Metagenome Family F069798

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069798
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	73 residues
Representative Sequence	AFKHFIKMAETGVPVSYAGSPTPAAGEVLNTHVIPKMIQRVLVENWEAAKALDECHKKIAEIYGRYAKG
Number of Associated Samples	100
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	94.31 %
% of genes from short scaffolds (< 2000 bps)	90.24 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.683 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (13.821 % of family members)
Environment Ontology (ENVO)	Unclassified (26.829 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.341 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.55% β-sheet: 0.00% Coil/Unstructured: 48.45%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF00970	FAD_binding_6	10.57
PF00111	Fer2	8.94
PF00326	Peptidase_S9	8.94
PF00903	Glyoxalase	8.13
PF08241	Methyltransf_11	4.88
PF00866	Ring_hydroxyl_B	2.44
PF01928	CYTH	2.44
PF13473	Cupredoxin_1	2.44
PF00578	AhpC-TSA	1.63
PF00171	Aldedh	1.63
PF03239	FTR1	1.63
PF16952	Gln-synt_N_2	1.63
PF00072	Response_reg	1.63
PF12867	DinB_2	0.81
PF12697	Abhydrolase_6	0.81
PF13649	Methyltransf_25	0.81
PF13242	Hydrolase_like	0.81
PF00528	BPD_transp_1	0.81
PF04406	TP6A_N	0.81
PF06537	DHOR	0.81
PF01494	FAD_binding_3	0.81
PF00027	cNMP_binding	0.81
PF04392	ABC_sub_bind	0.81
PF00496	SBP_bac_5	0.81
PF00120	Gln-synt_C	0.81
PF00106	adh_short	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG5517	3-phenylpropionate/cinnamic acid dioxygenase, small subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.44
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	1.63
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.63
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	1.63
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	1.63
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.81
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.81
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.81
COG1697	DNA topoisomerase VI, subunit A	Replication, recombination and repair [L]	0.81
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.81
COG3488	Uncharacterized conserved protein with two CxxC motifs, DUF1111 family	General function prediction only [R]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.68 %
Unclassified	root	N/A	7.32 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.68 %
Unclassified	root	N/A	7.32 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.68 %
Unclassified	root	N/A	7.32 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	49.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	12.20 %
Unclassified	root	N/A	7.32 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.88 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	49.59 %
Unclassified	root	N/A	7.32 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6.50 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4.88 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	49.59 %
Unclassified	root	N/A	7.32 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	4.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.88 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	47.97 %
Unclassified	root	N/A	7.32 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.88 %
Kaistiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae	2.44 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	47.97 %
Unclassified	root	N/A	7.32 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.88 %
Kaistia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Kaistia	2.44 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	47.97 %
Unclassified	root	N/A	7.32 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.88 %
Kaistia granuli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Kaistia → Kaistia granuli	2.44 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_11119709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1184	Open in IMG/M
3300002912\|JGI25386J43895_10131499	All Organisms → cellular organisms → Bacteria → Proteobacteria	620	Open in IMG/M
3300004114\|Ga0062593_101495920	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300004156\|Ga0062589_100811468	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	849	Open in IMG/M
3300004633\|Ga0066395_10515510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	691	Open in IMG/M
3300005167\|Ga0066672_10067571	All Organisms → cellular organisms → Bacteria	2103	Open in IMG/M
3300005174\|Ga0066680_10077970	All Organisms → cellular organisms → Bacteria	1995	Open in IMG/M
3300005174\|Ga0066680_10889493	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	529	Open in IMG/M
3300005176\|Ga0066679_10500621	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	792	Open in IMG/M
3300005183\|Ga0068993_10112237	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300005332\|Ga0066388_100692224	All Organisms → cellular organisms → Bacteria	1628	Open in IMG/M
3300005332\|Ga0066388_101411756	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300005334\|Ga0068869_101329005	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300005335\|Ga0070666_11402236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Kaistia → Kaistia granuli	522	Open in IMG/M
3300005345\|Ga0070692_10448944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	825	Open in IMG/M
3300005356\|Ga0070674_101382873	All Organisms → cellular organisms → Bacteria → Proteobacteria	630	Open in IMG/M
3300005364\|Ga0070673_101760617	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300005366\|Ga0070659_102057921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Kaistia → Kaistia granuli	513	Open in IMG/M
3300005438\|Ga0070701_10985712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Kaistia → Kaistia granuli	587	Open in IMG/M
3300005467\|Ga0070706_100514741	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1113	Open in IMG/M
3300005467\|Ga0070706_101076946	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300005467\|Ga0070706_101086720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	736	Open in IMG/M
3300005555\|Ga0066692_10769149	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	594	Open in IMG/M
3300005555\|Ga0066692_10942364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	528	Open in IMG/M
3300005556\|Ga0066707_10089614	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1871	Open in IMG/M
3300005557\|Ga0066704_10077765	All Organisms → cellular organisms → Bacteria	2147	Open in IMG/M
3300005557\|Ga0066704_10558028	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	744	Open in IMG/M
3300005558\|Ga0066698_10679749	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	682	Open in IMG/M
3300005568\|Ga0066703_10610318	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	635	Open in IMG/M
3300005719\|Ga0068861_102070628	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	569	Open in IMG/M
3300005764\|Ga0066903_108564393	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	521	Open in IMG/M
3300006058\|Ga0075432_10178170	All Organisms → cellular organisms → Bacteria → Proteobacteria	830	Open in IMG/M
3300006844\|Ga0075428_102345382	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	549	Open in IMG/M
3300006847\|Ga0075431_100760883	All Organisms → cellular organisms → Bacteria → Proteobacteria	944	Open in IMG/M
3300006854\|Ga0075425_100017485	All Organisms → cellular organisms → Bacteria → Proteobacteria	7792	Open in IMG/M
3300006854\|Ga0075425_101689450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	712	Open in IMG/M
3300006871\|Ga0075434_100428168	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300006871\|Ga0075434_102127634	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	565	Open in IMG/M
3300006880\|Ga0075429_101433508	Not Available	601	Open in IMG/M
3300006904\|Ga0075424_100117462	All Organisms → cellular organisms → Bacteria	2810	Open in IMG/M
3300006954\|Ga0079219_10355953	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	943	Open in IMG/M
3300007265\|Ga0099794_10532869	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300009012\|Ga0066710_102489203	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	749	Open in IMG/M
3300009094\|Ga0111539_10015697	All Organisms → cellular organisms → Bacteria → Proteobacteria	9415	Open in IMG/M
3300009094\|Ga0111539_10658135	All Organisms → cellular organisms → Bacteria	1220	Open in IMG/M
3300009100\|Ga0075418_11688192	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	688	Open in IMG/M
3300009137\|Ga0066709_100119579	All Organisms → cellular organisms → Bacteria	3287	Open in IMG/M
3300009137\|Ga0066709_103703141	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	555	Open in IMG/M
3300009147\|Ga0114129_13473703	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	504	Open in IMG/M
3300009147\|Ga0114129_13484005	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	503	Open in IMG/M
3300009148\|Ga0105243_10316064	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1421	Open in IMG/M
3300009148\|Ga0105243_11253148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	757	Open in IMG/M
3300009148\|Ga0105243_11299937	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	744	Open in IMG/M
3300009156\|Ga0111538_11892503	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300009174\|Ga0105241_10300570	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1377	Open in IMG/M
3300009177\|Ga0105248_10506454	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300010046\|Ga0126384_10904539	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	797	Open in IMG/M
3300010046\|Ga0126384_11277693	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	680	Open in IMG/M
3300010047\|Ga0126382_11369771	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	643	Open in IMG/M
3300010359\|Ga0126376_11268494	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	755	Open in IMG/M
3300010359\|Ga0126376_12680572	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	547	Open in IMG/M
3300010360\|Ga0126372_11554002	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300010362\|Ga0126377_10451293	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300010362\|Ga0126377_10743114	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300010373\|Ga0134128_12161299	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	613	Open in IMG/M
3300010376\|Ga0126381_100815465	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300010391\|Ga0136847_10084551	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	503	Open in IMG/M
3300010398\|Ga0126383_12208509	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	637	Open in IMG/M
3300010398\|Ga0126383_13001821	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	551	Open in IMG/M
3300010398\|Ga0126383_13360064	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	523	Open in IMG/M
3300010400\|Ga0134122_13049341	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	523	Open in IMG/M
3300010401\|Ga0134121_12939935	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	523	Open in IMG/M
3300012355\|Ga0137369_10170206	All Organisms → cellular organisms → Bacteria	1711	Open in IMG/M
3300012360\|Ga0137375_10861695	Not Available	723	Open in IMG/M
3300012582\|Ga0137358_10667591	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	695	Open in IMG/M
3300012582\|Ga0137358_10972937	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	551	Open in IMG/M
3300012685\|Ga0137397_10344196	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300012929\|Ga0137404_10028728	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4094	Open in IMG/M
3300012948\|Ga0126375_11051471	Not Available	667	Open in IMG/M
3300012971\|Ga0126369_11131993	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	872	Open in IMG/M
3300012971\|Ga0126369_13471275	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	516	Open in IMG/M
3300013100\|Ga0157373_10376109	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1016	Open in IMG/M
3300015371\|Ga0132258_10041305	All Organisms → cellular organisms → Bacteria	10472	Open in IMG/M
3300015372\|Ga0132256_103245828	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	547	Open in IMG/M
3300015373\|Ga0132257_102567566	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300015374\|Ga0132255_104839905	Not Available	570	Open in IMG/M
3300017947\|Ga0187785_10385253	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	670	Open in IMG/M
3300018032\|Ga0187788_10413979	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	568	Open in IMG/M
3300018077\|Ga0184633_10549073	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	553	Open in IMG/M
3300018468\|Ga0066662_10867109	Not Available	883	Open in IMG/M
3300018468\|Ga0066662_11398625	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300018482\|Ga0066669_12457511	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	500	Open in IMG/M
3300020004\|Ga0193755_1156535	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	687	Open in IMG/M
3300025580\|Ga0210138_1056559	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300025899\|Ga0207642_10145669	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300025911\|Ga0207654_10318812	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1062	Open in IMG/M
3300025941\|Ga0207711_11214914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	695	Open in IMG/M
3300025941\|Ga0207711_11725723	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	569	Open in IMG/M
3300025942\|Ga0207689_10883343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	754	Open in IMG/M
3300025972\|Ga0207668_10364573	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300025981\|Ga0207640_12060959	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M
3300026067\|Ga0207678_11612369	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	571	Open in IMG/M
3300026118\|Ga0207675_100635022	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300026309\|Ga0209055_1051532	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1774	Open in IMG/M
3300026317\|Ga0209154_1116399	Not Available	1132	Open in IMG/M
3300026326\|Ga0209801_1094267	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1299	Open in IMG/M
3300026334\|Ga0209377_1339240	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	506	Open in IMG/M
3300027903\|Ga0209488_10036355	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3600	Open in IMG/M
3300027907\|Ga0207428_10316950	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300028380\|Ga0268265_12024417	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	583	Open in IMG/M
3300028536\|Ga0137415_10305092	Not Available	1396	Open in IMG/M
3300028597\|Ga0247820_11032561	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	588	Open in IMG/M
3300030496\|Ga0268240_10204938	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10008914	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2583	Open in IMG/M
3300031562\|Ga0310886_10241697	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1006	Open in IMG/M
3300031720\|Ga0307469_10881867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	827	Open in IMG/M
3300031820\|Ga0307473_11260359	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	552	Open in IMG/M
3300031962\|Ga0307479_10053373	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3890	Open in IMG/M
3300032013\|Ga0310906_10968523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	610	Open in IMG/M
3300032164\|Ga0315283_10672329	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1117	Open in IMG/M
3300032180\|Ga0307471_100283440	All Organisms → cellular organisms → Bacteria	1733	Open in IMG/M
3300033812\|Ga0364926_117525	Not Available	557	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.04%
Host-Associated	Host-Associated	34.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.98%
Plants	Host-Associated → Plants	34.96%
Aquatic	Environmental → Aquatic	4.06%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.13%
Freshwater	Environmental → Aquatic → Freshwater	1.63%
Marine	Environmental → Aquatic → Marine	1.63%
Sediment	Environmental → Aquatic → Sediment	0.81%
Floodplain	Environmental → Terrestrial → Floodplain	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.14%
Loam	Environmental → Terrestrial → Soil → Loam	7.32%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.44%
Lake	Environmental → Aquatic → Freshwater → Lake	1.63%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%
Sand	Environmental → Terrestrial → Soil → Sand	0.81%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.14%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.06%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.25%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.44%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.44%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.63%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.63%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	13.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.20%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.32%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.06%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.25%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.44%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.44%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.63%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.63%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.81%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.81%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300025580	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033812	Sediment microbial communities from East River floodplain, Colorado, United States - 65_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_111197091	3300000363	Soil	YKRLFDTPFWREKPVFKNFITMAEQGVPLSYAGSPTPAAGEVLNTHVIPKAVQRVLVENWPAEKALEEGHKTIAEIYARHNKG*
JGI25386J43895_101314992	3300002912	Grasslands Soil	FIKMAETGVPVSYAGSPTPAAGEVLNTHLIPKMIQRVLVDGWEAARALDECHKRIVEVYARYARG*
Ga0062593_1014959202	3300004114	Soil	FKHFIKMAETGVPVSFAGSPTPAAGEVLNTHVIPKMIQRVLVENWEAAKALDECQKRIAEIYARNAKG*
Ga0062589_1008114682	3300004156	Soil	PVYKRLFDSPFWHEKPAFKHFIKMAETGVPVSFAGSPTPAAGEVLNTHVIPKMIQRVLVENWEAAKALDECHKRIVEIYTRNAKG*
Ga0066395_105155102	3300004633	Tropical Forest Soil	VSYAGSPTPAAGEELNTNIIPKMIQRVLVENWEAARALDECHKKIAEVYARHAKG*
Ga0066672_100675711	3300005167	Soil	FKHFIKMAETGVPVSYAGSPTPAAGEVLNTHLVPKMIQRVLVENWEPARALDECHKRIVEIYARYAKG*
Ga0066680_100779701	3300005174	Soil	AETGVPVSYAGSPTAAAGEVLNTHVIPKMIQRVLVENWEPAKALEECQKQIVEIYARHNKA*
Ga0066680_108894931	3300005174	Soil	WKSKPEFKHFVGMAETGMPVSYAGSPTPAAGEVLNTHVIPKMIQRVLVDNWEPPRALEECHRRIEEVYARNLKL*
Ga0066679_105006211	3300005176	Soil	GGRWVPVYKRLFDSPFWKSKPEFKHFVSMAETGVPVSYAGSPTPAAGEVLNTHIIPKMIQRVLVDNWEPPRALEECHRRIDEVYARNRKV*
Ga0068993_101122371	3300005183	Natural And Restored Wetlands	VSYAGSPTPAAGEVLNTQVIPKMIQRVLVENWEAARALDECHKKIAEIYARYEKG*
Ga0066388_1006922241	3300005332	Tropical Forest Soil	GVPVSYAGSPTPAAGEVLNTHVVGKMVQRVLVDNWPAEKATEEAHKVIAEIYARHNKG*
Ga0066388_1014117562	3300005332	Tropical Forest Soil	MAETGVPVSYAGSPTPAAGEVLNTHVIPKMIQRVLVDNWEPARALDECQKRIVEIYARNEKS*
Ga0068869_1013290051	3300005334	Miscanthus Rhizosphere	HFIKMAETGVPVSFAGSPTPAAGEVLNTHVIPKMIQRVLVENWEAAKALDECQKRIVEIYTRNAKG*
Ga0070666_114022361	3300005335	Switchgrass Rhizosphere	QSTGGRWVPVYKRLFESPFWKEKPVFKNFIQMAEQGVPLSYAGSPTPAAGEVLNTHVIPKAVQRVLIENWPAEKALEEGHKTIAEIYARHNKG*
Ga0070692_104489441	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	FKHFIKMAETGVPVSFAGSPTPAAGEVLNTHVIPKMIQRVLVENWEAAKALDECHKKIAEIYARYEKG*
Ga0070674_1013828732	3300005356	Miscanthus Rhizosphere	VYKRLFDSPFWKEKPAFAHFIKMAETGVPVSYGGSPTPAAGEVLNTHVIPKMIQRVLVENWEAAKALDECHKKIAEIYVRNAKG*
Ga0070673_1017606171	3300005364	Switchgrass Rhizosphere	FDSPFWKEKPAFAHFIKMAETGVAVSYAGSPTPAAGEVLNTHVIPKMIQRVLVENWEAAKALDECHKKIAEIYVRNAKG*
Ga0070659_1020579211	3300005366	Corn Rhizosphere	PVFKNFIQMAEQGVPLSYAGSPTPAAGEVLNTHVIPKAVQRVLIENWPAEKALEEGHKTIAEIYARHNKG*
Ga0070701_109857121	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VPVYKRLFESPFWKEKPVFKNFIQMAEQGVPLSYAGSPTPAAGEVLNTHVIPKAVQRVLIENWPAEKALEEGHKTIAEIYARHNKG*
Ga0070706_1005147411	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	PAFKHFTQMAETGVPVSYAGSPTPAAGEVLNTHLIPKMIQRVLVDNWPADKALDECHRQVAEIYARHQKG*
Ga0070706_1010769461	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	INMAETGVPVSYAGSPTAAAGEVLNTHVIPKMIQRVLVENWEPAKALEECQKQIVEIYARHNKA*
Ga0070706_1010867202	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	ETGVPVSYAGAPTPAAGEVLNTHVIPKMIQRVLVDGWEAGKALEECDKRIVEIYSRYNKA
Ga0066692_107691491	3300005555	Soil	QSTGGRWVPVYKRLFDSPFWKSKPEFKHFVGMAETGMPVSYAGSPTPAAGEVLNTHVIPKMIQRVLVDNWEPPRALEECHRRIDEVYARNRKV*
Ga0066692_109423641	3300005555	Soil	PVSYAGAPTPAAGEVLNTHVIPKMIQRVLVDGWEAAKALEECDKRIVEIYSRYNKA*
Ga0066707_100896145	3300005556	Soil	HFINMAETGVPVSYAGAPTPAAGEVLNTHVIPKMIQRVLVDNWEAAKALEECDKRINEIYARHNKA*
Ga0066704_100777651	3300005557	Soil	PVSYAGSPTPAAGEVLNTHLIPKMIQRVLVDNWEAARALDECHKRIVEVYARYARG*
Ga0066704_105580282	3300005557	Soil	PFWKSKPEFKHFVSMAETGVPVSYAGSPTPAAGEVLNTHIIPKMIQRVLVDNWEPPRALEECHRRIDEVYARNRKV*
Ga0066698_106797492	3300005558	Soil	FIQMAETGVPVSYAGAPTPAAGEVLNTHLIPKMVQRVLVDNWEPAKALDECHKKIADVYARYEKA*
Ga0066703_106103181	3300005568	Soil	YKRLFDSPFWKSKPEFKHFVSMAETGVPVSYAGSPTPAAGEVLNTHIIPKMIQRVLVDNWEPPRALEECHRRIDEVYARNRKV*
Ga0068861_1020706281	3300005719	Switchgrass Rhizosphere	TMAEQGVPLSYAGSPTPAAGEVLNTHVIPKAVQRVLVENWPAEKALEEGHKTIAEIYARHNKG*
Ga0066903_1085643933	3300005764	Tropical Forest Soil	HFIQMAETGVPVSYAGSPTPAAGEVLNTHVVGKMTQRVLVDNWPAEKAVEEAHKVIAEIYARHNKG*
Ga0075432_101781702	3300006058	Populus Rhizosphere	GVAVSYAGSPTPAAGEVLNTHVIPKMIQRVLVENWEAAKALDECQKKIAEIYVRHAKG*
Ga0075428_1023453821	3300006844	Populus Rhizosphere	WREKTEFKHFIHMAETGVPVSHAGAPTAAAGEVLNTHVIPKMIQRVLVENWDAAKALEECDKRIVEIYARYNKA*
Ga0075431_1007608831	3300006847	Populus Rhizosphere	EKTEFKHFIHMAETGVPVSHAGAPTAAAGEVLNTHVIPKMIQRVLVENWEAAKALDECQKKIAEIYVRHAKG*
Ga0075425_1000174851	3300006854	Populus Rhizosphere	MAETGVPVSYAGAPTPAAGEVLNTHVIPKMIQRVLVDNWEPAKALDECDKRIVEIYSRYSKA*
Ga0075425_1016894502	3300006854	Populus Rhizosphere	YKRLFDSPFWREKPEFKHFINMAETGVPVSYAGAPTPAAGEVLNTHVIPKMIQRVLVDNWEPVKALDECDKRIVEIYSRFSKA*
Ga0075434_1004281681	3300006871	Populus Rhizosphere	FWREKPEFKHFINMAETGVPVSYAGAPTPAAGEVLNTHVIPKMIQRVLVDNWEPVKALDECDKRIVEIYSRFSKA*
Ga0075434_1021276342	3300006871	Populus Rhizosphere	PFWREKPEFKHFINMAETGVPVSYAGAPTPAAGEVLNTHVIPKMIQRVLVDNWEPAKALDECDKRIVEIYARYSKA*
Ga0075429_1014335081	3300006880	Populus Rhizosphere	YAGSPTPAAGDVLATHLIGKMTQRVLVENWPAEKAVEEAHKTIAEIYARHNKG*
Ga0075424_1001174623	3300006904	Populus Rhizosphere	NMAETGVPVSYAGAPTPAAGEVLNTHVIPKMIQRVLVDNWEPVKALDECDKRIVEIYSRFSKA*
Ga0079219_103559531	3300006954	Agricultural Soil	IKMAETGVPVSYAGSPTPAAGEVLNTNIIPKMIQRVLVENWEAAKALDECHKKIVEIYGRYAKG*
Ga0099794_105328692	3300007265	Vadose Zone Soil	FDSPFWKEKLAFKHFIKMAETGVPVSYAGSPTPAAGEVLNTHLIPKMIQRVLVDNWEAARALDECHKRIVEVYARYARG*
Ga0066710_1024892032	3300009012	Grasslands Soil	EKPAFKHFIQMAETGVPASYAGAPTPAAGEVLNTHLIPKMVQRVLVDNWEPANALDECHKKIADVYARYEKA
Ga0111539_1001569711	3300009094	Populus Rhizosphere	AFAHFIKMAETGVAVSYAGSPTPAAGEVLNTHVIPKMIQRVLVENWEAAKALDECQKKIAEIYVRHAKG*
Ga0111539_104341323	3300009094	Populus Rhizosphere	SYAGSPTPAAGEVLATHVIPKMTQRVLVESWPAEKAVEEAHKAIAEIYARHAKG*
Ga0111539_106581353	3300009094	Populus Rhizosphere	VFKNFIQMSEQGVLLSYAGSPTPAAGEVLNTHVIPKAVQRVLIENWPAEKALEEGHKTIAEIYARHNKG*
Ga0075418_116881921	3300009100	Populus Rhizosphere	IVQSTGGRWVPVYKRLFDSPFWREKPVFKHFIQLAETGVPVSYAGSPNPAAGEVLNTHVIGKMTQRVLVENWPAEKAVEEAHKAIAEIYARHAKG*
Ga0066709_1001195793	3300009137	Grasslands Soil	ETGVPVSYAGAPTPAAGEVLNTHLIPKMVQRVLVDNWEPAKALDECHKKIADVYARYEKA
Ga0066709_1037031411	3300009137	Grasslands Soil	PEFKYFVGMAETGMPVSYAGSPTPAAGEVLNTHVIPKMIQRVLVDNWEPPRALEECHRRIEEVYARNLKL*
Ga0114129_134737032	3300009147	Populus Rhizosphere	EKTEFKHFIHMAETGVPVSHAGAPTAAAGEVLNTHVIPKMIQRVLVENWEPAKALEECDKRIVEIYARYNKA*
Ga0114129_134840051	3300009147	Populus Rhizosphere	ETGVPVSFGGSPTPAAGEVLNTHVIPKMIQRVLVENWEAAKALDECQKKIAEIYVRHAKG
Ga0105243_103160643	3300009148	Miscanthus Rhizosphere	VYKRLFDSPFWKEKPAFAHFIKMAETGVAVSYAGSPTPAAGEVLNTHVIPKMIQRVLVENWEAAKALDECHKKIAEIYVRNAKG*
Ga0105243_112531482	3300009148	Miscanthus Rhizosphere	FKHFIRMAETGVPVSYAGSPTPAAGEVMNTQIIPKMIQRVLVENWEAAKALDECHKKIAEIYARYEKG*
Ga0105243_112999372	3300009148	Miscanthus Rhizosphere	VYKRLFDSPFWKEKPAFAHFIKMAETGVPVSYGGSPTPAAGEVRNTHVNPKMIHRVLVENWEAAKALDECHKKIAEIYARNAKG*
Ga0111538_118925032	3300009156	Populus Rhizosphere	WREKTEFKHFIHMAETGVPVSHAGAPTAAAGEVLNTHVIPKMIQRVLVENWEAAKALEECDKRIVEIYARYNKA*
Ga0105241_103005701	3300009174	Corn Rhizosphere	VYKRLFDSPFWKEKPAFAHFIKMAETGVAVSFAGSPTPAAGEVLNTHVIPKMIQRVLVENWEAAKALDECHKKIAEIYVRHAKG*
Ga0105248_105064541	3300009177	Switchgrass Rhizosphere	AFKHFIRMAETGVPVSYAGSPTPAAGEVLNTNIIPKMVQRVLVDNWEPAKALDECHKKIAEIYVRYEKG*
Ga0126384_109045392	3300010046	Tropical Forest Soil	GGRWVPVYKRLFDSPFWKEKPAFKYFIRMAETGVPVSYAGSPTPAAGEVLNTNIVPKMIQRVLVDGWEPARALDECHKKIVEVYARHDKG*
Ga0126384_112776931	3300010046	Tropical Forest Soil	HFIKMAETGVAVSYAGSPTPAAGEVLNTHVIPKMIQRVLVENWEAPKALDECHKKIVEIYARYAKG*
Ga0126382_113697712	3300010047	Tropical Forest Soil	STGGRWVPVYKRLFDSPFWTSKPAFKHFIKMAETGVPVSYAGSPTPAAGEVLNTHVIPKMIQRVLVDNWEPARALDECQKRIVEIYARNEKS*
Ga0126376_112684942	3300010359	Tropical Forest Soil	AFAHFIKMAETGVAVSYAGAPTPAAGEVLNTHVIPKMIQRVLVENWEATKALDECHKKIAEIYARYAKG*
Ga0126376_126805722	3300010359	Tropical Forest Soil	AFAHFIKMAETGVAVSYAGAPTPAAGEVLNTHVIPKMIQRVLVENWEAARALDECHKKIAEVYARHAKG*
Ga0126372_115540021	3300010360	Tropical Forest Soil	AFVHFIKMAETGVPVSYAGSPTPAAGEVLNTHVIPKMIQRVLVENWEPAKALDECHKKIAEIYTRYAKG*
Ga0126377_104512932	3300010362	Tropical Forest Soil	VPVSYAGAPTPAAGEVLNLHVIPKMIQRVLVENWEAAKALDECHKRIVEIYSRYAKG*
Ga0126377_107431142	3300010362	Tropical Forest Soil	AFKHFIKMAETGVPVSYAGSPTPAAGEVLNTHVIPKMIQRVLVENWEAAKALDECHKKIAEIYGRYAKG*
Ga0134128_121612991	3300010373	Terrestrial Soil	HFIRMAETGVPVSYAGSPTPAAGEVLNTQIIPKMIQRVLVENWEAPKALEECHKKIAEIYARYNKG*
Ga0126381_1008154652	3300010376	Tropical Forest Soil	GVPVSYAGSPTPAAGEVLNTQVIPKMIQRVLVENWEAARALDESHKKIAEIYARYEKG*
Ga0136847_100845512	3300010391	Freshwater Sediment	QMAETGVPMSYAGSPTPAAGEVLNTHVIPKMIQRVLVENFEPARALDECHKRIAEIYARYARG*
Ga0126383_122085092	3300010398	Tropical Forest Soil	MAETGVPVSYAGAPTAAAGEVLNTHVIPKMIQRGLVDGWEPAKALDECDKRIVEIYARYNKA*
Ga0126383_130018212	3300010398	Tropical Forest Soil	FQHFIKMAETGVPVSFAGSPTPAAGEVLNTHVIPKMIQRVLVENWEAPKALDECHKKIVEIYARYAKG*
Ga0126383_133600641	3300010398	Tropical Forest Soil	PVYKRLFDSPFWREKPAFRYFIQMAETGVPVSYAGAPTPAAGEVLNTQVIPKMIQRVLVDGWEPARALDECHKRIVEIYARQQKG*
Ga0134122_130493411	3300010400	Terrestrial Soil	SYAGSPTPAAGEVLNTNLIPKMVQRVLVENWPAEKAAEEAHKAVAEVYARYNKG*
Ga0134121_129399352	3300010401	Terrestrial Soil	WVPFYKRLFDSPFWHEKPAFKHFIKMAETGVPVSFAGSPTPAAGEVLNTHVIPKMIQRVLVENWEAAKALDECQKRIVEIYTRNAKG*
Ga0137369_101702062	3300012355	Vadose Zone Soil	MAETGVAVSYAGSPTPAAGEVLNTHVVPKMIQRVLVDNWDAARALDECHKRIAEIYTRHAK*
Ga0137375_108616951	3300012360	Vadose Zone Soil	KHFIQMAETGVPVSSGGSPTPAAGEVLNTHVIPKMVQRVLVENWEPAKALEECHKKIAEIYARHEKA*
Ga0137358_106675911	3300012582	Vadose Zone Soil	KRLFDSPFWKEKPAFVHFIKMAETGVPVSYAGSPTPAAGEVLNTHVIPKMIQRVLVENWDAAKALDECHKKIAEIYTRSAKG*
Ga0137358_109729372	3300012582	Vadose Zone Soil	PVYKRLFDSPFWKEKPAFKHFIKMAETGVPVSFAGSPTPAAGEVLNTHVIPKMIQRVLVESWEPAKALEECHKRITEIYARNARG*
Ga0137397_103441961	3300012685	Vadose Zone Soil	EKPEFKHFINMAETGVPVSYAGAPTPAAGEVLNTHVIPKMIQRVLVENWEPAKALEECDRRIVEIYARYNKA*
Ga0137404_100287281	3300012929	Vadose Zone Soil	LFDSPFWREKPEFRHFVNMAETGVPVSYAGSPTAAAGEVLNTHVIPKMIQRVLVENWEPAKALEECDKRIVEIYARHAKV*
Ga0126375_110514712	3300012948	Tropical Forest Soil	MAETGVPVSYAGSPTPAAGEVLNTHVIPKMIQNVLVDNWEPARALDECQKRIVEIYARNEKS*
Ga0126369_111319933	3300012971	Tropical Forest Soil	VPVSYAGSPTPAAGEVLNTNIIPKMIQRVLVENWEAARALDECHKKIAEVYARHAKG*
Ga0126369_134712752	3300012971	Tropical Forest Soil	ITMAEQGVPLSYAGSPTPAAGEVLNTNVIGKMVQRVLVENWAAEKATEEAHKVVTDIYARHNQG*
Ga0157373_103761092	3300013100	Corn Rhizosphere	WVPVYKRLFDSPFWKEKPAFAHFIKMAETGVPVSYGGSPTPAAGEVLNTHVIPKMIQRVLVENWEAAKALDECHKKIAEIYARNAKG*
Ga0132258_1004130512	3300015371	Arabidopsis Rhizosphere	VYKRLFDSPFWKEKPAFKHFIQMAETGVPVSYAGSPTPAAGEVLNTQVIPKVVQRVLVENWEPAKALEEGHKKIAEIYARHEKA*
Ga0132256_1032458281	3300015372	Arabidopsis Rhizosphere	SPFWKEKPVFKNFIQMAEQGVPLSYAGSPTPAAGEVLNTHVIPKAVQRVLIENWPAEKALEEGHKTIAEIYARHNKG*
Ga0132257_1025675661	3300015373	Arabidopsis Rhizosphere	EKPAFKHFIKMAETGVPVSFAGSPTPAAGEVLNTHVIPKMIQRVLVENWEAAKALDECQKRIVEIYTRNAKG*
Ga0132255_1048399051	3300015374	Arabidopsis Rhizosphere	KPAFKHFIQMAETGVPVSYAGSPTPAAGEVLNTHVIPKMVQRVLVENWEPAKALEECHKKIAEIYARFEKA*
Ga0187785_103852532	3300017947	Tropical Peatland	GRWVPVYKRLFDSPFWKEKPVFKYFIQMAEQGVPLSYAGSPTPAAGEVLNTHVIPKVVQRVLVDNWPAEKALEEGHKAVAEIYARHNKG
Ga0187788_104139791	3300018032	Tropical Peatland	WKEKPVFKYFIQMAEQGVPLSYAGSPTPAAGEVLNTHVIPKAVQRVLVDNWPAEKALEEGHKAVAEIYARHNKG
Ga0184633_105490732	3300018077	Groundwater Sediment	MAETGAPVSYAGSPTPAAGEVLNTHVVPKMIQRVLVDNWEAARALDECHKRIAEIYTRHA
Ga0066662_108671091	3300018468	Grasslands Soil	PFWKSKPEFKHFVGMAETGMPVSYAGSPTPAAGEVLNTHVIPKMIQRVLVDNWEPPRALEECHRRIEEVYARNLKL
Ga0066662_113986251	3300018468	Grasslands Soil	KPEFRHFINMAETGVPVSYAGAPTPAAGEVLNTHVIPKMIQRVLVDSWEPAKALEECDKRIVEIYSRYNKA
Ga0066669_124575112	3300018482	Grasslands Soil	IIQSTGGRWVPVYKRLFDSPFWREKPEFKHFIHMAETGVPVSYAGSPTPPAGEVLNTHVIPKMIQRVLVENFDPARALDECHKRIVEVYARYAKG
Ga0193755_11565352	3300020004	Soil	FAHFIKMAETGVPVSYAGSPTPAAGEVLNTHVIPKMIQRVLVENWDAAKALDECHKKIAEIYARSAKG
Ga0210138_10565591	3300025580	Natural And Restored Wetlands	GVPVSYAGSPTPAAGEVLNTQVIPKMIQRVLVENWEAARALDECHKKIAEIYARYEKG
Ga0207642_101456691	3300025899	Miscanthus Rhizosphere	KPEFKHFINMAETGVPVSYAGAPTPAAGEVLNTHVIPKMIQRVLVDNWEPGKALEECDKRIVEIYSRFNKA
Ga0207654_103188121	3300025911	Corn Rhizosphere	VPVYKRLFDSPFWKEKPAFAHFIKMAETGVAVSFAGSPTPAAGEVLNTHVIPKMIQRVLVENWEAAKALDECHKKIAEIYVRHAKG
Ga0207711_112149141	3300025941	Switchgrass Rhizosphere	PFWKEKPAFKHFIRMAETGVPVSYAGSPTPAAGEVLNTNIIPKMVQRVLVDNWEPAKALDECHKKIAEIYVRYDKG
Ga0207711_117257231	3300025941	Switchgrass Rhizosphere	SPFWREKPEFKHFINMAETGVPVSYAGAPTPAAGEVLNTHVIPKMIQRVLVDSWEPAKALDECDKRIVEIYSRFNKA
Ga0207689_108833431	3300025942	Miscanthus Rhizosphere	PFWKEKPAFKHFIRMAETGVPVSYAGSPTPAAGEVMNTQIIPKMIQRVLVENWEAAKALDECHKKIAEIYARYEKG
Ga0207668_103645733	3300025972	Switchgrass Rhizosphere	AETGVPVSYAGAPTPAAGEVLNTHVIPKMIQRVLVDNWEPGKALEECDKRIVEIYSRFNK
Ga0207640_120609591	3300025981	Corn Rhizosphere	FDSPFWKEKPAFKHFIRMAETGVPVSYAGSPTPAAGEVMNTQIIPKMIQRVLVENWEAAKALDECHKKIAEIYARYEKG
Ga0207678_116123691	3300026067	Corn Rhizosphere	PVYKRLFDSPFWKEKPAFKHFIRMAETGVPVSYAGSPTPAAGEVMNTQIIPKMIQRVLVENWEAAKALDECHKKIAEIYARNAKG
Ga0207675_1006350222	3300026118	Switchgrass Rhizosphere	KPAFSHFIKMAETGVAVSYAGSPTPAAGEVLNTHVIPKMIQRVLVENWEAAKALDECHKKIAEIYVRHAKG
Ga0209055_10515321	3300026309	Soil	WVPVYKRLFDSPFWKSKPEFKHFVSMAETGVPVSYAGSPTPAAGEVLNTHIIPKMIQRVLVDNWEPPRALEECHRRIDEVYARNRKV
Ga0209154_11163992	3300026317	Soil	AETGMPVSYAGSPTPAAGEVLNTHVIPKMIQRVLVDNWEPPRALEECHRRIEEVYARNLK
Ga0209801_10942672	3300026326	Soil	KRLFDSPFWKSKPEFKHFVSMAETGVPVSYAGSPTPAAGEVLNTHIIPKMIQRVLVDNWEPPRALEECHRRIDEVYARNRKV
Ga0209377_13392402	3300026334	Soil	REKPEFRHFINMAETGVPVSYAGAPTPAAGEVLNTHVIPKMIQRVLVDGWEPAKALDECDKRIVEIYSRYNKA
Ga0209488_100363556	3300027903	Vadose Zone Soil	IQSTGGRWVPVYKRLFDQPFWREKPEFKHFINMAETGVPVSYAGSPTAAAGEVLNTHVIPQMVQRVLVENWEAAKALDECQKRIVEIYARHNKA
Ga0207428_103169501	3300027907	Populus Rhizosphere	VYKRLFDSPFWHEKPAFKHFIKMAETGVPVSFAGSPTPAAGEVLNTHVIPKMIQRVLVENWEAAKALDECQKRIVEIYTRNAKG
Ga0268265_120244171	3300028380	Switchgrass Rhizosphere	KRLFDSPFWKEKPAFAHFIKMAETGVPVSYGGSPTPAAGEVLNTHVIPKMIQRVLVENWEAAKALDECHKKIAEIYARNAKG
Ga0137415_103050922	3300028536	Vadose Zone Soil	WKSKPEFKHFVSMAETGRPVSYAGSPTPAAGEVLNTHVIPKMIQRVLVDNWEPPRALAECHRRIEEVYARNLKL
Ga0247820_110325612	3300028597	Soil	KRLFDSPFWKEKPAFAHFIKMAETGVAVSYAGSPTPAAGEVLNTHVIPKMIQRVLVENWEAAKALDECQKKIAEIYVRHAKG
Ga0268240_102049382	3300030496	Soil	FIHMAETGVPVSFAGSPTPAAGEVLNTHVIPKMVQRVLIENWEAAKALDECHKKIVEIYARYAKG
(restricted) Ga0255310_100089145	3300031197	Sandy Soil	YKRLFESPFWTSKPEFKHFIKMAETGVPVSYAGSPTAAAGEVLNTHVIPKMIQRVLVENWEAARALDECHKKIVEIYTRTAKG
Ga0310886_102416971	3300031562	Soil	AFAHFIKMAETGVAVSYAGSPTPAAGEVLNTHVIPKMIQRVLVENWEAAKALDECHKKIAEIYVRHAKG
Ga0307469_108818671	3300031720	Hardwood Forest Soil	RMAETGVPVSYAGSPTPAAGEVLNTQIIPKMIQRVLVENWEAAKALDECHKKIAEIYVRYEKG
Ga0307473_112603592	3300031820	Hardwood Forest Soil	MAETGVAVSYAGSPTPAAGEVLNTNVIPKMIQRVLVENWEASKALDECHKKIAEIYVRHAKG
Ga0307479_100533731	3300031962	Hardwood Forest Soil	FWKSKPEFKHFVSMAETGMPVSYAGSPTPAAGEVLNTHLIPKMIQRVLVDSWEPPRALEECHRRIEEVYARNLKL
Ga0310906_109685232	3300032013	Soil	WVPVYKRLFDSPFWKEKPAFKHFIRMAETGVPVSYAGSPTPAAGEVLNTNIIPKMVQRVLVDNWEPAKALDECHKKIAEIYARYEKG
Ga0315283_106723291	3300032164	Sediment	YKRLFDSPFWTGKPAFKHFIRMAETGVPVSYAGSPTPAAGEVLNTQVIPKTIQRVLVENWEPARALDECQKKITEIYVRYAKG
Ga0307471_1002834403	3300032180	Hardwood Forest Soil	VPVYKRLFDSPFWKEKPAFKHFIQMAETGVPVSYAGAPTPAAGEVLNTHLIPKMVQRVLVDNWEPAKALDECHKRIADVYARYEKA
Ga0364926_117525_355_543	3300033812	Sediment	MAETGVPVSYAGSPTPAAGEVLNTHVIGKMTQRVLVENWTAEKAVEEAHKAIAEIYARHAKG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters