Metagenome Family F069865

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069865
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	60 residues
Representative Sequence	MWDRKRQLIWLGVGLLFGTFSLYPLARDDAGRTDWQYFLQLEALLVLVICVMFFIYGRKK
Number of Associated Samples	81
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	51.22 %
% of genes near scaffold ends (potentially truncated)	19.51 %
% of genes from short scaffolds (< 2000 bps)	81.30 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.992 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Sand → Desert → Soil (13.821 % of family members)
Environment Ontology (ENVO)	Unclassified (21.951 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.341 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.27% β-sheet: 2.27% Coil/Unstructured: 45.45%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF00155	Aminotran_1_2	46.34
PF13519	VWA_2	12.20
PF09594	GT87	2.44
PF00092	VWA	1.63
PF14903	WG_beta_rep	1.63
PF09723	Zn-ribbon_8	1.63
PF01464	SLT	0.81
PF13442	Cytochrome_CBB3	0.81
PF00487	FA_desaturase	0.81
PF01252	Peptidase_A8	0.81
PF13649	Methyltransf_25	0.81
PF01904	DUF72	0.81
PF01551	Peptidase_M23	0.81
PF13361	UvrD_C	0.81
PF02780	Transketolase_C	0.81
PF13292	DXP_synthase_N	0.81
PF01966	HD	0.81
PF07386	DUF1499	0.81
PF00856	SET	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0597	Lipoprotein signal peptidase	Cell wall/membrane/envelope biogenesis [M]	1.63
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.81
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.81
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.81
COG4446	Uncharacterized conserved protein, DUF1499 family	Function unknown [S]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.80 %
Unclassified	root	N/A	12.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.99 %
Unclassified	root	N/A	12.20 %
Viruses	superkingdom	All Organisms → Viruses	0.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.99 %
Unclassified	root	N/A	12.20 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	65.04 %
Unclassified	root	N/A	12.20 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	21.14 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	15.45 %
Unclassified	root	N/A	12.20 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.14 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	15.45 %
Unclassified	root	N/A	12.20 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.14 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	15.45 %
Unclassified	root	N/A	12.20 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.14 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	15.45 %
Unclassified	root	N/A	12.20 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.14 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	13.82 %
Unclassified	root	N/A	12.20 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002915\|JGI25387J43893_1038939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300003203\|JGI25406J46586_10031634	All Organisms → cellular organisms → Bacteria → Acidobacteria	1976	Open in IMG/M
3300004016\|Ga0058689_10045222	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300005184\|Ga0066671_10026650	All Organisms → cellular organisms → Bacteria	2650	Open in IMG/M
3300005184\|Ga0066671_10180303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1256	Open in IMG/M
3300005364\|Ga0070673_101778862	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300005562\|Ga0058697_10648199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300005575\|Ga0066702_10698693	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300005587\|Ga0066654_10899369	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300005607\|Ga0070740_10000619	All Organisms → cellular organisms → Bacteria	67670	Open in IMG/M
3300006800\|Ga0066660_10637518	Not Available	886	Open in IMG/M
3300006876\|Ga0079217_11226350	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300006894\|Ga0079215_10236994	All Organisms → cellular organisms → Bacteria → Acidobacteria	956	Open in IMG/M
3300006894\|Ga0079215_11179067	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M
3300007790\|Ga0105679_10886217	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	2342	Open in IMG/M
3300007790\|Ga0105679_11023594	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	3939	Open in IMG/M
3300009789\|Ga0126307_11048347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300009840\|Ga0126313_11012610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300010039\|Ga0126309_10563491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300010040\|Ga0126308_10287776	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300010045\|Ga0126311_10612376	All Organisms → cellular organisms → Bacteria → Acidobacteria	863	Open in IMG/M
3300010045\|Ga0126311_11338271	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	596	Open in IMG/M
3300010166\|Ga0126306_10160328	All Organisms → cellular organisms → Bacteria → Acidobacteria	1677	Open in IMG/M
3300010166\|Ga0126306_10449030	Not Available	1014	Open in IMG/M
3300010166\|Ga0126306_10625141	Not Available	859	Open in IMG/M
3300010166\|Ga0126306_11427831	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300010321\|Ga0134067_10199271	All Organisms → cellular organisms → Bacteria → Acidobacteria	735	Open in IMG/M
3300012022\|Ga0120191_10058304	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300012093\|Ga0136632_10020972	All Organisms → cellular organisms → Bacteria	2901	Open in IMG/M
3300012093\|Ga0136632_10193293	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300012093\|Ga0136632_10197807	Not Available	917	Open in IMG/M
3300014487\|Ga0182000_10161738	Not Available	822	Open in IMG/M
3300014487\|Ga0182000_10660979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300014488\|Ga0182001_10078439	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	969	Open in IMG/M
3300014488\|Ga0182001_10258692	All Organisms → cellular organisms → Bacteria → Acidobacteria	678	Open in IMG/M
3300014488\|Ga0182001_10344327	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300014488\|Ga0182001_10457121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300017787\|Ga0183260_10098871	All Organisms → cellular organisms → Bacteria	2115	Open in IMG/M
3300017789\|Ga0136617_10999589	All Organisms → cellular organisms → Bacteria → Acidobacteria	635	Open in IMG/M
3300017789\|Ga0136617_11293562	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300017965\|Ga0190266_10555214	All Organisms → cellular organisms → Bacteria → Acidobacteria	683	Open in IMG/M
3300018465\|Ga0190269_11297035	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300018466\|Ga0190268_10738838	All Organisms → cellular organisms → Bacteria → Acidobacteria	731	Open in IMG/M
3300018468\|Ga0066662_10200041	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1578	Open in IMG/M
3300018468\|Ga0066662_10481665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1123	Open in IMG/M
3300018920\|Ga0190273_10044963	All Organisms → cellular organisms → Bacteria	2191	Open in IMG/M
3300018920\|Ga0190273_10067479	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1880	Open in IMG/M
3300018920\|Ga0190273_10636202	Not Available	813	Open in IMG/M
3300019377\|Ga0190264_10549472	Not Available	807	Open in IMG/M
3300019377\|Ga0190264_11132543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300019377\|Ga0190264_12208940	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300019487\|Ga0187893_10300665	Not Available	1143	Open in IMG/M
3300019767\|Ga0190267_11052801	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300019767\|Ga0190267_11463388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300020146\|Ga0196977_1000180	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	39865	Open in IMG/M
3300020146\|Ga0196977_1009399	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	2409	Open in IMG/M
3300020146\|Ga0196977_1048908	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300020202\|Ga0196964_10067288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1535	Open in IMG/M
3300020202\|Ga0196964_10366219	All Organisms → cellular organisms → Bacteria → Acidobacteria	691	Open in IMG/M
3300020202\|Ga0196964_10389166	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300020215\|Ga0196963_10028780	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	2354	Open in IMG/M
3300020215\|Ga0196963_10102314	All Organisms → cellular organisms → Bacteria → Acidobacteria	1205	Open in IMG/M
3300020215\|Ga0196963_10106313	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1182	Open in IMG/M
3300020215\|Ga0196963_10165429	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	949	Open in IMG/M
3300020215\|Ga0196963_10302250	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	705	Open in IMG/M
3300020215\|Ga0196963_10518361	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300021061\|Ga0196973_1007759	All Organisms → cellular organisms → Bacteria → Acidobacteria	1913	Open in IMG/M
3300021066\|Ga0196980_1089021	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300021265\|Ga0213906_101467	All Organisms → cellular organisms → Bacteria → Acidobacteria	1087	Open in IMG/M
3300021384\|Ga0213876_10000052	All Organisms → cellular organisms → Bacteria	144098	Open in IMG/M
3300021384\|Ga0213876_10120686	Not Available	1391	Open in IMG/M
3300024430\|Ga0196962_10196934	Not Available	647	Open in IMG/M
3300025918\|Ga0207662_11116076	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	561	Open in IMG/M
3300025935\|Ga0207709_11026011	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300025941\|Ga0207711_11572016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300026142\|Ga0207698_12544820	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300026300\|Ga0209027_1012026	All Organisms → cellular organisms → Bacteria → Acidobacteria	3279	Open in IMG/M
3300026300\|Ga0209027_1014723	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2956	Open in IMG/M
3300026312\|Ga0209153_1137627	All Organisms → cellular organisms → Bacteria → Acidobacteria	922	Open in IMG/M
3300026312\|Ga0209153_1173760	All Organisms → cellular organisms → Bacteria → Acidobacteria	779	Open in IMG/M
3300026312\|Ga0209153_1223808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300026527\|Ga0209059_1091264	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1268	Open in IMG/M
3300026552\|Ga0209577_10081111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2668	Open in IMG/M
3300026552\|Ga0209577_10490925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300027706\|Ga0209581_1001113	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	35423	Open in IMG/M
3300027750\|Ga0209461_10165024	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300027809\|Ga0209574_10121257	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	768	Open in IMG/M
3300028578\|Ga0272482_10002013	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	5929	Open in IMG/M
3300028880\|Ga0307300_10335185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300030513\|Ga0268242_1017438	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300030514\|Ga0268253_10114882	Not Available	798	Open in IMG/M
3300030515\|Ga0268254_10174991	Not Available	699	Open in IMG/M
3300031852\|Ga0307410_11357249	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300031995\|Ga0307409_102849904	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300032126\|Ga0307415_100785098	Not Available	868	Open in IMG/M
3300033988\|Ga0334909_007636	All Organisms → cellular organisms → Bacteria	1473	Open in IMG/M
3300034005\|Ga0334930_013558	All Organisms → cellular organisms → Bacteria → Acidobacteria	1230	Open in IMG/M
3300034006\|Ga0334934_008030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1393	Open in IMG/M
3300034007\|Ga0334936_014912	All Organisms → cellular organisms → Bacteria	1685	Open in IMG/M
3300034008\|Ga0334942_022675	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	1580	Open in IMG/M
3300034009\|Ga0334944_027867	All Organisms → cellular organisms → Bacteria → Acidobacteria	1076	Open in IMG/M
3300034009\|Ga0334944_070332	All Organisms → cellular organisms → Bacteria → Acidobacteria	662	Open in IMG/M
3300034024\|Ga0334927_033101	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300034026\|Ga0334946_000016	All Organisms → cellular organisms → Bacteria → Acidobacteria	272815	Open in IMG/M
3300034026\|Ga0334946_000882	All Organisms → Viruses → Predicted Viral	4686	Open in IMG/M
3300034026\|Ga0334946_010754	All Organisms → cellular organisms → Bacteria	1455	Open in IMG/M
3300034026\|Ga0334946_033353	Not Available	858	Open in IMG/M
3300034132\|Ga0334915_128760	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300034135\|Ga0334929_001557	All Organisms → cellular organisms → Bacteria	6478	Open in IMG/M
3300034136\|Ga0334933_082459	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300034221\|Ga0334937_215101	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300034268\|Ga0372943_0168971	All Organisms → cellular organisms → Bacteria → Acidobacteria	1340	Open in IMG/M
3300034376\|Ga0334923_007099	All Organisms → cellular organisms → Bacteria → Acidobacteria	2189	Open in IMG/M
3300034376\|Ga0334923_041749	All Organisms → cellular organisms → Bacteria → Acidobacteria	966	Open in IMG/M
3300034377\|Ga0334931_000041	All Organisms → cellular organisms → Bacteria → Acidobacteria	115507	Open in IMG/M
3300034377\|Ga0334931_034977	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300034391\|Ga0334917_014138	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300034391\|Ga0334917_015513	Not Available	1197	Open in IMG/M
3300034392\|Ga0334912_002028	All Organisms → cellular organisms → Bacteria	1744	Open in IMG/M
3300034402\|Ga0334960_000720	All Organisms → cellular organisms → Bacteria → Acidobacteria	11916	Open in IMG/M
3300034402\|Ga0334960_005311	All Organisms → cellular organisms → Bacteria → Acidobacteria	1729	Open in IMG/M
3300034687\|Ga0334905_009528	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	1385	Open in IMG/M
3300034781\|Ga0334935_001668	All Organisms → cellular organisms → Bacteria → Acidobacteria	7416	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.99%
Host-Associated	Host-Associated	13.01%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.11%
Plants	Host-Associated → Plants	13.01%
Aquatic	Environmental → Aquatic	4.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.30%
Freshwater	Environmental → Aquatic → Freshwater	4.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.88%
Phylloplane	Host-Associated → Plants → Phylloplane	3.25%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.63%
Roots	Host-Associated → Plants → Roots	1.63%
Phyllosphere	Host-Associated → Plants → Phyllosphere	1.63%
Cave	Environmental → Terrestrial → Cave	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.91%
Sand	Environmental → Terrestrial → Soil → Sand	13.82%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	9.76%
Ice	Environmental → Aquatic → Freshwater → Ice	4.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.06%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	3.25%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.63%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.63%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	1.63%
Loam	Environmental → Terrestrial → Soil → Loam	0.81%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.64%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	13.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.01%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	12.20%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	9.76%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	4.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.06%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	3.25%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.63%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.63%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	1.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.81%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.81%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	13.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.57%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	10.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.94%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	8.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.69%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	5.69%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	4.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.06%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	4.06%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	3.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.44%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Soil	1.63%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.63%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	1.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.81%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.81%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.81%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020146	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_10-13C	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300020215	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5	Environmental	Open in IMG/M
3300021061	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5-13C	Environmental	Open in IMG/M
3300021066	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3_10-13C	Environmental	Open in IMG/M
3300021265	Switchgrass-associated microbial communities from reclaimed mine lands soil in West Virginia, United States ? Hobet_Shaw_3	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300030513	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG (v2)	Environmental	Open in IMG/M
3300030514	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030515	Agave microbial communities from Guanajuato, Mexico - Or.Sf.rz (v2)	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033988	Soil microbial communities from Mojave Desert, California, United States - 5NOC	Environmental	Open in IMG/M
3300034005	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 26HNS	Environmental	Open in IMG/M
3300034006	Biocrust microbial communities from Mojave Desert, California, United States - 30SMC	Environmental	Open in IMG/M
3300034007	Biocrust microbial communities from Mojave Desert, California, United States - 32SMC	Environmental	Open in IMG/M
3300034008	Biocrust microbial communities from Mojave Desert, California, United States - 38SMC	Environmental	Open in IMG/M
3300034009	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 40SMS	Environmental	Open in IMG/M
3300034024	Biocrust microbial communities from Mojave Desert, California, United States - 23HNC	Environmental	Open in IMG/M
3300034026	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 42SMS	Environmental	Open in IMG/M
3300034132	Biocrust microbial communities from Mojave Desert, California, United States - 11HMC	Environmental	Open in IMG/M
3300034135	Biocrust microbial communities from Mojave Desert, California, United States - 25HNC	Environmental	Open in IMG/M
3300034136	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 29HNS	Environmental	Open in IMG/M
3300034221	Biocrust microbial communities from Mojave Desert, California, United States - 33SMC	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M
3300034376	Biocrust microbial communities from Mojave Desert, California, United States - 19HNC	Environmental	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M
3300034391	Biocrust microbial communities from Mojave Desert, California, United States - 13HMC	Environmental	Open in IMG/M
3300034392	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 8HMS	Environmental	Open in IMG/M
3300034402	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 56SNS	Environmental	Open in IMG/M
3300034687	Soil microbial communities from Mojave Desert, California, United States - 1NOC	Environmental	Open in IMG/M
3300034781	Biocrust microbial communities from Mojave Desert, California, United States - 31SMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25387J43893_10389392	3300002915	Grasslands Soil	VWDRKRQIIWLTVGFAGGTFFLYPIARDDAGRFDWQYFLQLETLLFVIIAVMFYIYSRRD
JGI25406J46586_100316342	3300003203	Tabebuia Heterophylla Rhizosphere	MWDRKRQIIWLGVGILFGTFSLAPIARDDAGRFDWQYFLQLETLLLLIIAVMFYIYSRKQ
Ga0058689_100452221	3300004016	Agave	MWDRKRQLIWLGVGLLFGTFSLYPLARDESGRTDWQYFLQLEALLALVICVMFFIYSRKP
Ga0066671_100266504	3300005184	Soil	MWDRKRQIIWLTVGLLFGTFSLYPIARDDAGRFDWQYFLQLETLLLVIIGVMFFVYSRRQ
Ga0066671_101803032	3300005184	Soil	VWDRKRQIIWLTVGFAGGTFFLYPIARDDAGRFDLQYFLQLETLLLVII
Ga0070673_1017788621	3300005364	Switchgrass Rhizosphere	MWDRKRQLIWLGVGLLFGTFSLYPLARDDAGRTDWQYFLQLEVLPVLVICIMFFIYSRKK
Ga0058697_106481991	3300005562	Agave	MWDRKRQIIWLTVGLFLGTFWLYPLARDDAGRTDWQYFLQLEALLVLVVAVMFYFYGRKK
Ga0066702_106986931	3300005575	Soil	IAVWDRKRQIIWLTVGLLFGTFSLYPIARDDAGRFDWQYFLQLETLLLVIIAVMFYIYSRRKP*
Ga0066654_108993692	3300005587	Soil	RKRQIIWLTVGLLFGTFSLYPIARDDAGRFDLQYFLQLETLLVAVIGVLFYIYSRKK*
Ga0070740_1000061950	3300005607	Surface Soil	MFLTPDFRLQTFKAVWDRKRQIIWLTVGFACGTFFLYPIARDDAGRFDLQYFLELETLLVVVIAVMFFIYSRRR*
Ga0066660_106375181	3300006800	Soil	VWDRKRQIIWLTVGLLFGTFSLYPIARDDAGRFDWQYFLQLETLLLVIIAVMFYIYSRRKP*
Ga0079217_112263502	3300006876	Agricultural Soil	ARMWDRKRQLIWLAAGLLLGTFWLYPLARDDAGQTDWQYFAQLEALLVLVICVMFYFYSRKK*
Ga0079215_102369942	3300006894	Agricultural Soil	VWDRKRQLIWLGVGLLFGTFSLYPLARDDAGRTDWQYFLQLETLLLLVVCVMFYVYGRKK
Ga0079215_111790671	3300006894	Agricultural Soil	MWDRKRQIIWLGVGLLFGTFSLYPIARDDAGRFDLQYFLQLEVLLILVICVMFYVYGRKA
Ga0105679_108862173	3300007790	Soil	MWDAKRQVIWLCGGLLFGTFALYPIARDDAGRFDLQYFLQLETLLLIIICVMFFIYSRKK
Ga0105679_110235944	3300007790	Soil	VWDTKRQIIWLCGGLLFGTFALYPIARDDAGRFDLPYFLQLETLLLIIICVMFFIYSRKK
Ga0126307_110483472	3300009789	Serpentine Soil	MWDRKRQLIWLGAGLLFGTFSLYPLALDDAGRADWQYFLQLEALLVLIICVMFYVYGRKK
Ga0126313_110126102	3300009840	Serpentine Soil	MWDRKRQLIWLGVGLLFGTFSLYPLAREESGRTDWQYFLQLEALLLLIICVMFFIYSRKS
Ga0126309_105634912	3300010039	Serpentine Soil	MWDRKRQIIWLGTGLLFGTFSLYPIARDDAGRFDPQYFAQLEVLLLLIICVMFYFYSRKK
Ga0126308_102877762	3300010040	Serpentine Soil	MWDRKRQLIWLGVGLLFGTFSLYPLARDDAGRADWQYFFQLEALLVLVICVMFFIYSRKK
Ga0126311_106123761	3300010045	Serpentine Soil	MWDRKRQLIWLGVGLLFGTFSLYPLALDDAGRADWQYFLQLEALLVLVICVMFFIYSRKQ
Ga0126311_113382712	3300010045	Serpentine Soil	MWDRKRQLIWLAVGLLFGTFSLYPIARDDAGRFDLQYFLQLEVLLIVIICVMFYVYGRKSREP*
Ga0126306_101603282	3300010166	Serpentine Soil	MWDSKRQTIWLVGGFLFGTFALYPIARDDAGRFDLQYFLQLETLLLIIICVMFFIYSRKG
Ga0126306_104490302	3300010166	Serpentine Soil	MWDRKRQLIWLGVGLLFGTFSLYPLALDDAGRADWQYFFQLEALLVLVICVMFYIYGRKK
Ga0126306_106251411	3300010166	Serpentine Soil	MWDRKRQVIWLLTGVVFGTFFLYPLARDESGRFDWEYFLQLEALLVVVIGV
Ga0126306_114278311	3300010166	Serpentine Soil	RTRMWDRKRQIIWLGVGLLFGTFSLYPLARDDAGRTDWQYFIQLEALLALVICVMFFVYGRKQ*
Ga0134067_101992712	3300010321	Grasslands Soil	VWDRKRQIIWLTVGFAGGTFFLYPIARDEAGRFDLQYFLQLETLLLVIIAVMFYIYSRRKP*
Ga0120191_100583041	3300012022	Terrestrial	MWDRKRQLIWLGVGLLFGTFSLYPLAVDDAGRTDWQYFLQLEALLALVICVMFFVYSRKS
Ga0136632_100209722	3300012093	Polar Desert Sand	MWDRKRQIIWLAAGLAFGSFFLYPLAYDDAGLFDLQYFFQLEALLVLVMAVMFYIYSRK*
Ga0136632_101932931	3300012093	Polar Desert Sand	MWDTKRQIIWLATAVTLGTFFLYPLARDEDGQTDWSYFAQLEVLLLLVIAVMFYLYSRKADM*
Ga0136632_101978072	3300012093	Polar Desert Sand	MWDRKRQIIWLGVGLLFGTFSIAPLARDEAGRFDWQYFLQLETLLVFIVAVMFYIYSRNK
Ga0182000_101617382	3300014487	Soil	MWDRKRQIIWLTVGLLFGTFSIYPIARDDAGRFDWGYFLQLETLLVVIIGVLSYIYSRKH
Ga0182000_106609791	3300014487	Soil	MWDRKRQLIWLGVGLLFGTFSLYPLARDEAGRTDWQYFLQLETLLILVICVMFYIYSRKQ
Ga0182001_100784392	3300014488	Soil	MWDRKRQIIWLTVGLLFGTFSLYPIARDDAGRFDWQYFLQLETLLVVIVGVMFFIYGRKSEK*
Ga0182001_102586921	3300014488	Soil	MWDAKRQIIWLTTGLAFGTVFLYPLARDEAGQTDWAYFAQLEVLLVLVIVVMFYIYGRKAK*
Ga0182001_103443272	3300014488	Soil	MWDRKRQIIWLTAGLCLGTFWLYPLARDDSGRADWQYFLQLEALLVLVVAVMFYVYGRKK
Ga0182001_104571212	3300014488	Soil	MWDRKRQIIWLAVGLCLGTFWLYPLARDDSGRTDWQYFLQLEALLVLVIAVMFYVYGRKK
Ga0183260_100988713	3300017787	Polar Desert Sand	MWDTKRQIIWLATAVTLGTFFLYPLARDEDGQTDWSYFAQLEVLLLLVIAVMFYLYSRKADM
Ga0136617_109995892	3300017789	Polar Desert Sand	MWDRKRQIIWLAAGLAFGSFFLYPLAYDDAGLFDLQYFLQLEALLVLVMAVMFYIYSRK
Ga0136617_112935622	3300017789	Polar Desert Sand	MWDTKRQIIWLATAVTLGTFFLYPLARDEDGQTDWSYFAQLEVLLLLVIAVMFYLYSRKADR
Ga0190266_105552142	3300017965	Soil	MWDRKRQLIWLGVGLLFGTFSLYPLALDDAGRADWQYFLQLEALLVLIICVMFFIYNRKP
Ga0190269_112970351	3300018465	Soil	VWDRKRQLIWLGVGLLFGTFSLYPLALDDAGRPDWQYFLQLEALLVLIICVMFYIYGRKK
Ga0190268_107388382	3300018466	Soil	MWDRKRQIIWLAVGLLFGTFSLYPLAVDDAGRTDWQYFVQLEALLALVICVMCFIYSRRR
Ga0066662_102000413	3300018468	Grasslands Soil	TVHGLRKGFIAVWDRKRQIIWLTVGLLFGTFSLYPIARDDAGRFDWQYFLQLETLLLVIIAVMFYIYSRRKP
Ga0066662_104816652	3300018468	Grasslands Soil	VWDRKRQIIWLTVGLAGGTFFLYPIARDEAGRFDLQYFLQLETLLLVIIGVMFYVYSWKK
Ga0190273_100449632	3300018920	Soil	MWDRKRQLIWLGVGLLFGTFSLYPLALDDAGRADWQYFLQLEALLVLIICVMFYIYGRKK
Ga0190273_100674792	3300018920	Soil	MWDTKRQIIWLTTGLAFGTVFLYPLARDEAGRTDWAYFAQLEVLLVVVVVVMFYIYGRKK
Ga0190273_106362021	3300018920	Soil	MWDGKRQTIWLVGGFLFGTFALYPIARDDAGRFDLQYFLQLETLLLIIICVMFFIYSRKS
Ga0190264_105494721	3300019377	Soil	MWDRKRQIIWLLTGVVFGTFFLYPLAREESGRFDWQYFLQLEALLVIVIAV
Ga0190264_111325431	3300019377	Soil	MWDRKRQLVWLGVGLLFGTFSLYPLALDESGRADWRYFFQLEALLVLVICVMFFVYSRKT
Ga0190264_122089402	3300019377	Soil	VWDTKRQIIWLTAGLAFGTVFLYPLARDEAGQTDWAYFAQLEVLLAAVVVVMFYIYGRKK
Ga0187893_103006651	3300019487	Microbial Mat On Rocks	MWDRKRQLIWLLTGLAFGSFFLYPLAREESGQFDWQYFLQLEALLVVVIGVMFYLYSRRN
Ga0190267_110528012	3300019767	Soil	MWDTKRQIIWLATAVILGTFFIYPLARDEDGQTDWSYFAQLETLLLAVIAVMFYLYSRKGDQA
Ga0190267_114633882	3300019767	Soil	MWDRKRQLIWLGVGLLFGTFSLYPLARDDAGRTDWQYFLQLEALLALVICVMFFIYSRKK
Ga0196977_100018021	3300020146	Soil	MWDRKRQMIWVATGLVFGTFFLYPLALDEPSGQLDWQYFLQLEALLVLVISVMFFIYGRK
Ga0196977_10093993	3300020146	Soil	MWDRKRQLIWLGVGLLFGTFSLYPLAVDDAGRADWQYFLQLEALLVLVICVMFFVYGRKS
Ga0196977_10489083	3300020146	Soil	VWDRKRQIIWLGTGLVFGSFFLYPLARDEQTGQLDWQYFLQLETILVIVIAVMFYVYSRK
Ga0196964_100672881	3300020202	Soil	MWDAKRQIIWLAAGLLFGSFFLYPLARDEAGQTDWAYFAQLELLLVVVI
Ga0196964_103662191	3300020202	Soil	QIIWLAAGLLFGSFFLYPLARDEAGQTDWTYFAQLEFLLVIVIGVMFYIYSRQGRG
Ga0196964_103891662	3300020202	Soil	VWDTKRQIIWLTTGLAFGTVFLYPLARDEAGQTDWAYFAQLEALLLIVVVVMFYIYGRKK
Ga0196963_100287802	3300020215	Soil	VWDRKRQIIWLGTGLIFGSFFLYPLARDENTGQFDWQYFLQLEAILVLIISVMFYIYGRK
Ga0196963_101023141	3300020215	Soil	MVWDAKRQFIWLAVGLAFGSLFLYPLARDDSGAADWAYFAQLELLLVAVMAVMFYLYGRR
Ga0196963_101063132	3300020215	Soil	MWDRKRQIIWLATGLVFGSFFLYPLARDESSGSFDWQYFLQLEALLVLVISVMFYVYGRK
Ga0196963_101654292	3300020215	Soil	MWDRKRQLIWLGVGLLSGSFFLYPLARDEAGLTDWQYFLQLETLLVIVIAVMFYVYSKRP
Ga0196963_103022502	3300020215	Soil	MWDRKRQIIWLGAGLVFGTFFLYPLALDEGTGRLDWQYFLQLETLLVVIIGVMFYVYSRK
Ga0196963_105183612	3300020215	Soil	MWDAKRQIIWLAAGLLFGSFFLYPLARDEAGQTDWTYFAQLEFLLVIVIGVMFYIYSRQGRG
Ga0196973_10077593	3300021061	Soil	MWDRKRQIIWLGAGLVFGTFFLYPLALDEGTGRLDWQYFLQLETLLITIIGVMFYVYSRK
Ga0196980_10890212	3300021066	Soil	MWDRKRQIIWLLTGVVFGTFFLYPLAREDSGRFDWQYFLQLEALLVVVIAVMFYIYSRRN
Ga0213906_1014672	3300021265	Soil	MWDRKRQIIWLTVGLCLGTFWLYPLARDDAGRADWQYFLQLESLLVVIVAVLFYFYSRKK
Ga0213876_10000052116	3300021384	Plant Roots	MWDRKRQLIWLGVGLLFGTFSLYPLARDEAGRTDWQYFLQLETLLVLIIGVMFFIYSRKK
Ga0213876_101206863	3300021384	Plant Roots	MWDRKRQLIWLGVGLLFGTFSLYPLARDDAGRTDWQYFIQLEALLVLVICVMFFIYSRKQ
Ga0196962_101969342	3300024430	Soil	MWDRKRQIIWLATGLVFGSFFLYPLARDENSGEFDWQYFLQLEALLILVIS
Ga0207662_111160762	3300025918	Switchgrass Rhizosphere	MWDRKRQLIWLGVGLLFGTFSLYPLARDDTGHTDWQYFFQLEALLVLIICVMFFIYSRKK
Ga0207709_110260111	3300025935	Miscanthus Rhizosphere	RKRQLIWLGVGLLFGTFSLYPLARDDAGRTDWQYFLQLEALLVLVICIMFFIYNRKP
Ga0207711_115720161	3300025941	Switchgrass Rhizosphere	MWDRKRQLIWLGFGLLFGTFSLYPLAREESGRTDWPYFFQLEALLLLVICVMFFIYSRKK
Ga0207698_125448202	3300026142	Corn Rhizosphere	MWDRKRQLIWLGVGLLFGTFSLYPLARDDTGRTDWQYFFQLEALLALIICVMFFIYSRKR
Ga0209027_10120264	3300026300	Grasslands Soil	VWDRKRQIIWLTVGFAGGTFFLYPLARDDAGRLDLQYFLQLETLLLVIIAVMFYIYSRKK
Ga0209027_10147232	3300026300	Grasslands Soil	VWDRKRQIIWLTVGFAGGTFFLYPIARDDAGRFDWQYFLQLETLLLVIIAVMFYIYRRKP
Ga0209153_11376272	3300026312	Soil	FTKGFAVVWDRKRQIIWLTVGLLFGTFSLYPIARDDAGRFDLQYFLQLETLLVAVIGVLFYIYSRKK
Ga0209153_11737602	3300026312	Soil	VWDRKRQIIWLTVGFAGGTFFLYPIARDDAGRFDLQYFLQLETLLLVIIAVMFYIYSRRK
Ga0209153_12238081	3300026312	Soil	VWDRKRQIIWLTVGLAGGTFFLYPIARDEAGRFDLQYFLQLETLLLVIIGV
Ga0209059_10912642	3300026527	Soil	VWDRKRQIIWLTVGLLFGTFSLYPIARDDAGRFDWQYFLQLETLLLVIIAVMFYIYSRRK
Ga0209577_100811114	3300026552	Soil	RHKTVWDRKRQIIWLTVGLAGGTFFLYPIARDEAGRFDLQYFLQLETLLLVIIGVMFYVYSWKK
Ga0209577_104909252	3300026552	Soil	VWDRKRQIIWLTVGFAGGTFFLYPIARDDAGRFDLQYFLQLETLLLVIIAVMFYIYSRK
Ga0209581_10011135	3300027706	Surface Soil	MFLTPDFRLQTFKAVWDRKRQIIWLTVGFACGTFFLYPIARDDAGRFDLQYFLELETLLVVVIAVMFFIYSRRR
Ga0209461_101650242	3300027750	Agave	DRKRQVIWLATGLVFGSFFLYPLALDETTGRTDWPYFFQLEALLVLVISVMFYVYGRGER
Ga0209574_101212572	3300027809	Agave	MWDTKRQIIWLCGGLLFGTFALYPIARDDAGRFDLQYFLQLETLLLIIICVMFFIYSRKK
Ga0272482_100020134	3300028578	Soil	VWDRKRQIIWLATGLIFGTFFLYPLAHDDAGRFDWAYFLQLEALLAIVVSVMFYIYSRKQ
Ga0307300_103351852	3300028880	Soil	MWDRKRQLIWLGVGLLFGTFSLYPLARDDAGRTDWEYFLQLEALLALVICVMFFVYSRKK
Ga0268242_10174382	3300030513	Soil	VWDAKRQIIWLTTGLAFGTVFLYPLARDEAGQTDWAYFAQLEVLLVLVIVVMFYIYGRKA
Ga0268253_101148821	3300030514	Agave	MWDRKRQLIWLGVGLLFGTFSLYPLARDDAGRTDWQYFLQLEALLALVIGVMFFVYSR
Ga0268254_101749911	3300030515	Agave	MWDRKRQIIWLTVGLLFGTFSLYPIARDDAGRFDWQYFLQLETLLVVIVGVMFFVYSRKSDKR
Ga0307410_113572491	3300031852	Rhizosphere	MWDRKRQLIWLGVGLLFGTFSLYPLARDDAGRTDWQYFLQLEALLVLVICVMFFIYGRKK
Ga0307409_1028499042	3300031995	Rhizosphere	MWDRKRQLIWLGVGLLFGTFSLYPLARDDAGRTDWQYFLQLEALLVLIICVMFYVYGRKQ
Ga0307415_1007850981	3300032126	Rhizosphere	MWDRKRQIVCLAVGVLFGTFSLYPLARDESGRTDWQYFFQLETLLLVIIAVMFYVYSR
Ga0334909_007636_1190_1372	3300033988	Soil	MWDTKRQIIWLTTGVLLGTFFLYPLARDEVGLTDWSYFAQLELLLLAVIGVMFYVYSKKR
Ga0334930_013558_1064_1228	3300034005	Sub-Biocrust Soil	QIIWLAVGLLFGTFSLYPIARDDDGRFDPQYFAQLEVLLVIVVCVMFYVYSRKQ
Ga0334934_008030_278_460	3300034006	Biocrust	MWDRKRQLIWLGVGLLFGTFSLYPLARDDAGRTDWQYFLQLEAILLLIICVMFYLYGRKQ
Ga0334936_014912_1471_1653	3300034007	Biocrust	MWDRKRQLIWLVVGLLFGTFSLYPLARDDAGRTDWQYFIQLEALLALVICVMFYLYGRKK
Ga0334942_022675_614_796	3300034008	Biocrust	MWDRKRQLIWLGVGLLFGTFSLYPLARDDSGRTDWQYFIQLEALLALVICVMFFVYGRKQ
Ga0334944_027867_41_223	3300034009	Sub-Biocrust Soil	MWDRKRQLIWLAAGLVLGTFWLYPLARDDAGRTDWQYFLQLETLLVAVIAVMFYFYGRKS
Ga0334944_070332_381_563	3300034009	Sub-Biocrust Soil	MWDRKRQIIWLTVGLCLGTFWLYPLARDDAGRTDWQYFFQLEALLVLVVAVMFYFYSRKR
Ga0334927_033101_266_448	3300034024	Hypolithic Biocrust	MWDRKRQLIWLGVGLLFGTFSLYPLALDDAGRADWQYFLQLEALLVLIICVMFFVYTRKQ
Ga0334946_000016_203773_203955	3300034026	Sub-Biocrust Soil	MWDRKRQIIWLAVGLLFGTFSLYPVARDDAGRFDPQYFAQLEVLLVVVICVMFYFYSRKP
Ga0334946_000882_3833_4015	3300034026	Sub-Biocrust Soil	MWDRKRQIIWLGGGLLFGTFSLYPIARDDAGRFDLQYFLQLETLLVIIICVMFFIYSRKG
Ga0334946_010754_1174_1356	3300034026	Sub-Biocrust Soil	MWDRKRQLIWLASGLVLGTFWLYPLARDDAGRTDWQYFLQLETLLVAVIAVMFYLYGRKQ
Ga0334946_033353_22_207	3300034026	Sub-Biocrust Soil	MWDRKRQIIWLATGLVFGTFFLYPLARDDASGRFDWPYFFMLEALLVVIISVMFYIYGRK
Ga0334915_128760_335_517	3300034132	Hypolithic Biocrust	MWDRKRQLIWLGVGLLFGTFSLYPLALDDAGRADWQYFLQLEALLVLIICVMFYLYGRKN
Ga0334929_001557_3315_3506	3300034135	Hypolithic Biocrust	MWDTKRQIIWLATAVTLGTFFIYPLARDDDGQIDWPYFAQLEVLLLAVIAVMFYLYSRNGDKA
Ga0334933_082459_98_280	3300034136	Sub-Biocrust Soil	MWDRKRQLIWLGVGLLFGTFSLYPLALDDAGRPDWQYFLQLEALLVLIICVMFYVYGRKQ
Ga0334937_215101_369_530	3300034221	Biocrust	MWDRKRQIIWLAVGLLFGTFSLYPVARDDAGRFDPQYFAQLEVLLVVVICVMFY
Ga0372943_0168971_625_810	3300034268	Soil	MWDRKRQIIWLTVGVLFGTFSLYPIARDDAGRFDRQYFLQLETLLLLIIVVMFYVYGRRK
Ga0334923_007099_1979_2161	3300034376	Hypolithic Biocrust	MWDRKRQIIWLAVGLLFGTFSLYPIARDDAGRFDLQYFLQLEALLVIIICIMFLVYSRKA
Ga0334923_041749_712_894	3300034376	Hypolithic Biocrust	MWDRKRQLIWLGVGLLFGSFFLYPLARDEAGITDWQYFLQLETLLALIICVMFFIYSRKK
Ga0334931_000041_33814_33996	3300034377	Sub-Biocrust Soil	MWDRKRQLIWLGVGLLFGTFSLYPLARDDAGRTDWQYFLQLEALLVLVICVMFYVYGRKR
Ga0334931_034977_557_739	3300034377	Sub-Biocrust Soil	MWDTKRQIIWLCGGLLFGTFALYPIARDDAGRFDLRYFLQLETLLLIIICVMFFIYSRKK
Ga0334917_014138_1031_1213	3300034391	Hypolithic Biocrust	MWDRKRQVTWLAVGLVFGTFSLYPLARDDAGLTDWQYFLQLETLLVIIIAVMFYVYGRKQ
Ga0334917_015513_341_523	3300034391	Hypolithic Biocrust	MWDTKRQIIWLVTSVVLGTFFLYPLGRDETGEFDWKYFAQLEALLLIIITAMFYFYSRKK
Ga0334912_002028_558_743	3300034392	Sub-Biocrust Soil	VWDTKRQLIWLAGGSVFGTFFLYPLARDDSGKPDWAYFAQLELLLIIVITVMFYIYSRRK
Ga0334960_000720_11717_11905	3300034402	Sub-Biocrust Soil	MWDAKRQIIWVATGLLFGSFFLYPLARDEAGQTDWAYFAQLELLLVIVIAVMFYIYSRQSKN
Ga0334960_005311_1420_1629	3300034402	Sub-Biocrust Soil	VVGVEGLKAVWDRKRQIIWLVVGLLFGTFSLYPIARDEAGRTDWQYFLQLETLLVLIICVMFYFYSRKS
Ga0334905_009528_947_1129	3300034687	Soil	MWDRKRQLIWLAAGLVLGTFWLYPLARDEAGRTDWQYFLQLETLLLVIIGVMFFIYGRKK
Ga0334935_001668_2442_2624	3300034781	Biocrust	MWDRKRQLIWLGVGLLFGTFSLYPLARDDAGRTDWQYFLQLEALLLLIICVMFYLYGRKQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F069865

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences