Metagenome Family F069789

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069789
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	121 residues
Representative Sequence	LTWRRTALVAGWIATAGWGIYYLVAVAGNSSAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAVALADTSTPRNIASSVVAFVVGVVAFLWLAP
Number of Associated Samples	101
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.61 %
% of genes near scaffold ends (potentially truncated)	28.46 %
% of genes from short scaffolds (< 2000 bps)	74.80 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (19.512 % of family members)
Environment Ontology (ENVO)	Unclassified (45.528 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (66.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.32% β-sheet: 0.81% Coil/Unstructured: 33.87%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF02463	SMC_N	42.28
PF02881	SRP54_N	31.71
PF00563	EAL	3.25
PF00448	SRP54	1.63
PF14622	Ribonucleas_3_3	1.63
PF02978	SRP_SPB	1.63
PF00035	dsrm	0.81
PF02801	Ketoacyl-synt_C	0.81
PF08570	DUF1761	0.81
PF13231	PMT_2	0.81
PF16861	Carbam_trans_C	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	3.25
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	3.25
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	3.25
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	3.25
COG0541	Signal recognition particle GTPase	Intracellular trafficking, secretion, and vesicular transport [U]	1.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	65.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.63 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	64.23 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	53.66 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	53.66 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2197047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	617	Open in IMG/M
3300002886\|JGI25612J43240_1041155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	667	Open in IMG/M
3300004114\|Ga0062593_101048604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	841	Open in IMG/M
3300004463\|Ga0063356_100094008	All Organisms → cellular organisms → Bacteria	3224	Open in IMG/M
3300004463\|Ga0063356_100648810	All Organisms → cellular organisms → Bacteria	1439	Open in IMG/M
3300005293\|Ga0065715_10002247	All Organisms → cellular organisms → Bacteria	6454	Open in IMG/M
3300005330\|Ga0070690_100451088	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300005336\|Ga0070680_101295522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	630	Open in IMG/M
3300005341\|Ga0070691_10123104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1308	Open in IMG/M
3300005345\|Ga0070692_10007939	All Organisms → cellular organisms → Bacteria → Proteobacteria	4705	Open in IMG/M
3300005440\|Ga0070705_100029627	All Organisms → cellular organisms → Bacteria	3013	Open in IMG/M
3300005440\|Ga0070705_100115647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1722	Open in IMG/M
3300005440\|Ga0070705_100123895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1674	Open in IMG/M
3300005444\|Ga0070694_100303833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1223	Open in IMG/M
3300005444\|Ga0070694_100690008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	830	Open in IMG/M
3300005445\|Ga0070708_100329968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1437	Open in IMG/M
3300005445\|Ga0070708_101987206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	538	Open in IMG/M
3300005458\|Ga0070681_10799958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	860	Open in IMG/M
3300005467\|Ga0070706_100010307	All Organisms → cellular organisms → Bacteria	8682	Open in IMG/M
3300005467\|Ga0070706_100407173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1266	Open in IMG/M
3300005471\|Ga0070698_100180843	All Organisms → cellular organisms → Bacteria	2047	Open in IMG/M
3300005518\|Ga0070699_100802167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	862	Open in IMG/M
3300005530\|Ga0070679_101388275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	648	Open in IMG/M
3300005536\|Ga0070697_101421381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	619	Open in IMG/M
3300005545\|Ga0070695_100038042	All Organisms → cellular organisms → Bacteria	3034	Open in IMG/M
3300005545\|Ga0070695_100049073	All Organisms → cellular organisms → Bacteria	2701	Open in IMG/M
3300005564\|Ga0070664_100075935	All Organisms → cellular organisms → Bacteria	2887	Open in IMG/M
3300005615\|Ga0070702_100651221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	797	Open in IMG/M
3300005615\|Ga0070702_101211967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	609	Open in IMG/M
3300006049\|Ga0075417_10219569	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300006852\|Ga0075433_10222208	All Organisms → cellular organisms → Bacteria	1678	Open in IMG/M
3300006854\|Ga0075425_100138605	All Organisms → cellular organisms → Bacteria	2783	Open in IMG/M
3300006871\|Ga0075434_100204518	All Organisms → cellular organisms → Bacteria	1995	Open in IMG/M
3300006871\|Ga0075434_100585114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1135	Open in IMG/M
3300006881\|Ga0068865_102191283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	503	Open in IMG/M
3300006903\|Ga0075426_10361466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1068	Open in IMG/M
3300006904\|Ga0075424_100723581	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300006914\|Ga0075436_100137554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1716	Open in IMG/M
3300007255\|Ga0099791_10007429	All Organisms → cellular organisms → Bacteria	4533	Open in IMG/M
3300007265\|Ga0099794_10217258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	981	Open in IMG/M
3300009012\|Ga0066710_102235458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	797	Open in IMG/M
3300009012\|Ga0066710_102371158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	770	Open in IMG/M
3300009038\|Ga0099829_10937055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	718	Open in IMG/M
3300009089\|Ga0099828_10062281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3133	Open in IMG/M
3300009090\|Ga0099827_10014082	All Organisms → cellular organisms → Bacteria	5307	Open in IMG/M
3300009098\|Ga0105245_11710299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	681	Open in IMG/M
3300009147\|Ga0114129_10020778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	9331	Open in IMG/M
3300009148\|Ga0105243_10158863	All Organisms → cellular organisms → Bacteria	1947	Open in IMG/M
3300009156\|Ga0111538_11517483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	845	Open in IMG/M
3300009162\|Ga0075423_10562041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1201	Open in IMG/M
3300009162\|Ga0075423_12136805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	608	Open in IMG/M
3300009553\|Ga0105249_12871736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	553	Open in IMG/M
3300010373\|Ga0134128_10949012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	951	Open in IMG/M
3300010373\|Ga0134128_11014453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	917	Open in IMG/M
3300010399\|Ga0134127_10779928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1003	Open in IMG/M
3300011270\|Ga0137391_10660670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	871	Open in IMG/M
3300011271\|Ga0137393_11026781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	702	Open in IMG/M
3300012096\|Ga0137389_10112624	All Organisms → cellular organisms → Bacteria	2180	Open in IMG/M
3300012204\|Ga0137374_10011703	All Organisms → cellular organisms → Bacteria	10261	Open in IMG/M
3300012206\|Ga0137380_10955496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	734	Open in IMG/M
3300012209\|Ga0137379_11249844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	649	Open in IMG/M
3300012351\|Ga0137386_10832073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	663	Open in IMG/M
3300012355\|Ga0137369_10198924	All Organisms → cellular organisms → Bacteria	1550	Open in IMG/M
3300012358\|Ga0137368_10072219	All Organisms → cellular organisms → Bacteria	2789	Open in IMG/M
3300012907\|Ga0157283_10220811	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300012922\|Ga0137394_10008952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	7786	Open in IMG/M
3300012922\|Ga0137394_10434453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1118	Open in IMG/M
3300012925\|Ga0137419_10200330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1478	Open in IMG/M
3300014326\|Ga0157380_10365321	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300015371\|Ga0132258_10439731	All Organisms → cellular organisms → Bacteria	3249	Open in IMG/M
3300018027\|Ga0184605_10069654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1522	Open in IMG/M
3300018027\|Ga0184605_10300427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	727	Open in IMG/M
3300018028\|Ga0184608_10008315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3460	Open in IMG/M
3300018028\|Ga0184608_10404605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	592	Open in IMG/M
3300018052\|Ga0184638_1013917	All Organisms → cellular organisms → Bacteria	2769	Open in IMG/M
3300018071\|Ga0184618_10045898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1570	Open in IMG/M
3300018075\|Ga0184632_10124613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1134	Open in IMG/M
3300018076\|Ga0184609_10358133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	681	Open in IMG/M
3300018920\|Ga0190273_12159115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	522	Open in IMG/M
3300021080\|Ga0210382_10063906	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300021080\|Ga0210382_10314013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	690	Open in IMG/M
3300022534\|Ga0224452_1215758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	589	Open in IMG/M
3300022756\|Ga0222622_10044831	All Organisms → cellular organisms → Bacteria	2461	Open in IMG/M
3300025885\|Ga0207653_10000306	All Organisms → cellular organisms → Bacteria	27777	Open in IMG/M
3300025908\|Ga0207643_10337598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	944	Open in IMG/M
3300025910\|Ga0207684_10000094	All Organisms → cellular organisms → Bacteria	165810	Open in IMG/M
3300025912\|Ga0207707_11465107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	542	Open in IMG/M
3300025913\|Ga0207695_11088620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	679	Open in IMG/M
3300025917\|Ga0207660_10354501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1176	Open in IMG/M
3300025918\|Ga0207662_10161007	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300025922\|Ga0207646_10000226	All Organisms → cellular organisms → Bacteria	77176	Open in IMG/M
3300025922\|Ga0207646_10537393	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300025922\|Ga0207646_10614434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	975	Open in IMG/M
3300025923\|Ga0207681_10540515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	958	Open in IMG/M
3300025934\|Ga0207686_10677071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	818	Open in IMG/M
3300026075\|Ga0207708_10118348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2063	Open in IMG/M
3300026118\|Ga0207675_100281123	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300026285\|Ga0209438_1006408	All Organisms → cellular organisms → Bacteria	3994	Open in IMG/M
3300026320\|Ga0209131_1058081	All Organisms → cellular organisms → Bacteria	2155	Open in IMG/M
3300026944\|Ga0207570_1001103	All Organisms → cellular organisms → Bacteria	1547	Open in IMG/M
3300027655\|Ga0209388_1032271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1501	Open in IMG/M
3300027846\|Ga0209180_10792262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	508	Open in IMG/M
3300027873\|Ga0209814_10049592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1752	Open in IMG/M
3300027875\|Ga0209283_10358680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	955	Open in IMG/M
3300027882\|Ga0209590_10240726	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300028380\|Ga0268265_10402388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1266	Open in IMG/M
3300028715\|Ga0307313_10203302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	615	Open in IMG/M
3300028719\|Ga0307301_10096387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	936	Open in IMG/M
3300028793\|Ga0307299_10021574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2313	Open in IMG/M
3300028793\|Ga0307299_10274472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	633	Open in IMG/M
3300028796\|Ga0307287_10020462	All Organisms → cellular organisms → Bacteria	2302	Open in IMG/M
3300028811\|Ga0307292_10078779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1272	Open in IMG/M
3300028811\|Ga0307292_10506469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	518	Open in IMG/M
3300028814\|Ga0307302_10069910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1653	Open in IMG/M
3300028828\|Ga0307312_10702754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	670	Open in IMG/M
3300028828\|Ga0307312_10848272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	605	Open in IMG/M
3300028828\|Ga0307312_10912192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	582	Open in IMG/M
3300028878\|Ga0307278_10113675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1216	Open in IMG/M
3300028881\|Ga0307277_10290063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	725	Open in IMG/M
3300028884\|Ga0307308_10042842	All Organisms → cellular organisms → Bacteria	2124	Open in IMG/M
3300028885\|Ga0307304_10219819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	819	Open in IMG/M
3300031740\|Ga0307468_101473239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	629	Open in IMG/M
3300033412\|Ga0310810_10389880	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.42%
Host-Associated	Host-Associated	23.58%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.67%
Plants	Host-Associated → Plants	23.58%
Aquatic	Environmental → Aquatic	9.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.07%
Sediment	Environmental → Aquatic → Sediment	8.13%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.50%
Freshwater	Environmental → Aquatic → Freshwater	1.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.46%
Loam	Environmental → Terrestrial → Soil → Loam	25.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.13%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.88%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.15%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	25.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.13%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.88%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.81%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	19.51%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.57%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.06%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.06%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.44%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.63%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.63%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026944	Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G01K2-12 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_21970472	3300000033	Soil	LTWRRTALVAGWIAAAGWGIYYLVAVAGNSPAFVGNAVLHFIIGYIWARAIMTGQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAVALADTSTPRNIASSVAAFVVGTVAFLWLAP*
JGI25612J43240_10411551	3300002886	Grasslands Soil	LTWRRTALVAGWIATAGWGIYYLVAVASNSPAFVASAVLHFIIGYIWARAIMTGQLSAPLAIAGTLAAGVYTRLAFGFGTSEFLFTPIGPIVAVALADASTPRNIASSIL
Ga0062593_1010486042	3300004114	Soil	LTWRRTALVAGWIATAGWGIYYLVAVAGNSAAFVGSAVLHFIIGYIWARAIMTPELSAPLAIAGTVAAGVYTRLAFGFATSEFLFTPLGPIVAIALADTSTPRNIASSAVAFVIGIVAFLWLAP*
Ga0063356_1000940082	3300004463	Arabidopsis Thaliana Rhizosphere	LTWRRTALIAGWIASAGWGIYYLLTMASSSPAFVANAVLHFIIGYIWARGIMTPQLGAPLAMAGTIAAGVYTCLAIRFGTPEIAFAPLGPIVAVAFGDASTTRNVVSSVIAFALGFIALLWLAP*
Ga0063356_1006488102	3300004463	Arabidopsis Thaliana Rhizosphere	LTWRRVALVAGWIAAAGWGIYYLVAVAGNSSAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAIALADTSSPRNIASSVIAFIVGVVAFLWLAP*
Ga0065715_1000224711	3300005293	Miscanthus Rhizosphere	LTWRRTALVAGWIATAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAIALADTSSTRNIASSVVAFFVGVVAFLWLAP*
Ga0070690_1004510882	3300005330	Switchgrass Rhizosphere	LTWRRTALVAGWISTAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTDEFLFTPLGPIVAVALADTSSQRNIASSVVAFVIGVIAVLWLAP*
Ga0070680_1012955222	3300005336	Corn Rhizosphere	LTWRRTALVAGWISTAGWGIYYLVAVAGNSAAFVGNAFLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAVALADTSSQRNIASSVVAFVIGVIAVLWL
Ga0070691_101231042	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	LTWRRTALVAGWISTAGWGIYYLVAVAGNSAAFVGNAFLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAIALADTSSTRNIASSVVAFFVGVVAFLWLAP*
Ga0070692_100079394	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	LTWRRTALVAGWISTAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTDEFLFTPLGPIVAVALADTSSQRNIASSVVAFVIGVIAFLWLAP*
Ga0070705_1000296274	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	LTWRRTALVAGWISTAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTDEFLFTPLGPIVAVALADTSSQRNIASSVVAFVVGVIAVLWLAP*
Ga0070705_1001156472	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	LTWRRTALVAGWISTAGWGIYYLVAVAGNSAAFVGNAFLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAVALADTSSQRNIASSVVAFVIGVIAVLWLAP*
Ga0070705_1001238952	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	LTWRRTALAAGWIATAGWGVYYLIALAGSSPAFVADAVLHFIAGYVWARAIMTPQLSVPLALAGTFFAGVYMRIAISFATPEIVFAPLGPIVAVALADASSRRNILFSVIAFGLGLVAFLWLAP*
Ga0070694_1003038332	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	LTWRRTALVAGWISTAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAVALADTSSQRNIASSVVAFVIGVIAFLWLAP*
Ga0070694_1006900081	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	LTWRRTALVAGWIATAGWGIYYLVAVAGNSPAFVGNAVLHFIIGYIWARAIMTGQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAIALADTSTPRNIASSVVAFVVGLVAFLWLAP*
Ga0070708_1003299682	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LTWRRTALAAGWIATAGWGVYYLIALAGSSPAFVANAVLHFIAGYVWARAIMTPQLSVPLALAGTFFAGVYMRIAISFATPEIVFAPLGPIVAVALADASSRRNILFSVIA
Ga0070708_1019872061	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LTWRRTALAAGWIATAGWGVYYLIALAGSSPAFVANAVLHFITGYVWARAIMTPQLSVPLALAGTFFAGVYMRIAISFATPEIVFAPLGPIVAVALADASSRRNILLSVIAFGLGLVAFLWLAP*
Ga0070681_107999582	3300005458	Corn Rhizosphere	GWISTAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTDEFLFTPLGPIVAVALADTSSQRNIASSVVAFVIGVIAVLWLAP*
Ga0070706_1000103075	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LTWRRTALVAGWIATAGWGIYYLIALAGSSPAFVANAVLHFIGGYVWARAIMTPQLSVPLALAGTFFAGVYTRLAVSFATPEIVFAPLGPIVAIALADASSQRNILFSVIAFGLGLVAFLWLAP*
Ga0070706_1004071732	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LTWRRTALAAGWIATAGWGVYYLIALAGSSPAFVANAVLHFIAGYVWARAIMTPQLSVPLALAGTFFAGVYMRIAISFATPEIVFAPLGPIVAVALADASSRRNILFSVIAFGLGLVAFLWLAP*
Ga0070698_1001808432	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LTWRRTALAAGWIATAGWGVYYLIALAGSSPAFVANAVLHFITGYVWARAIMTPQLSVPLALAGTFFAGVYMRIAISFATPEIVFAPLGPIVAVALADASSRRNILFSVIAFGLGLVAFLWLAP*
Ga0070699_1008021672	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LTWRRTALVAGWIATAGWGIYYLVAVASSSTAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTDEFLFTPLGPIVAVALADTSSQRNIASSVVAFVIGVIAVLWLAP*
Ga0070679_1013882751	3300005530	Corn Rhizosphere	LTWRRTALVAGWISTAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTDEFLFTPLGPIVAVALADTSSQRNIASSVVAFVIGV
Ga0070697_1014213811	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LTWRRTALAAGWIATAGWGIYYLIALAGSSPAFVANAVLHFITGYVWARAIMTPQLSVPLALAGTFFAGVYMRIATSFATPEIVFAPLGPIVAVALADASSRRNILFSVI
Ga0070695_1000380422	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	LTWRRTALVAGWISTAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAVALADTSSQRNIASSVVAFVVGVIAVLWLAP*
Ga0070695_1000490734	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	LTWRRTALVAGWISTAGWGIYYLVAVAGNSAAFVGNAFLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAVALADTSSQRNIASSVVAFVIGVVAVLWLTP*
Ga0070664_1000759354	3300005564	Corn Rhizosphere	LTWRRTALVAGWIATAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTDEFLFTPLGPIVAIALSDASTPRNIASSVVAFVVGVVAFLWLAP*
Ga0070702_1006512211	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	LTWRRTALVAGWISTAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTDEFLFTPLGPIVAVALADTSSQ
Ga0070702_1012119671	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTDEFLFTPLGPIVAIALSDTSTPRNIASSVVAFVIGVVAFVWLAP*
Ga0075417_102195692	3300006049	Populus Rhizosphere	LTWRRTALAAGWIATAGWGIYYLIALAGSSPAFVANAVLHFVTGYIWARAIMTPQLSVPLALAGTFVAGVYTRLAIGFATPEIVFAPLGPIVAVALGDTSTARNIGSSVAAFVLGFIAFLWLAP*
Ga0075433_102222082	3300006852	Populus Rhizosphere	LSWRRTALIAGWIATAGWGIYYLVAVAGNSPAFVGNAVLHFIIGYIWARAIMAPQLSAPLAIAGTVAAGVYTRLAVGFGTSEFLFTPLGPIVAIALADTSTPRNIASSVVAFVIGVVAFLWLTP*
Ga0075425_1001386054	3300006854	Populus Rhizosphere	LTWRRTALAAGWIATAGWGIYYLIALAGSSPAFVANAVLHFITGYVWARAIMTPQLSVPLALAGTFFAGVYMRIATSFATPEIVFAPLGPIVAVALADASSRRNILFSVIAFGLGLVAFLWLAP*
Ga0075434_1002045182	3300006871	Populus Rhizosphere	LSWRRTALIAGWIATAGWGIYYLVAVAGNSPAFVGNAVLHFIIGYIWARAIMAPQLSAPLAIAGTVAAGVYTRLAVGFGTSEFLFTPLGPIVAIALADTSTPRNIASSVVAFVIGVVAFLWLAP*
Ga0075434_1005851142	3300006871	Populus Rhizosphere	LTWRRTALAAGWIATAGWGIYYLIALAGSSPAFVANAVLHFITGYVWARAIMTPQLSVPLALAGTFFAGVYVRIAISFATPEIVFAPLGPIVAVALADASSRRNILFSVIAFGLGLVAFLWLAP*
Ga0068865_1021912832	3300006881	Miscanthus Rhizosphere	TAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAIALADTSSTRNIASSVVAFFVGVVAFLWLAP*
Ga0075426_103614661	3300006903	Populus Rhizosphere	AGWIATAGWGIYYLIALAGSSPAFVANAVLHFITGYVWARAIMTPQLSVPLALAGTFFAGVYMRIAISFATPEIVFAPLGPIVAVALADASSRRNILFSVIAFGLGLVAFLWLAP*
Ga0075424_1007235812	3300006904	Populus Rhizosphere	LTWRRTALAAGWIATAGWGIYYLIALAGSAPAFVANAVLHFITGYVWARAIMTPQLSVPLALAGTFFAGVYMRIAISFATPEIVFAPLGPIVAVALADASSRRNILFSVIAFGLGLVAFLWLAP*
Ga0075436_1001375542	3300006914	Populus Rhizosphere	LTWRRTALAAGWIATAGWGIYYLIALAGSSPAFVANAVLHFITGYVWARAIMTPQLSVPLALAGTFFAGVYMRIAISFATPEIVFAPLGPIVAVALADASSRRNILFSVIAFGLGLVAFLWLAP*
Ga0099791_100074292	3300007255	Vadose Zone Soil	LTWRRTALAAGWIATAGWGIYYLIALAGSSPAFVANAVLHFITGYVWARAIMTPQLSVPLALAGTFFAGVYTRIAISFATPEIVFAPLGPIVAFALADVSSRRNILFSVIAFGLGLVAFLWLAP*
Ga0099794_102172582	3300007265	Vadose Zone Soil	LTWRRTALAAGWIATAGWGIYYLIALAGSSPAFVANAVLHFITGYVWARAIMTPQLSVPLALAGTFFAGVYMRIAISFATPEIVFAPLGPIVAVALADASSRRNILFSVIAFGLGLIAFLWLAP*
Ga0066710_1022354582	3300009012	Grasslands Soil	AAGWIATAGWGIYYLIALAGSSPVFVANAVLHFIIGYIWARAIMAPQLSAPLAIAGTVAAGVYTRLAFGFGTTEFLFTPLGPIVAVALADASTPRNIASSALAFVAGLLAFLWLAP
Ga0066710_1023711582	3300009012	Grasslands Soil	VTWRRTALAAGWIVTAGWGIYYLIALAGSSPAFVANAVLHFIIGYVWARAIMAPQLSAPLAIAGTVAAGVYSRLAFGFGTSEFLFTPIGPIVAFALADASTTRNIAS
Ga0099829_109370552	3300009038	Vadose Zone Soil	LTWRRTALAAGWIATAGWGIYYLIALAGSSPAFVANAVLHFITGYVWARAIMTPQLSVPLALAGTFFAGVYMRIAISFATPEIVFAPLGPIVAVALADASSRRNILYSVIAFGLGLVAFLWLAP*
Ga0099828_100622812	3300009089	Vadose Zone Soil	LTWRRTALIAGWIATAGWGIYYLIALAGSSPAFVANAVLHFITGYVWARAIMTPQLSVPLALAGTFFAGVYMRIAISFATPEIVFAPLGPIVAVALADASSRRNIL
Ga0099827_100140824	3300009090	Vadose Zone Soil	VTWRRTALAAGWIGTAGWGIYYLIALAGSSPAFVANAVLHFIIGYVWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTTEFLFTPLGPIVALALADASTTRNVASSVLAFVAGIVAFLWLAP*
Ga0105245_117102992	3300009098	Miscanthus Rhizosphere	LTWRRTALVAGWIATAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAVALADTSSQRNIASSVVAFVIGVIAFLWLAP*
Ga0114129_100207786	3300009147	Populus Rhizosphere	LTWRRIALAAGWIATAGWGIYYLIALAGSSPAFVANAVLHFVTGYIWARAIMTPQLSVPLALAGTFVAGVYTRLAIGFATPEIVFAPLGPIVAVALGDTSTARNIGSSVAAFVLGFIAFLWLAP*
Ga0105243_101588631	3300009148	Miscanthus Rhizosphere	PLTWRRTALVAGWIATAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTDEFLFTPLGPIVAVALADTSSQRNIASSVVAFVIGVIAVLWLAP*
Ga0111538_115174832	3300009156	Populus Rhizosphere	VAGWIATAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTDEFLFTPLGPIVAIALSDTSTPRNIASSVVAFVIGVVAFVWLAP*
Ga0075423_105620412	3300009162	Populus Rhizosphere	LTWRRTALAAGWIATAGWGIYYLIALAGSSPAFVANAILHFITGYVWARAIMTPQLSVPLALAGTFFAGVYMRIAVSFATPEIVFAPLGPIVAVALADASSRRNILFSVIAFGLGLVAFLWLAP*
Ga0075423_121368052	3300009162	Populus Rhizosphere	LTWRRTALVAGWIATAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTDEFLFTPLGPIVAIALSDTSTPRNIASSVVAFVIGVVAFVWLAP*
Ga0105249_128717362	3300009553	Switchgrass Rhizosphere	GWISTAGWGIYYLVAVAGNSAAFVGNAFLHFIIGYIWPRAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAVALADTSSQRNIASSVVAFVIGVVAVLWLTP*
Ga0134128_109490122	3300010373	Terrestrial Soil	VAGWISTAGWGIYYLVSVAGDSLAIIGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTDEFLFTPLGPIVAVALADTSSQRNIASSVVAFVIGVIAVLWLAP*
Ga0134128_110144532	3300010373	Terrestrial Soil	LTWRRTALVAGWIATAGWGIYYLVAVAGNSSAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAVALADTSTPRNIASSVVAFVVGVVAFLWLAP*
Ga0134127_107799282	3300010399	Terrestrial Soil	WGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAVALADTSSQRNIASSVVAFVIGVIAFLWLAP*
Ga0137391_106606701	3300011270	Vadose Zone Soil	LTWRRTALAAGWIATAGWGIYYLIALAGSSPAFVANAVLHFITGYVWARAIMTPQLSVPLALAGTFFAGVYTRIAISFATPEIVFAPLGPIVAVALADASSRRNILFSVIAFGLG
Ga0137393_110267812	3300011271	Vadose Zone Soil	LTWRRTALAAGWIATAGWGIYYLIALAGSSPAFVANAVLHFITGYVWARAIMTPQLSVPLALAGTFFAGVYTRIAISFATPEIVFAPLGPIVAVALADASSRRNILFSVIAFGLGLVAFLWLAP*
Ga0137389_101126242	3300012096	Vadose Zone Soil	LTWRRTALVAGWIATAGWGIYYLIALAGSSPAFVANAVLHFITGYVWARAIMTPQLSVPLALAGTFFAGVYMRIAISFATPEIVFAPLGPIVAVALADASSRRNILFSVIAFGLGLVAFLWLAP*
Ga0137374_1001170311	3300012204	Vadose Zone Soil	LTWRRTALVAGWIATAGWGIYYLVAVAGSSPAFVASAVLHFIIGYVWARAIMTPELSAPLAITGTIAAGVYTRLAFGFGTTEFLFTPLGPIVAVALADTSTPRNIASSVLAFVLGFIAFLWLAP*
Ga0137380_109554962	3300012206	Vadose Zone Soil	VTWRRTALAAGWIVTAGWGIYYLIALAGSSPAFVANAVLHFIIGYVWARAIMTPQLSAPLAIAGTVAAGVYARLAFGFGTSEFLFTPIGPIVAFALADASTTRNIASSVLAFVAGVATFLWLAP*
Ga0137379_112498442	3300012209	Vadose Zone Soil	WIATAGWGIYYLIALAGSSPVFVANAVLHFIIGYIWARAIMAPQLSAPLAIAGTVAAGIYTRLAFGFGTTEFLFTPLGPIVAVALADVSTPRNIASSAIAFVAGLLAFLWLAP*
Ga0137386_108320732	3300012351	Vadose Zone Soil	LAGGWIATAGWGIYYLIALAGSSSAFVANAVLHFIIGYIWARAIMALQLSAPLAIAGTVAAGIYTRLAFGFGTTEFLFTPLGPIVAVALADVSTPRNIASSAIAFVAGLLAFLWLAP*
Ga0137369_101989242	3300012355	Vadose Zone Soil	LTWRRTALVAGWIATAGWGIYYLVAVAGSSPAFVASAVLHFIIGYVWARAIMTPELSAPLAITGTVAAGVYTRLAFGFGTTEFLFTPLGPIVAVALADTSTPRNIASSVLAFVLGFIAFLWLAP*
Ga0137368_100722192	3300012358	Vadose Zone Soil	LTWRRTALVAGWIATAGWGIYYLVAVAGSSPAFGASAVLHFIIGYVWARAIMTPELSAPLAITGTIAAGVYTRLAFGFGTTEFLFTPLGPIVAVALADTSTPRNIASSVLAFVLGFIAFLWLAP*
Ga0157283_102208113	3300012907	Soil	LTWRRTALVAGWIATAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTDEFLFTALGPIVAIALSDASMPRNIASSVV
Ga0137394_100089523	3300012922	Vadose Zone Soil	VTWRRTALIAGWIASAGWGIYYLVVLAGSSPAFVANAVLHFITGYVWGRAIMAPQLSVPLALAGTVAAGVYTRLALGFNTSEFLFTPIGPIVAVALSDTSSARNVAYSVAAFVIGFVAFLWLAP*
Ga0137394_104344532	3300012922	Vadose Zone Soil	LTWRRTALAAGWIATAGWGIYYLIALAGSSPAFVADAVLHFIIGYIWARAIMAPQLSAPLALAGTVSAGVYTRLAFGFGTTEFLFGVLGPIVAVALADSSSRRNILSSAAAFGLGFVAFFWLAP*
Ga0137419_102003302	3300012925	Vadose Zone Soil	LTWRRTALGAGWIATAGWGIYYLVVLAGSNPAFVANAVVHFITGYVWARAIMTPRLSVPLALAGTFAAGAYTRVAIGFATPEFLFAPLGPIVAIALGDASSTRNIVSSVIAFVVGFIAFLWLAP*
Ga0157380_103653212	3300014326	Switchgrass Rhizosphere	LTWRRTALVAGWIATAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTDEFLFTPLGPIVAVALADTSSQRNIASSVVAFVIGAVAVLWLTP*
Ga0132258_104397314	3300015371	Arabidopsis Rhizosphere	MTWRRVAFVAGWIATAGWGIYYLVAVAGSSPAFVADAVLHFIIGYVWARAIMTPQLSVPLALAGTVAAGVYTRLAVGFGTPEIVFAPLGPIVAVALGDRSNTRNIVSSVIAFSVGLVSVLWLAP*
Ga0184605_100696542	3300018027	Groundwater Sediment	LTWRRTALAAGWIAAAGWGIYYLIALAGSSPTFVADAVLHFIIGYVWARAIMAPQLSAPLALAGTVAAGVYTRLAFGFGTTEFLFGVLGPIVAVALADSSSRRNILSSVAAFGLGLVAFLWLAP
Ga0184605_103004271	3300018027	Groundwater Sediment	LTWRRTALIAGWIATAGWGIYYLVAVASNSPAFVGSAVLHFIIGYIWARAIMAPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAVALADTSTPRNIASSVVAFVVGLVAFLWLAP
Ga0184608_100083152	3300018028	Groundwater Sediment	LTWRRTALVAGWIAAAGWGIYYLVAVAGNSPAFVGSAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFETSEFLFTPLGPIVAVALADASTPRNIASSVLAFVAGFAAFLWLAP
Ga0184608_104046052	3300018028	Groundwater Sediment	LTWRRTALVAGWIATAGWGIYYLVAVASNSPAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAIALADTSTP
Ga0184638_10139173	3300018052	Groundwater Sediment	LTWRRTALVAGWIATAGWGIYYLVAVAGNSPAFVGNAVLHFIIGYIWARAIMAPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAVALADTSTPRNIASSAVAFVVGLVAFLWLAP
Ga0184618_100458981	3300018071	Groundwater Sediment	LTWRRTALVAGWIATAGWGIYYLVAVAGNSSAFVGNAVLHFIIGYIWARAIMTGQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAFALADTSTPRNIASSVVAFVVGVVAFLWLAP
Ga0184632_101246132	3300018075	Groundwater Sediment	LTWRRTALVAGWIAAAGWGIYYLVAVAGNSPAFVGNAVLHFIIGYIWARAIMAPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAVALADTSTPRNIASSVVAFVAGLVAFLWLAP
Ga0184609_103581332	3300018076	Groundwater Sediment	LTWRRTALVAGWIATAGWGIYYLVAVAGNSPAFVGSAVLHFIIGYIWARAIMAPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAVALADTSTPRNIASSVVAFVIGVVAFLWLAP
Ga0190273_121591152	3300018920	Soil	LTWRRTALVAGWIATAGWGIYYLVAVAGNSPAFVASAVLHFIIGYVWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAMALADTSSPRNIASSVVAFVVG
Ga0210382_100639062	3300021080	Groundwater Sediment	VALVAGWIATAGWGIYYLVAVAGNSSAFVGNAVLHFIIGYIWARAITAPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAVALADTSTTRNIASSVVAFIVGLVAFLWLAP
Ga0210382_103140132	3300021080	Groundwater Sediment	LTWRRTALVAGWIATAGWGIYYLVAVAGNSPAFVGSAVLHFVIGYIWARAIMTGQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAFALADTSTPRNIASSVVAFVVGLVAFLWLAP
Ga0224452_12157581	3300022534	Groundwater Sediment	WIATAGWGIYYLVAVAGNSPAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAVALADASTPRNIASSVLAFVAGFAAFLWLAP
Ga0222622_100448312	3300022756	Groundwater Sediment	LTWRRTALVAGWLATAGWGIYYLVAVAGNSAAFVANAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAIALADTSNRRNIASSVVAFVVGVVAFFWLAP
Ga0207653_1000030622	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	LTWRRTALVAGWIATAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAIALADTSSTRNIASSVVAFFVGVVAFLWLAP
Ga0207643_103375981	3300025908	Miscanthus Rhizosphere	TALVAGWISTAGWGIYYLVAVAGNSAAFVGNAFLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAVALADTSSQRNIASSVVAFVIGVVAVLWLTP
Ga0207684_10000094100	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LTWRRTALVAGWIATAGWGIYYLIALAGSSPAFVANAVLHFIGGYVWARAIMTPQLSVPLALAGTFFAGVYTRLAVSFATPEIVFAPLGPIVAIALADASSQRNILFSVIAFGLGLVAFLWLAP
Ga0207707_114651071	3300025912	Corn Rhizosphere	LTWRRTALVAGWISTAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTDEFLFTPLGPIVAVALADTSSQRNIASSVVAFVIGVIAVLWLAP
Ga0207695_110886202	3300025913	Corn Rhizosphere	LTWRRTALVAGWIATAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTDEFLFTPLGPIVAVALADTSSQRNIASSVVAFVVGVIAVLWLAP
Ga0207660_103545012	3300025917	Corn Rhizosphere	LTWRRTALVAGWISTAGWGIYYLVAVAGNSAAFVGNAFLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAVALADTSSQRNIASSVVAFVIGVVAVLWLTP
Ga0207662_101610072	3300025918	Switchgrass Rhizosphere	LTWRRTALVAGWISTAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAVALADTSSQRNIASSVVAFVIGVIAFLWLAP
Ga0207646_1000022649	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LTWRRTALAAGWIATAGWGVYYLIALAGSSPAFVANAVLHFIAGYVWARAIMTPQLSVPLALAGTFFAGVYMRIAISFATPEIVFAPLGPIVAVALADASSRRNILFSVIAFGLGLVAFLWLAP
Ga0207646_105373932	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LTWRRTALVAGWISTAGWGIYYLVSVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAIALADTSSTRNIASSVVAFFVGVVAFLWLAP
Ga0207646_106144342	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LTWRRTALAAGWIATAGWGIYYLIALAGSSPAFVANAVLHFIGGYVWARAIMTPQLSVPLAVAGTFFAGVYTRLAISFATPEIVFAPLGPIVAVALADASSRRNILFSVIAFGLGIVAFLWLAP
Ga0207681_105405151	3300025923	Switchgrass Rhizosphere	TWRRTALVAGWISTAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTDEFLFTPLGPIVAVALADTSSQRNIASSVVAFVIGVIAVLWLAP
Ga0207686_106770712	3300025934	Miscanthus Rhizosphere	LTWRRTALVAGWISTAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAIALADTSSTRNIASSVVAFFVGVVAFLWLAP
Ga0207708_101183482	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	LTWRRTALVAGWISTAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPVAIAGTVAAGVYTRLAFGFGTDEFLFTPLGPIVAIALSDASTPRNIASSVVAFVVGVVAFLWLAP
Ga0207675_1002811232	3300026118	Switchgrass Rhizosphere	LTWRRTALVAGWIATAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLATAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAVALADTSSQRNIASSVVAFVIGVIAFLWLAP
Ga0209438_10064083	3300026285	Grasslands Soil	LTWRRTALVAGWIATAGWGIYYLVAVASNSPAFVASAVLHFIIGYIWARAIMTGQLSAPLAIAGTLAAGVYTRLAFGFGTSEFLFTPIGPIVAVALADASTPRNIASSILAFVLGVVAFLWLTP
Ga0209131_10580812	3300026320	Grasslands Soil	LTWRRTALVAGWIATAGWGIYYLVAVASNSPAFVASAVLHFIIGYIWARAIMTGQLSAPLAIAGTLAAGVYTRLAFGFGTSEFLFTPIGPIVAVALADASTPRNIASSILAFVLGAVAFLWLTP
Ga0207570_10011032	3300026944	Soil	LTWRRTALVAGWIATAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAVALADTSSQRNIASSVVAFVIGVIAFLWLAP
Ga0209388_10322712	3300027655	Vadose Zone Soil	LTWRRTALAAGWIATAGWGIYYLIALAGSSPAFVANAVLHFITGYVWARAIMTPQLSVPLALAGTFFAGVYTRIAISFATPEIVFAPLGPIVAFALADVSSRRNILFSVIAFGLGLVAFLWLAP
Ga0209180_107922621	3300027846	Vadose Zone Soil	GWGIYYLIALAGSSPAFVANAVLHFITGYVWARAIMTPQLSVPLALAGTFFAGVYMRIAISFATPEIVFAPLGPIVAVALADASSRRNILYSVIAFGLGLVAFLWLAP
Ga0209814_100495922	3300027873	Populus Rhizosphere	LTWRRTALAAGWIATAGWGIYYLIALAGSSPAFVANAVLHFVTGYIWARAIMTPQLSVPLALAGTFVAGVYTRLAIGFATPEIVFAPLGPIVAVALGDTSTARNIGSSVAAFVLGFIAFLWLAP
Ga0209283_103586802	3300027875	Vadose Zone Soil	VTWRRTALVAGWIATAGWGIYYLIALAGSSPAFVASAVLHFITGYVWARAIMTPQLSVPLALAGTFFAGVYMRIAISFAMPEIVFAPLGPIVAVALADASSRRNILFSVIAFGLGLVAFLWLAP
Ga0209590_102407262	3300027882	Vadose Zone Soil	VTWRRTALAAGWIGTAGWGIYYLIALAGSSPAFVANAVLHFIIGYVWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTTEFLFTPLGPIVALALADASTTRNVASSVLAFVAGIVAFLWLAP
Ga0268265_104023882	3300028380	Switchgrass Rhizosphere	LTWRRTALVAGWIATAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTDEFLFTPLGPIVAVALADTSSQRNIASSVVAFVIGVIAVLWLAP
Ga0307313_102033021	3300028715	Soil	LTWRRTALVAGWIATAGWGIYYLVAVAGNSPAFVGSAVLHFIIGYIWARAIMTGQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAFALADTSTPRNIASSVVAFVVGL
Ga0307301_100963871	3300028719	Soil	LTWRRTALVAGWIATAGWGIYYLVAVAGNSSAFVGNAVLHFIIGYIWARAIMTGQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAIALADTSTP
Ga0307299_100215742	3300028793	Soil	LTWRRTALVAGWIAAAGWGIYYLVAVAGNSPAFVGSAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAVALADASTPRNIASSVLAFVAGFAAFLWLAP
Ga0307299_102744722	3300028793	Soil	LTWRRTALVAGWIATAGWGIYYLVAVAGNSPAFVGNAVLHFIIGYIWARAIMTGQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAIALADTSTPRNIASSVVAFVIGIVAFLWLAP
Ga0307287_100204622	3300028796	Soil	LTWRRTALVAGWIATAGWGIYYLVAVAGNSSAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAIALADTSSPRNIASSVIAFVIGVVAFLWLAP
Ga0307292_100787793	3300028811	Soil	LTWRRTALVAGWIATAGWGIYYLVAVAGNSPAFVGSAVLHFIIGYIWARAIMAPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAFALADTSTPRNIASSVVAFVVGLVAFLWLAP
Ga0307292_105064692	3300028811	Soil	VALVAGWIATAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYILARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAIALADTSSPRNIASSVIAFVIGVVAFLWLAP
Ga0307302_100699103	3300028814	Soil	LTWRRTALVAGWIATAGWGIYYLVAVAGNSSAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAVALADTSTARNIASSVVAFVVGLVAFIWLAP
Ga0307312_107027543	3300028828	Soil	TAGWGIYYLVAVAGNSSAFVGIAVLHFIIGYIWARAITAPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVALALADLSSARNIASSVVAFVVGVVAFLWLAP
Ga0307312_108482721	3300028828	Soil	ASPLTWRRTALVAGWIATAGWGIYYLVAVAGNSPAFVGSAVLHFIIGYIWARAIMAPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAFALADTSTPRNIASSVVAFVVGLVAFLWLAP
Ga0307312_109121922	3300028828	Soil	LTWRRTALVAGWIATAGWGIYYLVAVASNSSAFVGNAVLHFIIGYIWARAIMTGQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAVALADTSTPRNIASSLVAFVVGLVAFLWLAP
Ga0307278_101136753	3300028878	Soil	TAGWGIYYLVAVAGNSPAFVGSAVLHFIIGYIWARTIMAPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAFALADTSTPRNIASSVVAFVVGLVAFLWLAP
Ga0307277_102900632	3300028881	Soil	LTWRRTALVAGWIATAGWGIYYLVAVASNSPAFVGNAVLHFIIGYIWARAIMTGQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAVALADTSTPRNIASSLDAFVVGLVAFLWLAP
Ga0307308_100428422	3300028884	Soil	LTWRRTALGAGWIAAAGWGIYYLIVLAGSSPTFVADAVLHFIIGYIWARAIMTPQLSAPLALAGTVAAGVYTRLAFGFGTTEFLFGVLGPIVAIALADASSRRNILSSMAAFALGVVAFLWLTP
Ga0307304_102198191	3300028885	Soil	LTWRRTALVAGWIATAGWGIYYLVAVAGNSPAFVGSAVLHFIIGYIWARAIMTGQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAFALADTSTPRNIASSVVAFVVGLVAFLWLAP
Ga0307468_1014732392	3300031740	Hardwood Forest Soil	LTWRRIALVAGWLATAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTSEFLFTPLGPIVAIALADTSSTRNIASSVVAFVIGVVAFLWLAP
Ga0310810_103898802	3300033412	Soil	LTWRRTALVAGWIATAGWGIYYLVAVAGNSAAFVGNAVLHFIIGYIWARAIMTPQLSAPLAIAGTVAAGVYTRLAFGFGTDEFLFTPLGPIVAIALSDASTPRNIASSVVAFVVGVVAFLWLAP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F069789

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences