733300005184SoilLDVHHVEIRIPKGDLEIRDQRPSSWSVVREPHLVCPGCHARTVIAEGRKDAKCGECGRSYPIDWRDTA*
Ga0068869_10150849123300005334Miscanthus RhizosphereGGSLVADLEIRDQTPTAWSVVREPHLVCPGCATRAVVPEGMKDAKCNECGRVYPINWKDSA*
Ga0070680_10124606323300005336Corn RhizosphereIRVPKTDLEIRGQRPSAWSVVREPHLVCPGCASRAVIPEGMKDAKCNECGRAYPIDWKDSA*
Ga0070691_1024007023300005341Corn, Switchgrass And Miscanthus RhizosphereVENPQKDYVVLDVHHVEIRVPKTDLEIRDQSPTAWSVVREPHLVCPGCASRAVVPEGMKDAKCNECGRVYPINWKDSA*
Ga0070691_1055273813300005341Corn, Switchgrass And Miscanthus RhizosphereHVEIRVPKTDLEIRGQRPSAWSVVREPHLVCPGCASRAVIPEGMKDAKCNECGRAYPIDWKDSA*
Ga0070700_10020868833300005441Corn, Switchgrass And Miscanthus RhizosphereVENPQKDYVVLDVHHVEIRVPKTDLEIRDQTPTAWSVVREPHLVCPGCATRAVVPEGMKDAKCNECGRVYPINWKDSA*
Ga0066686_1050052613300005446SoilPKGDLEIRGQRPTTWSVVRQPHLVCPGCASRAVIPEGMKDAKCNECGRAYPIDWKDAG*
Ga0066689_1076416023300005447SoilRVPKGDLEVRNQRPSAWSVVRQPHLVCPGCASRAVIPEGMKDAKCNECGRVYPIDWKDAG
Ga0070707_10225504313300005468Corn, Switchgrass And Miscanthus RhizosphereRVVENPPKDYVVLDVHHVEIRIPKGDLEIRSERPSAWSVVREPHLVCPGCHARTVVPEGRKDAKCHECGRSYAIDWKDSG*
Ga0070697_10184794823300005536Corn, Switchgrass And Miscanthus RhizospherePKDYVVLDVHHVEVRIPKGDVEIRNERPNAWSVVREPHLVCPGCHARTVITEGKKDAKCHECGRSYPIDWKDAG*
Ga0070695_10178650023300005545Corn, Switchgrass And Miscanthus RhizosphereKTDLEIRDQSPTAWSVVREPHLVCPGCATRAVVPEGMKDAKCNECGRVYPINWKDAG*
Ga0070704_10028246813300005549Corn, Switchgrass And Miscanthus RhizosphereNPPKDYVVLDVHHVEIRIPKGDLEIRSERPSAWSVVREPHLVCPGCHARTVVPEGRKDAKCHECGRTYAIDWKDSG*
Ga0066693_1030248313300005566SoilKDYVVLDVHHVEVRIPKGDVEIRTERPNAWSVVREPHLVCPGCHARAVIPEGQKNAKCGECGRTFPVDWKDAG*
Ga0066706_1060129513300005598SoilGDLEIRNDRPNAWSVVREPHLVCPGCHARAVIPEGQKNAKCSECGRSYLIDWKDAG*
Ga0066653_1055055713300006791SoilTAKDYVVVDVHHVEIRVEKKDLDIRGERPKAWSVVRQPHLVCPGCAARAVVPEGMKDAKCNECGRAFPIDWKDSS*
Ga0066665_1078377213300006796SoilYVVLDVHHVEVRIPKGDLEIRNDRPNAWSVVREPHLVCPGCHARAVIPEGQKNAKCSECGRSYLIDWKDAG*
Ga0066659_1008352413300006797SoilVEIRIPKGDVEIRNERPNAWSVVREPHVVCPGCHARTVVPEGRKDAKCHECGRSYAIDWKDSG*
Ga0066660_1071800213300006800SoilYVVLDVHHVEIRIPKGDLEIRDQRPSSWSVVREPHLVCPGCHARTVIAEGRKDAKCGECGRSYPIDWRDTA*
Ga0075421_10133209613300006845Populus RhizosphereVRMERGNLEIRKDPPKAWSVVREPHLVCPGCHARYVVAEGAKDAKCPECSRNYPIDWKDAG*
Ga0075421_10223860513300006845Populus RhizosphereKEDLEIRGKPPTSWSVVRQPHLVCPGCCTRAVIPEGMKDAKCNECGRVYPIDWKDSA*
Ga0075421_10255129013300006845Populus RhizosphereVRMERGNLEIRKDPPKAWSVVREPHLVCPGCHARYVVAEGAKDAKCPECARTYPIDWKDAG*
Ga0075431_10107907923300006847Populus RhizosphereVVDVHHVEIRVPKGDLDIRSQRPTAWSVVRQPHLVCPGCSSRAVVPEGMKDAKCNECSRVYPIDWKDAG*
Ga0075433_1111640213300006852Populus RhizosphereAWYRVVENPPKDFVVLDVHQVEVRIPKGDVEIRGERPGAWSVVREPHLVCPGCHARSVIPEGQKNAKCSECGRTYPIDWKDDG*
Ga0075425_10066254013300006854Populus RhizosphereDVHHVEIRVEKQDLEIRGQRPTAWSVVRQPHLVCPGCATRAVIPEGMKDAKCNECGRVFPIDWKDSS*
Ga0075434_10187003423300006871Populus RhizosphereHVEIRIPKGDVEIRNERPNAWSVVREPHVVCPGCHARSVVPEGRKDAKCHECGRTYAIDWKDVG*
Ga0079219_1009950233300006954Agricultural SoilVVLDVHHVEIRIPKGDLEIRSERPSAWSVVREPHLVCPGCHARTVIPEGRKDAKCHECGRSYAIDWKDSG*
Ga0099791_1000935023300007255Vadose Zone SoilMVENPPKDYVVLDVHHVEVRIPKGDLEIRSDRPKNWSVVREPHVVCPACHARAIIPEGRKDAKCGECGKTYPIDWQDAG*
Ga0066710_10025527213300009012Grasslands SoilIPKGDLEIRNERPNGWSVVREPHLVCPGCHSRAVVPEGKQEAKCHECGRTYPIDWKDAS
Ga0099827_1000685033300009090Vadose Zone SoilVVEDPPKDYVVLDVHHVEIRILRGDIEIRGDRPKNWSVVREPHVVCPGCHARAVIPEGRKDAKCSECGRTYGIDWKDAG*
Ga0099827_1131197313300009090Vadose Zone SoilVELRKDPPKNWSVVREPHLVCPGCDSRHVIPEGAKDARCRECGRTYAIDWQDNA*
Ga0099827_1173860023300009090Vadose Zone SoilVVLDVHHVEVRIPKGDLEIRGDRPKTWSVVREPHLVCPGCHTRTVIPEGRKDAKCHECSRTYAIDWKDAS*
Ga0111539_1323908313300009094Populus RhizosphereVVENPQKDYIVLDVHHVEIRVPKTDLEIRDQTPTAWSVVREPHLVCPGCASRAVVPEGMKDAKCNECGHVYP
Ga0066709_10331624223300009137Grasslands SoilVEDPPKDYVVLDVHHVEIRIPKGDIEIRGERPKAWSVVREPHLVCPGCHARTVIPEGQKDAKCFECGRTYPIDWKVVG*
Ga0105063_100428423300009804Groundwater SandNPPKDYVVLDVHHVEIRIPKGDLEIRNERPSAWSVVREPHVVCPGCHARTVVPEGRKDAKCHECGRTYAIDWKDAG*
Ga0127482_100832413300010126Grasslands SoilAKDYVVLDVHHVEIRIPKRDLEIRSERPNGWSVVREPHLVCPGCHARTVIAEGRKDATCHECGRSYPIDWKDAG*
Ga0134070_1039263413300010301Grasslands SoilQKDYVVLDVHHVEIRIPKGDVEIRSERPNAWSVVREPHLVCPGCHARTVIPEGRKDAKCHECGRTYAIDWKDSG*
Ga0134088_1003489543300010304Grasslands SoilVEDPPKDYVVLDVHHVEIRILRGDIEIRGDRPKNWSVVREPHVVCPGCHARAVIPEGRKDAKCSECGRTYGIDWKDVG*
Ga0134086_1006943713300010323Grasslands SoilHVEIRIPKGDVEIRAERPNAWSVVREPHLVCPGCHDRAVIPEGQKNAKCSECGRTFLVDWKDAG*
Ga0134111_1006300213300010329Grasslands SoilIRIPKGDVEIRNERPNAWSVVREPHVVCPGCHARTVVPEGRKDAKCHECGRSYAIDWKDSG*
Ga0134124_1040099213300010397Terrestrial SoilVVENPQKDYIVLDVHHVEIRVPKTDLEIRDQTPTAWSVVREPHLVCPGCATRAVVPEGMKDAKCNECGRVYPINWKDSA*
Ga0134123_1160148723300010403Terrestrial SoilKTDLEIRDQSPTAWSVVREPHLVCPGCATRAVVPEGMKDAKCNECGLVYPINWKDAG*
Ga0137464_107611923300011434SoilLDVHHVEIRIPKGDVEIHTERPNAWSVVREPHLVCPGCHARAVIPEGQKSAKCSECSRTFPIDWKDAG*
Ga0137453_104023013300012034SoilHVEVRIPKEDLEIRNGAPVAWSVVREPHVVCPGCHSRAIIPEGKKDAKCSECGKTYPIDWKDAG*
Ga0137336_102354023300012161SoilRVVENPAKDYVVLDVHHVEIRIPKGDVEIHTERPNAWSVVREPHLVCPGCHARAVIPEGQKSAKCSECSRTFPIDWKDAG*
Ga0137364_1102816123300012198Vadose Zone SoilVEDETKDYVVLDVHHVEVRIARGDVEVRKDAPKTWSVVREPHLVCPGCHQRYVVAEGAKDAKCPECSRTYAIDWKDAG*
Ga0137364_1112409713300012198Vadose Zone SoilVVDVHHVEIRVEKKDLDIRSERPKAWSVVRQPHLVCPGCAARAVVPEGMKDAKCNECGRAFPIDWKDSS*
Ga0137383_1002755513300012199Vadose Zone SoilPKGDLEVRGQRPTAWSVVRQPHLVCPGCASRAVIPEGMKDAKCNECGRVYPIDWKDAG*
Ga0137382_1019098223300012200Vadose Zone SoilVENPPKDYVVLDVHHVEIRIPKGDVEVRNERPNAWSVVREPHVVCPGCHARAVVPEGRKDAKCHECGRSYAIDWKDSG*
Ga0137382_1037648013300012200Vadose Zone SoilPKDFVVLDVHHVEIRIPKADLEIRSERPSAWSVVRQPHLVCPGCHARTVIPENRKDAKCHECGRSYAIDWKDSG*
Ga0137365_1002457053300012201Vadose Zone SoilYVVLDVHHVEVRMSRGDLEVRKEAPKVWSVVREPHLVCPGCHARYVVAEGAKDAKCPECSRTYPIDWKDAG*
Ga0137363_1156769313300012202Vadose Zone SoilHHVEIRIPKGDLEIRDHRPHAWSVVREPHLVCPGCHSRTVIAEGKKDAKCSECGRTYPIDWKDAG*
Ga0137399_1016324633300012203Vadose Zone SoilEVRIPRGDLEIRKDPPKTWSVVREPHLVCPGCHARDVVAEGAKDAKCPECGRSYPIDWKDAG*
Ga0137399_1026336633300012203Vadose Zone SoilDEKKDYVVLDVHHVEVRMSRGDLEIRKDSPKTWSVVREPHLVCPGCHARYVVAEGAKDAKCPECSRSYPIDWKDAG*
Ga0137374_1023226133300012204Vadose Zone SoilVENPPKDYVVLDVHHVEIRIPKGDLDIRAERPNSWSVVREPHLVCPGCHARTVIAEGRKDAKCHECGRTYPIDWKD
Ga0137374_1117894413300012204Vadose Zone SoilKDYVVVDVHHVEIRIAKGDLEIRTGRPDAWSVVREPHVVCPGCHARAIIPEGKKDAKCSECGRTYPIDWKDAG*
Ga0137376_1070149233300012208Vadose Zone SoilDLEIRSERPSAWSVVRQPHLVCPGCHARTVIPESRKDAKCHECGRSYAIDWKDAG*
Ga0137376_1120591213300012208Vadose Zone SoilAWYRVVENPQKDYVVVDVHHVEIRVPKGDLEIRGQRPTTWSVVRQPHLVCPGCASRAVIPEGMKDAKCNECGRAYPIDWKDAG*
Ga0137377_1079870413300012211Vadose Zone SoilVENPPKDYVVLDVHHVEIRIPKGDVEVRNERPNAWSVVREPHVVCPGCHARAVVPEGRKDAKCHECGRSYAIDWKDAG*
Ga0137377_1164706813300012211Vadose Zone SoilVVEDPPKDYVVLDVHHVEIRIPKGDIEIRGERPKAWSVVREPHLVCPGCHSRTVIPEGKKDAKCFECGRTYPIDWKDAG*
Ga0137370_1007965913300012285Vadose Zone SoilENTPKDYVVLDVHHVEIRISKGDVELRQERPDAWSVVREPHLVCPGCHARSVIPEGQKNAKCGECGRTFAIDWKDAG*
Ga0137370_1016059543300012285Vadose Zone SoilHHVEIRIPKGDVEVRQDRPNAWSVVREPHLVCPGCHARAVIPESQKNAKCSECNRTYAIDWKDSG*
Ga0137387_1049947613300012349Vadose Zone SoilPKGDVEIRSERPNAWSVVREPHLVCPGCHARTVIPEGRKDAKCHECGRTYAIDWKDSG*
Ga0137366_1060046813300012354Vadose Zone SoilVEVRMSRGDLEVRKEPPKVWSVVREPHLVCPGCHARYVVAEGAKDAKCPECSRTYPIDWKDAG*
Ga0137369_1004422633300012355Vadose Zone SoilVENPPKDYVVLDVHHVEIRIPKGDLDIRAERPNSWSVVREPHLVCPGCHARTVIAEGRKDAKCHECGRTYPIDWKDAG*
Ga0137361_1036113513300012362Vadose Zone SoilPKDYVVLDVHHVEVRIPKGDVEIRGERPNAWSVVREPHLVCPGCHARTVIPEGRKDAKCHECGRSYPIDWKDSG*
Ga0137373_1073165423300012532Vadose Zone SoilYRVVESTPKDYVVLDVHHVEVRIPKGDIEIRSERPNTWSVVREPHLVCPGCHARTVIPEGKREAKCHECGRSYPIDWKDAG*
Ga0137373_1074127123300012532Vadose Zone SoilDDLEIRTDPPKGWSVVREPHLVCPGCARRHVVREGAKDAKCPECGRTYPVDWKDNA*
Ga0137373_1085253123300012532Vadose Zone SoilVEHPPKDFVVLDVHHVEIRIPKADLEIRSERPSAWSVVRQPHLVCPGCHARTVIPENRKDAKCHECGRSYAIDWKDSG*
Ga0137395_1099894723300012917Vadose Zone SoilDLEIRNERPNAWSVVREPHLVCPGCHSRTVIAEGNKDAKCSECGRSYAIDWKDAG*
Ga0137396_1023717533300012918Vadose Zone SoilGDLEIRKDPPKTWSVVREPHLVCPGCHARDVVAEGAKDAKCPECGRSYPIDWKDAG*
Ga0137394_1027758033300012922Vadose Zone SoilIPKGDVEIRSERPNGWSVVREPHLVCPGCHSRTVIAEGKKDAKCSECGRTYPIDWKDAG*
Ga0137394_1156163213300012922Vadose Zone SoilREYVVVDVHHVEIRIPKGDLEIRGGRPDAWSVVREPHVVCPGCHARAIIPEGKKDAKCGECGRTYPIDWKDVG*
Ga0137419_1119120023300012925Vadose Zone SoilAARRVVSRRRKPAKEYVVLDVHHVEVRIPKGDIELRGERPSTWSVVREPHLVCPACHARAIIPEGKKDAKCGECGKTYPIDWKDSG*
Ga0137404_1101175923300012929Vadose Zone SoilVENPPKDYVVLDVHHVEIRIPKGDVEIRNERPNAWSVVREPHVVCPGCHARAVVPEGRKDAKCHECGRSYAIDWKDSG*
Ga0137407_1088899213300012930Vadose Zone SoilVENPPKDYVVLDVHHVEIRIPKGDVEIRNERPNAWSVVREPHVVCPGCHARAVVPEGRKDAKCHECGRSYAIDWKDAG*
Ga0137407_1130526313300012930Vadose Zone SoilVENPPKDFVVLDVHHVEIRIPKGDLEIRAERPNGWSVVREPHLVCPGCHARTVIAEGRKDAKCHECGRSYPIDWKDAG*
Ga0137407_1224926123300012930Vadose Zone SoilVVLDVHHVEVRIARGDVEIRKDPPKTWSVVREPHLVCPGCHQRYVVAEGAKDAKCPECSRTYAIDWKDAG*
Ga0134076_1000624623300012976Grasslands SoilVVEDPPKDYVVLDVHHVEIRILRGDIEIRGDRPKNWSVVREPHVVCPGCHARAVIPEGRKDAKCSECGRTYGIDWKDVG*
Ga0137411_132157213300015052Vadose Zone SoilMSRSGFPKADLEIRGGRPDAWSVVREPHVVCPGCHARAIIPEGKKDAKCSECGRTYPIDWKDVG*
Ga0137420_119450633300015054Vadose Zone SoilVVLDVHHVEVRIPKGDLEIRGERPSTWSVVREPHLVCPGCHSRTVIPEGKKDAKCSECGRTYPINWKDAG*
Ga0137420_1406054103300015054Vadose Zone SoilMSSSTCTTWRFGFPKGDLEIRGERPSTWSVVREPHLVCPGCHSRTVIPEGKKDAKCSECGRTYPINWKDAG*
Ga0180089_112871623300015254SoilVLDVHHVEVRVPKGDVEIRNARPDTWSVVREPHVVCPGCHARTVVPEGRKDAKCHECGRTYPIDWKDAG*
Ga0134089_1028894923300015358Grasslands SoilIVEDPKKDYVVVDVHHVEIRVPKGDLEIRGQRPTAWSVVRQPHLVCPGCASRAVIPEGMKDAKCNECGRVYPIDWKDAG*
Ga0134112_1036302013300017656Grasslands SoilYDRVPKGDVEIRGDRPDAWSVVREPHLVCPGCHSRAVIPEGQKSAKCSECGRTYTIDWRDSG
Ga0134074_114317613300017657Grasslands SoilTWYRVVEDPKKDYVVVDVHHVEIRVPKGDLEVRGQRPTAWSVVRQPHLVCPGCASRAVIPEGMKDAKCNECGRVYPIDWKDAG
Ga0184610_115813923300017997Groundwater SedimentMADIGWARSRGNRAEGQGLRRGGWYRVVEDPAKDYVVLDVHHVEIRIPRTDLEISKERPKEWSVVREPHLVCPGCHARAVLPEGRKDAKCAECGR
Ga0184634_1005030313300018031Groundwater SedimentIRIPRDDLEIGTERPKAWSVVREPHLVCPGCHARAVIPNGVREAKCAECGRSYPIDWKDA
Ga0184623_1017181123300018056Groundwater SedimentHVEVRVLRADLEIRKDPPKTWSVVREPHLVCPGCHARDVVAEGAKDAKCPECARSYPIDWKDAG
Ga0184639_1021946423300018082Groundwater SedimentMADIGWARSRGNRAEGQGLRRGGWYRVVEDPAKDYVVLDVHHVEIRIPRTDLEISKERPKEWSVVREPHLVCPGCHARAVLPEGRKDAKCAECGRSYPIDWKDAG
Ga0066662_1001825713300018468Grasslands SoilVGQGIRRGVWEGVVETPPKEYVVLDVHHVEVRIAKGELEIRNERPNGWSVVREPHLVCPGCHSRTVVPEGKKEAKCHECGRTYPIDWKDAS
Ga0187893_1030704713300019487Microbial Mat On RocksPWVVIDVHHVEVRVPREDLEIQNGPPKHWSVVREPHLVCPGCHARYVTAEGPRDAKCPECGRTYPVDWKDQA
Ga0193723_1000268193300019879SoilEIRSERPSAWSVVREPHLVCPGCHARTVLPEGRKDGKCHECGRSYAIDWKDSG
Ga0193713_110230213300019882SoilGAWYRVVEDEKKDYVVLDVHHVEVRMERGDLEVRTDPPKAWSVVREPHLVCPGCHARYVVAEGAKDARCPECSRNYPIDWKDPG
Ga0193739_1000060233300020003SoilMERGDLEIRKDPPKVWSVVREPHLVCPGCHARYVVAEGAKDAKCPECARTYPIDWKDAG
Ga0137417_143284133300024330Vadose Zone SoilVLDVHHVEIRIPKGDVEIRSERPNGWSVVREPHLVCPGCHSRTVIAEGKKDAKCSECGRTYPIDWKDAG
Ga0207684_1051950833300025910Corn, Switchgrass And Miscanthus RhizosphereKDYVVLDVHHVEVRIPKGDVEIRNDRPNAWSVVREPHLVCPGCHARMVIPEGRKEAKCHECSRSYAIDWKDAG
Ga0207689_1081212223300025942Miscanthus RhizosphereENPQKDYIVLDVHHVEIRVPKTDLEIRDQTPTAWSVVREPHLVCPGCATRAVVPEGMKDAKCNECGRVYPINWKDSA
Ga0209438_103440313300026285Grasslands SoilYRVVEDEKKDYVILDVHHVELRMERGDLEIRTDPPKAWSVVREPHLVCPGCHARYVVAEGAKDAKCPECSRSYAIDWKDAG
Ga0209438_112289713300026285Grasslands SoilEIRIPKGDVEIRSERPNGWSVVREPHLVCPGCHSRTVIAEGKKDAKCSECGRTYPIDWKDAG
Ga0209236_103765233300026298Grasslands SoilPPKDFVVLDVHHVEIRISKGDLEIRIERPNAWSVVREPHLVCPGCHTRTVVPEGRKDAKCHECGRGYPIDWKDTG
Ga0209761_1001436133300026313Grasslands SoilWYRVVENPPKDFVVLDVHHVEIRISKGDLEIRIERPNAWSVVREPHLVCPGCHTRTVVPEGRKDAKCHECGRGYPIDWKDTG
Ga0209761_109843413300026313Grasslands SoilGAWYRVVENPPKDYVVLDVHHVEIRIPKGDLEIRDQRPNAWSVVREPHLVCPGCHARTVIPEGKREAKCHECGRSYAIDWKDSG
Ga0209378_100926913300026528SoilVVETPPKEYVVLDVHHVEVRIPKGDLEIRNERPNGWSVVREPHLVCPGCHSRTVVPEGKKEAKCHECGRTYPIDWKDAS
Ga0209056_1021178113300026538SoilVRIPKGDLEIRNDRPNAWSVVREPHLVCPGCHARAVIPEGQKNAKCSECGRSYLIDWKDA
Ga0209805_129206323300026542SoilGAWYRVVENPPKEYVVLDVHHVEIRIPKGDLEIRDQRPSSWSVVREPHLVCPGCHARTVIPEGRKDAKCAECSRSYPIDWRDTA
Ga0179587_1026463113300026557Vadose Zone SoilRIPKGDVEIRSERPNGWSVVREPHLVCPGCHSRTVIAEGKKDAKCSECGRTYPIDWKDAG
Ga0209388_106460713300027655Vadose Zone SoilVLDVHHVEIRIPKGDLEIRDHRPNAWSVVREPHLVCPGCHSRTVIAEGKKDAKCSECGRTYPIDWKDAG
Ga0209464_1019592913300027778Wetland SedimentHVEIRIPRADLEIRSESPKTWSVVREPHLVCPGCHARLVIPEGKKDAKCPECGRTYPIDWKDAG
Ga0209283_1097133713300027875Vadose Zone SoilIPKGDLEIRGDRPNAWSVVREPHLVCPACHARTIIPEGRKDAKCGECGKTYPINWKDAG
Ga0209486_1015763533300027886Agricultural SoilDIEIRSESPKIWSVVREPHLVCPGCHARAVIPEGKKDLRCPECGRTYPIDWKDAG
Ga0209382_1201653113300027909Populus RhizosphereEDLEIRGKPPTSWSVVRQPHLVCPGCCTRAVIPEGMKDAKCNECGRVYPIDWKDSA
Ga0209382_1229258123300027909Populus RhizosphereLEIRKDPPKAWSVVREPHLVCPGCHARYVVAEGAKDAKCPECARTYPIDWKDAG
Ga0307308_1011554613300028884SoilKKDYVVLDVHHVEVRMSRGDLEIRKDPPKTWSVVREPHLVCPGCHARYVVAEGAKDAKCPECSRTYAIDWKDAG
Ga0308187_1000921113300031114SoilEIRIPKGDVEIRNERPNAWSVVREPHVVCPGCHARAVIPEGRKDAKCHECGRSYAIDWKDSG
Ga0314780_165002_258_4943300034659SoilVENPQKDYVVLDVHHVEIRVPKTDLEIRDQSPTTWSVVREPHLVCPGCATRAVVPEGMKDAKCNECGRVYPINWKDSA

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.