Metagenome Family F069799

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069799
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	85 residues
Representative Sequence	WRHAAAEIEQYRRTYQITDPDRALGPEPHDPAQRAAQHRARSAIERVHAKQRATDRSRDAQPTSERPTQPRSHEQRGRPGPERAAG
Number of Associated Samples	59
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	4.88 %
% of genes near scaffold ends (potentially truncated)	96.75 %
% of genes from short scaffolds (< 2000 bps)	94.31 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (65.854 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere (34.959 % of family members)
Environment Ontology (ENVO)	Unclassified (34.959 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.276 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.11% β-sheet: 0.00% Coil/Unstructured: 57.89%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF08378	NERD	31.71
PF02371	Transposase_20	2.44
PF10081	Abhydrolase_9	0.81
PF01243	Putative_PNPOx	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	2.44

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
All Organisms	root	All Organisms	34.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
cellular organisms	root	All Organisms → cellular organisms	34.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	34.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	34.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	30.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	17.89 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3.25 %
Motilibacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales	0.81 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	17.89 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	1.63 %
Motilibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae	0.81 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.81 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.81 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3.25 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	1.63 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	0.81 %
Motilibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter	0.81 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.81 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	1.63 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	1.63 %
Motilibacter deserti	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	0.81 %
unclassified Blastococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus	0.81 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.81 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.85 %
Streptomyces sp. 891-h	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 891-h	1.63 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	1.63 %
Blastococcus sp. CT_GayMR16	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. CT_GayMR16	0.81 %
Motilibacter deserti	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	0.81 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.81 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003203\|JGI25406J46586_10242013	Not Available	529	Open in IMG/M
3300003373\|JGI25407J50210_10146676	Not Available	581	Open in IMG/M
3300005562\|Ga0058697_10030890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1950	Open in IMG/M
3300005562\|Ga0058697_10659252	Not Available	553	Open in IMG/M
3300005562\|Ga0058697_10682315	Not Available	545	Open in IMG/M
3300005981\|Ga0081538_10109824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 891-h	1357	Open in IMG/M
3300006844\|Ga0075428_102222377	Not Available	566	Open in IMG/M
3300006846\|Ga0075430_100550278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	952	Open in IMG/M
3300006853\|Ga0075420_100746948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	843	Open in IMG/M
3300006880\|Ga0075429_100674223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	906	Open in IMG/M
3300009094\|Ga0111539_10149777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter deserti	2731	Open in IMG/M
3300009156\|Ga0111538_10623027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1368	Open in IMG/M
3300009789\|Ga0126307_11036102	Not Available	663	Open in IMG/M
3300009789\|Ga0126307_11134577	Not Available	632	Open in IMG/M
3300009840\|Ga0126313_10158368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1715	Open in IMG/M
3300009840\|Ga0126313_11152222	Not Available	638	Open in IMG/M
3300009840\|Ga0126313_11179992	Not Available	630	Open in IMG/M
3300009840\|Ga0126313_11337403	Not Available	593	Open in IMG/M
3300009840\|Ga0126313_11414929	Not Available	576	Open in IMG/M
3300010036\|Ga0126305_10139161	Not Available	1500	Open in IMG/M
3300010036\|Ga0126305_10313993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1020	Open in IMG/M
3300010036\|Ga0126305_11184803	Not Available	527	Open in IMG/M
3300010037\|Ga0126304_10083043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2002	Open in IMG/M
3300010037\|Ga0126304_10938729	Not Available	589	Open in IMG/M
3300010038\|Ga0126315_10119617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1533	Open in IMG/M
3300010038\|Ga0126315_10180701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1263	Open in IMG/M
3300010038\|Ga0126315_10587882	Not Available	718	Open in IMG/M
3300010041\|Ga0126312_10336503	Not Available	1068	Open in IMG/M
3300010041\|Ga0126312_10648016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	761	Open in IMG/M
3300010042\|Ga0126314_10452225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	929	Open in IMG/M
3300010042\|Ga0126314_10479535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	901	Open in IMG/M
3300010042\|Ga0126314_10484187	Not Available	897	Open in IMG/M
3300010166\|Ga0126306_10262312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1321	Open in IMG/M
3300010166\|Ga0126306_10457934	Not Available	1004	Open in IMG/M
3300010166\|Ga0126306_11111371	Not Available	647	Open in IMG/M
3300010166\|Ga0126306_11697561	Not Available	527	Open in IMG/M
3300010329\|Ga0134111_10532905	Not Available	519	Open in IMG/M
3300014487\|Ga0182000_10512390	Not Available	560	Open in IMG/M
3300014488\|Ga0182001_10462852	Not Available	572	Open in IMG/M
3300018054\|Ga0184621_10175523	Not Available	770	Open in IMG/M
3300018067\|Ga0184611_1344925	Not Available	511	Open in IMG/M
3300018422\|Ga0190265_10830175	Not Available	1047	Open in IMG/M
3300018465\|Ga0190269_11584885	Not Available	545	Open in IMG/M
3300022694\|Ga0222623_10004487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4882	Open in IMG/M
3300022694\|Ga0222623_10430769	Not Available	500	Open in IMG/M
3300022756\|Ga0222622_11084442	Not Available	589	Open in IMG/M
3300027718\|Ga0209795_10054219	Not Available	1209	Open in IMG/M
3300027718\|Ga0209795_10072458	Not Available	1008	Open in IMG/M
3300027873\|Ga0209814_10299814	Not Available	700	Open in IMG/M
3300028705\|Ga0307276_10038150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1026	Open in IMG/M
3300028705\|Ga0307276_10065829	Not Available	829	Open in IMG/M
3300028711\|Ga0307293_10081651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1020	Open in IMG/M
3300028715\|Ga0307313_10097876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	890	Open in IMG/M
3300028715\|Ga0307313_10222190	Not Available	587	Open in IMG/M
3300028716\|Ga0307311_10049707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1113	Open in IMG/M
3300028717\|Ga0307298_10154551	Not Available	667	Open in IMG/M
3300028718\|Ga0307307_10210731	Not Available	616	Open in IMG/M
3300028719\|Ga0307301_10231796	Not Available	602	Open in IMG/M
3300028722\|Ga0307319_10057284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1227	Open in IMG/M
3300028722\|Ga0307319_10183164	Not Available	683	Open in IMG/M
3300028744\|Ga0307318_10065800	Not Available	1208	Open in IMG/M
3300028744\|Ga0307318_10154534	Not Available	788	Open in IMG/M
3300028744\|Ga0307318_10174765	Not Available	740	Open in IMG/M
3300028744\|Ga0307318_10293537	Not Available	569	Open in IMG/M
3300028744\|Ga0307318_10357996	Not Available	514	Open in IMG/M
3300028744\|Ga0307318_10360775	Not Available	512	Open in IMG/M
3300028771\|Ga0307320_10281086	Not Available	659	Open in IMG/M
3300028791\|Ga0307290_10274737	Not Available	617	Open in IMG/M
3300028796\|Ga0307287_10185489	Not Available	790	Open in IMG/M
3300028796\|Ga0307287_10229068	Not Available	704	Open in IMG/M
3300028811\|Ga0307292_10104948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1114	Open in IMG/M
3300028819\|Ga0307296_10649100	Not Available	577	Open in IMG/M
3300028828\|Ga0307312_10131286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1577	Open in IMG/M
3300028876\|Ga0307286_10062328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1278	Open in IMG/M
3300028876\|Ga0307286_10118776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	936	Open in IMG/M
3300028881\|Ga0307277_10455729	Not Available	573	Open in IMG/M
3300030336\|Ga0247826_11102532	Not Available	634	Open in IMG/M
3300030336\|Ga0247826_11787888	Not Available	503	Open in IMG/M
3300030514\|Ga0268253_10018515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1639	Open in IMG/M
3300030516\|Ga0268255_10127793	Not Available	753	Open in IMG/M
3300031548\|Ga0307408_102189088	Not Available	534	Open in IMG/M
3300031731\|Ga0307405_10618643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	886	Open in IMG/M
3300031731\|Ga0307405_11076146	Not Available	690	Open in IMG/M
3300031731\|Ga0307405_11104610	Not Available	682	Open in IMG/M
3300031852\|Ga0307410_10354540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1173	Open in IMG/M
3300031852\|Ga0307410_10846224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	781	Open in IMG/M
3300031852\|Ga0307410_10867798	Not Available	771	Open in IMG/M
3300031852\|Ga0307410_11960644	Not Available	522	Open in IMG/M
3300031901\|Ga0307406_10961167	Not Available	731	Open in IMG/M
3300031901\|Ga0307406_11738180	Not Available	553	Open in IMG/M
3300031901\|Ga0307406_11824485	Not Available	541	Open in IMG/M
3300031903\|Ga0307407_10426680	Not Available	957	Open in IMG/M
3300031903\|Ga0307407_11488397	Not Available	535	Open in IMG/M
3300031995\|Ga0307409_100144624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2054	Open in IMG/M
3300031995\|Ga0307409_100561419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1122	Open in IMG/M
3300031995\|Ga0307409_101205308	Not Available	780	Open in IMG/M
3300031995\|Ga0307409_101258345	Not Available	764	Open in IMG/M
3300031995\|Ga0307409_101577431	Not Available	684	Open in IMG/M
3300032002\|Ga0307416_100133779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2238	Open in IMG/M
3300032002\|Ga0307416_100134795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2231	Open in IMG/M
3300032002\|Ga0307416_100253522	Not Available	1714	Open in IMG/M
3300032002\|Ga0307416_100449342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1341	Open in IMG/M
3300032002\|Ga0307416_100462692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1324	Open in IMG/M
3300032002\|Ga0307416_101377032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 891-h	811	Open in IMG/M
3300032002\|Ga0307416_101813644	Not Available	714	Open in IMG/M
3300032002\|Ga0307416_102160284	Not Available	658	Open in IMG/M
3300032002\|Ga0307416_102660441	Not Available	597	Open in IMG/M
3300032002\|Ga0307416_103075072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	558	Open in IMG/M
3300032002\|Ga0307416_103386661	Not Available	533	Open in IMG/M
3300032002\|Ga0307416_103630972	Not Available	516	Open in IMG/M
3300032004\|Ga0307414_11194791	Not Available	704	Open in IMG/M
3300032004\|Ga0307414_11545776	Not Available	618	Open in IMG/M
3300032004\|Ga0307414_12267393	Not Available	507	Open in IMG/M
3300032005\|Ga0307411_10046381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2801	Open in IMG/M
3300032005\|Ga0307411_10381835	Not Available	1159	Open in IMG/M
3300032005\|Ga0307411_10989904	Not Available	752	Open in IMG/M
3300032005\|Ga0307411_12287971	Not Available	508	Open in IMG/M
3300032126\|Ga0307415_100227750	Not Available	1499	Open in IMG/M
3300032126\|Ga0307415_100316431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1299	Open in IMG/M
3300032126\|Ga0307415_100701405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	913	Open in IMG/M
3300032126\|Ga0307415_100885845	Not Available	821	Open in IMG/M
3300032126\|Ga0307415_101553679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. CT_GayMR16	634	Open in IMG/M
3300032126\|Ga0307415_102567049	Not Available	502	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	51.22%
Host-Associated	Host-Associated	48.78%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	48.78%
Terrestrial	Environmental → Terrestrial	47.15%
Aquatic	Environmental → Aquatic	4.06%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	40.65%
Phylloplane	Host-Associated → Plants → Phylloplane	5.69%
Sediment	Environmental → Aquatic → Sediment	4.06%
Roots	Host-Associated → Plants → Roots	1.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	40.65%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	5.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.06%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	40.65%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	5.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.06%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.63%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	1.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	34.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.58%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	19.51%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.69%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	5.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.44%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.63%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	1.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.81%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030514	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030516	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25406J46586_102420131	3300003203	Tabebuia Heterophylla Rhizosphere	AEIEQYRDDYGITDPDRALGLEPADRAQRAARQRAQTVIDRVQAKQRAPDLTVTRDARPTSERTTQPRSGEQRGRRGPERAAG*
JGI25407J50210_101466761	3300003373	Tabebuia Heterophylla Rhizosphere	AEIEQYRHSYGITDPDRGLGLEPADRAQRAARQRVGRAIDRVQAKQRAPDLTVTRDARPTSERTTQPRSGEQRGRRGPERAAG*
Ga0058697_100308902	3300005562	Agave	VPESTRGRRAWRQAAAEIEQYRHTYDITDPDRALGPEPADRAQRAARQRARMAIERVQAKQRPSDLTRDAWPTSERTTQPRPGEQRGRPGPERAAG*
Ga0058697_106592522	3300005562	Agave	STRGRRAWRQAAAQIEDYRHTYQITDPDRALGPEPHDPIQRADRQRARTAIERLHAKQRAADRIREVQPTSERPNQPRAHEQRGRCGPERAVG*
Ga0058697_106823152	3300005562	Agave	AWRQAAAEIEQYRRTYQITDPERALGPEPHDSGRRADRQRARTTIDRVQAKQRAADSSWERQPTSAPTNPPRPRAQRGRPGPERAAG*
Ga0081538_101098241	3300005981	Tabebuia Heterophylla Rhizosphere	EIEQYRHTYGITDPVRALGPEPADRAQWADRQRARTAIERVHGKQRAADRTHHRQLTSEHHQPRPGEHRGRRGPERAAG*
Ga0075428_1022223771	3300006844	Populus Rhizosphere	RHGAAQIEHYRRTYQITDSERALGPEPHDPAQRADRQRVRTAIERVHAKQRGTNRTRDIQPTSERTKPPRPHQQRGRPGPERAAG*
Ga0075430_1005502781	3300006846	Populus Rhizosphere	RSYQITDPERALGPEPHHPGQRADRQRAFTAIERVQAKQRATDRTHQRQPTSEPTTQPRLRQQRSRPGPERAAG*
Ga0075420_1007469482	3300006853	Populus Rhizosphere	EALGPVPASTRGRRVWRHAAAEIEHHRHTYGITDPVRALGPEPHDPTQRADRQQVRTAIDRVQAKQRAADHTYQRQPTSERTNQPRACEQRGRRGPERAAS*
Ga0075429_1006742232	3300006880	Populus Rhizosphere	VPASTRGRRAWCQAAAQLEDYRRSYQIPDPDRALGPEPRDPAQRADRQRVRTAIDRVRVKQRAADRTRDGQPTSERTSQHHRPQERRSWPGPERAAG*
Ga0111539_101497771	3300009094	Populus Rhizosphere	MEHYRRSYQITDPERALGPEPHNAPQRADRQRARTAIERVQAKQRAAERARDAQPSSRPPPHQQRGRPGPERAAG*
Ga0111538_106230271	3300009156	Populus Rhizosphere	ADRPGYVLEELGPVPESTRGRRAWRQAAAEIEQYRTSYGITDPVRAIGPEPADRVQWAARQRVRTAIGRVQAKQRAFNLTGDARPTSERTTQSRSSEQRGRRGPERAAG*
Ga0126307_110361022	3300009789	Serpentine Soil	RHTYHIADPDRALGPEPRDPAQRADRQRTHAAIERVQAKQRATDPSRDLQSTSEPISQPRPHQQRGRQGPERAAG*
Ga0126307_111345772	3300009789	Serpentine Soil	TRGKRAWRQAAAEIENYRRTYRITDPERALGPEPHDPTQRADRQRARTAIDRLRAKHRATDRSRDLQPTSEPSTQPRPRQECRHPGPERAAG*
Ga0126313_101583683	3300009840	Serpentine Soil	RRAWRQAAAEIEHYRHSYGITDPERALGPEPRDSTQRADHQRARTSIDRVQAKQRAADRTRDAQPTSERLTQPRSYEQRGPERVAG*
Ga0126313_111522221	3300009840	Serpentine Soil	VPESTRGRRAWRQAAAQIEDYRRSYEITDPDRALGLEPRDPTQREARQRARTAIGRVHGKQRAADRTCDLQSTSQPNSTPRTRDQAAPPDRRDPERAAG*
Ga0126313_111799922	3300009840	Serpentine Soil	ARGRRAWRQAAAEIEHYRRTYRITDPERALGPEPHDPAQRVDRQRARTAIERVQVKQRAADRIRDVQSTSDSANQPRAREQRRRGPERAAG*
Ga0126313_113374032	3300009840	Serpentine Soil	RTYQITDPKRALGPDPHDPAQRADRQRARTAIERVHAKQRAADRTRDFQPTSERPTQPRPRLQRGQRGSERVAG*
Ga0126313_114149291	3300009840	Serpentine Soil	VLEALGPVPASTRGRRAWRQAAGQLEHYRHTYHITDSEWALGPESRDPAQRADRQRVRTAMEWVQAKQRATDRLRDLQPTAERTNQHRPQERRSRPGPERAAG*
Ga0126305_101391612	3300010036	Serpentine Soil	VPASTRGRRAWRHAAADIEHYRNSYHITDPDRALGPEPHDPTQRADRQGVRTAIERVHSKQRATDRTQQRQPTSKHTRQPRPGEQRGRPGPERAAG*
Ga0126305_103139933	3300010036	Serpentine Soil	EADRPGYVLEAPGPVPESTRGRRAWRQAAAEVEQYRRSYQVTDPDRALGPEPHNPAQRADRQRVRLAIALVQSKQRAADRSRDAQLTSERPNQPRPHQQRDRSGPERAAG*
Ga0126305_111848031	3300010036	Serpentine Soil	EEYRRTYQITDPKRALGPDPHDPAQRADRQRARTAIERVHAKQRAADRTRDFQPTSERPTQPRPRLQRGQRGSERVAG*
Ga0126304_100830431	3300010037	Serpentine Soil	VPESTRGRRAWRQAAAEIEDYRRSYDIIDPDRALGPEPRDPGQRADRQRARTAIDRVQAKQRVADRTRDPQPPSERPSQPRPHQQ
Ga0126304_109387291	3300010037	Serpentine Soil	QYRRSYHITDPERALGPEPQDPAQRADHQRARMAIERVHTKQHTTNRTHERQPTNEHTTQPRPRRPLGRQGPERAAG*
Ga0126315_101196172	3300010038	Serpentine Soil	RHTYQITDPDRALGPEPHGPAQRADRQRARTAIARVQAKQRATDRSRDTQPTSERTNQPRPREHHGRPGPERAAS*
Ga0126315_101807011	3300010038	Serpentine Soil	IEQYRRSYQITDPARALGPEPHDPAQRADRQRARTTIDRVHAKQWAADRTYDRQPTSERPSQPRLREQRGRRGPERAAG*
Ga0126315_105878821	3300010038	Serpentine Soil	RAWRHAAAEIEQYRRTYQITDPDRALGPEPHDPGQRADRQRARTAIDRVQATQRTTDRTHERQPPSERPSQPRPHQQRGRSGPERAAG*
Ga0126312_103365031	3300010041	Serpentine Soil	RGRRAWRQAAAEIEQYRRTYQITQPDRALGPEPHDRSQRADRQRARSAIARVHAKQRADDRTRDTQPTSERPTQPRPHHQRSWRGPERAAG*
Ga0126312_106480162	3300010041	Serpentine Soil	YRHTYQITNPEQALGPEPRDPGQRADRQRARTAIARVHTKQRTTDRTHERQPTSERTSQPRPRQPLGRQGPERAAG*
Ga0126314_104522252	3300010042	Serpentine Soil	HAAAQIEHYRRSYQITDPDRALGPEPHDQTQRADRQHARTVIERIHAKQRATDRTRDTQPTSEPTTQPRPHQQRGRPGPERAAG*
Ga0126314_104795352	3300010042	Serpentine Soil	RRAWRQATAEIEHYRHTYGITDPDRALGPEPADRAQRAARQRVGTAIERVQARQRAADRSHQRQPTSEHTSQPRPKEQRGRPGPERAAG*
Ga0126314_104841872	3300010042	Serpentine Soil	VDVDRPGYVLEALGPVPASTRGRRAWRQAAAQLEHYRHTYHITDSEWALGPESRDPAQRADRQRVRTAMEWVQAKQRATDRLRDLQPTAERTNQHRPQERRSRPGPERAAG*
Ga0126306_102623121	3300010166	Serpentine Soil	YRRSYQITDPERALGSEPHDPVQRAARQRARTAIDRVHAKQRAADRTQDTQPMSERHIQPRPPEPRGRPGPERAAG*
Ga0126306_104579342	3300010166	Serpentine Soil	EQYRHTYHITDPDRALGPEPRDPAQRADRQRTHAAIERVQAKQRATDPSRDLQSTSEPTSQPRPHQQRGRQGPERAAG*
Ga0126306_111113712	3300010166	Serpentine Soil	WRQAAAEIEHYRHTYGINDPDWALGPEPHNRVQRADRQRARTAIDRLQAKQRATDRTHDRQLTSDHHQPRPHRQRGRPGPERAAG*
Ga0126306_116975612	3300010166	Serpentine Soil	RRTYRITDPDRALGPEPRDSAQRADRQRVRGAIDRVQAKQRSTDRSCDVEPTAERTNQHRPQERRSRQGPERAAG*
Ga0134111_105329052	3300010329	Grasslands Soil	RRFVFAYFEGGWDHVHGPDPRDPAQRVDRQRARTAIERVQAKQRAADRSRDAQPTSERPIQPRPREQRGRPGPERAAG*
Ga0182000_105123902	3300014487	Soil	YHITDPDRALGAEPDDVTQRTARQRVRSAIERVLAKQPAADRSHDRQPTSERPSQPRSRGHRSRHGPERAAG*
Ga0182001_104628522	3300014488	Soil	RRAWRQAAAEIEQYRRTYQITDPDRALGPEPHDPAQRAARQRTRSAIERVQAKQRAADRTRDAQPTSERSTQPRPHQQRGRPDPERVAG*
Ga0184621_101755231	3300018054	Groundwater Sediment	QIEDYRHTYQITDPDHALGSEPRDPAQRVDRQRARSTIARIHGKQRAADRTHERQATSERLNQPRPHQQRGRPGPERAAG
Ga0184611_13449251	3300018067	Groundwater Sediment	RTWRQAAAEIEHYRRTYQITDPDRALGPEPHDPAQRAAQHRARSAIERVHGKQRATDRTHLRQPTSEPTTQPRLRQQRGWPGPERAAG
Ga0190265_108301751	3300018422	Soil	HYRRTYQITDPERALGPEPHSPDQRADRQRTRTAIERIRAKQRATDRSRDPQPTSERPLQPRPHEQRGRHGPERAAG
Ga0190269_115848851	3300018465	Soil	RAWRHAAAEIEQYRRTYQITDPDHALGPEPHDPAQRADRQRARTTIEQLHTKQRATERTRDPQPPSERPSQPRPHRQRGRPGPERAAG
Ga0222623_100044876	3300022694	Groundwater Sediment	AEIEHYRRSYQITDPERALGPDPAGPAQRADRPRVRTAIERVHVKQRATDRARDIEPTSERPSQPRPHERRGRSGPERAAG
Ga0222623_104307691	3300022694	Groundwater Sediment	YRHTYQITDPERALGPEPHDPAQRADRQRTRTAIERVQAKQHAADRTRDPRSTIEPRSRQQRGRPGPERAAG
Ga0222622_110844421	3300022756	Groundwater Sediment	WRHAAAEIEQYRRTYQITDPDRALGPEPHDPAQRAAQHRARSAIERVHAKQRAADRTRDTQPTSERPNQPRPHQQCGRPGPERAAG
Ga0209795_100542191	3300027718	Agave	VPESTRGRRAWRQAAAEIEQYRHTYDITDPDRALGPEPADRAQRAARQRARMAIERVQAKQRPSDLTRDAWPTSERTTQPRPGEQRGRPGPERAAG
Ga0209795_100724582	3300027718	Agave	YQITDPDRALGPEPRDLTQRADRQRARSAIERVQAKQRASDLTRDAQPTSERTTRPRSGEQRGPERAAG
Ga0209814_102998142	3300027873	Populus Rhizosphere	IEQYRRTYQITDPDHALGPEPHDPAQRADRQRARTTIDRVQAKQRVAEHTRDPQPPSERPSQPRPHQQRGRPGPERAAG
Ga0307276_100381502	3300028705	Soil	GPVPESTRGRRAWRQGAAEIEHYRHTYGITDPVRALGPEPADRAQQADRQQARAAIARVHAKQRAADRTQQPQPTSEHTSQPRPKEHHGRPGPERAAG
Ga0307276_100658291	3300028705	Soil	QEALGPVPESTRGRRAWRHAAVQIEDYRRTYHITNPDRALGAEPNNLTQRADRQRADSAIKQVQTKQRGADRSHDTQPTSEPANQPRPRTQRGRHGPERAAG
Ga0307293_100816511	3300028711	Soil	WHQAAAEIEQYRRAYHISDPERALGPEPHNPTQRADRQRVRTAIERVQARQRATDRTRDTEPTSDRPTQPRPHEPRGRHGPERAAG
Ga0307313_100978761	3300028715	Soil	QYRYTYDITDPDRALGSEPHDPAQRAGRQRARTTIDLIQTRERAADRTHQPQSTSEPPTEPRPRQQHGRPGPERAAG
Ga0307313_102221901	3300028715	Soil	WRHAAAEIEQYRRTYQITDPDRALGPEPHDPAQRAAQHRARSAIERVHAKQRATDRSRDAQPTSERPTQPRSHEQRGRPGPERAAG
Ga0307311_100497071	3300028716	Soil	HAAVQIEDYRRTYHITNPDRALGAEPNNLTQRADRQRADSAIKQVQTKQRGADRSHDTQPTSEPANQPRPRTQRGRHGPERAAG
Ga0307298_101545512	3300028717	Soil	QAAAEIEQYRRAYHISDPERALGPEPHNPTQRADRQRVRTAIERVQARQRATDRTRDTEPTSDRPTQPRPHEPRGRHGPERAAG
Ga0307307_102107311	3300028718	Soil	RALGSEPHDPAQRAGRQRARTTIDLIQTRERAADRTHQPQSTSEPPTEPRPRQQHGRPGPERAAG
Ga0307301_102317962	3300028719	Soil	AEIEHYRRSYDITDPDLVLGPEPHDRGQRADRQRVRAAIERVHAKQRVTERARDIEPTAERTNQHRPQERHSRPGPERAAG
Ga0307319_100572841	3300028722	Soil	EHYRRSYHINDADRALGPEPHDSIQRADRQWVRSAIERVHGKQRATDRTHLRQPTSEPTTQPRLRQQRGWPGPERAAG
Ga0307319_101831641	3300028722	Soil	DPDRALGPEPHDPDQRAARQRTRSAIERVHAKQRAADRARDTQPTSEPPNQPRPHQQPGRPGPERAAG
Ga0307318_100658002	3300028744	Soil	EHYRRTYQITDPDRALGPEPHDPAQRAAQHRARSAIERVHAKQRAADRTRDTQPTSERPNQPRPHQQCGRPGPERAAG
Ga0307318_101545341	3300028744	Soil	RAWRQAAAEIEQYRHTYQITDPEQALGAEPADRAQRAARQRVGTAIERVQAKQRASDFTRDAWPTSERTTQPRSGEQRGRRGPERAAG
Ga0307318_101747652	3300028744	Soil	GPVPESTRGRRAWRHAAVEIEQYRRAYHISDPDRALGPEPRDPTQRADRQRAHTAIERVHAKQRAIDRTHQREPTSERHHQPRPPEQRGRPGPERAAG
Ga0307318_102935372	3300028744	Soil	ARRHAAAEIEQYRRSYQITDPNRALGPDPHDPGQRAARQQARSAIERVHAKQRAADRTRALQPTSERTTQPRPHQQRGQPGPERAAG
Ga0307318_103579962	3300028744	Soil	RAWRQAAGQIEQYRRSYHITDPDRALGPRPHDPTQRADRQRARTAIARVQAKQRAANRTHDRQPPSERTNQPRPREHRGHQGPERAAG
Ga0307318_103607752	3300028744	Soil	STRGRRAWRHAAAQIEHYRRTYHITDPDRALGAQPNDLTQRADRQQARTAIERLQTKQRAADRSRVTESTSERTSQPRPRAPRGRQGP
Ga0307320_102810861	3300028771	Soil	RRVWRQAAAEIEHYRRSYDITDPHRALGPEPRDPGQRADRRRVRAAIDRVHTKQRATDHTRDAQPTSERTNQPRSREQRGRPGPERAAG
Ga0307290_102747372	3300028791	Soil	ALGPVPESTRGRRAWHQAAAEIEQYRRAYHISDPERALGPEPHNPTQRADRQRVRTAIERVQARQRATDRTRDTEPTSDRPTQPRPHEPRGRHGPERAAG
Ga0307287_101854892	3300028796	Soil	PESTRGRRAWHQAAAEIEQYRRAYHISDPERALGPEPHNPTQRADRQRVRTAIERVQARQRATDRTRDTEPTSDRPTQPRPHEPRGRHGPERAAG
Ga0307287_102290681	3300028796	Soil	YRRAYHISDPDRALGPEPRDPTQRADRQRAHTAIERVHAKQRAIDRTHQREPTSERHHQPRPPEQRGRPGPERAAG
Ga0307292_101049482	3300028811	Soil	PDRALGSEPHDPAQRAGRQRARTTIDLIQTRERAADRTHQPQSTSERPTEPRPRQQHGRPGPERAAG
Ga0307296_106491002	3300028819	Soil	PVPESTRGRRAWRHAAVQIEDYRRTYHITNPDRALGAEPNNLTQRADRQRADSAIKQVQTKQRGADRSHDTQPTSEPANQPRPRTQRGRHGPERAAG
Ga0307312_101312863	3300028828	Soil	RYTYDITDPDRALGSEPHDPAQRAGRQRARTTIDLIQTRERAADRTHQPQSTSEPPTEPRPRQQHGRPGPERAAG
Ga0307286_100623282	3300028876	Soil	YRRSYQISDPERALGPEPGDPIQRADRRRAGTAIDRVHTKQRADRSRDAEPTSEPTTQAPARQQPSRRGPERAAG
Ga0307286_101187762	3300028876	Soil	AWRHAAVEIEQYRRAYHISDPDRALGPEPRDPTQRADRQRAHTAIERVHAKQRAIDRTHQREPTSERHHQPRPPEQRGRPGPERAAG
Ga0307277_104557292	3300028881	Soil	HITDPDRALGAQPNDLTQRADRQQARTAIERLQTKQRAADRSRVTESTSERTSQPRPRAPRGRQGPERAAG
Ga0247826_111025321	3300030336	Soil	IYNIADPERALGPEPHDPAQRAARQWVRTAIEQVHGKQRAADRIRDRQSTSERTTQPRPQEQRGRPGTERAAG
Ga0247826_117878882	3300030336	Soil	RGRRAWRQAAAEIEQYRRTYEITDPDRALGPEPHDSTQRADRQRVRMAIDRVHAKQRAADRTRDTQPTSERTTQPRARQQPGRRGPERAAG
Ga0268253_100185151	3300030514	Agave	IEHYRRTYQITDPDRALGPVPHDPTQRADRQRVGTAIERVQAKQRATDRIRDRQVTSEPTDQPRPGAQRGRRGPERAAG
Ga0268255_101277931	3300030516	Agave	YQITDPDRALGPEPRDLTQRADRQRARSAIERVQAKQRASDLTRDARPTSEPTTRPRSGEQRGPERAAG
Ga0307408_1021890881	3300031548	Rhizosphere	VPESTRGRRAWRHAAAEIEQYRRTYKISDLERALGPEPHDPAQRAARQRARTAIERVHGNQRATDRTEQRQPTSERTNPPRPRTLRGRPGLERAAG
Ga0307405_106186432	3300031731	Rhizosphere	PESTRGKRAWRHAAAEIEHYRRSYQITDPERAVGPEPHDPIQRADQQRARTAIERVQTKQRADRSRDAEPTKEPTIQPRPHQQPGRRGPERAAG
Ga0307405_110761462	3300031731	Rhizosphere	VPESTRGRRAWRQAAAQIEDYRRSYEITDPDRALGLEPRDPTQREARQRARTAIGRVHGKQRATDRTRDLQSTSQPNSTPRTRDQAAPPDRRDPERAAG
Ga0307405_111046102	3300031731	Rhizosphere	EDYRRSYHITDPERALGPEPHHPAQRAAGQRARTAIERVQAKQRATDRTRDLEPTAEGTNQSRPQERRSRPGPERAAG
Ga0307410_103545402	3300031852	Rhizosphere	PVPESTRGQRAWRQAAAEIEQYRRTYHVTDPDRALGPEPHDPGERADRQRARTAIERVQSKQRAADRTYERQPTSERTNQPRPHQQRGRPGPERAAG
Ga0307410_108462242	3300031852	Rhizosphere	HITDPDRALGPEPRDPAQRTDRQRARTAIERVHAKQRASDRIHNAQSTSERTSQPRPHQQRGRRGPERAAG
Ga0307410_108677982	3300031852	Rhizosphere	AAAEIEHYRRSYHITDPERALGPEPHDPAQRVDRQWVRAAIERVQAKQRTTDRTHQRQPTRERTNQPRPHQQHGPPGPERAAG
Ga0307410_119606442	3300031852	Rhizosphere	PESTRGRRAWRHAAAEIEQYRHTYQLTDPDRALGPQPRDPGQRADHQRARTAIARVHTKQRTTDRTHERQPTSERTSQPRPHQQRGRPGPERAAG
Ga0307406_109611672	3300031901	Rhizosphere	VPESTRGRRAWRQATAEIEHYRHTYGITDPDRALGPEPADRAQRAARQRVGTAIERVQARQRAADRSHQRQPTSDHTGQPRPGEQRGRRGPERAAG
Ga0307406_117381801	3300031901	Rhizosphere	VPESTRGKRAWRHAAAEIQQYRSAYHITDPERALGPEPHSPGQRADRQRARTAIERVRAKQRATNRSRDTQPTSERPIQPQ
Ga0307406_118244852	3300031901	Rhizosphere	ISDPERALGPEPHDPAQRAARQRARTAIERVHGNQRATDRTEQRQPTSERTNPPRPRTLRGRPGLERAAG
Ga0307407_104266801	3300031903	Rhizosphere	AQIEDYRHTYQITDPDHALGSEPRDPAQRVDRQRARTAIERVQAKQRATDRIHERQSIHEGTSQPRPREQRGRPGPERAVG
Ga0307407_114883972	3300031903	Rhizosphere	AHVLEALGPVPESTRGRRARRQAAAQIAQYRDTYGITDPDRALGPDPRDPAQRADRQRARTAIECVQAKQRAADRTHQRQLTSEQTSRPRPSEQRGRPGPERAAG
Ga0307409_1001446243	3300031995	Rhizosphere	YQITDPDRALGPAPHDPAQRADRQQVRTAIERVQAKQRATDRIRGTQPTTERTSQPRPHQQRDRPGPERAAG
Ga0307409_1005614193	3300031995	Rhizosphere	GRAWRQAAAAIEHYRRSYRITDPDRALGPVPHHPTQRAARQRARTAIERVQAKQRSTDPTRDAQSTSEPTSQPRSREQRGWPGPERAAG
Ga0307409_1012053081	3300031995	Rhizosphere	STRGRRAWRQAAAQIEHYRRSYQVTDPDRALGPESRDPAQRADRQRVRTAMEWVQAKQRASDRLRDLQPTAERTNQHRPQERRSRPGPERAAG
Ga0307409_1012583452	3300031995	Rhizosphere	QYRHTYQITDPDRALGLEPHDLGQRADRQRARTVIERVHAKQRATDRSRDAQSTSERTSQPRSRDQRGRSGPERAAG
Ga0307409_1015774312	3300031995	Rhizosphere	NRRSYQITDLERALGPEPHGPSQRADWQRARTAIERLQAKQRAADRTRDLQPTSEHTSQPQPRERHGRRGPERAAG
Ga0307416_1001337793	3300032002	Rhizosphere	YQITDPDRALGPEPRHPAQRADRQRVRTAIERVQTKQRATDRIRDVEPTAERTNQHRPQERCRRPGPERAAG
Ga0307416_1001347951	3300032002	Rhizosphere	LPAAEIEQNRRSYQITDLERALGPEPHGPSQRADWQRARTAIERLQAKQRAADRTRDLQPTSEHTSQPQPRERHGRRGPERAAG
Ga0307416_1002535221	3300032002	Rhizosphere	WRQAAAQIEDYRHTYQITDPERALGSEPRGPAQRADRQRVRTAIERVLAKQRATDRTHERQPTSERPSQPRPHQPRGRPGPERSAG
Ga0307416_1004493424	3300032002	Rhizosphere	GRQAWRQAAAEIEQYRRTYHITDSDWALGPEPHDFAQRADRQRARTAIDRVHGKQRATDRSRERQSTASDPPQPRVRQQRGRPGPERAAG
Ga0307416_1004626921	3300032002	Rhizosphere	QAAAEIEHYRRSYHITDPDRALGPEPHDPTQRADRQRVRTAIERVHVKQRATDRARDVEPTSERPSQPRPHERRGRSGSERAAG
Ga0307416_1013770321	3300032002	Rhizosphere	RTYQVTDPERALGPEPHNPGERADRQRVRMAIKRVQVKQRATDRSHDRQPTSEPTTQLRPHQQRGRPGPERAAG
Ga0307416_1018136442	3300032002	Rhizosphere	RRAWRHAAAQIEDYRRSYQITDPDRALGPEPHDPTQRADRQRARAAIERVQAKQRAAERARDAQPTSRPPSHQQRGRRGPEQAAG
Ga0307416_1021602842	3300032002	Rhizosphere	YRRSYHITDPDRALGAEPNDLSQRADRQRAREAIERLQAKQPAADRSRDTQSTSERTSQPRPRAQRGRPGPERVAG
Ga0307416_1026604412	3300032002	Rhizosphere	TRGRRAWRQAAAEIEHYRRIYQITDPNRALGPEPRDPAQWADRQRVRAVIDRVQAKQRVADRTHERQPTSERTSQPRPHHQRSRSGPERAAG
Ga0307416_1030750722	3300032002	Rhizosphere	AAQIADYRRTYRITDPDRVLGPEPRDPAQRAHRQRARTAMEWVQAKQRATDRIRNTEPTAGRTNQHRPQERRSRPGPERAAG
Ga0307416_1033866611	3300032002	Rhizosphere	PGRGRRAWRQAAAEIERYRRTYQVTDPDRALGPEPHDPAQQADRKQTRTAIERVHTKQRADRSRDAEPTREPTIQPRPHQQRGRRGPERAAG
Ga0307416_1036309721	3300032002	Rhizosphere	AWRQAAAEIEHYRRTYRITDPERALGPEPHDPAQRVDRQRARTAIERVQVKQRAADRIRDVQSTSDSANQPRAREQRRRGPERAAG
Ga0307414_111947911	3300032004	Rhizosphere	TRGRRAWRQAAAQIEHYRRSYHINDADRALGPEPADPAQRADRQQARTAIEQVHTKQRAADHSRDAERTGEPAIQPRLRQPRGRQGPERAAG
Ga0307414_115457762	3300032004	Rhizosphere	RPSFVWAALGPGPESTRGRRAWRPPAAAIEHYRRSYRITDPDRALGPVPHHPTQRAARQRARTAIERVQAKQRSTDPTRDAQSTSEPTSQPRSREQRGWPGPERAAG
Ga0307414_122673932	3300032004	Rhizosphere	QITDPEQALGPEPHNPAQRADRQRARTVIERVQAKQRADGPSRDTQPTSERIQQPRPHQQRGRPGPERAAG
Ga0307411_100463815	3300032005	Rhizosphere	HAAAEIEHYRCSYQITDPERAVGPEPHDPIQRADQQRARTAIERVQTKQRADRSRDAEPTKEPTIQPRPHQQPGRRGPERAAG
Ga0307411_103818352	3300032005	Rhizosphere	ADRPGYVLEALGPVPESTRGRRAWRHAAAEIEQYRRAYHITDPDRALGSDPRDPTQRADRQRAHTAIARVYVKQRAIDRTHQREPTSERPNQPRPRQQRGRPGQERAAG
Ga0307411_109899041	3300032005	Rhizosphere	GVGPRRASTGAGGAGRPAAAEIEHYRHSYGITDPERALGPEPRDSTQRADHQRARTSIDRVQAKQRAADRTRDAQPTSERLTQPRSYEQRGPERVAG
Ga0307411_122879712	3300032005	Rhizosphere	TDPDRALGTEPDDPAQRADRQRAHTAIERIHAKQRAADRSRDPQPISERTNQPRSDDQRGRRGPERAAG
Ga0307415_1002277501	3300032126	Rhizosphere	RAWRHAAAQIEQYRRTYQVTDPERALGPEPHNPGERADRQRVRMAIKRVQVKQRATDRSHDRQPTSEPTTQLRPHQQRGRPGPERAAG
Ga0307415_1003164312	3300032126	Rhizosphere	TDPDRALGLEPHDLGQRADRQRARTVIERVHAKQRATDRSRDAQSTSERTSQPRSRDQRGRSGPERAAG
Ga0307415_1007014051	3300032126	Rhizosphere	YVLEALGPVPASTRGRRAWRHAAADIEHYRNSYHITDPDRALGPEPHDPTQRADRQGVRTAIERVHSKQRATDRTQQRQPTSKHTRQPRPREQRGRPGPERAAG
Ga0307415_1008858451	3300032126	Rhizosphere	YVVVALGPVPASTRGRGAWRQAAAQIEHYRRSYQVTDPDRALGPESRDPAQRADRQRVRTAMEWVQAKQRASDRLRDLQPTAERTNQHRPQERRSRPGPERAAG
Ga0307415_1015536791	3300032126	Rhizosphere	VRCWRQAAAQIEHYRRSYQITDPKRALGPDPRDPAQRADRQRARTAIKQVQAKQRAADRSRDPQPTTE
Ga0307415_1025670491	3300032126	Rhizosphere	AWRQAAAQLEVYRRTYRITDPDRALGPEPRDSAQRADRQRVRGAIDRVQAKQRSTDRSCDVEPTAERINQHRPQERRSRQGPDRAAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F069799

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences