Metagenome / Metatranscriptome Family F069763

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069763
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	44 residues
Representative Sequence	MLVDNFSQWQANAGRVQSIDLQYSRQVVVNPDTSAGTTAARTK
Number of Associated Samples	101
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.19 %
% of genes from short scaffolds (< 2000 bps)	88.62 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.187 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (36.585 % of family members)
Environment Ontology (ENVO)	Unclassified (32.520 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.285 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.49% β-sheet: 0.00% Coil/Unstructured: 84.51%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF02491	SHS2_FTSA	50.41
PF14450	FtsA	35.77
PF12327	FtsZ_C	2.44
PF00091	Tubulin	2.44
PF13263	PHP_C	1.63
PF03932	CutC	0.81
PF06277	EutA	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG3142	Copper homeostasis protein CutC	Inorganic ion transport and metabolism [P]	0.81
COG4819	Ethanolamine utilization protein EutA, possible chaperonin	Amino acid transport and metabolism [E]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.19 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.19 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.19 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	41.46 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	37.40 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.25 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.40 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.25 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.40 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.25 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.40 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.44 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.40 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.81 %
Unclassified	root	N/A	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001137\|JGI12637J13337_1017485	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300002914\|JGI25617J43924_10166949	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	743	Open in IMG/M
3300004091\|Ga0062387_100272319	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300005174\|Ga0066680_10284800	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300005179\|Ga0066684_10205773	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300005446\|Ga0066686_10652061	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	715	Open in IMG/M
3300005554\|Ga0066661_10366572	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300005568\|Ga0066703_10399920	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300005574\|Ga0066694_10003269	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6418	Open in IMG/M
3300005950\|Ga0066787_10071484	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	700	Open in IMG/M
3300006034\|Ga0066656_10021949	All Organisms → cellular organisms → Bacteria	3432	Open in IMG/M
3300006102\|Ga0075015_100452249	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300006893\|Ga0073928_10419244	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300007255\|Ga0099791_10468486	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300007258\|Ga0099793_10530960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300007265\|Ga0099794_10705226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300009038\|Ga0099829_11442791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300009088\|Ga0099830_10208639	All Organisms → cellular organisms → Bacteria	1532	Open in IMG/M
3300009088\|Ga0099830_10887060	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300009088\|Ga0099830_11305208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300009089\|Ga0099828_10259461	All Organisms → cellular organisms → Bacteria	1559	Open in IMG/M
3300009089\|Ga0099828_10979212	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300009089\|Ga0099828_11331069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300009090\|Ga0099827_11195486	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300009090\|Ga0099827_11595781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300009137\|Ga0066709_103835370	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300010046\|Ga0126384_12101589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300010320\|Ga0134109_10027076	All Organisms → cellular organisms → Bacteria	1799	Open in IMG/M
3300010322\|Ga0134084_10382245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300010359\|Ga0126376_12970708	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300010361\|Ga0126378_11196488	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300010361\|Ga0126378_12787095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300010361\|Ga0126378_12838587	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300010362\|Ga0126377_12132428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300010364\|Ga0134066_10001314	All Organisms → cellular organisms → Bacteria	3941	Open in IMG/M
3300010376\|Ga0126381_103948617	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300011120\|Ga0150983_11027506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300011120\|Ga0150983_13292692	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300011270\|Ga0137391_10294053	All Organisms → cellular organisms → Bacteria	1402	Open in IMG/M
3300011271\|Ga0137393_10721324	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300012189\|Ga0137388_10415889	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300012189\|Ga0137388_12015076	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300012199\|Ga0137383_11010384	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300012201\|Ga0137365_10390654	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300012202\|Ga0137363_10924890	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300012203\|Ga0137399_10420581	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300012203\|Ga0137399_10956118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300012203\|Ga0137399_11033431	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300012203\|Ga0137399_11037530	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300012207\|Ga0137381_11439778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300012351\|Ga0137386_10799213	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300012400\|Ga0134048_1161082	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300012582\|Ga0137358_10109134	All Organisms → cellular organisms → Bacteria	1877	Open in IMG/M
3300012582\|Ga0137358_10511386	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300012685\|Ga0137397_10640637	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300012917\|Ga0137395_10923179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300012925\|Ga0137419_11224209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300012927\|Ga0137416_10855158	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300012927\|Ga0137416_10904655	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300012929\|Ga0137404_11205920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300012930\|Ga0137407_10790014	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300012977\|Ga0134087_10028040	All Organisms → cellular organisms → Bacteria	2110	Open in IMG/M
3300014166\|Ga0134079_10180954	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300015241\|Ga0137418_11236226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300015245\|Ga0137409_10221121	All Organisms → cellular organisms → Bacteria	1695	Open in IMG/M
3300017657\|Ga0134074_1186576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300017659\|Ga0134083_10266506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300017943\|Ga0187819_10661806	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300017947\|Ga0187785_10560300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300018431\|Ga0066655_10000328	All Organisms → cellular organisms → Bacteria	15116	Open in IMG/M
3300018468\|Ga0066662_12467260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300019275\|Ga0187798_1553288	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300020579\|Ga0210407_10629134	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300020579\|Ga0210407_11111785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300020580\|Ga0210403_10201025	All Organisms → cellular organisms → Bacteria	1635	Open in IMG/M
3300020580\|Ga0210403_10693743	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300021088\|Ga0210404_10191112	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300021180\|Ga0210396_11719427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300021406\|Ga0210386_11602166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300021420\|Ga0210394_11083976	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300021475\|Ga0210392_11190219	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300021478\|Ga0210402_10149828	All Organisms → cellular organisms → Bacteria	2124	Open in IMG/M
3300021559\|Ga0210409_10955696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300022508\|Ga0222728_1063315	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300022722\|Ga0242657_1076094	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300024330\|Ga0137417_1116314	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300024330\|Ga0137417_1233941	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300024330\|Ga0137417_1299562	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300026214\|Ga0209838_1064718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300026310\|Ga0209239_1110136	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300026310\|Ga0209239_1325111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300026313\|Ga0209761_1342829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300026314\|Ga0209268_1007526	All Organisms → cellular organisms → Bacteria	4598	Open in IMG/M
3300026334\|Ga0209377_1011444	All Organisms → cellular organisms → Bacteria	4927	Open in IMG/M
3300026334\|Ga0209377_1029038	All Organisms → cellular organisms → Bacteria	2675	Open in IMG/M
3300026334\|Ga0209377_1223565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300026359\|Ga0257163_1010105	All Organisms → cellular organisms → Bacteria	1414	Open in IMG/M
3300026497\|Ga0257164_1089286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300026527\|Ga0209059_1065066	All Organisms → cellular organisms → Bacteria	1578	Open in IMG/M
3300026551\|Ga0209648_10622664	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300026552\|Ga0209577_10798347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300026557\|Ga0179587_10047079	All Organisms → cellular organisms → Bacteria → Acidobacteria	2466	Open in IMG/M
3300027587\|Ga0209220_1153846	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300027643\|Ga0209076_1155442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300027655\|Ga0209388_1213981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300027681\|Ga0208991_1179354	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300027684\|Ga0209626_1116989	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300027867\|Ga0209167_10289058	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300027875\|Ga0209283_10324373	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300027882\|Ga0209590_10249282	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300027895\|Ga0209624_10581770	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300028536\|Ga0137415_10423579	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300028798\|Ga0302222_10026066	All Organisms → cellular organisms → Bacteria	2394	Open in IMG/M
3300028906\|Ga0308309_10612226	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300030617\|Ga0311356_10738850	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300031715\|Ga0307476_10955338	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300031740\|Ga0307468_101567149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300031754\|Ga0307475_10697731	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300031962\|Ga0307479_10035203	All Organisms → cellular organisms → Bacteria	4786	Open in IMG/M
3300031962\|Ga0307479_10419565	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300032008\|Ga0318562_10058816	All Organisms → cellular organisms → Bacteria	2123	Open in IMG/M
3300032043\|Ga0318556_10076435	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.94%
Aquatic	Environmental → Aquatic	4.06%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.31%
Freshwater	Environmental → Aquatic → Freshwater	2.44%
Peat	Environmental → Terrestrial → Peat	1.63%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.81%
Sediment	Environmental → Aquatic → Sediment	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.55%
Loam	Environmental → Terrestrial → Soil → Loam	6.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.25%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.44%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.63%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	49.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.07%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.63%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.63%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.63%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.81%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	36.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.06%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.63%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.63%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.63%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.81%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.81%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.81%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.81%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.81%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001137	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12637J13337_10174851	3300001137	Forest Soil	NGDFAAKYRMLVENFSQWQANAGHIRSVDLQYSRQVILNPDSSAGVAVAKAR*
JGI25617J43924_101669491	3300002914	Grasslands Soil	FKMLVDNFSQWQANAGHVQSIDLQYSRQVVVNPDTSSGVTTARKK*
Ga0062387_1002723191	3300004091	Bog Forest Soil	VENFAQWQANAGRVRSVDLQYARQVVINPDASASSTVARAK*
Ga0066680_102848002	3300005174	Soil	KMLVDNFSQWQANAGRVQSIDLQYSRQVVVNPDASAGTAAARTK*
Ga0066684_102057732	3300005179	Soil	KMLIDNFSQWQANAGRVQSIDLQYSRQVVVNPDTSPGATAARTK*
Ga0066686_106520611	3300005446	Soil	IHFGAGEFTSKYKMLVDNFSQWQANTGRVQSIDLQYMRQVVVNPDTSAGAAARKTR*
Ga0066661_103665722	3300005554	Soil	QWQANAGRVQSIDLQYSRQVVVNPDASAGTAAARTK*
Ga0066703_103999201	3300005568	Soil	VDNFAQWQAHTGHVQSIDLQYARQVVVNPDSSAGTVAARTK*
Ga0066694_100032691	3300005574	Soil	QWQAHTGHVQSIDLQYARQVVVNPDSSAGTVAARTK*
Ga0066787_100714842	3300005950	Soil	FSQWQASAGRVQSIDLQYSRQVILNPDSSAGVAVAKAR*
Ga0066656_100219494	3300006034	Soil	MLVDNFSQWQANTGRVQSIDLQYMRQVVVNPDTSTGAAARKTR*
Ga0075015_1004522491	3300006102	Watersheds	KYKMLVDNFSQWQANAGRVQSIDLQYTRQVVVNPDTSSVTATARAK*
Ga0073928_104192441	3300006893	Iron-Sulfur Acid Spring	RMLVENFSQWQANAGRVRSIDLQYSRQVILNPDSSAGVAVAKAR*
Ga0099791_104684862	3300007255	Vadose Zone Soil	IDNFSQWQANAGRVQSIDLQYSRQVVVNPDTSAGTTTARKR*
Ga0099793_105309602	3300007258	Vadose Zone Soil	SSEFTGKYKMLVDNFSQWQANAGRVQSIDLQYSRQVVVNPDTSAGTTAARTK*
Ga0099794_107052262	3300007265	Vadose Zone Soil	SSEFTGKYKMLVDNFSQWQANAGHVQSIDLQYSRQVVVNPDPSAGTTTARKK*
Ga0099829_114427911	3300009038	Vadose Zone Soil	NFSQWQANAGHVQSIDLQYSRQVVVNPDSSAGTASARTR*
Ga0099830_102086391	3300009088	Vadose Zone Soil	MLVDNFSQWQANTGRVQSIDLQYMRQVVVNPDTSAGTAAKKTK*
Ga0099830_108870602	3300009088	Vadose Zone Soil	SSEFTGKFKMLVDNFSQWQANAGHVQSIDLQYSRQVVVNPDTSAGTTTARKK*
Ga0099830_113052082	3300009088	Vadose Zone Soil	YKMLVDNFLQWQANAGRVQSIDLQYSRQVVVNPDTSAGATAARTK*
Ga0099828_102594611	3300009089	Vadose Zone Soil	NFAQWQANTGRVRSIDLQYSRQVVVNPDTSAGTSVARRK*
Ga0099828_109792121	3300009089	Vadose Zone Soil	NFTQWQANAGRVQSIDLQYSRQVVVNPDTSSGTVATKTK*
Ga0099828_113310692	3300009089	Vadose Zone Soil	KYKMLVDNFSQWQANAGRVQSIDLQYARQVVVNPDSNAGTASIRKK*
Ga0099827_111954861	3300009090	Vadose Zone Soil	FSQWQANAGRVQSIDLQYSRQVVVNPDASAGTAAARTK*
Ga0099827_115957812	3300009090	Vadose Zone Soil	FGASEFTGKYKMLVDNFSQWQASAGRVQSIDLQYSRQVVVNPDTSAGTTTARTK*
Ga0066709_1038353701	3300009137	Grasslands Soil	QWQANTGRVQSIDLQYSRQVVVNPDTSAGTSVARRK*
Ga0126384_121015891	3300010046	Tropical Forest Soil	WQASNGRVRSIDLQYSRQVILNTDTSAATTVARAR*
Ga0134109_100270761	3300010320	Grasslands Soil	NFSQWQAHTGRVQSIDLQYTRQVVVNPDTSAGTVAAKIK*
Ga0134084_103822452	3300010322	Grasslands Soil	HFGSGEFTGKYKMLVDNFSQWQANAGRVQSIDLQYSRQVVVNPDVSAGTTAARTK*
Ga0126376_129707081	3300010359	Tropical Forest Soil	SDFSSKFKMLVDNFSQWQAHTGRVQSIDLQYARQVVVNPDSSAGTAAARTK*
Ga0126378_111964882	3300010361	Tropical Forest Soil	QWQAHTGRVQSIDLQYTRQVVVNPDTSAGTMAARTK*
Ga0126378_127870951	3300010361	Tropical Forest Soil	QANAGHVQSIDLQYTRQVVVNPDSSPGTMAAKTK*
Ga0126378_128385871	3300010361	Tropical Forest Soil	QWQAHTGRVQSIDLQYTRQVVVNPDTSAGAMAARTK*
Ga0126377_121324282	3300010362	Tropical Forest Soil	SQWQAHAGRVQSIDLQYTRQVVVNPDTSAGAATARK*
Ga0134066_100013141	3300010364	Grasslands Soil	FSQWQAHTGRVQSIDLQYTRQVVVNPDTSAGTVAAKVK*
Ga0126381_1039486172	3300010376	Tropical Forest Soil	WQASNGRVRSIDLQYSRQVILNPVSSATASAAKAK*
Ga0150983_110275062	3300011120	Forest Soil	GEFTGKYKMLVDNFSQWQANAGRVQSIDLQYKRQVVVNPDTSAGTARAK*
Ga0150983_132926921	3300011120	Forest Soil	FTAKFKMLVDNFSQWQANAGRMQSIDLQYSRQVVVNPDSNVGTASARKR*
Ga0137391_102940531	3300011270	Vadose Zone Soil	EFTGKYKMLVDNFSQWQANAGHVQSIDLQYSRQVVVNPDTSPGITTARKK*
Ga0137393_107213241	3300011271	Vadose Zone Soil	FTGKYKMLVDNFSQWQANAGRVQSIDLQYSRQVVVNPDASAGTAAARTK*
Ga0137388_104158892	3300012189	Vadose Zone Soil	SSEFTGKFKMLVDNFSQWQANAGHVQSIDLQYSRQVVVNPDTSSGVATARTK*
Ga0137388_120150762	3300012189	Vadose Zone Soil	VDNFAQWQANTGRVQSIYLQYSRLVVVNPYTSAGTSVASRK*
Ga0137383_110103842	3300012199	Vadose Zone Soil	GKFKMLVDNFAQWQANTGRVQSIDLQYSRQVVVNPDTSAGTSVARRK*
Ga0137365_103906541	3300012201	Vadose Zone Soil	NFAQWQANTGRVQSIDLQYSRQVVVNPDTSAGTSVARRK*
Ga0137363_109248902	3300012202	Vadose Zone Soil	YKMLIDNFSQWQANAGRVQSIDLQYSRQVVVNPDTSAGTTTARKR*
Ga0137399_104205811	3300012203	Vadose Zone Soil	IHFGAGEFTGKYKMLVDNFSQWQANTGRVQSIDLQYMRQVVVNPDTSAGAAARKTR*
Ga0137399_109561182	3300012203	Vadose Zone Soil	IHFGSSEFTGKYKMLVDNFSQWQANAGRVQSIDLQYSRQVVVNPDTSAGTTAARTK*
Ga0137399_110334312	3300012203	Vadose Zone Soil	FSQWQANTGRVQSIDLQYMRQVVVNPDASVGTAAKKTK*
Ga0137399_110375302	3300012203	Vadose Zone Soil	NFSQWQANTGRVQSIDLQYMRQVVVNPDTSAAAKKTR*
Ga0137381_114397782	3300012207	Vadose Zone Soil	SQWQANAGRVQSIDLQYSRQVVVNPDTSAGTMAAKTK*
Ga0137386_107992131	3300012351	Vadose Zone Soil	YKMLVDNFAQWQAHTGHVQSIDLQYARQVVVNPDSSAGTVAARTK*
Ga0134048_11610821	3300012400	Grasslands Soil	FGSGEFSGKYKMLIDNFSQWQANAGRVQSIDLHYSRQVVVNPDTSPGATAARTK*
Ga0137358_101091343	3300012582	Vadose Zone Soil	DNFSQWQANAGRVQSIDLQYSRQVVVNPDTSAGTTTARKR*
Ga0137358_105113862	3300012582	Vadose Zone Soil	YKMLVDNFSQWQANAGRVQSIDLQYSRQVVVNPDTSAGTTAARTK*
Ga0137397_106406371	3300012685	Vadose Zone Soil	MLVDNFSQWQANAGRVQSIDLQYSRQVVVNPDTSAGTTAARTK*
Ga0137395_109231792	3300012917	Vadose Zone Soil	GSSEFTGKYKMLIDNFSQWQANAGRVQSIDLQYSRQVVVNPDTSPGTAVARKK*
Ga0137419_112242092	3300012925	Vadose Zone Soil	YKMLVDNFSQWQANTGRVQSIDLQYMRQVVVNPDTSASTAAKKTR*
Ga0137416_108551582	3300012927	Vadose Zone Soil	KMLVDNFSQWQANAGRVQSIDLQYSRQVVVNPDASAGTSAARTK*
Ga0137416_109046551	3300012927	Vadose Zone Soil	IHFGAGEFTGKYKMLVDNFSQWQANTGRVQSIDLQYMRQVVVNPDTSTSTATKKTR*
Ga0137404_112059202	3300012929	Vadose Zone Soil	FTGKYKMLVDNFSQWQANTGRVQSIDLQYMRQVVVNPDTSTGTAAKKTR*
Ga0137407_107900141	3300012930	Vadose Zone Soil	QWQANTGRVQSIDLQYMRQVVVNPDTSTGVAGKKTR*
Ga0134087_100280403	3300012977	Grasslands Soil	MLVDNFAQWQAHTGHVQSIDLQYARQVVVNPDSSAGTVAARTK*
Ga0134079_101809542	3300014166	Grasslands Soil	WQAHTGHVQSIDLQYARQVVVNPDSSAGTVAARTK*
Ga0137418_112362261	3300015241	Vadose Zone Soil	VDNFSQWQANAGRVQSIDLQYSRQVVVNPDTSAGTTAARTK*
Ga0137409_102211211	3300015245	Vadose Zone Soil	TGKYKMLVDNFSQWQANTGRVQSIDLQYMRQVVVNPDTSASTAAKKTR*
Ga0134074_11865761	3300017657	Grasslands Soil	MLVDNFSQWQAHTGRVQSIDLQYTRQVVVNPDTSAGTVAAKIK
Ga0134083_102665062	3300017659	Grasslands Soil	DNFSQWQANAGRIQSIDLQYSRQVVVNPDTSPGTAVARKK
Ga0187819_106618062	3300017943	Freshwater Sediment	SQWQANAGHVQSIDLQYARQVVVNPDAGSGAPIAKRK
Ga0187785_105603002	3300017947	Tropical Peatland	VDNFAQWQASNGRVRSIDLQYSRQVILNTDTSAAATVARAR
Ga0066655_100003281	3300018431	Grasslands Soil	KMLIDNFSQWQANAGRVQSIDLQYSRQVVVNPDTSPGATAARTK
Ga0066662_124672601	3300018468	Grasslands Soil	VHFGSAEFTGKYKMLVDNFSQWQANAGRVQSIDLQYSRQVVVNPDNGPDTMASRRK
Ga0187798_15532881	3300019275	Peatland	YRMLVENFAQWQANAGRVQSIDLQYSRQVVVNPDTSASTGKEK
Ga0210407_106291341	3300020579	Soil	SGEFAGKYKMLVDNFSQWQANTGRVQSIDLQYLRQVIVNPEPGSGTIAKKSK
Ga0210407_111117852	3300020579	Soil	GKYKMLVDNFSQWQANAGRVQSIDLQYSRQVVVNPDASAGTAPARTK
Ga0210403_102010251	3300020580	Soil	YKMLVDNFSQWQANTGRVQSIDLQYMRQVVVNPDTSAGTASKKTK
Ga0210403_106937431	3300020580	Soil	FSQWQANTGRVQSVDLQYLRQVIVNPEPSSGTIAKKLK
Ga0210404_101911122	3300021088	Soil	GGDFAAKYRMLVENFSQWQANAGRVRSIDLQYSRQVILNPDSSVGVAVAKAR
Ga0210396_117194272	3300021180	Soil	NFAQWQASNGRVRSIDLQYSRQVILNTDTSGSTTVAKTR
Ga0210386_116021661	3300021406	Soil	QWQASNGRVRTIDLQYSRQVILNTDSSSSATVAKTR
Ga0210394_110839761	3300021420	Soil	AAKYRMLVENFSQWQANAGRVRSIDLQYSRQVILNPDSSVGVAVAKAR
Ga0210392_111902192	3300021475	Soil	LVVDNFAQWQASNGHVRNIDLQYSKQVILNTDSSGGTTVAKSR
Ga0210402_101498283	3300021478	Soil	FTNKFSMLVGNFAQWQANTGRVQSIDLQYPRQVVVNPDTSAGTITAKNK
Ga0210409_109556962	3300021559	Soil	WQANTGRVQSIDLQYMRQVVVNPDTSAGMTAKKTK
Ga0222728_10633151	3300022508	Soil	TGKYKMLVDNFSQWQANTGRVQSIDLQYLRQVIVNPEPGSGTIAKKSK
Ga0242657_10760942	3300022722	Soil	FAQWQASNGRVRTIDLQYSRQVILNTDSSGSATVAKTR
Ga0137417_11163141	3300024330	Vadose Zone Soil	VDNFSHDNFSQWQANAGRVQSIDLQYSRQVVVNPDTSAGTTAARTK
Ga0137417_12339412	3300024330	Vadose Zone Soil	YKMLIDNFSQWQANAGRVQSIDLQYSRQVVVNPDTSAGTTTARKR
Ga0137417_12995622	3300024330	Vadose Zone Soil	MLIDNFSQWQANAGRVQSIDLQYSRQVVVNPDTSAGTTTARKR
Ga0209838_10647182	3300026214	Soil	FSQWQASAGRVQSIDLQYSRQVILNPDSSAGVAVAKAR
Ga0209239_11101362	3300026310	Grasslands Soil	GKYKMLVDNFSQWQANAGRVQSIDLQYSRQVVVNPDASAGTAAAAARTK
Ga0209239_13251111	3300026310	Grasslands Soil	KYKMLVDNFSQWQANAGRVQSIDLQYSRQVVVNPDVSVGTTAARTK
Ga0209761_13428292	3300026313	Grasslands Soil	QWQANAGRVQSIDLQYARQVVVNPDSSAGTMAAKTK
Ga0209268_10075265	3300026314	Soil	FAQWQAHTGHVQSIDLQYARQVVVNPDSSAGTVAARTK
Ga0209377_10114441	3300026334	Soil	EFSGKYKMLIDNFSQWQANAGRVQSIDLQYSRQVVVNPDTSPGATAARTK
Ga0209377_10290381	3300026334	Soil	GKYKMLIDNFSQWQANAGRVQSIDLQYSRQVVVNPDTSAGTTAARTR
Ga0209377_12235652	3300026334	Soil	EFTGKYKMLVDNFSQWQANAGHVQSIDLQYSRQVVVNPDTSAGTTTARTK
Ga0257163_10101051	3300026359	Soil	KMLVDNFSQWQANAGRVQSIDLQYSRQVVVNPDASAGTAAARTK
Ga0257164_10892861	3300026497	Soil	VDNFTQWQANAGRVQSIDLQYSRQVVVNPDASAGTAAARTK
Ga0209059_10650663	3300026527	Soil	FTGKFKMLIDNFSQWQANAGRVQSIDLQYSRQVVVNPDTSPGTAVARKK
Ga0209648_106226642	3300026551	Grasslands Soil	FTGKYKMLVDNFSQWQANTGRVQSIDLQYSRQVVVNPDTSAGTTAARTK
Ga0209577_107983471	3300026552	Soil	GSSDFSGKFKMLVDNFSQWQAHTGRVQSIDLQYTRQVVVNPDTSAGAVTARTK
Ga0179587_100470791	3300026557	Vadose Zone Soil	FSQWQANAGRVQSIDLQYSRQVVVNPDTSAGTTAARAK
Ga0209220_11538461	3300027587	Forest Soil	NGDFAAKYRMLVENFLQWQANAGHIRSVDLQYSRQVILNPDSSAGVAVAKAR
Ga0209076_11554421	3300027643	Vadose Zone Soil	KYKMLVDNFSQWQANTGRVQSIDLQYMRQVVVNPDTSAGGAARKTR
Ga0209388_12139811	3300027655	Vadose Zone Soil	IDNFSQWQANAGRVQSIDLQYSRQVVVNPDTSAGTTTARKR
Ga0208991_11793542	3300027681	Forest Soil	MLAENFAQWQANAGRVQSIDLQYSRQVILNPDSRAGVAVAKAR
Ga0209626_11169892	3300027684	Forest Soil	DFAAKYRMLVENFSQWQANAGHVRSIDLQYSRQVILNPDSSAGVAVAKAR
Ga0209773_104366131	3300027829	Bog Forest Soil	ENFAQWQANAGRVRSVDLQYARQVVINPDASANSTVARAK
Ga0209167_102890582	3300027867	Surface Soil	LVNNFAQWQANTGHVQSIDLQYPRQVVVNPDTSAGTITAKNK
Ga0209283_103243732	3300027875	Vadose Zone Soil	SEFTGKYKMLVDNFSQWQANAGRVQSIDLQYSRQVVVNPDPSAGTTTARKK
Ga0209590_102492822	3300027882	Vadose Zone Soil	FGVSDFTGKFKMLVDNFAQWQANTGRVQSIDLQYSRQVVVNPDTSAGTSVARRK
Ga0209624_105817702	3300027895	Forest Soil	AQWQASNGRVRSIDLQYSRQVILNTDTSGSTTVAKTR
Ga0137415_104235791	3300028536	Vadose Zone Soil	KYKMLVDNFSQWQANTGRVQSIDLQYMRQVVVNPDASVGTAAKKTK
Ga0302222_100260661	3300028798	Palsa	AQWQANNGRVRSIDLQYARQVILNPDANVVTAARTK
Ga0308309_106122262	3300028906	Soil	LVVDNFAQWQASNGRVRTIDLQYSRQVILNTDSSSSTTVAKTR
Ga0311356_107388501	3300030617	Palsa	SSEFTGKYRMLVENFAQWQANAGRVRSVDLQYARQVVINPDASAPVTVARAK
Ga0307476_109553381	3300031715	Hardwood Forest Soil	GEFTGKYRMLVENFAQWQANAGRVRSVDLQYARQVVINPDANAATTVARAK
Ga0307468_1015671491	3300031740	Hardwood Forest Soil	AGKYKMLVDNFSQWQANTGRVQSIDLQYMRQVVVNPDTSAGTAAKKTR
Ga0307475_106977311	3300031754	Hardwood Forest Soil	FAAKYRMLVENFSQWQANAGHVRSIDLQYSRQVILNPDASAGVAVAKAR
Ga0307479_100352036	3300031962	Hardwood Forest Soil	KMLIDNFSQWQANAGRVQSIDLQYSRQVVVNPDASAGTATARKR
Ga0307479_104195652	3300031962	Hardwood Forest Soil	MLIDNFSQWQANAGRVQSIDLQYSRQVVVNPDASVGMATARKR
Ga0318562_100588161	3300032008	Soil	VDNFAQWQDHTGRVQSIDLQYARQVVVNPDSSAGTVAARTK
Ga0318556_100764353	3300032043	Soil	WQDHTGRVQSIDLQYARQVVVNPDSSAGTVAARTK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069763

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences