Metagenome Family F069935

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069935
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	87 residues
Representative Sequence	MTRTMTTVLALGSLMWLSAAATAQQAPMMSDCDKWIAKINGEAGVRVDEAGHNARMKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKQ
Number of Associated Samples	91
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.17 %
% of genes near scaffold ends (potentially truncated)	29.27 %
% of genes from short scaffolds (< 2000 bps)	72.36 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (19.512 % of family members)
Environment Ontology (ENVO)	Unclassified (35.772 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.911 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 43.10% β-sheet: 0.00% Coil/Unstructured: 56.90%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF00296	Bac_luciferase	19.51
PF14343	PrcB_C	7.32
PF02515	CoA_transf_3	5.69
PF13378	MR_MLE_C	4.88
PF02746	MR_MLE_N	4.07
PF00082	Peptidase_S8	2.44
PF00528	BPD_transp_1	2.44
PF00072	Response_reg	1.63
PF07690	MFS_1	0.81
PF00196	GerE	0.81
PF00335	Tetraspanin	0.81
PF02371	Transposase_20	0.81
PF06745	ATPase	0.81
PF17167	Glyco_hydro_36	0.81
PF04932	Wzy_C	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	19.51
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	8.13
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	5.69
COG3307	O-antigen ligase	Cell wall/membrane/envelope biogenesis [M]	0.81
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	73.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.25 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.81 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	73.17 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.81 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	73.17 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	73.17 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	73.17 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100608532	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	826	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100608583	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	885	Open in IMG/M
3300000550\|F24TB_11164383	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1137	Open in IMG/M
3300000956\|JGI10216J12902_117300178	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	904	Open in IMG/M
3300002912\|JGI25386J43895_10144065	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	593	Open in IMG/M
3300004267\|Ga0066396_10022994	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	856	Open in IMG/M
3300004267\|Ga0066396_10033708	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	758	Open in IMG/M
3300004268\|Ga0066398_10112438	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	645	Open in IMG/M
3300004268\|Ga0066398_10155896	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	576	Open in IMG/M
3300004281\|Ga0066397_10098900	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	609	Open in IMG/M
3300004633\|Ga0066395_10281348	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	903	Open in IMG/M
3300004633\|Ga0066395_10469858	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	720	Open in IMG/M
3300005167\|Ga0066672_10120385	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1622	Open in IMG/M
3300005171\|Ga0066677_10438829	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	747	Open in IMG/M
3300005174\|Ga0066680_10031925	All Organisms → cellular organisms → Bacteria	2986	Open in IMG/M
3300005174\|Ga0066680_10403244	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	868	Open in IMG/M
3300005178\|Ga0066688_10055770	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2300	Open in IMG/M
3300005180\|Ga0066685_10280159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1152	Open in IMG/M
3300005181\|Ga0066678_10984881	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	547	Open in IMG/M
3300005294\|Ga0065705_10889614	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	579	Open in IMG/M
3300005295\|Ga0065707_11089689	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	518	Open in IMG/M
3300005332\|Ga0066388_106091695	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	609	Open in IMG/M
3300005468\|Ga0070707_100735926	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	949	Open in IMG/M
3300005471\|Ga0070698_100354285	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1399	Open in IMG/M
3300005471\|Ga0070698_101820928	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	561	Open in IMG/M
3300005540\|Ga0066697_10048480	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2403	Open in IMG/M
3300005556\|Ga0066707_10088016	All Organisms → cellular organisms → Bacteria	1887	Open in IMG/M
3300005558\|Ga0066698_10883248	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	573	Open in IMG/M
3300005569\|Ga0066705_10856862	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	540	Open in IMG/M
3300005713\|Ga0066905_101556255	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	604	Open in IMG/M
3300005713\|Ga0066905_102048685	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	532	Open in IMG/M
3300005764\|Ga0066903_100026030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6444	Open in IMG/M
3300005764\|Ga0066903_103562686	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	839	Open in IMG/M
3300005983\|Ga0081540_1024649	All Organisms → cellular organisms → Bacteria	3485	Open in IMG/M
3300006032\|Ga0066696_10830230	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	589	Open in IMG/M
3300006049\|Ga0075417_10000183	All Organisms → cellular organisms → Bacteria → Proteobacteria	12373	Open in IMG/M
3300006049\|Ga0075417_10084339	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300006794\|Ga0066658_10059895	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1668	Open in IMG/M
3300006800\|Ga0066660_10038351	All Organisms → cellular organisms → Bacteria	3021	Open in IMG/M
3300006844\|Ga0075428_100138005	All Organisms → cellular organisms → Bacteria	2651	Open in IMG/M
3300006844\|Ga0075428_100689437	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1088	Open in IMG/M
3300006845\|Ga0075421_100710717	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1167	Open in IMG/M
3300006854\|Ga0075425_100011237	All Organisms → cellular organisms → Bacteria	9559	Open in IMG/M
3300006854\|Ga0075425_100440362	All Organisms → cellular organisms → Bacteria	1501	Open in IMG/M
3300006871\|Ga0075434_102345660	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	536	Open in IMG/M
3300006880\|Ga0075429_100030672	All Organisms → cellular organisms → Bacteria	4670	Open in IMG/M
3300006903\|Ga0075426_11089102	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	605	Open in IMG/M
3300006904\|Ga0075424_102311463	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	565	Open in IMG/M
3300007076\|Ga0075435_100105330	All Organisms → cellular organisms → Bacteria	2341	Open in IMG/M
3300007255\|Ga0099791_10036846	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2162	Open in IMG/M
3300009012\|Ga0066710_101953263	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300009094\|Ga0111539_11530092	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	774	Open in IMG/M
3300009100\|Ga0075418_12427829	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	572	Open in IMG/M
3300009100\|Ga0075418_13032091	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	512	Open in IMG/M
3300009137\|Ga0066709_100489223	All Organisms → cellular organisms → Bacteria	1730	Open in IMG/M
3300009147\|Ga0114129_10000419	All Organisms → cellular organisms → Bacteria → Proteobacteria	50203	Open in IMG/M
3300009147\|Ga0114129_10030770	All Organisms → cellular organisms → Bacteria	7591	Open in IMG/M
3300009147\|Ga0114129_12964881	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	559	Open in IMG/M
3300009156\|Ga0111538_10959210	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1082	Open in IMG/M
3300009792\|Ga0126374_10291863	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1088	Open in IMG/M
3300009792\|Ga0126374_10730922	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	748	Open in IMG/M
3300010046\|Ga0126384_10070376	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2484	Open in IMG/M
3300010358\|Ga0126370_10802350	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	839	Open in IMG/M
3300010358\|Ga0126370_12274613	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	536	Open in IMG/M
3300010359\|Ga0126376_10022124	All Organisms → cellular organisms → Bacteria	4175	Open in IMG/M
3300010359\|Ga0126376_10348351	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1312	Open in IMG/M
3300010360\|Ga0126372_10010605	All Organisms → cellular organisms → Bacteria	4897	Open in IMG/M
3300010360\|Ga0126372_10951037	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	866	Open in IMG/M
3300010360\|Ga0126372_12118120	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	610	Open in IMG/M
3300010360\|Ga0126372_13084571	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M
3300010361\|Ga0126378_10615634	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1200	Open in IMG/M
3300010362\|Ga0126377_10416902	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1357	Open in IMG/M
3300010362\|Ga0126377_11457478	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	758	Open in IMG/M
3300010362\|Ga0126377_11875476	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	675	Open in IMG/M
3300010366\|Ga0126379_13738616	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	510	Open in IMG/M
3300010376\|Ga0126381_101935165	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	850	Open in IMG/M
3300010398\|Ga0126383_10110264	All Organisms → cellular organisms → Bacteria → Proteobacteria	2481	Open in IMG/M
3300010398\|Ga0126383_11138035	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	870	Open in IMG/M
3300010398\|Ga0126383_12080458	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	655	Open in IMG/M
3300012202\|Ga0137363_10529009	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	992	Open in IMG/M
3300012205\|Ga0137362_10707138	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	866	Open in IMG/M
3300012211\|Ga0137377_11361192	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	639	Open in IMG/M
3300012361\|Ga0137360_10182569	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1687	Open in IMG/M
3300012361\|Ga0137360_11507469	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	577	Open in IMG/M
3300012362\|Ga0137361_10087554	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2678	Open in IMG/M
3300012362\|Ga0137361_11308312	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	649	Open in IMG/M
3300012582\|Ga0137358_10021133	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4194	Open in IMG/M
3300012923\|Ga0137359_10481334	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1096	Open in IMG/M
3300012923\|Ga0137359_11715709	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	515	Open in IMG/M
3300012929\|Ga0137404_10023939	All Organisms → cellular organisms → Bacteria	4445	Open in IMG/M
3300012930\|Ga0137407_10001618	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	14715	Open in IMG/M
3300012948\|Ga0126375_10036940	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2485	Open in IMG/M
3300012948\|Ga0126375_10754201	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	765	Open in IMG/M
3300012971\|Ga0126369_10031233	All Organisms → cellular organisms → Bacteria	4385	Open in IMG/M
3300018468\|Ga0066662_10026693	All Organisms → cellular organisms → Bacteria	3353	Open in IMG/M
3300020170\|Ga0179594_10231739	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	695	Open in IMG/M
3300021560\|Ga0126371_11162475	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	909	Open in IMG/M
3300025910\|Ga0207684_10154107	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1977	Open in IMG/M
3300025910\|Ga0207684_10175934	All Organisms → cellular organisms → Bacteria	1845	Open in IMG/M
3300026285\|Ga0209438_1160883	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	590	Open in IMG/M
3300026295\|Ga0209234_1199090	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300026309\|Ga0209055_1000447	All Organisms → cellular organisms → Bacteria	29104	Open in IMG/M
3300026324\|Ga0209470_1068569	All Organisms → cellular organisms → Bacteria	1654	Open in IMG/M
3300026328\|Ga0209802_1047842	All Organisms → cellular organisms → Bacteria	2134	Open in IMG/M
3300026333\|Ga0209158_1041425	All Organisms → cellular organisms → Bacteria	1932	Open in IMG/M
3300026335\|Ga0209804_1002068	All Organisms → cellular organisms → Bacteria	12430	Open in IMG/M
3300026342\|Ga0209057_1045867	All Organisms → cellular organisms → Bacteria	2110	Open in IMG/M
3300026530\|Ga0209807_1307290	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	537	Open in IMG/M
3300026552\|Ga0209577_10519744	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	779	Open in IMG/M
3300027527\|Ga0209684_1038188	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	735	Open in IMG/M
3300027646\|Ga0209466_1005524	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2660	Open in IMG/M
3300027873\|Ga0209814_10000675	All Organisms → cellular organisms → Bacteria	11550	Open in IMG/M
3300027873\|Ga0209814_10022604	All Organisms → cellular organisms → Bacteria	2560	Open in IMG/M
3300027909\|Ga0209382_10970472	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	888	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1054419	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	845	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10100603	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	776	Open in IMG/M
3300031547\|Ga0310887_10422129	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	789	Open in IMG/M
3300031720\|Ga0307469_10033065	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3032	Open in IMG/M
3300031720\|Ga0307469_10624426	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	967	Open in IMG/M
3300031740\|Ga0307468_100037593	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2391	Open in IMG/M
3300031820\|Ga0307473_10317105	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	988	Open in IMG/M
3300032180\|Ga0307471_100677167	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1195	Open in IMG/M
3300032180\|Ga0307471_103651648	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	544	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.30%
Host-Associated	Host-Associated	18.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.30%
Plants	Host-Associated → Plants	18.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.89%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.89%
Loam	Environmental → Terrestrial → Soil → Loam	17.07%
Sand	Environmental → Terrestrial → Soil → Sand	1.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	24.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.06%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.63%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.63%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	19.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	19.51%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	17.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.06%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.63%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.63%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.81%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1006085322	3300000364	Soil	MTRTMTTVLTLVSLVCLSAAATAQPAPMTSDCDKWIARINGEAGVRVDEAGHNARMKVDEIAKMCKEGRTADAQKAATETMANLGIKP*
INPhiseqgaiiFebDRAFT_1006085831	3300000364	Soil	MTRMTTAVLALGSLVWLSAAAMAQQAPMTGDCDXWIARINSEAGXRVDEAGWNARQNVDEIYKLCKDGKMAEAQKIATDTMTMLGITL*
F24TB_111643833	3300000550	Soil	MTRTMTTVLTLVSLVCLSAVATAQPAPMTSDCDKWIARINGEAGVRVDEAGHNARMKVDEIAKMCKDGRTADAEKIAKDTMATLGIKP*
JGI10216J12902_1173001782	3300000956	Soil	MTRTMTTVLTLVSLVCLSAVATAQPAPMTSDCDKWIARINGEAGVRVDEAGHNARMKVDEIAKMCKEGRMAEAQKAATETMANLGIKP*
JGI25386J43895_101440652	3300002912	Grasslands Soil	MTRTMTTVLALGSLMWLTAAATAQQAAMMSDCDKWIAKINGEAGVRVDEAGHNARLKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKP*
Ga0066396_100229942	3300004267	Tropical Forest Soil	MTRMTTAGLALVSLVWFSAAAMAQQAPKQSDCDQWIAQINAEAGIRVDEAAWRARQNADEIYKMCKDGRMAEAQRIATDTMALLGIKL*
Ga0066396_100337082	3300004267	Tropical Forest Soil	MTRMTTAGLALVSLVWLSAVAMAQQAPMQSDCDKWIARINAEAGIRVDEAGWRARQNVDDIYKMCKDGKTTEAQKMAADTMAMLGIKL*
Ga0066398_101124382	3300004268	Tropical Forest Soil	TAVLALVSLVWLSAGAMAQQAPMAGDCDKWIERINAEAGVRVDEAGWKARQNVDDIARMCKEGKTSEAQKIATDTMAMLGIRL*
Ga0066398_101558961	3300004268	Tropical Forest Soil	MTRMTTAGLALVSLVWLSAVAMAQQAPMQSNCDKWIARINAEAGIRVDEAGWRARQNVDDIYKMCKDGKTAEAQKMAADTMAMLGIKL*
Ga0066397_100989001	3300004281	Tropical Forest Soil	MTRLTTAVLALVSLVWLSAGAIAQQAPMASDCNKWIDRINAEAGIRVDEAGWKARQNVDDIARMCNEGKTTEAQKIATDTMAMLGIKL*
Ga0066395_102813482	3300004633	Tropical Forest Soil	MTRMTTAGLALVSLVWLSAVAMAQQAPIQSDCDKWIAQINAEAGPRADEAAWRARQKVDDIYKMCKDGKMTEAQKMAADTMAMLGIKL*
Ga0066395_104698581	3300004633	Tropical Forest Soil	MTRLTTAVVAFGSLMWLSAGAIAQQAPMASDCAKWIERINAEAGVRVDEAGWKARQNVDDIARMCNEGKTTEAQKIATDTMAMLGIKL*
Ga0066672_101203852	3300005167	Soil	MTRTMTTVLALGSLMWLSAAATAQQAPMMSDCDKWIATINGEVGVRVDEAGHNARMKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKQ*
Ga0066677_104388292	3300005171	Soil	MTRTMTTVLALGSLMWLSAAATAQQAPMMSDCDKWIATINGEAGVRVDEAGHNARMKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKQ*
Ga0066680_100319251	3300005174	Soil	MTRTMTTVLALGSLMWLSAAATAQQAPMMSDCDKWIATINGEVGVRVDEAGHNARMKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKP*
Ga0066680_104032442	3300005174	Soil	MTRTMTTVLALGSLMWLSAAATAQQAPTMSDCDKWIATINGEAGVRVDEAGYNARMKVDEIAKMCKEGKTAEAEKIAMDTMANLGIK
Ga0066688_100557702	3300005178	Soil	MTRTMTTVLALGSLMWLTAAATAQQAPMMSDCDKWIAKINGEAGVRVDEAGHNARMKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKP*
Ga0066685_102801592	3300005180	Soil	MTRTMTTVLALGSLMWLSAAATAQQAPMMSDCDKWIATINGEAGVRVDEAGHNARMKVDEIAKMCKEGKTAEAEKIAMDTMAESRHQTVRTASTVR*
Ga0066678_109848812	3300005181	Soil	MTRTMTTVLALGSLMWLTAAATAQQAPMMSDCDKWIAKINGEAGVRVDEAGHNARLKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKP*
Ga0065705_108896141	3300005294	Switchgrass Rhizosphere	MTRTMTTVLTLVSLVCLSAVATAQPAPMTSDCDKWIARINGEAGVRVDEAGHNARMKVDEIAKMCKEGRMADAQKAATETMANLGIKP*
Ga0065707_110896891	3300005295	Switchgrass Rhizosphere	MTRTMTTVLTLVSLVCLSAVATAQPAPMTSDCDKWIARINGEAGVRVDEAGHNARMKVDEIAKMCKEGRTADAQKAATETMANLGIKP*
Ga0066388_1060916951	3300005332	Tropical Forest Soil	MTRTMTAVLSLGSLLWLSTAATAQQPPMPSDCDSWIAKINNEAGIRVDEAGYNARLKVDEIAKMCSEGKMDEARKAATETMANLGIKQ*
Ga0070707_1007359262	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTRTMTTVLALGSLMWLTAAATAQQAPMMSDCDKWIARINGEAGVRVDEAGHNARMKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKP*
Ga0070698_1003542852	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MWLSAAATAQQAPMMSDCDKWIAKLNSEAGVRVDEAGHNGRMKVDAIAKMCKEGKTTEAEKIAMDTMANLGIKR*
Ga0070698_1018209282	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTRTMTTVLALGSLMWLTAAATAQQAPMMSDCDKWIARINGEAGVRVDEAGHNARLKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKP*
Ga0066697_100484803	3300005540	Soil	MTRTMTTVLALGSLMWLTAAATAQQAPMMSDCDKWIAKINGEAGVRVDEAGHNARMKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKQ*
Ga0066707_100880161	3300005556	Soil	MTRTMTTVLALGSLMWLSAAATAQQAPMMSDCDKWIATINGEAGVRVDEAGHNARLKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKP*
Ga0066698_108832482	3300005558	Soil	MTRTMTTVLALGSLMWLTAAATAQQAPMMSDCDKWIATINGEAGVRVDEAGHNARMKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKP*
Ga0066705_108568621	3300005569	Soil	AGELRVVSGYLTQRGGEGMTRTMTTVLALGSLMWLSAAATAQQAPMMSDCDKWIATINGEVGVRVDEAGHNARMKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKQ*
Ga0066905_1015562551	3300005713	Tropical Forest Soil	MTRLTTAIVAFGSLMWLSAGAIAQQAPMASDCAKWIERINAEAGVRVDEAGWKARQNVDDIARMCNEGKTTEAQKIATDTMAMLGIKL*
Ga0066905_1020486851	3300005713	Tropical Forest Soil	TLTRAALLAVASLMWLAAAATAQQTPMASDCDKWISKINSEVGVRVDEAGYNARVKADEIARMCKEGKMDEAQKTATETMMNLGIKQ*
Ga0066903_1000260306	3300005764	Tropical Forest Soil	MTRMTTAGLALVSLVWFSAAAMAQQAPKQSDCDRWIAQINAEAGIRVDEAAWRARQNADDIYKMCKDGRMAEAQRIATDTMALLGIKL*
Ga0066903_1035626862	3300005764	Tropical Forest Soil	DMTRMTTALLALVSLVWFSAAATAQQAPIQSDCDKWIARINAEAGTRVDEAAWKARQNVDDIYKMCKDGRTADAQRIATDTMAMLGIKL*
Ga0081540_10246491	3300005983	Tabebuia Heterophylla Rhizosphere	MTRTMTAVVSLGSLLWLSTAATAQQPPMPSDCNRWIATIDNDAGVRVDEAGYNARLTVEEIAKMCSEGKMEEARKAATETIANLGIKQ*
Ga0066696_108302301	3300006032	Soil	GEGMTRTMTTVLALGSLMWLTAAATAQQAPTMSDCDKWIATINGEAGVRVDEAGHNARMKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKQ*
Ga0075417_100001833	3300006049	Populus Rhizosphere	MTRTMTAVLSLGSLLWLSTAATAQQPPMPSDCDSWIATINNEAGVRVDEAGYNARLKVEEIAKMCSEGKMDEARKAATETMANLGIKQ*
Ga0075417_100843393	3300006049	Populus Rhizosphere	MTSTRAALLAVVSLMWLAAAATAQQTPMASGCDKWIAKINSEVGVRVDEAGYNARVKADEIARMCKEGKMDEAQKTATETMANLGIKQ*
Ga0066658_100598952	3300006794	Soil	MTRTMTTVLALGSLMWLSAAATAQQAPMMSDCDKWIATINGEAGVRVDEAGHNARMKVDEIAKMCKEGKTAEAEKIAMDTIANVGIKQ*
Ga0066660_100383511	3300006800	Soil	MTRTMTTVLALGSLMWLTAAATAQQAPTMSDCDKWIATINGEAGVRVDEAGHNARLKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKP*
Ga0075428_1001380051	3300006844	Populus Rhizosphere	MTSTRAALLAVVSLMWLAAAATAQQTPMASDCDKWIAKINSEVGVRVDEAGYNARVKADEIARMCKEGKMDEAQKTATETMANLGIKQ*
Ga0075428_1006894373	3300006844	Populus Rhizosphere	MTSTRAAVPAVVSLMWLAAVATAQQTPMASDCNKWIDRINSEVGVRVDEAGYNARVKADEIARMCKEGKMDEAQKVATETMTNLGIKQ*
Ga0075421_1007107172	3300006845	Populus Rhizosphere	MTRTMTTVLTLVSLVCLSAVATAQPAPMTSDCDKWIARINGEAGVRVDEVGHNARMKVDEIAKMCKEGRMAEAQKAATETMANLGIKP*
Ga0075425_1000112375	3300006854	Populus Rhizosphere	MTRTMTTVLALGSLMWLTAAATAQQAPMMSDCDKWIAKINGEAGVRVDEAGHNARMRVDEIAKMCKEGKTAEAEKIAMDTMANLGIKR*
Ga0075425_1004403623	3300006854	Populus Rhizosphere	MTRMTTAVLALGSLVWLSAAAMAQQAPMTGDCDKWIARINSEAGIRVDEAGWNARQNVDEIYKLCKDGKMAEAQKIATDTMTMLGITL*
Ga0075434_1023456601	3300006871	Populus Rhizosphere	TQRGGEGMTRTMTTVLALGSLMWLTAAATAQQAPMMSDCDKWIAKINGEAGVRVDEAGHNARLKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKP*
Ga0075429_1000306725	3300006880	Populus Rhizosphere	MTSTRAALLAVVSLMWLAAAATAQQTLMASDCDKWIAKINSEVGVRVDEAGYNARVKADEIARMCKEGKMDEAQKTATETMANLGIKQ*
Ga0075426_110891023	3300006903	Populus Rhizosphere	STAATAQQPPMPSDCDSWIATINNEAGVRVDEAGYNARLKVEEIAKMCSEGKMDEARKAATETMANLGIKQ*
Ga0075424_1023114632	3300006904	Populus Rhizosphere	AVLSLGSLLWLSTAATAQQAPMMSECDSWIAKINNEAGIRVDDAGYNARLKVEEIAKLCKEGKMDEAKKAATETMVNLGIKM*
Ga0075435_1001053301	3300007076	Populus Rhizosphere	MTRTMTAVLSLGSLLWLSTAATAQQPPMPSDCDSWIATINNEAGVRVDEAGYNARLKVEEIAKMCSEGKMDEARKAATET
Ga0099791_100368461	3300007255	Vadose Zone Soil	MKRTTTAVLALGSLVWLSATAMAQQAPMTSDCDKWVARINGEAGIRVDEAGWMARQNVDEIDKLCKGGKMAEAQKIATDTMTMLGIKL*
Ga0066710_1019532632	3300009012	Grasslands Soil	MTRTMTTVLALGSLMWLSAAATAQQAPMMSDCDKWIATINGEAGVRVDEAGHNARMKVDEIAKMCKEGKTAEAEKIAMDTMA
Ga0111539_115300922	3300009094	Populus Rhizosphere	MWLAAAATAQQTPMASDCNKWIAKINSEVGVRVDEAGYNARVKADEIARMCKEGKMDEAQKTATETMANLGIKQQAA
Ga0075418_124278291	3300009100	Populus Rhizosphere	MTTVLTLVSLVCLSAVATAQPAPMTSDCDKWIARINGEAGVRVDEVGHNARMKVDEIAKMCKEGRMAEAQKA
Ga0075418_130320911	3300009100	Populus Rhizosphere	MWLAAAATAQQTLMASDCDKWIAKINSEVGVRVDEAGYNARVKADEIARMCKEGKMDEAQKTATETMANLGIKQ*
Ga0066709_1004892232	3300009137	Grasslands Soil	MTRTMTTVLALGSLMWLSAAATAQQAPMMSDCDKWIAKINGEAGVRVDEAGHNARMKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKQ*
Ga0114129_1000041920	3300009147	Populus Rhizosphere	MTAVLSLGSLLWLSTAATAQQPPMPSDCDSWIATINNEAGVRVDEAGYNARLKVEEIAKMCSEGKMDEARKAATETMANLGIKQ*
Ga0114129_100307705	3300009147	Populus Rhizosphere	MWLAAAATAQQTPMASDCDKWIAKINSEVGVRVDEAGYNARVKADEIARMCKEGKMDEAQKTATETMANLGIKQ*
Ga0114129_129648812	3300009147	Populus Rhizosphere	MWLAAVATAQQTPMASDCNKWIDRINSEVGVRVDEAGYNARVKADEIARMCKEGKMDEAQKTATETMANLG
Ga0111538_109592102	3300009156	Populus Rhizosphere	MWLAAAATAQQTPMASDCAKWIDRINSEVGVRVDEAGYNARVKADEIARMCKEGKMDEAQKVVTETMMNLGIKQ*
Ga0126374_102918632	3300009792	Tropical Forest Soil	MTTAGLALVSLVWFSAAAMAQQAPKQSDCDQWIAQINAEAGIRVDEAAWRARQNADDIYKMCKDGRMAEAQRIATDTMALLGIKL*
Ga0126374_107309222	3300009792	Tropical Forest Soil	MPIDLQKGGGEDMTRLTTAVVAFGSLMWLSAGAIAQQAPMASDCAKWIERINAEAGVRVDEAGWKARQNVDDIARMCNEGKTTEAQKIATDTMAMLGIKL*
Ga0126384_100703762	3300010046	Tropical Forest Soil	MTTAGLALVSLVWLSAVAMAQQAPMQSNCDKWIARINAEAGIRVDEAGWRARQNVDDIYKMCKDGKTAEAQKMAADTMAMLGIKL*
Ga0126370_108023502	3300010358	Tropical Forest Soil	MTRLTTAVVAFGSLMWLSAGANAQQAPMASDCAKWIERINAEAGVRVDEAGWKARQNVDDIARMCNEGKTTEAQKIATDTMAMLGIKL*
Ga0126370_122746131	3300010358	Tropical Forest Soil	MTTALLALVSLVWFSAAATAQQAPMQSDCDKWIARINAEAGTRVDEAAWKARQNVDDIYKMCKDGRTADAQRIATDTMAMLGIKL*
Ga0126376_100221243	3300010359	Tropical Forest Soil	MTTAGLALVSLVWLSAVAMAQQAPMQSDCDKWIARINAEAGIRVDEAGWRARQNVDDIYKMCKDGKTTEAQKMAADTMAMLGIKL*
Ga0126376_103483512	3300010359	Tropical Forest Soil	MTTAGLALVSLVWFSAAAMAQQAPKQSDCDQWIAQINAEAGIRVDEAAWRARQNADEIYKMCKDGRMAEAQRIATDTMALLGIKL*
Ga0126372_100106055	3300010360	Tropical Forest Soil	MTTAGLALVSLVWFSAAAMAQQAPKQSDCDQWIARINAEAGIRVDEAAWRARQNADDIYKMCKDGRMAEAQRIATDTMALLGIKL*
Ga0126372_109510371	3300010360	Tropical Forest Soil	MTRLTTAVLALVSVVGLSAGAIAQQAPTSDCDRWIERINAEAGVRVDEAGWKARQNIDDIARMCKEGKTAEAQKVATD
Ga0126372_121181202	3300010360	Tropical Forest Soil	GGEDMTRLTTAVLALGSLMWLSAGAIAQQAPMASDCAKWIERINAEAGVRVDEAGWKARQNVDDIARMCNEGKTTEAQKIATDTMAMLGIKL*
Ga0126372_130845712	3300010360	Tropical Forest Soil	LSAVAMAQQAPMQSDCDKWIARINAEAGTRVDEAAWKARQNVDDIYKMCKDGRTADAQRIATDTMAMLGIKL*
Ga0126378_106156343	3300010361	Tropical Forest Soil	MPIDLQKGGGEDMTRLTTAVVAFGSLMWLSAGAIAQQAPMASDCAKWIERINAEAGVRVDEAGWKARQNVDDIARMCNEGKTAEAQKIATDTMAMLGINL*
Ga0126377_104169022	3300010362	Tropical Forest Soil	MTTAGLALVSLLWFSAAAMAQQAPKQSDCDQWIAQINAEAGIRVDEAAWRARQNADDIYKMCKDGRMAEAQRIATDTMALLGIKL*
Ga0126377_114574781	3300010362	Tropical Forest Soil	MPIDLEERGGEDMTRLATAVLALVSLVWLSAGAMAQQAPMAGDCDKWIERINAEAGVRVDEAGWKARQNVDDIARMCKEGKTSE
Ga0126377_118754762	3300010362	Tropical Forest Soil	RVTTAVLTLVSLVWLSAGAIAQQAPMASDCDKWIDRINAEAGVRVDEAGWKARQNVDDIAKMCKEGKTAEAQKIATDTMAMLGIKL*
Ga0126379_137386162	3300010366	Tropical Forest Soil	EDMTRMTTAGLALVSLVWLSAVAMAQQAPIQSDCDKWIAQINAEAGPRADEAAWRARQKVDDIYKMCKDGKMTEAQKMAADTMAMLGIKL*
Ga0126381_1019351651	3300010376	Tropical Forest Soil	MTTAGLALVSLVWFSAAAMAQQAPKQSDCDRWIAQINAEAGIRVDEAAWRARQNADDIYKMCKDGRMAEAQRIATDTMALLGIKL*
Ga0126383_101102641	3300010398	Tropical Forest Soil	MTTAGLAFVSLVWFSAAAMAQQTPKPSDCDQWIARINAEAGVRADEAAWRARQNVDAIYKMCKDGNMTEAQRIATDTMAILGIKL*
Ga0126383_111380351	3300010398	Tropical Forest Soil	MWLSAGAIAQQAPMASDCAKWIERINAEAGVRVDEAGWKARQNVDDIARMCNEGKTTEAQKIATDTMAMLGIKL*
Ga0126383_120804581	3300010398	Tropical Forest Soil	MTTAGLALVSLLWFSAAAMAQQAPKQSDCDQWIARINAEAGIRVDEAAWRARQNADDIYKMCKDGRMAEAQRIATDTMALLGIKLE
Ga0137363_105290092	3300012202	Vadose Zone Soil	MPIDLTQRGGEDMKRTTTAVLALGSLVWLSATAMAQQAPMTSDCDKWVGRINGEAGIRVDEAGWMARQNVDEIDKLCKGGKMAEAQKIATDTMTMLGIKL*
Ga0137362_107071382	3300012205	Vadose Zone Soil	MPIDLTQRGGEDMTRTTTAVLALGSLVWLSATAMAQQAPMTSDCDKWVGRINGEAGIRVDEAGWMARQNVDEIDKLCKGGKMAEAQKIATDTMTMLGIKL*
Ga0137377_113611921	3300012211	Vadose Zone Soil	MTRTMTTVLALGSLMWLSAAATAQQAPMMSDCDKWIATINGEVGVRVDEAGHNARMKVDEIAKMCKEGKTAEAEKI
Ga0137360_101825691	3300012361	Vadose Zone Soil	MTAVLTLGSLLWLSAAATAQQAPMTSDCERWIARINGEAGVRADEAGHNARQKVDEIAKMCKEGKVAEAQKAATETMANLGIKP*
Ga0137360_115074692	3300012361	Vadose Zone Soil	TMTTVLALGSLMWLTAAATAQQAAMMSDCDKWIAKINGEAGVRVDEAGHNARLKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKP*
Ga0137361_100875545	3300012362	Vadose Zone Soil	MTAVLTLGSLLWLSAAATAQQAPMTSDCERWIARINGEAGVRADEAGHNARQKVDESAKMCKEGKVAEAQKAATETMANLGIKP*
Ga0137361_113083122	3300012362	Vadose Zone Soil	MWLTAAATAQQAPMMSDCDKWIARINGEAGVRVDEAGHNARLKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKP*
Ga0137358_100211333	3300012582	Vadose Zone Soil	MKRTTTAVLALGSLVWLSATAMAEQAPMTSDCDKWVARINGEAGIRVDEAGWMARQNVDEIDKLCKGGKMAEAQRIATDTMTMLGIKL*
Ga0137359_104813343	3300012923	Vadose Zone Soil	MTAVLTLGSLLWLSAAATAQQAPMTSDCERWIARINGEAGVRVDEAGHNARQKVDEIAKMCKEGKVAEAQKAATETMANLGIKP*
Ga0137359_117157091	3300012923	Vadose Zone Soil	TVLALGSLMWLTAAATAQQAPMMSDCDKWIAKINGEAGVRVDEAGHNARLKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKP*
Ga0137404_100239395	3300012929	Vadose Zone Soil	MTAVLTLGSLLWLSAAATAQQAPMTSDCERWIARINGEAGVRVDEAGHNARQKVDEIAKMCKEGKMAEAQKAATETMANLGIKP*
Ga0137407_1000161812	3300012930	Vadose Zone Soil	MTAVLILGSLLWLSAAATAQQAPMTSDCERWIARINGEAGVRVDEAGHNARQKVDEIAKMCKEGKMAEAQKAATETMANLGIKP*
Ga0126375_100369404	3300012948	Tropical Forest Soil	MPIDLQKGGGEDMTRLTTAVVAFGSLMWLSAGAIAQQAPMASDCAKWIERINAEAGVRVDEAGWKARQNVDDIARMCNEGKTAEAQKIATDTMAMLGIKL*
Ga0126375_107542012	3300012948	Tropical Forest Soil	MTRLTTAGLALVSLVWFSAAAMAQQTPKPSDCDQWIARINAEAGVRADEAAWRARQNVDAIYKMCKDGNMTEAQRIATDTMAILGIKL*
Ga0126369_100312336	3300012971	Tropical Forest Soil	MTTAGLALVSLVWLSAVAMAQQAPIQSDCDKWIAQINAEAGPRADEAAWRARQKVDDIYKMCKDGKMTEAQKMAADTMAMLGIKL*
Ga0066662_100266933	3300018468	Grasslands Soil	MTRTMTTVLALGSLMWLTAAATAQQAAMMSDCDKWIAKINGEAGVRVDEAGHNARLKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKP
Ga0179594_102317392	3300020170	Vadose Zone Soil	MTRTMTAVLTLGSLLWLSAAATAQQAPMTSDCERWIARINGEAGVRVDEAGHNARQKVDEIAKMCKEGKMAEAQKAATETMANLGIK
Ga0126371_111624751	3300021560	Tropical Forest Soil	MTRMTTAGLALVSLVWLSAVAMAQQAPIQSDCDKWIAQINAEAGPRADEAAWRARQKVDDIYKMCKDGKMTEAQKMAADTMAMLGIKL
Ga0207684_101541073	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTRTMTTVLALGSLMWLTAAATAQQAPMMSDCDKWIAKINGEAGVRVDEAGHNARLKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKP
Ga0207684_101759343	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	SVRFHGRPRTTVLALGSLMWLSAAATAQQAPMMSDCDKWIAKLNSEAGVRVDEAGHNGRMKVDAIAKMCKEGKTTEAEKIAMDTMANLGIKR
Ga0209438_11608832	3300026285	Grasslands Soil	GASMQIDLTQRGGEDMKRTTTAVLALGSLVWLSATAMAQQAPMTSDCDKWVARINGEAGIRVDEAGWMARQNVDEIDKLCKGGKMAEAQKIATDTMTMLGIKL
Ga0209234_11990902	3300026295	Grasslands Soil	MWLTAAATAQQAPMMSDCDKWIAKINGEAGVRVDEAGHNARLKVDEIAKMCKEGKTAEAEKI
Ga0209055_10004478	3300026309	Soil	MTRTMTTVLALGSLMWLSAAATAQQAPMMSDCDKWIATINGEVGVRVDEAGHNARMKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKQ
Ga0209470_10685691	3300026324	Soil	ALGSLMWLSAAATAQQAPMMSDCDKWIATINGEAGVRVDEAGHNARMKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKQ
Ga0209802_10478421	3300026328	Soil	WLSAAATAQQAPMMSDCDKWIATINLEVGVRVDEAGHNARMKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKQ
Ga0209158_10414253	3300026333	Soil	MTRTMTTVLALGSLMWLTAAATAQQAPMMSDCDKWIATINGEAGVRVDEAGHNARMKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKQ
Ga0209804_10020686	3300026335	Soil	MTRTMTTVLALGSLMWLTAAATAQQAPMMSDCDKWIATINGEVGVRVDEAGHNARMKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKQ
Ga0209057_10458671	3300026342	Soil	MTRTMTTVLALGSLMWLSAAATAQQAPMMSDCDKWIATINGEAGVRVDEAGHNARMKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKQ
Ga0209807_13072901	3300026530	Soil	AGELRVVSGYLTQRGGEGMTRTMTTVLALGSLMWLSAAATAQQAPMMSDCDKWIATINGEVGVRVDEAGHNARMKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKQ
Ga0209577_105197442	3300026552	Soil	MTRTMTTVLALGSLMWLSAAATAQQAPMMSDCDKWIAKINGEAGVRVDEAGHNARLKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKP
Ga0209684_10381881	3300027527	Tropical Forest Soil	MTRMTTAGLALVSLVWFSAAAMAQQAPKQSDCDQWIAQINAEAGIRVDEAAWRARQNADEIYKMCKDGRMAEAQRIATDTMALLGIKL
Ga0209466_10055245	3300027646	Tropical Forest Soil	MTRLTTAVLALVSLVWLSAGAMAQQAPMASDCDKWIDRINAEAGVRVDEAGWKARQNVDDIARMCKEGKTSEAQKIATDTMAMLGIRL
Ga0209814_100006752	3300027873	Populus Rhizosphere	MTRTMTAVLSLGSLLWLSTAATAQQPPMPSDCDSWIATINNEAGVRVDEAGYNARLKVEEIAKMCSEGKMDEARKAATETMANLGIKQ
Ga0209814_100226043	3300027873	Populus Rhizosphere	MTSTRAALLAVVSLMWLAAAATAQQTPMASDCDKWIAKINSEVGVRVDEAGYNARVKADEIARMCKEGKMDEAQKTATETMANLGIKQ
Ga0209382_109704721	3300027909	Populus Rhizosphere	MTRTMTTVLTLVSLVCLSAVATAQPAPMTSDCDKWIARINGEAGVRVDEVGHNARMKVDEIAKMCKEGRMAEAQKAATETMANLGIKP
(restricted) Ga0255311_10544191	3300031150	Sandy Soil	MTRTMTAVLSLVSLVWLSAAATAQQAPMMSDCDQWIAKINAEAGTRVDEAGYNARQKVDEISKLCKEGKMAEAQKTATDTMAMLGIKL
(restricted) Ga0255310_101006031	3300031197	Sandy Soil	MTRTMTAVLSLVSLVWLSAAATAQQAPMMSDCDQWIAKINAEAGTRVDEAGYNARQTVDEISKLCKEGKMAEAQKTATDTMAMLGIKL
Ga0310887_104221292	3300031547	Soil	MTSTRAAVLAVVSLMWLAASATAQQTPMASDCDKWIAKINSEVGVRVDEAGYNARVKADEIARMCKEGKMDEAQKTATETMANLGIKQ
Ga0307469_100330655	3300031720	Hardwood Forest Soil	MTRTTTAVLALVSLVWLSAAAMAQQAPMTGDCDKWVDRINGEAGTRVDEAGWKARQNVDEIYKLCKDGKLAEAQKMATDTMTMLGIKL
Ga0307469_106244263	3300031720	Hardwood Forest Soil	MTRTMTTVLALGSLMWLTAAATAQQAPMMSDCDKWIAKINGEAGVRVDEAGHNARMRVDEIAKMCKEGKTAEAEKI
Ga0307468_1000375932	3300031740	Hardwood Forest Soil	VPITVGRGGTAAPIHLTHGGDEDMTSTRAAVLAVVSLMWLADAATAQQTPMASDCDKWIAKINSEVGVRVDEAGYNARVKADEIARMCKEGKMDEAQKTATETMANLGIKQ
Ga0307473_103171051	3300031820	Hardwood Forest Soil	MTRMTTAVLALGSLVWLSAAAMAQQAPMTGDCDKWIARINSEAGVRVDEAGWNARQNVDEIYKLCKDGKMAEAQKIATDTMTMLGITL
Ga0307471_1006771672	3300032180	Hardwood Forest Soil	MTRTMTTVLVLGSLMWLTAAATAQQTPMMSDCDKWIAKINGEAGVRVDEAGHNARMKVDEIAKMCKEGKTAEAEKIAMDTMANLGIKP
Ga0307471_1036516481	3300032180	Hardwood Forest Soil	MTRTTTAVLALVSLVWLSAAAMAQQAPMTADCDKWVDRINGEAGTRVDEAGWKARQNVDEISRLCKDGKMAEAQKIATDTMTMLGIKL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters