Metagenome / Metatranscriptome Family F069897

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069897
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	97 residues
Representative Sequence	APLEELGRTHSDILGTPEDEEFGVALDRASKEIFGISLTQMTGVSKEEGARRFPSGQRTMLWVKRNLPMSTAQLAERARHYFRDTRA
Number of Associated Samples	101
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.81 %
% of genes near scaffold ends (potentially truncated)	97.56 %
% of genes from short scaffolds (< 2000 bps)	91.06 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.561 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (39.024 % of family members)
Environment Ontology (ENVO)	Unclassified (44.715 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.780 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.91% β-sheet: 0.00% Coil/Unstructured: 46.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF05187	ETF_QO	65.85
PF01012	ETF	4.07
PF00005	ABC_tran	3.25
PF13450	NAD_binding_8	3.25
PF14417	MEDS	2.44
PF00441	Acyl-CoA_dh_1	1.63

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	65.85
COG2440	Ferredoxin-like protein FixX	Energy production and conversion [C]	65.85
COG2025	Electron transfer flavoprotein, alpha subunit FixB	Energy production and conversion [C]	4.07
COG2086	Electron transfer flavoprotein, alpha and beta subunits	Energy production and conversion [C]	4.07
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	1.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.56 %
Unclassified	root	N/A	2.44 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.56 %
Unclassified	root	N/A	2.44 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.56 %
Unclassified	root	N/A	2.44 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	58.54 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	7.32 %
Unclassified	root	N/A	2.44 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	58.54 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.32 %
Unclassified	root	N/A	2.44 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	56.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.32 %
Unclassified	root	N/A	2.44 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	1.63 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	56.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.32 %
Unclassified	root	N/A	2.44 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	1.63 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	56.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.32 %
Unclassified	root	N/A	2.44 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004479\|Ga0062595_100003246	All Organisms → cellular organisms → Bacteria	4244	Open in IMG/M
3300005093\|Ga0062594_103074546	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	522	Open in IMG/M
3300005176\|Ga0066679_10297363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1049	Open in IMG/M
3300005180\|Ga0066685_10190363	All Organisms → cellular organisms → Bacteria	1406	Open in IMG/M
3300005180\|Ga0066685_10480874	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	861	Open in IMG/M
3300005181\|Ga0066678_10273837	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1098	Open in IMG/M
3300005343\|Ga0070687_101045117	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	594	Open in IMG/M
3300005447\|Ga0066689_10220367	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300005468\|Ga0070707_101573183	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	624	Open in IMG/M
3300005468\|Ga0070707_102278232	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	509	Open in IMG/M
3300005536\|Ga0070697_100299847	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300005553\|Ga0066695_10207573	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1230	Open in IMG/M
3300005553\|Ga0066695_10815254	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300005554\|Ga0066661_10129368	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1532	Open in IMG/M
3300005561\|Ga0066699_10652569	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	754	Open in IMG/M
3300005568\|Ga0066703_10086513	All Organisms → cellular organisms → Bacteria	1822	Open in IMG/M
3300005569\|Ga0066705_10703813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300005598\|Ga0066706_10439181	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300005598\|Ga0066706_11198804	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	577	Open in IMG/M
3300005842\|Ga0068858_102083088	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	561	Open in IMG/M
3300006032\|Ga0066696_10869655	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	574	Open in IMG/M
3300006796\|Ga0066665_10991634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300006800\|Ga0066660_10116881	All Organisms → cellular organisms → Bacteria	1920	Open in IMG/M
3300006847\|Ga0075431_101685067	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	591	Open in IMG/M
3300007258\|Ga0099793_10465421	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	626	Open in IMG/M
3300007265\|Ga0099794_10231589	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	950	Open in IMG/M
3300007788\|Ga0099795_10083699	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1225	Open in IMG/M
3300009012\|Ga0066710_100032729	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	6091	Open in IMG/M
3300009012\|Ga0066710_100275853	All Organisms → cellular organisms → Bacteria	2448	Open in IMG/M
3300009012\|Ga0066710_102881040	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300009090\|Ga0099827_10443960	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1112	Open in IMG/M
3300009090\|Ga0099827_11111372	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	686	Open in IMG/M
3300009090\|Ga0099827_11448798	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	598	Open in IMG/M
3300009137\|Ga0066709_101316939	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1058	Open in IMG/M
3300009162\|Ga0075423_10289091	All Organisms → cellular organisms → Bacteria	1718	Open in IMG/M
3300010159\|Ga0099796_10236763	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300010320\|Ga0134109_10174334	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	784	Open in IMG/M
3300010322\|Ga0134084_10353959	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300010325\|Ga0134064_10129277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	856	Open in IMG/M
3300010325\|Ga0134064_10225174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300010329\|Ga0134111_10549921	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300010333\|Ga0134080_10162807	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	951	Open in IMG/M
3300010336\|Ga0134071_10426441	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300010337\|Ga0134062_10344490	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	716	Open in IMG/M
3300010364\|Ga0134066_10251205	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300010400\|Ga0134122_10079284	All Organisms → cellular organisms → Bacteria	2566	Open in IMG/M
3300010403\|Ga0134123_12504867	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	582	Open in IMG/M
3300011269\|Ga0137392_10023326	All Organisms → cellular organisms → Bacteria	4382	Open in IMG/M
3300011271\|Ga0137393_10333489	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1294	Open in IMG/M
3300012096\|Ga0137389_10012429	All Organisms → cellular organisms → Bacteria	5733	Open in IMG/M
3300012189\|Ga0137388_10407844	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1258	Open in IMG/M
3300012189\|Ga0137388_10647791	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	982	Open in IMG/M
3300012199\|Ga0137383_10655979	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	767	Open in IMG/M
3300012200\|Ga0137382_10138118	All Organisms → cellular organisms → Bacteria	1643	Open in IMG/M
3300012201\|Ga0137365_10831311	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	674	Open in IMG/M
3300012203\|Ga0137399_10616483	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300012203\|Ga0137399_10694388	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	856	Open in IMG/M
3300012203\|Ga0137399_10867636	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	760	Open in IMG/M
3300012206\|Ga0137380_10997449	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	716	Open in IMG/M
3300012207\|Ga0137381_10937508	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300012207\|Ga0137381_10956153	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	740	Open in IMG/M
3300012208\|Ga0137376_10051784	All Organisms → cellular organisms → Bacteria	3361	Open in IMG/M
3300012208\|Ga0137376_10557377	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	993	Open in IMG/M
3300012209\|Ga0137379_11036913	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	725	Open in IMG/M
3300012210\|Ga0137378_10040502	All Organisms → cellular organisms → Bacteria	4165	Open in IMG/M
3300012211\|Ga0137377_10061349	All Organisms → cellular organisms → Bacteria	3501	Open in IMG/M
3300012211\|Ga0137377_11379074	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	634	Open in IMG/M
3300012211\|Ga0137377_11453586	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	613	Open in IMG/M
3300012225\|Ga0137434_1080037	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	522	Open in IMG/M
3300012285\|Ga0137370_10340179	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300012349\|Ga0137387_10561190	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	828	Open in IMG/M
3300012351\|Ga0137386_10770060	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	691	Open in IMG/M
3300012353\|Ga0137367_10605388	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	767	Open in IMG/M
3300012361\|Ga0137360_11437181	Not Available	593	Open in IMG/M
3300012373\|Ga0134042_1057345	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	647	Open in IMG/M
3300012373\|Ga0134042_1126150	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300012380\|Ga0134047_1004379	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1110	Open in IMG/M
3300012386\|Ga0134046_1005557	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1208	Open in IMG/M
3300012392\|Ga0134043_1273979	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	720	Open in IMG/M
3300012395\|Ga0134044_1102308	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	713	Open in IMG/M
3300012398\|Ga0134051_1017098	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	672	Open in IMG/M
3300012406\|Ga0134053_1431707	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300012407\|Ga0134050_1024455	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	630	Open in IMG/M
3300012409\|Ga0134045_1091888	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	562	Open in IMG/M
3300012409\|Ga0134045_1296512	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	645	Open in IMG/M
3300012683\|Ga0137398_10329695	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1030	Open in IMG/M
3300012683\|Ga0137398_10889421	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	621	Open in IMG/M
3300012685\|Ga0137397_10413655	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1004	Open in IMG/M
3300012917\|Ga0137395_10601457	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	795	Open in IMG/M
3300012918\|Ga0137396_10180968	Not Available	1545	Open in IMG/M
3300012918\|Ga0137396_10600278	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300012930\|Ga0137407_10257494	Not Available	1584	Open in IMG/M
3300012944\|Ga0137410_10275426	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300012944\|Ga0137410_10730374	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	827	Open in IMG/M
3300012976\|Ga0134076_10361299	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	640	Open in IMG/M
3300015241\|Ga0137418_10895879	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	653	Open in IMG/M
3300015245\|Ga0137409_10705046	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	843	Open in IMG/M
3300015245\|Ga0137409_10725934	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	828	Open in IMG/M
3300015358\|Ga0134089_10106199	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1080	Open in IMG/M
3300017654\|Ga0134069_1023149	All Organisms → cellular organisms → Bacteria	1874	Open in IMG/M
3300017656\|Ga0134112_10170616	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	843	Open in IMG/M
3300017659\|Ga0134083_10186245	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	852	Open in IMG/M
3300018431\|Ga0066655_10224073	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1181	Open in IMG/M
3300025918\|Ga0207662_10408043	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	922	Open in IMG/M
3300026285\|Ga0209438_1058191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1273	Open in IMG/M
3300026307\|Ga0209469_1088819	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300026324\|Ga0209470_1206396	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300026325\|Ga0209152_10256070	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	651	Open in IMG/M
3300026326\|Ga0209801_1367984	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	507	Open in IMG/M
3300026329\|Ga0209375_1188011	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	804	Open in IMG/M
3300026333\|Ga0209158_1077344	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1302	Open in IMG/M
3300026343\|Ga0209159_1008883	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	6170	Open in IMG/M
3300026528\|Ga0209378_1087280	All Organisms → cellular organisms → Bacteria	1398	Open in IMG/M
3300027013\|Ga0209884_1011971	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300027643\|Ga0209076_1039475	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300027882\|Ga0209590_10896295	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	559	Open in IMG/M
3300027909\|Ga0209382_10342872	All Organisms → cellular organisms → Bacteria	1676	Open in IMG/M
3300028536\|Ga0137415_10307824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1388	Open in IMG/M
3300028828\|Ga0307312_10354378	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	960	Open in IMG/M
3300031421\|Ga0308194_10385800	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300032180\|Ga0307471_103578264	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	550	Open in IMG/M
3300033407\|Ga0214472_10339451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1422	Open in IMG/M
3300033412\|Ga0310810_10167799	All Organisms → cellular organisms → Bacteria	2527	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.75%
Host-Associated	Host-Associated	3.25%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.94%
Plants	Host-Associated → Plants	3.25%
Aquatic	Environmental → Aquatic	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.44%
Sediment	Environmental → Aquatic → Sediment	0.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.06%
Loam	Environmental → Terrestrial → Soil → Loam	4.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%
Sand	Environmental → Terrestrial → Soil → Sand	0.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	63.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	24.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.44%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.81%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.81%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	39.02%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	20.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	19.51%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.44%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.44%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.44%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.63%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.81%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012225	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT860_2	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012386	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012392	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012395	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012398	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012407	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300027013	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062595_1000032461	3300004479	Soil	PLEELGRTHSDILATSEDEQFGAALDRASKEIFGISLTQMAGVTRQDGARRFPSGQRTMLWVTRNLPLSMGQLAEKARQYFQNDGAVRPQP*
Ga0062594_1030745461	3300005093	Soil	MDTQSEHAYARPLEELGRTHSDILGTREDERFGAALDRASRDLFGISLTQMVGAADQDGTRRFPSGQRTMLWVKRNLPTSAAQLVARARVYYSADRS*
Ga0066679_102973631	3300005176	Soil	LEELGGTFSDILGTPEDERFEVALDRASKEIFGISLSQMAGMTKQDGARRFPGGQRTMLWVKRNLPMSTAQLAERARRYYQESPDRRAP*
Ga0066685_101903632	3300005180	Soil	QSEHSYAAPLEELGRTHSDILGTPEDEEFGVALDRASKEIFGISLTQMAGVSKQEETRRFPSGQRTMLWVKRNLPLSTSQLAERARHYFRNSHAA*
Ga0066685_104808742	3300005180	Soil	PEDEEFGMALDRASKEIFGISLTQMAGVTRQEGARRFPTGQRAMLWVKRNLPLSSTQLAEKARQYFRDSRAP*
Ga0066678_102738371	3300005181	Soil	QSEHSYAAPLEELGRTHSDILSTPEDERFGIALDRASKEMFGISLTQMTGVSKEDGARFPSGQRTMLWVKRNLPMSTAQLAERARHYFRDIHA*
Ga0070687_1010451171	3300005343	Switchgrass Rhizosphere	AHTFSLFCGYTMDTQSEHAYARPLEELGRTHSDILGTREDERFGAALDRASRDLFGISLTQMVGAADQDGTRRFPSGQRTMLWVKRNLPTSAAQLVARARVYYSADRS*
Ga0066689_102203672	3300005447	Soil	LASALWQAGETAAAIRIEDFWNALAGTYPFSLYCGYTMDTQSEHSYAAPLEELGRTHSDILGTPEDEEFGVALDRASKEIFGISLTQMAGVSKQEETRRFPSGQRTMLWVKRNLPLSTSQLAERARHYFRNSHAA*
Ga0070707_1015731831	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	GRTHSDILSTPDDEQFGVALDRASKEIFGISLTQMSGVSRQDGARRFPSGQRTMLWVKRNLPLSTAQLAEKARQYFRENRP*
Ga0070707_1022782321	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	AGPLEELGRTHSDILGTPEDERFGIALDKASKEIFGVSLTQMAGMSRTSSARRFPSGQRTMLWVKRNLPLTSAQLVQKARQYFQDGQTA*
Ga0070697_1002998472	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LGRTHTDILGTPDDEQFAVSLDRASKEIFGISLTQMAGVSRPEGARRFPSGQRTMLWVKRNLPMSSGQLAERARQYFRDNRA*
Ga0066695_102075731	3300005553	Soil	APEDEEFGMALDRASKEIFGISLTQMAGVTRQEGARRFPTGQRAMLWVKRNLPLSSTQLAEKARQYFRDSRAP*
Ga0066695_108152541	3300005553	Soil	SLYCGYTMDTHSEQAYAGPVEELGRTHSDILATPEDEEFGQALDRASKEVFGISLTQMAAVSRQEGARRFPTGQRAMLWVKRNLPMSSAQLAEKARQYFRDSRAP*
Ga0066661_101293681	3300005554	Soil	GPLEDIGHTHTDILGSEEDERFGIALDRASKEVFGITLSQMAGMTNHDGARRFPSGQRTMLWVKRNLPLSTAQLAERARRYLQEFLPKRS*
Ga0066699_106525691	3300005561	Soil	GRTHTDILGTPEDEQFGIALDRASKEIFGISLTQMAGVSRHDGARRFPSGQRAMLWVKRNLPMSTAQLAERARHYFKSNHA*
Ga0066703_100865131	3300005568	Soil	EDFWNALAGTYPFSLYCGYTMDTHSEHAYAAPLEELGRTHSDILSTPEDERFGVALDRASKEMFGISLTQMTGVSKEDGARFPSGQRTMLWVKRNLPMSTSQLAERARHYFRDIHA*
Ga0066705_107038132	3300005569	Soil	EELGGTFSDILGTPEDERFEVALDRASKEIFGISLSQMAGMTKQDGARRFPGGQRTMLWVKRNLPMSTAQLAERARRYYQESPDRRAP*
Ga0066706_104391811	3300005598	Soil	ANALWQAGNTAAAIQVEDFWNALAGTYTFSLYCGYTMDTHSEHSYAAPLEELGRTHSDILGTPEDEEFGVALDRASKEIFGISLTQMAALSKQEEARRFPSGQRTMLWVKRNLPLSTSQLAERARHYFRDNHAA*
Ga0066706_111988042	3300005598	Soil	HSEHSYAAPLEELGRTHSDILGTPEDEEFGVALDRASKEIFGISLTQMAAVSKQDATRRFPSGQRTMLWVKRNLPLSTSQLAERARHYFRDSHAA*
Ga0068858_1020830881	3300005842	Switchgrass Rhizosphere	MDTQSEHAYARPLEELGRTHSDILGTREDECFGAALDRASRDLFGISLTQMVGAADQDGTRRFPSGQRTMLWVKRNLPTSAAQLVARARVYYSADRS*
Ga0066696_108696552	3300006032	Soil	SDILATPEDEEFGMALDRASKEIFGISLTQMAGVSRQEGARRFPTGQRAMLWVKRNLPLSSTQLAEKARQYFRDSRAP*
Ga0066665_109916342	3300006796	Soil	AYPFSLYCGFTVDTHSEKSYVGPLEELGRTHSEILGTPEDEQWGVALDRASKEIFGISLTQMAGVTRQDGARRFPSGQRTMLWVKRNLPLSTAQLAERARRYVQEFLPKRS*
Ga0066660_101168811	3300006800	Soil	DFWNAMAGTYPFALYCGYTMDTHCEKAYAAPLEELGRTHTDILGTPEDEQFGIALDRASKEIFGISLTQMAGVSRQDGARRFPSGQRAMLWVKRNLPMSTAQLAERARHYFKSNHA*
Ga0075431_1016850671	3300006847	Populus Rhizosphere	GTQDDERFGAALDRASKEIFGISLSQMAGTTKHDGARRFPSAQRTMLWVKRNLPLTTSKLVERARRHLEEFSAGPQ*
Ga0099793_104654212	3300007258	Vadose Zone Soil	ELGRTHSDILGTPEDEEFGVALDRASKEIFGISLTQMAGLSKQEDARRFPTGQRTMLWVKRNLPLSTSQLAERARHYFREKSA*
Ga0099794_102315892	3300007265	Vadose Zone Soil	APLEELGRTHSDILGTPEDEEFGVALDRASKEIFGISLTQMAGVSKEDETRRFPSGQRTMLWVKRNLPLSTSQLAERARHYFRDSHAA*
Ga0099795_100836991	3300007788	Vadose Zone Soil	LYCGYTMDTHCEKAYAAPLEELGRTHTEILGTPEDEQFGMALDRASKEIFGISLTQMAGISRQDGARRFPSGQRAMLWVKRNLPMSTAQLAERARHYFKDNRA*
Ga0066710_1000327291	3300009012	Grasslands Soil	GTRVYSEMANALWQAGNTAAAIQIEDFWNALAGTYTFSLYCGYTMDTHSEHSYAAPLEELGRTHSDILGTPEDEEFAGALDRASKEIFGISLTQMAALSKQEEARRFPSGQRTMLWVKRNLPLSTSQLAERARHYFRDSHAA
Ga0066710_1002758533	3300009012	Grasslands Soil	PLEDIGHTHTDILGSEEDERFGIALDRASKEVFGITLSQMAGMTNHDGARRFPSGQRTMLWVKRNLPLSTAQLAERARRYLQEFSPKRS
Ga0066710_1028810401	3300009012	Grasslands Soil	LGTPEDEQWGVALDRASKEIFGISLTQMAGVTRQDGARRFPSGQRTMLWVKRNLPLSTAQLAEKARQYFRLNGG
Ga0099827_104439601	3300009090	Vadose Zone Soil	DILGTPEDEEFGVALDRASKEIFGISLPQMAGLSKQEEARRFPSGQRTMLWVKRNLPLSTAQLADRARHYFRDSHAA*
Ga0099827_111113721	3300009090	Vadose Zone Soil	PEDEEFGMALDRASKEIFGISLTQMASVSRQEGAHRFPTGQRAMLWVKRNLPMSSSQLAEKARQYFRDSRAP*
Ga0099827_114487981	3300009090	Vadose Zone Soil	EDFWNTLAGTYAFSLYCGYTMDTQSEHSYAAPLEELGRTHSDIIGTPDDEQFGVALDRASKEIFGISLTQMSGVSRQDGALRFPSGQRTMLWVKRNLPMSSAQLAEKARQYFRETHP*
Ga0066709_1013169392	3300009137	Grasslands Soil	YTQSEHAYAGPLEELGLTHSDILGTPEDEQFGVALDRASKDIFGISLTQMAGMSRTSGARRFPSGQRTMLWVKRNLPLTSAQLVQKARQYFQDGHP*
Ga0075423_102890911	3300009162	Populus Rhizosphere	LEELGRTHAEILGTPEDEEFGMALDRASKEIFGVSLTQMAGVSRKDGARRFPSGQRAMLWVTRNLPLSSVQLADRARQYFRDGRA*
Ga0099796_102367631	3300010159	Vadose Zone Soil	TMDTHCEKAYAAPLEELGRTHTEILGTPEDEQFGMALDRASKEIFGISLTQMAGISRQDGARRFPSGQRTMLWVKRNLPSASAAVLERARRYYEDSLQ*
Ga0134109_101743342	3300010320	Grasslands Soil	LEELGRTHSEILGTPEDEQFGAALDRASKEIFGIALTQMAGVTRQDGARRFPSGQRTMLWVKRNLPMSTTQLVEKARQYFRLNGGNGAA*
Ga0134084_103539592	3300010322	Grasslands Soil	NALASTFSFSLYCGYTMDTQSEHSYAAPLEELGRTHSDILGTPEDEEFGVALDRASKEIFGISLTQMTGVSKEEGARRFPSGQRTMLWVKRNLPMSTAQLAERARHYFRDTRA*
Ga0134064_101292772	3300010325	Grasslands Soil	PEDEEFGVALDRASKEIFGIPLTQMAGLSKHDETRRFPSGQRTMLWVKRNLPLSTSQLAERARKYFRDIHP*
Ga0134064_102251741	3300010325	Grasslands Soil	EDIGHTHTDILGSEEDERFGIALDRASKEVFGITLSQMAGMTNHDGARRFPSGQRTMLWVKRNLPLSTAQLAERARRYLQEFSPKRS*
Ga0134111_105499212	3300010329	Grasslands Soil	LWKAGNTSGAIRVEDFWNALAGTYPFSLYCGYTMDTQSEHSYAAPLEELGRTHSDILGTPEDEQFGIALDRASKEIFGISLTQVTGVSKEDGARFPSGQRTMLWVKRNLPLSTSQLAERARHFFRDSRA*
Ga0134080_101628071	3300010333	Grasslands Soil	GRTHTDILGTPEDDEFSVALDRASKEIFGIPLTQMAGLSKHDETRRFPSGQRTMLWVKRNLPLSTSQLAERARHYFRNSHAA*
Ga0134071_104264412	3300010336	Grasslands Soil	YAFSLYCGYTMDTHSEQAYAGPVEELGRTHSDILATPEDEEFGMALDRASKEIFGISLTQMASVSRQEGAHRFPTGQRAMLWVKRNLPSASAAVLERARRYYEASLR*
Ga0134062_103444901	3300010337	Grasslands Soil	HSYTAPLEELGRTHSDILGTPEDEEFGVALDRASKEIFGISLTQMTGVSKEDGARRFPSGQRTMLWVKRNLPMSTAQLAERARHYFRDTRA*
Ga0134066_102512052	3300010364	Grasslands Soil	FWNALGSAYPFSLYCGFTVDTHSENSYVGPLEELGRTHSEILGTPEDEQWGVALDRASKEIFGISLTQMAGVTRQDGARRFPSGQRTMLWVKRNLPLSTAQLAEKARQYFRLNGG*
Ga0134122_100792843	3300010400	Terrestrial Soil	DILGTREDERFGAALDRASRDLFGISLTQMVGAADQDGTRRFPSGQRTMLWVKRNLPTSAAQLVERARVYYSADRS*
Ga0134123_125048671	3300010403	Terrestrial Soil	YAGPLEELGRTHSDIVGTPEDEEFSVALDRASKEIFGIALTQMAGISKQDETRRFPSGQRTMLWVKRNLPLSTPQLAERARHYFRDSRA*
Ga0137392_100233261	3300011269	Vadose Zone Soil	NALAGTYPFSLYCGYTMDTHSEHSYAAPLEELGRTHSDILGTPEDEEFGIALDRASKEIFGIALTQMAGVSKQDETRRFPSGQRTMLWVKRNLPLSTSQLAERARHYFRDRHA*
Ga0137393_103334891	3300011271	Vadose Zone Soil	YSELANALWQAGKTAAAILVEDFWNALAGTYPFSLYCGYTMDTHSEHSYAAPLEELGRTHSDILGTPEDEEFGVALDRASKEIFGISLTQMAGVSKEDETRRFPSGQRTMLWVKRNLPLSTSQLAERARHYFRDSHAA*
Ga0137389_100124296	3300012096	Vadose Zone Soil	EDFWNALAGTYPFSLYCGYTMDTHSEHSYAAPLEELGRTHSDILGTPEDEEFGVALDRASKEIFGISLTQMAGVSKEDETRRFPSGQRTMLWVKRNLPLSTSQLAERARHYFRDSHAA*
Ga0137388_104078442	3300012189	Vadose Zone Soil	EDFWNALAGTYPFSLYCGYTMDTHSEHSYAAPLEELGRTHSDILGTPEDEEFGIALDRASKEIFGIALTQMAGVSKQDETRRFPSGQRTMLWVKRNLPLSTSQLAERARHYVRDRHA*
Ga0137388_106477912	3300012189	Vadose Zone Soil	SLYCGYTMDTHSEHAYAAPLEELGRTHSDILGTPEDEEFSVALDRASKEIFGISLSQMAGVSKRDETRRFPSGQRTMLWVKRNLPLSTSQLVERARHYFRDSRA*
Ga0137383_106559791	3300012199	Vadose Zone Soil	LGRTHSDILSTPEDEQFGVALDRASKEIFGISLTQMAGVSKQEGARRFPSGQRTMLWVKRNLPMSTAQIVERARHYFRDSHA*
Ga0137382_101381181	3300012200	Vadose Zone Soil	YAGPLEELGRTHSDILGTPEDEQFGVALDRASKDIFGISLTQMAGMSRTSGARRFPSGQRTMLWVKRNLPLTSSQLVQKARQYFQDGHP*
Ga0137365_108313111	3300012201	Vadose Zone Soil	AGPVEELGRTHSDILATPEDEEFGQALDRASKEVFGISLTQMAAVSRQEGARRFPTGQRAMLWVKRNLPMSSAQLAEKARQYFRDSRAP*
Ga0137399_106164831	3300012203	Vadose Zone Soil	CGFTVDTHSEHSYVGPLEELGRTHSEILGTPEDEQWGVALDRASKEIFGISLTQMAGVTRQDGARRFPSGQRTMLWVKRNLPMSTAQLAEKARQYFRLNGG*
Ga0137399_106943881	3300012203	Vadose Zone Soil	THSDILGTPEDEEFGVALDRASKEIFGIALTQMAGVSTQEGARRFPSGQRAMLWVKRNLPLSTSQLAERARHYFRDSHA*
Ga0137399_108676361	3300012203	Vadose Zone Soil	HSDILGTPEDERLGVALDRASKEIFGIPLTQMAGVSRHDGARRFPSGQRTMLWVKRNLPMSTAQLVARARKYFGDIHA*
Ga0137380_109974491	3300012206	Vadose Zone Soil	ELGRTHSDILATPEDEEFGMALDRASKEIFGISLTQMASVSRQEGAHRFPTGQRAMLWVKRNLPMSSSQLAEKARQYFRDSRAP*
Ga0137381_109375082	3300012207	Vadose Zone Soil	SDIIGTPDDEQFGVALDRASKEIFGISLTQMSGVSRQDGAHRFPSGQRTMLWVKRNLPMSSAQLAEKARQYFREHHA*
Ga0137381_109561532	3300012207	Vadose Zone Soil	FSLYCGYTMDTHSEQAYAGPVEELGRTHSDILATPEDEEFGQALDRASKEVFGISLTQMAAVSRQEGARRFPTGQRAMLWVKRNLPMSSAQLAEKARQYFRDSRAP*
Ga0137376_100517841	3300012208	Vadose Zone Soil	ILSTPEDERFGVALDRASKEIFGIPLTQMAGLSKHDETRRFPSGQRTMLWVKRNLPLSTSQLAERARKYFRDIHP*
Ga0137376_105573771	3300012208	Vadose Zone Soil	ELGRTHSDILSTPEDEQFGVALDRASKEIFGISLTQMAGVTKQEGARRFPSGQRTMLWVKRNLPMSTAQIVERARHYFRDSHP*
Ga0137379_110369131	3300012209	Vadose Zone Soil	FSLYCGYTMDTHSEQAYAGPVEELGRTHSDILATPEDEEFGMALDRASKEIFGISLTQMASVSRQEGAHRFPTGQRAMLWVKRNLPMSSSQLAEKARQYFRDSRAP*
Ga0137378_100405025	3300012210	Vadose Zone Soil	ALARTYAFSLYCGYTMDTHSEQAYAGPVEELGRTPSDILATPEDEEFGQALDRASKEVFGISLTQMAAVSRQEGARRFPTGQRAMLWVKRNLPMSSAQLAEKARQYFRDSRAP*
Ga0137377_100613491	3300012211	Vadose Zone Soil	CGYTMDTQSEHSYAAPLEELGRTHSDILGTPEDEEFGVALDRASKEIFGISLTQMTGVSKEDGARRFPSGQRTMLWVKRNLPMSTAQLAERARHYFRDTRA*
Ga0137377_113790742	3300012211	Vadose Zone Soil	HSDILSTPEDEQFGVALDRASKEIFGISLTQMAGVTKQEGARRFPSGQRTMLWVKRNLPMSTAQIVERARHYFRDSHP*
Ga0137377_114535861	3300012211	Vadose Zone Soil	ILSTPEDERFGVALDRASKEMFGISLTQMTGVSKEDGARFPSGQRTMLWVKRNLPMSTSQLAERARHYFRDIHA*
Ga0137434_10800372	3300012225	Soil	LGRTHSDILGTPEDERFGMALDRASKEIFGISLSQMAGVSKQDGMRRFPSGQRIMLWVKRNLPMSTAQLAERARHHFRDAPRNTR*
Ga0137370_103401791	3300012285	Vadose Zone Soil	ALAGAYPFALYCGFTLDTHCEHSYTGPLEELGRTHSDILGSPEDERFSVALDRASKEVFGISLTQMAGVTRQDGARKFPSGQRTMLWVKRNLPMSTPQLADKARQYFKELRS*
Ga0137387_105611902	3300012349	Vadose Zone Soil	EVANALWQAGNTAAAVRVEDFWNALAGTYPISLYCVYTMDTHSEDSYAAPLEELGRTHSDILGTPEDEEFGVALDRASKEIFGISLTQMAGLSKKDDARRFPTGLRTMLWVKRNLPLSTSQLAERARHYFRDRHAA*
Ga0137386_107700602	3300012351	Vadose Zone Soil	EDFWNALAGTYPISLYCGYTMDTQSENSYAAPLEELGRTHSDILGTPEDEEFGVALDRASKEIFGISLTQMAGVSKQEETRRFPSGQRTMLWVKRNLPLSTSQLAERARHYFRENHAA*
Ga0137367_106053882	3300012353	Vadose Zone Soil	EELGRTHSDIVGTPDDEEFSVALDRASKEIFGIALTQMAGISKQDETRRFPTGQRTMLWVKRNLPLSTPQLAERARHYFRDRHA*
Ga0137360_114371811	3300012361	Vadose Zone Soil	TPEDEQFGVALDRASKDIFGISLTQMAGMSRTSGARRFPSGQRTMLWVKRNLPLTSAQLVQKARQYFQDGHP*
Ga0134042_10573452	3300012373	Grasslands Soil	LGRTHSDILGTPEDEEFGVALDRASKEIFGISLTQMTGVSKEEGARRFPSGQRTMLWVKRNLPMSTAQLAERARHYFRDTRA*
Ga0134042_11261502	3300012373	Grasslands Soil	SGTYAFSLYCGYTMDTQSEHSYAAPLEELGRTHSDIVGTPDDEQFGVALDRASKEIFGISLTQMSGVSRQDGARRFPSGQRTMLWVKRNLPLSTAQLAEKARQYFRETHA*
Ga0134047_10043792	3300012380	Grasslands Soil	GRTHSDILGTPEDEEFGVALDRASKEIFGISLTQMTGVSKEEGARRFPSGQRTMLWVKRNLPMSTAQLAERARHYFRDTRA*
Ga0134046_10055571	3300012386	Grasslands Soil	QSEHSYAAPLEELGRTHSDILGTPEDEEFGVALDRASKEIFGISLTQMTGVSKEDGARRFPSGQRTMLWVKRNLPMSTAQLAERARHYFRDTRA*
Ga0134043_12739792	3300012392	Grasslands Soil	FWNALASTYSFSLYCGYTMDTQSEHSYTAPLEELGRTHSDILGTPEDEEFGVALDRASKEIFGISLTQMTGVSKEEGARRFPSGQRTMLWVKRNLPMSTAQLAERARHYFRDTRA*
Ga0134044_11023082	3300012395	Grasslands Soil	SLYCGYTMDTQSEHSYAAPLEELGRTHSDILGTPEDEEFGVALDRASKEIFGISLTQMTGVSKEEGARRFPSGQRTMLWVKRNLPMSTAQLAERARHYFRDTRA*
Ga0134051_10170982	3300012398	Grasslands Soil	APLEELGRTHSDILGTPEDEEFGVALDRASKEIFGISLTQMTGVSKEEGARRFPSGQRTMLWVKRNLPMSTAQLAERARHYFRDTRA*
Ga0134053_14317072	3300012406	Grasslands Soil	VLWKAGNTGGAIRVEDFWNALAGTYPFSLYCGYTMDTQSEHSYAAPLEELGRTHTDILGTPEDDEFSVALDRASKEIFGIALTQMAGISKQDETRRFPSGQRTMLWVKRNLPLSTSQLAERARHFFRDSRA*
Ga0134050_10244552	3300012407	Grasslands Soil	EELGRTHSDILAAPEDEEFGMALDRASKEIFGISLTQMAGVTRQEGARRFPTGQRAMLWVKRNLPLSSTQLAEKARQYFRDSRAP*
Ga0134045_10918881	3300012409	Grasslands Soil	LYCGYTMDTQSEHSYAAPLEELGRTHTDILGTPEDDEFSVALDRASKEIFGIALTQMAGISKQDETRRFPSGQRTMLWVKRNLPLSTSQLAERARHYFRNSHAA*
Ga0134045_12965121	3300012409	Grasslands Soil	LVSTFSFSLYCGYTMDTQSEHSYTAPLEELGRTHSDILGTPEDEEFGVALDRASKEIFGISLTQMTGVSKEDGARRFPSGQRTMLWVKRNLPMSTAQLAERARHYFRDTRA*
Ga0137398_103296952	3300012683	Vadose Zone Soil	LGRTHTDILGTPDDEQFGVALDRASKDIFGISLTQMAGVSRQEGARRFPSGQRTMLWVKRNLPMSTAQLAERARQYFRENRA*
Ga0137398_108894212	3300012683	Vadose Zone Soil	GTPEDDEFSVALDRASKEIFGIALTQMAGISKQDETRRFPTGQRTMLWVKRNLPLSTPQLAERARHYFRDRRA*
Ga0137397_104136551	3300012685	Vadose Zone Soil	LEELGRTHSDILGTPEDEEFGIALDRASKEMFGIALTQMAGLSKHDETRRFPSGQRTMLWVKRNLPLSTSQLAERARHYFRDRHA*
Ga0137395_106014571	3300012917	Vadose Zone Soil	ILSTPDDEQFGVALDRASKEIFGISLTQMSGVSRQDGARRFPSGQRTMLWVKRNLPLSTAQLAEKARQYFRENRP*
Ga0137396_101809681	3300012918	Vadose Zone Soil	DILGTPEDEQLGVALDRASKEIFGIPLTQMAGVSRHDGARRFPSGQRTMLWVKRNLPMSTAQLVARARKYFGDIHA*
Ga0137396_106002781	3300012918	Vadose Zone Soil	MANALWQAGNTVGAVRIEDFWNALAGTYPFSLYCGYTMDTQSEHAYAAPLEELGRTHSDILSTPEDERFGVALDRASKEMFGISLTQMTGVSKEDGARFPSGQRTMLWVKRNLPMSTSQLAERARHYFRDIHA*
Ga0137407_102574942	3300012930	Vadose Zone Soil	HTDILGTPDDEQFGVALDRASKDIFGISLTQMAGVSRQEGARRFPSGQRTMLWVKRNLPMSTAQLAERARQYFRENRA*
Ga0137410_102754262	3300012944	Vadose Zone Soil	APLEELGRTHSDILGTPEDEEFGVALDRASKEMFGIALTQMAGLSKQDETRRFPSGQRTMLWVKRNLPLSTSQLAERARHYFRDSRV*
Ga0137410_107303742	3300012944	Vadose Zone Soil	EELGRTHSDILGTPEDEEFGIALDRASKEMFGIALTQMAGLSKHDETRRFPSGQRTMLWVKRNLPLSTSQLAERARHYFRDRHA*
Ga0134076_103612992	3300012976	Grasslands Soil	FWNAMAADYQFSLYCGYTMDTYSEQSYAAPLEELGRTHSDILGTPEDERFGVALDRASKEIFGIPLTHMAGVSRHDAARRFPSGQRTMLWVKRNLPMSSPQLVARARKYFTDSHV*
Ga0137418_108958791	3300015241	Vadose Zone Soil	EELGRTHSDIVGTPEDEEFSVALDRASKEIFGIALTQMAGISKQDETRRFPTGQRTMLWVKRNLPLSTPQLAERARHYFRDSRA*
Ga0137409_107050461	3300015245	Vadose Zone Soil	AAPLEELGRTHSDILGTPEDEEFGVALDRASKEIFGISLTQMAGSSKQEDARRFPTGQRTMLWVKRNLPLSTSQLAERARHYFRDSHAA*
Ga0137409_107259341	3300015245	Vadose Zone Soil	AAPLEELGRTHSDILGTPEDEEFGVALDRASKEMFGIALTQMAGLSKQDETRRFPSGQRTMLWVKRNLPLSTSQLAERARHYFRDSRV*
Ga0134089_101061992	3300015358	Grasslands Soil	YTMDTHSEQAYAGPVEELGRTHSDILATPEDEEFGMALDRASKEIFGISLTQMASVSRQEGAHRFPTGQRAMLWVKRNLPMSSSQLAEKARQYFRDSRAP*
Ga0134069_10231492	3300017654	Grasslands Soil	LWHGGNTEAAIRIEDFWNALASTFSFSLYCGYTMDTQSEHSYAAPLEELGRTHSDILGTPEDEEFGVALDRASKEIFGISLTQMTGVSKEEGARRFPSGQRTMLWVKRNLPMSTAQLAERARHYFRDTRA
Ga0134112_101706161	3300017656	Grasslands Soil	GRTHSDILGTPEDEQFGMALDRASKEMFGIAFTQMAGLSKQDEARRFPSGQRTMLWVKRNLPLSTSQLAERARHYFRDRHT
Ga0134083_101862451	3300017659	Grasslands Soil	HSYAAPLEELGRTHSDILGTPEDEQFGMALDRASKEMFGIAFTQMAGLSKQDEARRFPSGQRTMLWVKRNLPLSTSQLAERARHYFRDRHT
Ga0066655_102240731	3300018431	Grasslands Soil	NALAGTYAFSLYCGYTMDTQSEHSYAAPLEELGRTHSDILSTPEDERFGIALDRASKEMFGISLTQMTGVSKEDGARFPSGQRTMLWVKRNLPMSTAQLAERARHYFRDIRA
Ga0207662_104080431	3300025918	Switchgrass Rhizosphere	AAHTFSLFCGYTMDTQSEHAYARPLEELGRTHSDILGTREDERFGAALDRASRDLFGISLTQMVGAADQDGTRRFPSGQRTMLWVKRNLPTSAAQLVARARVYYSADRS
Ga0209438_10581912	3300026285	Grasslands Soil	LGTPEDEEFGVALDRASKEIFGISLTQMTGISKEDGARRFPSGQRTMLWVKRNLPMSTAQLAERARHYFRETRA
Ga0209469_10888193	3300026307	Soil	LPTACRDTRVYSEIANALWHGGNTEAAIRIEDFWNALASTFSFSLYCGYTMDTQSEHSYAAPLEELGRTHSDILGTPEDEEFGVALDRASKEIFGISLTQMTGVSKEEGARRFPSGQRTMLWVKRNLPMSTAQLAERARHYFRDTRA
Ga0209470_12063962	3300026324	Soil	ENSYVGPLEELGRTHSEILGTPEDEQWGVALDRASKEIFGISLTQMAGVTRQDGARRFPSGQRTMLWVKRNLPLSTAQLAEKARQYFRLNGG
Ga0209152_102560701	3300026325	Soil	EHAYAAPLEELGRTHSDILSTPEDERFGVALDRASKEMFGISLTQMTGVSKEDGARFPSGQRTMLWVKRNLPMSTSQLAERARHYFRDIHA
Ga0209801_13679841	3300026326	Soil	SEHSYAAPLEELGRTHSDILSTPEDERFGIALDRASKEMFGISLTQMTGVSKEDGARFPSGQRTMLWVKRNLPMSTAQLAERARHYFRDIHA
Ga0209375_11880112	3300026329	Soil	EELGRTHSDILGTPEDEEFGVALDRASKEIFGISLTQMTGVSKEDGARRFPSGQRTMLWVKRNLPMSTAQLAERARHYFRDTRA
Ga0209158_10773441	3300026333	Soil	QAGNTAGAIRIEDFWNALAGTYPFSLYCGYTMDTHSEHAYAAPLEELGRTHSDILSTPEDERFGVALDRASKEMFGISLTQMTGVSKEDGARFPSGQRTMLWVKRNLPMSTSQLAERARHYFRDIHA
Ga0209159_10088831	3300026343	Soil	APEDEEFGMALDRASKEIFGISLTQMAGVTRQEGARRFPTGQRAMLWVKRNLPLSSTQLAEKARQYFRDSRAP
Ga0209378_10872801	3300026528	Soil	IEDFWNALAGTYPFSLYCGYTMDTQSEHSYAAPLEELGRTHSDILGTPEDEEFGVALDRASKEIFGISLTQMAGVSKQEETRRFPSGQRTMLWVKRNLPLSTSQLAERARHYFRNSHAA
Ga0209884_10119711	3300027013	Groundwater Sand	LAVTYPFSLYCGYTMDTQSEHSYAAPLEELGRTHSDILGTPDDEQFGVALDRASKEIFGISLTQMAGISKQDGARRFPSGQRTMLWVKRNLPLSTPQLAERARHYFREGHP
Ga0209076_10394751	3300027643	Vadose Zone Soil	MDTQSEHSYAAPLEELGRTHSDILGTPEDEEFGVALDRASKEMFGIALTQMAGLSKQDETRRFPSGQRTMLWVKRNLPLSTSQLAERARHYFRDSRV
Ga0209590_108962951	3300027882	Vadose Zone Soil	ATPEDEEFGMALDRASKEIFGISLTQMASVSRQEGAHRFPTGQRAMLWVKRNLPMSSSQLAEKARQYFRDSRAP
Ga0209382_103428721	3300027909	Populus Rhizosphere	SHTFSLFCGYTMDTLSAHAYEQPLEELGRTHSDILGTTDDERFGVALDRASKELFGIDLTQMAGVTRQDGARRFPSGQRAMLWVTRNLPMSMGQLVERARTYFKND
Ga0137415_103078241	3300028536	Vadose Zone Soil	FSLYCGYTMDTQSEHAYAAPLEELGRTHSDILGTPEDEEFGVALDRASKEIFGISLTQMTGISKEDGARRFPSGQRTMLWVKRNLPMSTAQLAERARHYFRETRA
Ga0307312_103543782	3300028828	Soil	SEHAYAGPLEELGRTHSDILGTPEDEQFSIALDRASKEMFGISLTQMTGVSKEDGARFPSGQRTMLWVKRNLPMSTAQLAERARHYFRDIHA
Ga0308194_103858001	3300031421	Soil	SFSLYCGYTMDTHSEHSYAAPLEELGRTHSDILGTPEDEEFGVALDRASKEIFGIALTQMAGISKQDETRRFPSGQRTMLWVKRNLPLSTPQLAERARHYFRDSRA
Ga0307471_1035782642	3300032180	Hardwood Forest Soil	TQSEHSYAAPLEELGRTHSDILSTPEDERFGIALDRASKEIFGIALTQMAGISKLDETRRFPSGQRTMLWVKRNLPLSTPQLAERARHYFRDSRA
Ga0214472_103394511	3300033407	Soil	ALYCNYMLDTQYEESYTGPLEELGRTHTEIVGTIEDERFAAALDRASKEMFGISLSQMAGMTKLDGERRFPSGQRTMLWVKRNLPSSTTRLAEQARRYYQDLRP
Ga0310810_101677993	3300033412	Soil	LMDTHCEDAYDAPLEELGRTHSDILATSEDEQFGAALDRASKEIFGISLTQMAGVTRQDGARRFPSGQRTMLWVTRNLPLSMGQLAEKARQYFQNDGAVRPQP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069897

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences