Metagenome / Metatranscriptome Family F069479

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069479
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	67 residues
Representative Sequence	MFETKQLQKHALECLRLQADCMELAGVARSPNVQSHFVFMARFWGALAASGPSSDAGSKLSKAEMQTA
Number of Associated Samples	87
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.71 %
% of genes near scaffold ends (potentially truncated)	12.90 %
% of genes from short scaffolds (< 2000 bps)	71.77 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (63.710 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (24.194 % of family members)
Environment Ontology (ENVO)	Unclassified (32.258 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.33% β-sheet: 0.00% Coil/Unstructured: 41.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00072	Response_reg	54.84
PF13545	HTH_Crp_2	4.84
PF00990	GGDEF	1.61
PF16242	Pyrid_ox_like	0.81
PF13007	LZ_Tnp_IS66	0.81
PF03979	Sigma70_r1_1	0.81
PF00753	Lactamase_B	0.81
PF13814	Replic_Relax	0.81
PF09361	Phasin_2	0.81
PF00528	BPD_transp_1	0.81
PF06724	DUF1206	0.81
PF00118	Cpn60_TCP1	0.81
PF01593	Amino_oxidase	0.81
PF02910	Succ_DH_flav_C	0.81
PF05598	DUF772	0.81
PF04120	Iron_permease	0.81
PF05239	PRC	0.81
PF13847	Methyltransf_31	0.81
PF05532	CsbD	0.81
PF10908	DUF2778	0.81
PF03401	TctC	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.81
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.81
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.71 %
Unclassified	root	N/A	36.29 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.71 %
Unclassified	root	N/A	36.29 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.71 %
Unclassified	root	N/A	36.29 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	50.81 %
Unclassified	root	N/A	36.29 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	40.32 %
Unclassified	root	N/A	36.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	34.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.29 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	20.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.29 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	16.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.29 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001401\|JGI20189J14885_1011905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1365	Open in IMG/M
3300001546\|JGI12659J15293_10103401	Not Available	619	Open in IMG/M
3300005542\|Ga0070732_10616351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	659	Open in IMG/M
3300005591\|Ga0070761_10716353	Not Available	627	Open in IMG/M
3300005610\|Ga0070763_10574859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	651	Open in IMG/M
3300005712\|Ga0070764_11078881	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300006638\|Ga0075522_10059221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2185	Open in IMG/M
3300006893\|Ga0073928_10082897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2742	Open in IMG/M
3300006893\|Ga0073928_10121121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2156	Open in IMG/M
3300006893\|Ga0073928_10320178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1158	Open in IMG/M
3300009628\|Ga0116125_1166965	Not Available	615	Open in IMG/M
3300009635\|Ga0116117_1201374	Not Available	526	Open in IMG/M
3300009645\|Ga0116106_1206917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	624	Open in IMG/M
3300009665\|Ga0116135_1206054	Not Available	753	Open in IMG/M
3300014169\|Ga0181531_10032622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3007	Open in IMG/M
3300014169\|Ga0181531_10125993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1540	Open in IMG/M
3300014199\|Ga0181535_10521581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	686	Open in IMG/M
3300014200\|Ga0181526_10092083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1935	Open in IMG/M
3300014201\|Ga0181537_10032858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3570	Open in IMG/M
3300014201\|Ga0181537_10414811	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300014489\|Ga0182018_10002661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17410	Open in IMG/M
3300014489\|Ga0182018_10016553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4995	Open in IMG/M
3300014489\|Ga0182018_10039816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2930	Open in IMG/M
3300014489\|Ga0182018_10257476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	959	Open in IMG/M
3300014489\|Ga0182018_10282719	Not Available	906	Open in IMG/M
3300014489\|Ga0182018_10494969	Not Available	647	Open in IMG/M
3300014492\|Ga0182013_10007611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11878	Open in IMG/M
3300014493\|Ga0182016_10041913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3681	Open in IMG/M
3300014495\|Ga0182015_10076903	All Organisms → cellular organisms → Bacteria	2355	Open in IMG/M
3300014495\|Ga0182015_10619523	All Organisms → cellular organisms → Bacteria → Proteobacteria	686	Open in IMG/M
3300014501\|Ga0182024_10015790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	14401	Open in IMG/M
3300014501\|Ga0182024_10062929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5708	Open in IMG/M
3300014501\|Ga0182024_10142179	Not Available	3390	Open in IMG/M
3300014501\|Ga0182024_10162041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3121	Open in IMG/M
3300014501\|Ga0182024_10254795	All Organisms → cellular organisms → Bacteria	2350	Open in IMG/M
3300014501\|Ga0182024_10437458	All Organisms → cellular organisms → Bacteria → Proteobacteria	1681	Open in IMG/M
3300014501\|Ga0182024_10581385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1406	Open in IMG/M
3300014501\|Ga0182024_10829130	Not Available	1123	Open in IMG/M
3300014501\|Ga0182024_11158468	Not Available	908	Open in IMG/M
3300014501\|Ga0182024_12642468	Not Available	538	Open in IMG/M
3300014501\|Ga0182024_12810027	Not Available	518	Open in IMG/M
3300014654\|Ga0181525_10010085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6441	Open in IMG/M
3300014654\|Ga0181525_10329321	Not Available	835	Open in IMG/M
3300014655\|Ga0181516_10528731	All Organisms → cellular organisms → Bacteria → Proteobacteria	606	Open in IMG/M
3300014657\|Ga0181522_10512650	Not Available	723	Open in IMG/M
3300015089\|Ga0167643_1050568	Not Available	631	Open in IMG/M
3300015206\|Ga0167644_1004834	All Organisms → cellular organisms → Bacteria → Proteobacteria	7610	Open in IMG/M
3300016700\|Ga0181513_1213960	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300017946\|Ga0187879_10338630	Not Available	834	Open in IMG/M
3300017948\|Ga0187847_10018472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4357	Open in IMG/M
3300017948\|Ga0187847_10620317	Not Available	605	Open in IMG/M
3300017988\|Ga0181520_10088150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2710	Open in IMG/M
3300018033\|Ga0187867_10463276	Not Available	699	Open in IMG/M
3300018034\|Ga0187863_10510194	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300018034\|Ga0187863_10732547	All Organisms → cellular organisms → Bacteria → Proteobacteria	559	Open in IMG/M
3300018034\|Ga0187863_10803753	Not Available	533	Open in IMG/M
3300018037\|Ga0187883_10228236	Not Available	953	Open in IMG/M
3300018038\|Ga0187855_10710791	Not Available	585	Open in IMG/M
3300018040\|Ga0187862_10229695	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300018042\|Ga0187871_10167442	Not Available	1237	Open in IMG/M
3300019888\|Ga0193751_1002326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11564	Open in IMG/M
3300022518\|Ga0224548_1033877	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300022557\|Ga0212123_10048294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3946	Open in IMG/M
3300022557\|Ga0212123_10324331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1065	Open in IMG/M
3300023259\|Ga0224551_1032874	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300025509\|Ga0208848_1083958	Not Available	654	Open in IMG/M
3300025627\|Ga0208220_1008544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	3552	Open in IMG/M
3300025627\|Ga0208220_1023311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1966	Open in IMG/M
3300027334\|Ga0209529_1095304	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300027521\|Ga0209524_1039143	Not Available	997	Open in IMG/M
3300027609\|Ga0209221_1074384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	887	Open in IMG/M
3300027648\|Ga0209420_1013543	All Organisms → cellular organisms → Bacteria → Proteobacteria	2794	Open in IMG/M
3300027652\|Ga0209007_1060405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	959	Open in IMG/M
3300027678\|Ga0209011_1003234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5725	Open in IMG/M
3300027692\|Ga0209530_1021162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1961	Open in IMG/M
3300027745\|Ga0209908_10073105	All Organisms → cellular organisms → Bacteria → Proteobacteria	804	Open in IMG/M
3300027879\|Ga0209169_10052718	All Organisms → cellular organisms → Bacteria	2114	Open in IMG/M
3300027895\|Ga0209624_10042613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2899	Open in IMG/M
3300027908\|Ga0209006_10770368	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300028746\|Ga0302233_10294595	All Organisms → cellular organisms → Bacteria → Proteobacteria	614	Open in IMG/M
3300028773\|Ga0302234_10461810	All Organisms → cellular organisms → Bacteria → Proteobacteria	543	Open in IMG/M
3300028775\|Ga0302231_10350719	Not Available	620	Open in IMG/M
3300028776\|Ga0302303_10091505	Not Available	1124	Open in IMG/M
3300028780\|Ga0302225_10304832	Not Available	755	Open in IMG/M
3300028798\|Ga0302222_10069771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1413	Open in IMG/M
3300028798\|Ga0302222_10304987	Not Available	621	Open in IMG/M
3300028906\|Ga0308309_10585503	All Organisms → cellular organisms → Bacteria → Proteobacteria	968	Open in IMG/M
3300028906\|Ga0308309_10614341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	944	Open in IMG/M
3300029882\|Ga0311368_10059810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3427	Open in IMG/M
3300029910\|Ga0311369_11463386	Not Available	514	Open in IMG/M
3300029943\|Ga0311340_10622238	All Organisms → cellular organisms → Bacteria → Proteobacteria	940	Open in IMG/M
3300029943\|Ga0311340_11133667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	634	Open in IMG/M
3300029944\|Ga0311352_10434182	All Organisms → cellular organisms → Bacteria → Proteobacteria	1071	Open in IMG/M
3300029951\|Ga0311371_10951716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1030	Open in IMG/M
3300029999\|Ga0311339_10153863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2695	Open in IMG/M
3300029999\|Ga0311339_10167554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2547	Open in IMG/M
3300030007\|Ga0311338_11149049	All Organisms → cellular organisms → Bacteria → Proteobacteria	741	Open in IMG/M
3300030058\|Ga0302179_10531818	Not Available	516	Open in IMG/M
3300030503\|Ga0311370_10450921	All Organisms → cellular organisms → Bacteria	1596	Open in IMG/M
3300030503\|Ga0311370_11318614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	771	Open in IMG/M
3300030520\|Ga0311372_11556770	Not Available	810	Open in IMG/M
3300030524\|Ga0311357_11572947	Not Available	554	Open in IMG/M
3300030524\|Ga0311357_11858993	Not Available	500	Open in IMG/M
3300030580\|Ga0311355_11431288	Not Available	600	Open in IMG/M
3300030618\|Ga0311354_10647358	Not Available	1019	Open in IMG/M
3300030763\|Ga0265763_1001240	All Organisms → cellular organisms → Bacteria	1788	Open in IMG/M
3300030862\|Ga0265753_1134989	Not Available	525	Open in IMG/M
3300030878\|Ga0265770_1081812	Not Available	632	Open in IMG/M
3300031028\|Ga0302180_10566245	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300031090\|Ga0265760_10012263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2450	Open in IMG/M
3300031234\|Ga0302325_10236333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3072	Open in IMG/M
3300031234\|Ga0302325_10476732	All Organisms → cellular organisms → Bacteria	1898	Open in IMG/M
3300031234\|Ga0302325_10738127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1407	Open in IMG/M
3300031236\|Ga0302324_102975387	Not Available	564	Open in IMG/M
3300031238\|Ga0265332_10337292	Not Available	622	Open in IMG/M
3300031524\|Ga0302320_10956848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	917	Open in IMG/M
3300031525\|Ga0302326_10203913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3296	Open in IMG/M
3300031708\|Ga0310686_105047361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	14808	Open in IMG/M
3300031708\|Ga0310686_112699715	Not Available	4748	Open in IMG/M
3300033829\|Ga0334854_119759	Not Available	634	Open in IMG/M
3300034065\|Ga0334827_252843	Not Available	513	Open in IMG/M
3300034163\|Ga0370515_0472966	Not Available	529	Open in IMG/M
3300034163\|Ga0370515_0489433	Not Available	519	Open in IMG/M
3300034163\|Ga0370515_0502202	Not Available	512	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.19%
Host-Associated	Host-Associated	0.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.39%
Aquatic	Environmental → Aquatic	25.81%
Plants	Host-Associated → Plants	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.16%
Peat	Environmental → Terrestrial → Peat	28.23%
Freshwater	Environmental → Aquatic → Freshwater	21.77%
Thermal Springs	Environmental → Aquatic → Thermal Springs	4.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	28.23%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	21.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	20.16%
Loam	Environmental → Terrestrial → Soil → Loam	12.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	12.10%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	4.03%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	28.23%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	18.55%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	17.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.06%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	4.03%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.03%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.23%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	24.19%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	9.68%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	8.87%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	8.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.06%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	6.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.65%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.84%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	4.03%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	4.03%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.23%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	3.23%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.42%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.61%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.61%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.81%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.81%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001401	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015089	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8A, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300016700	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300022518	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 20-24	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300023259	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 20-24	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028776	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M
3300034065	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20189J14885_10119054	3300001401	Arctic Peat Soil	MFEAKQLQNHALECLRLQADCIQLAGVARSPNVQSHFASMARFWGTFAASGPSSDAGSKLSKAEMQI*
JGI12659J15293_101034012	3300001546	Forest Soil	MFEAKQLRKHALECLRLQVDCMELATVAPSGNLRSHFVDTARFWGAKAVSGPSANAGPEMAQAVMQ
Ga0070732_106163512	3300005542	Surface Soil	MFEAKQLQKHALECLRLQADCMQLAGIVLSPNMQSHFVSMARFWGTLAASGPSSDAGSKLSKAEMQTA*
Ga0070761_107163532	3300005591	Soil	MSEAKQLRKHAVECLRLQADCMQLAGVARSPNMQSHFVSMARFWGTSAASVLSSGDSSKLSKAEMQIA*
Ga0070763_105748592	3300005610	Soil	MFEAKRLRKHTLECLRLQADCMELAGVAYGHNVQSHFVSMAEFWGALAVSGPSVGADSDIVDG
Ga0070764_110788812	3300005712	Soil	MELASVAHCQNMQSHFLFMAQFWGNLALSGPSSNAGAKILEAEIQTP*
Ga0075522_100592213	3300006638	Arctic Peat Soil	MFATKQLRKHALECLRLQADCMELAGIAQGHDMQAHFVHMAGFWGALAVPRPGSKVGLALFEAEQTT*
Ga0073928_100828973	3300006893	Iron-Sulfur Acid Spring	MFEAKQLQRHALECLRLQADCMQLAGVAHSLNVQSHFVSMAQFWGTLAASGPSSDAGSKLSKAETQT*
Ga0073928_101211211	3300006893	Iron-Sulfur Acid Spring	MFEAKQLQKHALECLRLQADCMQLARVARSSNVQSHFASMARFWGTFAASGPSSDAGSKLSKAEMQS*
Ga0073928_103201782	3300006893	Iron-Sulfur Acid Spring	MSEAKQLQRHALECLRLQADCMQLAGVAHSHDVQSHFVYLARFWGALAVSGPSTNAGPEIFKPEMQTT*
Ga0116125_11669652	3300009628	Peatland	MRSAVFEAKQLRKHALECLRLQADSMELAGVAHCRDMQSHFVLMAQFWGNLAVSGPSSNAGPNILNTEKQMP*
Ga0116117_12013742	3300009635	Peatland	MFDAKQLQKHALESLRLQADCMQLAGVAPSPDLQSHFVSMARFWGTLAISGPNADTGSKLFQAEMQTP*
Ga0116106_12069171	3300009645	Peatland	MFEAKQLQKHALECLRLQADCMQLAGVARSLTVQSHFVSMARFWGTLAASGPSSDA
Ga0116135_12060541	3300009665	Peatland	QLRKHALECLRLQADSMELAGVAHCRDMQSHFVLMAQFWGNLAVSGPSSNAGPNILNTEKQMP*
Ga0181531_100326227	3300014169	Bog	MFDAKQIRKHALECLRLQSDCMQLSRVADSRNLQSHFADMARFWGGLAISGPASNAKPNLFKAKTQTP*
Ga0181531_101259932	3300014169	Bog	MSEAKQLRKHALECLRLQADCMELAGVAHGHNVQSQFIDMAQFWGALAVSGPSANADTEMSQAGMQTP*
Ga0181535_105215812	3300014199	Bog	MFEAKQLRKHALECLRLQADCMELAGITHGHNVQSHFIDMARFWGAEAVSGPSANAGPEMSQAGMQTP*
Ga0181526_100920833	3300014200	Bog	VFEAKQLQKHALECLRLQADCMQLAGVARGLDVQSHFVSMARFWGILAASGPSSDASLKLSKAEMQTE*
Ga0181537_100328585	3300014201	Bog	MFDTKQLRKHALECLRLQADCMQLSKAAPNRNLQMHFVDMAQFWGALAVSGPSENAGPELLKAGMKTS*
Ga0181537_104148112	3300014201	Bog	MSETKQLRNHALECLRLQADCMELAGITHGHDVQSHFIDMAQLWGALAVSGPSENAGPEMSQAGMQTP*
Ga0182018_100026613	3300014489	Palsa	MLEAKQLRNHALECLRLQADCMELAGVAPSTDLQSHFVYMARFWGAFAVSGPSSNADPDIFKAEMQTT*
Ga0182018_100165533	3300014489	Palsa	MFEAKQLRKHALECLRLQADCMELSKVAPGRNLRSHFVDMAGFWGAMAVSGPSVNAGPEMSQAGMQTS*
Ga0182018_100398165	3300014489	Palsa	MVEAKQLQNQALECLRLQADCMQLSKVVPSRNLQSHFASMAQFWGALAASGPGANAGPAIFKAGMQTQ*
Ga0182018_102574763	3300014489	Palsa	QLQKHALECLRLQADCMQLAGVARSPNVQSHFASMARFWGTLAVSGPSSDAGPRLSKAEMQT*
Ga0182018_102827192	3300014489	Palsa	MFEAKQLQMHALECLRLQADCMQLAGVAHSPNVQSHFVSMARFWGILAASGPSSDSGSKLSKAEMQTA*
Ga0182018_104949692	3300014489	Palsa	MFEAKQLQRHALECLRLQADCMELAGVARSPNVQSHFVSMARFWGTLAASGPSSNTRSKLSKAEMQTA*
Ga0182013_100076113	3300014492	Bog	MFDAKKLRKHTLECLRLQADCMELAGVAYGHNVQSHFVSMAEFWGALAVSGPRFDANSDTVNGKLATP*
Ga0182016_100419134	3300014493	Bog	MFDAKQLQKHALECLRLEADCLELAGAASSPNVQSHFVSMARFWGALAISGPNSDSGPKPFKAEMQTT*
Ga0182015_100769033	3300014495	Palsa	MVETKHALECLRLQADCMQLAGVARGLNVQSHFVDMAQLWGALAASGPSANAGPAIFKARSQTQ*
Ga0182015_106195232	3300014495	Palsa	MFDAKQLREHALECLRLQADCMELAGVAHCRNVQSHFVSMAQFWGDLAVSEPSSKTDPETFKAETQTI*
Ga0182024_1001579012	3300014501	Permafrost	MIETKHALECLRLQADCLQLSKVVPSRDLRSHFASMAQFWGALAASGPSANAGPAIFKAGMQTQ*
Ga0182024_100629297	3300014501	Permafrost	MFEAKQLQMHALECLRLQADCMQLAGVAHSPNVQSHFVSMAQFWNTLAVSGPSSDAGSKLFQS*
Ga0182024_101421792	3300014501	Permafrost	MFEAKQLQKHALECLRLQADCMQLAGVARSLTVQSHFVSMARFWGTLAASGPSSDAGSNPPKAET*
Ga0182024_101620413	3300014501	Permafrost	MFEAKQLQRHALECLRLQADCMQLAGVACSLNVQSHFVSMAQFWGALAASGPSSDAGSKLSKPEMQS*
Ga0182024_102547953	3300014501	Permafrost	MFEAKQLRKHALECLRLQADCFELASVARNCNVQSHFVYMAEFWGNLAVSGPSSNAGPETFRAEMQTT*
Ga0182024_104374583	3300014501	Permafrost	MFDTKQLRKHALECLRLQADCMELAGVAHGSNVQSHFVFMAKFWGNLAIPGPSSNAGPKILEAEIPTP*
Ga0182024_105813851	3300014501	Permafrost	MFDAKQLRKHALECLRLQADCMELAGVAHCRNVQSHFVSMAEFWGNLAVSGPSSDAGSKLTKAEMQT*
Ga0182024_108291302	3300014501	Permafrost	MFATKQLRKHALECLRLQTDCVELARVAHGHDVQAHFVHMAAFWDALAISGPGSSVGLKLSEAEQTT*
Ga0182024_111584682	3300014501	Permafrost	MFEAKQLQKHAQECLRLQADCMQLAGVAHSPNVQSHFVSMARFWGILAASGPSSDAGSKLSKAEMQTA*
Ga0182024_126424681	3300014501	Permafrost	MFEAKQLRKHALECLRLQADCMELAGVAHCQNVQSHFVFMAQFWGNLADSGPSSNAGPKIIEAEIQTT*
Ga0182024_128100272	3300014501	Permafrost	MFELKQQRKHLECLRLQADCMKLAKAAHSRDLQSHFDSMARFWSNLAVSGPGSNVGPELFEAEMQTP*
Ga0181525_100100856	3300014654	Bog	MSEAKQLRKHALECLRLQADCMELAGITHGHDVQSHFIDMAQFWGALAVSGPSANASPEMSQAGMQTP*
Ga0181525_103293212	3300014654	Bog	MRSAVFEAKKLRKHALECLRLQADCMELAGVAHCRDMQSHFVFMAGFWGNLAVPGPSSNAGPKSLKADKQTP*
Ga0181516_105287312	3300014655	Bog	MFEAKQLRKHALECLRLQADCMELAGVAHCRNMQSHFVFMAEFWGNLAVSGPSSNAGPKILETEKLTP*
Ga0181522_105126501	3300014657	Bog	MFDAKQLEKHALECLRLQADCMQLSKAAPNRNLQTHFVDMAQFWGALAVSGPSENAGP*
Ga0167643_10505681	3300015089	Glacier Forefield Soil	MFEAKQLQKHALECLRLQADCMELAGVAHGFHVQSHFVAMAQFWGTLAALGPSSDTSSK
Ga0167644_10048349	3300015206	Glacier Forefield Soil	MFEAKYKRKHALECLRLQADCMELAGVVHGYDVQSHFVSMARFWGDLAVSGPGSDADPQIVNGEIETP*
Ga0181513_12139602	3300016700	Peatland	EAKQLRKHALECLRLQADCMELAGITHGHDVQSHFIDMAQFWGALAVSGPSANASPEMSQAGMQTP
Ga0187879_103386302	3300017946	Peatland	MFEAKQLQKHALECLRLQADCMQLAGVARSLTVQSHFVSMARFWGTLAASGPSSDAGSNPPKAET
Ga0187847_100184724	3300017948	Peatland	MRSAVFEAKQLRKHALECLRLQADSMELAGVAHCRDMQSHFVLMAQFWGNLAVSGPSSNAGPNILNTEKQMP
Ga0187847_106203172	3300017948	Peatland	MFKAKQLQMHALECLRLQADCMELAGVARSSNVQSHFVSMARFWGTLAASGPSSNAGSKLSKAEVQTA
Ga0181520_100881502	3300017988	Bog	MSEAKQLRKHALECLRLQADCMELAGITHGHDVQSHFIDMAQFWGALAVSGPSANASPEMSQAGMQTP
Ga0187867_104632762	3300018033	Peatland	VFEAKQLQKHALECLRLQADCMQLAGVARGLDVQWHFVSMARFWGILAASGPSSDASLKLSKAEMQTE
Ga0187863_105101942	3300018034	Peatland	MSDPKQLRKHALECLRLQADCMELATVAPSGNLQSHFVNMARFWGAKAVSGSSANAGPEMSNAGMQTP
Ga0187863_107325472	3300018034	Peatland	MFDAKQLQKHALESLRLQADCMQLAGVAPSPDLQSHFVSMARFWGTLAISGPNADTGSKLFQAEMQTP
Ga0187863_108037532	3300018034	Peatland	MPETKQLRKHALECLRLQADCMELAKVAYGGNLQSHFVAMAQFWGDLAVSGPSSNAGPETFKAEMQST
Ga0187883_102282363	3300018037	Peatland	MFEAKQLQKHALECLRLQADCMQLAGVARSLTVQSHFVSMARFWGTLAASGPSSNTRSKLSKAELQTADNEIIPRCFDRRT
Ga0187855_107107912	3300018038	Peatland	KQLQKHALECLRLQADCMQLAGVARGLDVQSHFVSMARFWGILAASGPSSDASLKLSKAEMQTE
Ga0187862_102296952	3300018040	Peatland	MFEAKQLQKHALECLRLQADCMELAGVARSLTVQSHFVSMARFWGTLAASGPSSDAGSNPPKAET
Ga0187871_101674423	3300018042	Peatland	MFGAKQLQRHALECLRLQADCMELATVAPSGNLQSHFVNMARFWGAKAVSGSSANAGPEMSNAGMQTP
Ga0193751_10023262	3300019888	Soil	MFEAKQLQRRALECLRLQADCMQLAGVAHNLNVQPHFVSMAQFWGTLAALGPSSDAGSKLSKAEMQT
Ga0224548_10338772	3300022518	Soil	MFEAKQLQKHALECLRLQADCMELAGVAHGFHVQSHFVAMARFWGALAVSGPSSDAGSKLTKAEMQT
Ga0212123_100482944	3300022557	Iron-Sulfur Acid Spring	MFEAKQLQRHALECLRLQADCMQLAGVAHSLNVQSHFVSMAQFWGTLAASGPSSDAGSKLSKAETQT
Ga0212123_103243313	3300022557	Iron-Sulfur Acid Spring	MFEAKQLQKHALECLRLQADCMQLARVARSSNVQSHFASMARFWGTFAASGPSSDAGSKLSKAEMQS
Ga0224551_10328742	3300023259	Soil	MVEAKQLQNQALECLRLQADCMQLSKVVPSRNLQSHFASMAQFWGALAASGPGANAGPAIFKAGMQTQ
Ga0208848_10839581	3300025509	Arctic Peat Soil	MFATKQLQKHALECLRLQADSMQLAGVARSLNAQSHFVAMARFWGTLAASGPSSDAGSKPSKAEMQTA
Ga0208220_10085443	3300025627	Arctic Peat Soil	MFEAKQLQNHALECLRLQADCIQLAGVARSPNVQSHFASMARFWGTFAASGPSSDAGSKLSKAEMQI
Ga0208220_10233113	3300025627	Arctic Peat Soil	MFATKQLRKHALECLRLQADCMELAGIAQGHDMQAHFVHMAGFWGALAVPRPGSKVGLALFEAEQTT
Ga0209529_10953042	3300027334	Forest Soil	LQKHALECLRLQADCMELAGVARSPNVQSHFVSMAEFWGNLAVSGPSSKAGPETFKAETQTT
Ga0209524_10391431	3300027521	Forest Soil	MFEATQLQKHALECLRLQADCMQLAGIAGSLNVQSHFVSMARFWGTLAASGPSSDAGSKLSKAEMQT
Ga0209221_10743842	3300027609	Forest Soil	MFEAKQLQRHALECLRLQADCMELAGVARSSDVQSHFASMARYWGILAASGPSSDAGSKPSKAEMQTTC
Ga0209420_10135431	3300027648	Forest Soil	MFETKQLQKHAQECLRLQADCMELAGVARSPNVQSHFASMARFWGTFAASGPSSDAGSKLSKAEMQT
Ga0209007_10604053	3300027652	Forest Soil	MFEAEQLRKHALECLRLQADCMELAGVAHCRNMQSHFVFMAEFWGNLAVSGPSSDAGPKILKTEKQTP
Ga0209011_10032344	3300027678	Forest Soil	MFEATQLQKHALECLRLQADCMQLAGIAGSPNVQSHFVSMARFWGTLAASGPSSDAGSKLPKAEMQS
Ga0209530_10211623	3300027692	Forest Soil	MFETKQLQKHALECLRLQADCMELAGVARSPNRQSHFVCMARFWGTLAASGPSSDAGSKLSKAEMQTA
Ga0209908_100731052	3300027745	Thawing Permafrost	MLEAKQLRNHALECLRLQADCMELAGVAPSTDLQSHFVYMARFWGAFAVSGPSSNADPDIFKAEMQTT
Ga0209169_100527184	3300027879	Soil	MFEAKQLQKHALECLRLQADCMHLAGVAHCYNVQSHFVSMAQFWGALAASGPSSDAASKLPNEMQTP
Ga0209624_100426133	3300027895	Forest Soil	MFEAKQLRKHALECLRLQVDCMELATVAPSGNLRSHFVDTARFWGAKAVSGPSANAGPEMAQAVMQTP
Ga0209006_107703681	3300027908	Forest Soil	MRSAVFEAKQLRKHALECLRLQADCMELAGVAHCRNMQSHFVFMAEFWGNLAVSEPNSNAGPNILKTEKQTP
Ga0302233_102945951	3300028746	Palsa	HALECLRLQADCMELAGVSPSGNVQSHFVSMAQFWGNLAVSGPGWNAGPETFKAEIQTT
Ga0302234_104618101	3300028773	Palsa	LECLRLQADCMELAGVAHCRDMQSHFIFMAEFWGNLVVSGPSSNAGPKILKTEKQTP
Ga0302231_103507191	3300028775	Palsa	MFETKQLQKHVLECLRLQADCMELAGVARSPNRQSHFVCMARFWGTLAASGPSSDAGSKLSKAEMQTA
Ga0302303_100915052	3300028776	Palsa	MFGAKQLQRHALECLRLQADCMELAGVARSPNRQSHFVCMARFWGTLAASGPSSDAGSKLSKAEMQTA
Ga0302225_103048323	3300028780	Palsa	MRSAVFEAKQLRKNALECLRLQADSMELAGVAHCRDMQSHFVLMAQFWGNLAVSGPSSNAGPNILNTEKQMP
Ga0302222_100697711	3300028798	Palsa	MFDTKQLRKHALECLRLQADCMELAGVAHGSNVQSHFVFMAKFWGNLAVSGPSLSAGPKILEAEMQTT
Ga0302222_103049872	3300028798	Palsa	MFEAKQLRKHALECLRLQADCMELAGVSPSGNVQSHFVSMAQFWGNLAVSGPSSNAGPNILNTEKQMP
Ga0308309_105855032	3300028906	Soil	MSEAKQLRKHAVECLRLQADCMQLAGVARSPNMQSHFVSMARFWGTSAASVLSSGDSSKLSKAEMQIA
Ga0308309_106143412	3300028906	Soil	MFEAKQLQRHALECLRLQADCMQLAGVACSLNVQSHFVAMAQFWGALAASGPSSDAGSKLSKLETQT
Ga0311368_100598102	3300029882	Palsa	MFEAKQLRKHALECLRLQADCMELAGVSPSGNVQSHFVSMAQFWGNLAVSGPGWNAGPETFKAEIQTT
Ga0311369_114633861	3300029910	Palsa	RSAMFDAKQLRKHALECLRLQADCMELAGVAHGSNVQSHFVFMAKFWGNLAVSGPSLNAGPKILEAEIPTP
Ga0311340_106222382	3300029943	Palsa	MFEAEQLRKHALECLRLQADCMELAGVAHGSNVQSHFVFMAKFWGNLAVSGPSSNAGPKILEAEIPTP
Ga0311340_111336672	3300029943	Palsa	MFETKQLQKHALECLRLQADCMELAGVARSPNVQSHFVFMARFWGALAASGPSSPARNFPKAEMQTA
Ga0311352_104341821	3300029944	Palsa	MFDAKQLQKHALECLRLQADCMELAGVAHGSNVQSHFVFMAKFWGNLAVSGPSLSAGPKILEAEMQTT
Ga0311371_109517163	3300029951	Palsa	MIEAEQLRKHALECLRLQADCMELAGVAHCRDMQSHFIFMAEFWGNLVVSGPSSNAGPKILKTEKQTP
Ga0311339_101538633	3300029999	Palsa	MFGAKLLQRHALECLRLQADCMELAGVARSSNVQSHFVSMARFWGTLAASGPSSNTRPKLSKAEMQTA
Ga0311339_101675544	3300029999	Palsa	MFDAKQLRKHALECLRLQADCMELAGVAHGSNVQSHFVFMAKFWGNLAVSGPSLNAGPKILEAEIPTP
Ga0311338_111490492	3300030007	Palsa	MPETKQLRKHALECLRLQADCMELARVAGSHKMRSHFAGMARFWGALAVSGPGSNAGPELFTAEMQTQ
Ga0302179_105318182	3300030058	Palsa	MFEAKQLRKHALECLRLQADCMELAGVAHGSNVQSHFVFMAKFWGNLAVSGPSLSAGPKILEAEMQTT
Ga0311370_104509213	3300030503	Palsa	MLEAKYKRKHTLECLRLQVDCMELAGVVHGYDLQSHFVAMARFWGALAVSGPGSNAAPKIVNGEIEAS
Ga0311370_113186141	3300030503	Palsa	MFETKQLQKHALECLRLQADCMELAGVARSPNVQSHFVFMARFWGTLAASGPSSDAGSKLSKAEMQTA
Ga0311372_115567702	3300030520	Palsa	MFEAKQLRKHALECLRLQADCMELAGVAHCRDMQSHFIFMAEFWGNLVVSGPSSNAGPKILKTEKQTP
Ga0311357_115729472	3300030524	Palsa	MRDAKHKRKHTLECLWLQADCMELAGVVQGHGVQSHFVSMARFWGDLAVSGPGSIADPQIVKDEVETP
Ga0311357_118589931	3300030524	Palsa	MFETKQLQKHALECLRLQADCMELAGVARSPNVQSHFVFMARFWGALAASGPSSDAGSKLSKAEMQTA
Ga0311355_114312882	3300030580	Palsa	MFDAKQLQKHALECLRLQADCMRLAGVAHGQNMQSHFVSMARFWGALAISGPNSDTGPTLSETEMQTT
Ga0311354_106473582	3300030618	Palsa	MRDAKHKRKHTLECLRLQADCMELAGVVQGHGVQSHFVSMARFWGDLAVSGPGSIADPQIVKDEVETP
Ga0265763_10012402	3300030763	Soil	MFEAKQLQRHALECLRLQADCMQLAGVARSLNVQSHFVAMAQFWGTLAALGPSSDAGSKLSKAEMQT
Ga0265753_11349892	3300030862	Soil	MFEAKQLQRHALECLRLQADCMQLAGVARSLTVQSHFVSMARFWGTLAASGPSSDAGSKLSRAEMQTA
Ga0265770_10818121	3300030878	Soil	MFEAKQLQRHALECLRLQADCMQLSKVAPSRNLQSHFVNMAQFWGASAVSGPSANAGPEMSKA
Ga0302180_105662452	3300031028	Palsa	MFEAKQLRKHALECLRLQADCMELAGVAPSRDMQSHFVFMAGFWGNLAVSGPSSNAGPKSLKTDKQ
Ga0265760_100122633	3300031090	Soil	MFETKQLPNHALACLRLQADCMQLAGVARSPNVQSHFVSMARFWDTLAASGPSSDARPKLSKAGMQT
Ga0302325_102363335	3300031234	Palsa	MFEAEQLRKHALECLRLQADCMELAGVAHGSNVQSHFVFMAKFWGNLAVSGPSLSAGPKILEAEMQTT
Ga0302325_104767324	3300031234	Palsa	MFEAKQLQMHALECLRLQADCMQLAGVAHSPNVQSHFVSMARFWGILAASGPSSDAGSKLSKAEMQTA
Ga0302325_107381272	3300031234	Palsa	MFELKQQRKYVLECLRLQADCMELAKAAHSRDLQSHFDSMARFWSNLAVSGPGSNVGQEIFEAEMQTP
Ga0302324_1029753872	3300031236	Palsa	MFDEAKQLQMHALECLRLQADCMQLAGVANSLNMQSHFVSMARFWGILAASGPSSAAGSIPSKAEMQTA
Ga0265332_103372922	3300031238	Rhizosphere	MFEAKQLQKHALECLRLQADCMELAGVAHGFHVQSHFVAMARFWGALAVSGPSSDAGSKLSKAQMQT
Ga0302320_109568481	3300031524	Bog	DAKQLQKHALECLRLQAECMELASIAHCQNMQSHFVFMAKFWGNLAVSGPSLNAGPKILEAEIPTP
Ga0302326_102039137	3300031525	Palsa	MFGAKQLQRHALECLRLQADCMELAGVARSSNVQSHFVSMARFWGTLAASGPSSNTRPKLSKAEMQTA
Ga0310686_1050473613	3300031708	Soil	MFETKQLQKHALECLRLRADCMELAGAARSPNVQSHFVFMARFWGTLAASGPSSDAGSKLSKAEMQTA
Ga0310686_1126997154	3300031708	Soil	MFEAKQLQKHALECLRLQADCMQLAGVARSLTVQSHFVSMARFWGTLAASGPSSDAGSNPSKAET
Ga0334854_119759_250_456	3300033829	Soil	MFEAKQLQMHALECLRLQADCMQLAGVAHSPNVQSHFVSMARFWGILAASGPSSDAGSKLSKVEMQTA
Ga0334827_252843_188_394	3300034065	Soil	MFDAKQLQKHALECLRLEADCLELAGAASNPNVQSHFVSMARFWGALAISGPNSDSGPKTFKAEMQTT
Ga0370515_0472966_192_398	3300034163	Untreated Peat Soil	MFDAKQLRKHALECLRLQADCMELAGVAHGSNVQSHFVFMAKFWGNLAVSGPSLNAGPKTLEAEIPTP
Ga0370515_0489433_155_361	3300034163	Untreated Peat Soil	MSDAKQLRKHALECLRLQADCMQLSKVAPSRNLQSHFVNMAQFWGASAVSGSGANAGPEMSNAGMPTP
Ga0370515_0502202_21_227	3300034163	Untreated Peat Soil	MFETKQLRKHVLECLRLQADCMELAKAAYSRDLQSHFDSMARFWGDLAVAGQGANAGSEIFEAEMQTA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069479

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences