Metagenome / Metatranscriptome Family F069443

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069443
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	42 residues
Representative Sequence	RFHNICLGFGYREAEIIPAKMEIEEWCREHLEHLESKFR
Number of Associated Samples	107
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.81 %
% of genes near scaffold ends (potentially truncated)	98.39 %
% of genes from short scaffolds (< 2000 bps)	96.77 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (46.774 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (25.806 % of family members)
Environment Ontology (ENVO)	Unclassified (57.258 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (83.871 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.25% β-sheet: 0.00% Coil/Unstructured: 50.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00924	MS_channel	1.61
PF03721	UDPG_MGDP_dh_N	0.81
PF01555	N6_N4_Mtase	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	1.61
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	1.61
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.81
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.81
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.81
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.81
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.81
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.81
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.81
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.23 %
Unclassified	root	N/A	46.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.77 %
cellular organisms	root	All Organisms → cellular organisms	45.97 %
Viruses	superkingdom	All Organisms → Viruses	7.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.77 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.45 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.61 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	35.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.45 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	1.61 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	35.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.45 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	1.61 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.77 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	35.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.45 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.61 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.77 %
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	35.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.45 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.61 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.77 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	35.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.45 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.61 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000973\|BBAY93_10132471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	629	Open in IMG/M
3300001344\|JGI20152J14361_10113251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	523	Open in IMG/M
3300001346\|JGI20151J14362_10168339	Not Available	633	Open in IMG/M
3300001349\|JGI20160J14292_10153278	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300001450\|JGI24006J15134_10060485	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1500	Open in IMG/M
3300001460\|JGI24003J15210_10183886	Not Available	504	Open in IMG/M
3300001943\|GOS2226_1027208	All Organisms → Viruses → Predicted Viral	1439	Open in IMG/M
3300005606\|Ga0066835_10222090	Not Available	642	Open in IMG/M
3300005913\|Ga0075108_10106433	Not Available	1025	Open in IMG/M
3300005914\|Ga0075117_1142750	Not Available	690	Open in IMG/M
3300005914\|Ga0075117_1181216	Not Available	593	Open in IMG/M
3300006027\|Ga0075462_10052463	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300006637\|Ga0075461_10192059	Not Available	614	Open in IMG/M
3300006810\|Ga0070754_10480008	Not Available	537	Open in IMG/M
3300006867\|Ga0075476_10259753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	617	Open in IMG/M
3300006870\|Ga0075479_10204440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	792	Open in IMG/M
3300006919\|Ga0070746_10394180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	621	Open in IMG/M
3300007234\|Ga0075460_10324321	Not Available	502	Open in IMG/M
3300007960\|Ga0099850_1289506	Not Available	624	Open in IMG/M
3300009124\|Ga0118687_10406414	Not Available	527	Open in IMG/M
3300009172\|Ga0114995_10068456	Not Available	2005	Open in IMG/M
3300009193\|Ga0115551_1271585	Not Available	746	Open in IMG/M
3300009423\|Ga0115548_1244042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	552	Open in IMG/M
3300009433\|Ga0115545_1038977	All Organisms → Viruses → Predicted Viral	1874	Open in IMG/M
3300009434\|Ga0115562_1119064	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300009438\|Ga0115559_1335306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	528	Open in IMG/M
3300009438\|Ga0115559_1338193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	525	Open in IMG/M
3300009449\|Ga0115558_1293356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	648	Open in IMG/M
3300009472\|Ga0115554_1084780	All Organisms → Viruses → Predicted Viral	1368	Open in IMG/M
3300009472\|Ga0115554_1133483	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300009495\|Ga0115571_1122177	Not Available	1111	Open in IMG/M
3300009512\|Ga0115003_10700073	Not Available	590	Open in IMG/M
3300009677\|Ga0115104_10964058	Not Available	1031	Open in IMG/M
3300009790\|Ga0115012_11239157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	629	Open in IMG/M
3300010153\|Ga0098059_1307260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	605	Open in IMG/M
3300010299\|Ga0129342_1353138	Not Available	500	Open in IMG/M
3300010318\|Ga0136656_1135381	Not Available	849	Open in IMG/M
3300010368\|Ga0129324_10065251	All Organisms → Viruses → Predicted Viral	1630	Open in IMG/M
3300010368\|Ga0129324_10153395	Not Available	958	Open in IMG/M
3300012954\|Ga0163111_10766892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	915	Open in IMG/M
3300017708\|Ga0181369_1062260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	817	Open in IMG/M
3300017708\|Ga0181369_1077494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	711	Open in IMG/M
3300017717\|Ga0181404_1140644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	584	Open in IMG/M
3300017719\|Ga0181390_1126738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	661	Open in IMG/M
3300017725\|Ga0181398_1037818	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1179	Open in IMG/M
3300017746\|Ga0181389_1021529	All Organisms → cellular organisms → Bacteria	2017	Open in IMG/M
3300017746\|Ga0181389_1208544	Not Available	503	Open in IMG/M
3300017748\|Ga0181393_1131256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	631	Open in IMG/M
3300017757\|Ga0181420_1035016	All Organisms → Viruses → Predicted Viral	1639	Open in IMG/M
3300017764\|Ga0181385_1086226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	964	Open in IMG/M
3300017765\|Ga0181413_1044700	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300017771\|Ga0181425_1130815	Not Available	800	Open in IMG/M
3300017786\|Ga0181424_10330017	Not Available	630	Open in IMG/M
3300017818\|Ga0181565_10725831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	629	Open in IMG/M
3300017824\|Ga0181552_10296032	Not Available	799	Open in IMG/M
3300017949\|Ga0181584_10224468	Not Available	1227	Open in IMG/M
3300017950\|Ga0181607_10522438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	632	Open in IMG/M
3300017951\|Ga0181577_10569737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	701	Open in IMG/M
3300017952\|Ga0181583_10848796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	535	Open in IMG/M
3300017967\|Ga0181590_10384064	Not Available	1001	Open in IMG/M
3300017986\|Ga0181569_10861767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	591	Open in IMG/M
3300018036\|Ga0181600_10505822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	573	Open in IMG/M
3300018048\|Ga0181606_10068012	All Organisms → Viruses → Predicted Viral	2345	Open in IMG/M
3300018049\|Ga0181572_10321341	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300018049\|Ga0181572_10368232	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300018410\|Ga0181561_10325557	Not Available	711	Open in IMG/M
3300018410\|Ga0181561_10345366	Not Available	684	Open in IMG/M
3300018413\|Ga0181560_10295220	Not Available	760	Open in IMG/M
3300018415\|Ga0181559_10254716	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300018417\|Ga0181558_10353573	Not Available	789	Open in IMG/M
3300018418\|Ga0181567_10664983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	668	Open in IMG/M
3300018424\|Ga0181591_10789748	Not Available	660	Open in IMG/M
3300018876\|Ga0181564_10503812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	649	Open in IMG/M
3300019751\|Ga0194029_1044381	Not Available	724	Open in IMG/M
3300020053\|Ga0181595_10224559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	810	Open in IMG/M
3300020188\|Ga0181605_10430153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	516	Open in IMG/M
3300020194\|Ga0181597_10409458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	567	Open in IMG/M
3300020379\|Ga0211652_10164041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	677	Open in IMG/M
3300020400\|Ga0211636_10251175	Not Available	680	Open in IMG/M
3300020428\|Ga0211521_10343053	Not Available	659	Open in IMG/M
3300020438\|Ga0211576_10625303	Not Available	534	Open in IMG/M
3300020601\|Ga0181557_1200966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	744	Open in IMG/M
3300021958\|Ga0222718_10168222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1223	Open in IMG/M
3300021959\|Ga0222716_10375517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	834	Open in IMG/M
3300021959\|Ga0222716_10382458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	823	Open in IMG/M
3300021960\|Ga0222715_10348684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	825	Open in IMG/M
3300021964\|Ga0222719_10550850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	681	Open in IMG/M
3300022200\|Ga0196901_1176307	Not Available	698	Open in IMG/M
3300022921\|Ga0255765_1216432	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300022923\|Ga0255783_10323272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	615	Open in IMG/M
3300022929\|Ga0255752_10280849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	718	Open in IMG/M
3300022937\|Ga0255770_10115641	All Organisms → Viruses → Predicted Viral	1493	Open in IMG/M
3300022937\|Ga0255770_10151312	Not Available	1229	Open in IMG/M
3300023173\|Ga0255776_10179214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1326	Open in IMG/M
3300023173\|Ga0255776_10300048	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300023240\|Ga0222676_1029960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	880	Open in IMG/M
3300025120\|Ga0209535_1105583	Not Available	996	Open in IMG/M
3300025120\|Ga0209535_1127735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	849	Open in IMG/M
3300025128\|Ga0208919_1155776	Not Available	705	Open in IMG/M
3300025483\|Ga0209557_1121149	Not Available	509	Open in IMG/M
3300025502\|Ga0208903_1091420	Not Available	690	Open in IMG/M
3300025590\|Ga0209195_1116188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	576	Open in IMG/M
3300025601\|Ga0208768_1072466	Not Available	1000	Open in IMG/M
3300025610\|Ga0208149_1057551	Not Available	992	Open in IMG/M
3300025610\|Ga0208149_1139480	Not Available	559	Open in IMG/M
3300025694\|Ga0209406_1161419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	701	Open in IMG/M
3300025803\|Ga0208425_1126068	Not Available	582	Open in IMG/M
3300025818\|Ga0208542_1208185	Not Available	502	Open in IMG/M
3300025890\|Ga0209631_10523988	Not Available	521	Open in IMG/M
3300025892\|Ga0209630_10185626	All Organisms → Viruses → Predicted Viral	1024	Open in IMG/M
3300025897\|Ga0209425_10105448	Not Available	1664	Open in IMG/M
3300026187\|Ga0209929_1113545	Not Available	691	Open in IMG/M
3300026187\|Ga0209929_1168704	Not Available	524	Open in IMG/M
3300028115\|Ga0233450_10276094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	729	Open in IMG/M
3300028196\|Ga0257114_1261581	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	612	Open in IMG/M
3300031519\|Ga0307488_10809560	Not Available	517	Open in IMG/M
3300031588\|Ga0302137_1276854	Not Available	555	Open in IMG/M
3300031594\|Ga0302131_1287294	Not Available	518	Open in IMG/M
3300031596\|Ga0302134_10378652	Not Available	522	Open in IMG/M
3300031626\|Ga0302121_10097056	Not Available	868	Open in IMG/M
3300031626\|Ga0302121_10111695	Not Available	797	Open in IMG/M
3300031626\|Ga0302121_10120061	Not Available	763	Open in IMG/M
3300031627\|Ga0302118_10549671	Not Available	502	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.19%
Host-Associated	Host-Associated	0.81%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.19%
Algae	Host-Associated → Algae	0.81%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	91.13%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	6.45%
Freshwater	Environmental → Aquatic → Freshwater	0.81%
Sediment	Environmental → Aquatic → Sediment	0.81%
Green Algae	Host-Associated → Algae → Green Algae	0.81%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	27.42%
Oceanic	Environmental → Aquatic → Marine → Oceanic	15.32%
Coastal	Environmental → Aquatic → Marine → Coastal	15.32%
Pelagic	Environmental → Aquatic → Marine → Pelagic	9.68%
Unclassified	Environmental → Aquatic → Marine → Unclassified	8.87%
Strait	Environmental → Aquatic → Marine → Strait	8.87%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	6.45%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	4.84%
River	Environmental → Aquatic → Freshwater → River	0.81%
Inlet	Environmental → Aquatic → Marine → Inlet	0.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	0.81%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	25.81%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	15.32%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	14.52%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	9.68%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	8.87%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	8.87%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	6.45%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	4.84%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.61%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.81%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.81%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	25.81%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	14.52%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	10.48%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	9.68%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	8.87%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	4.84%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	4.84%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	4.03%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	4.03%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	3.23%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	1.61%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.61%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	1.61%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.81%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.81%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	0.81%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.81%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.81%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000973	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY93	Host-Associated	Open in IMG/M
3300001344	Pelagic Microbial community sample from North Sea - COGITO 998_met_02	Environmental	Open in IMG/M
3300001346	Pelagic Microbial community sample from North Sea - COGITO 998_met_01	Environmental	Open in IMG/M
3300001349	Pelagic Microbial community sample from North Sea - COGITO 998_met_10	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001943	Marine microbial communities from Cape May, New Jersey, USA - GS010	Environmental	Open in IMG/M
3300005606	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV84	Environmental	Open in IMG/M
3300005913	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK1	Environmental	Open in IMG/M
3300005914	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKJ	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006867	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA	Environmental	Open in IMG/M
3300006870	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300007234	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA	Environmental	Open in IMG/M
3300007960	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG	Environmental	Open in IMG/M
3300009124	Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsf	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009193	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321	Environmental	Open in IMG/M
3300009423	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009434	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516	Environmental	Open in IMG/M
3300009438	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506	Environmental	Open in IMG/M
3300009449	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426	Environmental	Open in IMG/M
3300009472	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009677	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_70_C50_10m_0.8um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300010299	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNA	Environmental	Open in IMG/M
3300010318	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNA	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300017708	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG	Environmental	Open in IMG/M
3300017717	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25	Environmental	Open in IMG/M
3300017719	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21	Environmental	Open in IMG/M
3300017725	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29	Environmental	Open in IMG/M
3300017746	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29	Environmental	Open in IMG/M
3300017748	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental	Open in IMG/M
3300017771	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13	Environmental	Open in IMG/M
3300017786	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018048	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018410	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018413	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018415	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018417	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018876	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019751	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW18Oct16_MG	Environmental	Open in IMG/M
3300020053	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041401AS metaG (spades assembly)	Environmental	Open in IMG/M
3300020188	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041411US metaG (spades assembly)	Environmental	Open in IMG/M
3300020194	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly)	Environmental	Open in IMG/M
3300020379	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556001-ERR599168)	Environmental	Open in IMG/M
3300020400	Marine microbial communities from Tara Oceans - TARA_B100001115 (ERX555947-ERR598992)	Environmental	Open in IMG/M
3300020428	Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300020601	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011506CT metaG (spades assembly)	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300022921	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG	Environmental	Open in IMG/M
3300022923	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG	Environmental	Open in IMG/M
3300022929	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG	Environmental	Open in IMG/M
3300022937	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG	Environmental	Open in IMG/M
3300023173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG	Environmental	Open in IMG/M
3300023240	Saline water microbial communities from Ace Lake, Antarctica - #870	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025483	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI074_LV_120m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025502	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKJ (SPAdes)	Environmental	Open in IMG/M
3300025590	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420 (SPAdes)	Environmental	Open in IMG/M
3300025601	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK1 (SPAdes)	Environmental	Open in IMG/M
3300025610	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025694	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426 (SPAdes)	Environmental	Open in IMG/M
3300025803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025818	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025890	Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)	Environmental	Open in IMG/M
3300025892	Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)	Environmental	Open in IMG/M
3300025897	Pelagic Microbial community sample from North Sea - COGITO 998_met_05 (SPAdes)	Environmental	Open in IMG/M
3300026187	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300028115	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501CT (spades assembly)	Environmental	Open in IMG/M
3300028196	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_10m	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031588	Marine microbial communities from Western Arctic Ocean, Canada - CBN3_SCM	Environmental	Open in IMG/M
3300031594	Marine microbial communities from Western Arctic Ocean, Canada - CB9_20m	Environmental	Open in IMG/M
3300031596	Marine microbial communities from Western Arctic Ocean, Canada - CB9_SCM	Environmental	Open in IMG/M
3300031626	Marine microbial communities from Western Arctic Ocean, Canada - CB21_surface	Environmental	Open in IMG/M
3300031627	Marine microbial communities from Western Arctic Ocean, Canada - AG5_33.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
BBAY93_101324711	3300000973	Macroalgal Surface	FQSVCMGFGYREAEIIPVKMEIEEWCREHLEHLESKFR*
JGI20152J14361_101132511	3300001344	Pelagic Marine	PDKFADRFQHICFGFGYXEAEIIPAKNEIREWCQEHLSHLESKFR*
JGI20151J14362_101683393	3300001346	Pelagic Marine	RFHNICLGFGYREAEIIPAKMEIEEWCREHLEHLESKFR*
JGI20160J14292_101532783	3300001349	Pelagic Marine	HSICLGFGYRESEIIPAKMEIEEWCQEHLTHLESKFR*
JGI24006J15134_100604851	3300001450	Marine	DRFQHICFGFGYREAEIIPMKSEIKEWCQEHLDHLESKFR*
JGI24003J15210_101838862	3300001460	Marine	MSPEKFADRFQHICFGFGYRESEIIPQKHEIKEWCQEHLDKLESRFG*
GOS2226_10272081	3300001943	Marine	LMGPKKFGERFHDICLGFGYRESEIIPAKMEIEEWCQEHLTHLESKFR*
Ga0066835_102220903	3300005606	Marine	VCLGFGYREAEIIPAKLEIEEWCREHLLHLESKFR*
Ga0075108_101064331	3300005913	Saline Lake	RFQHICFGFGYREAEIIPQKLEIKEWCQEHLDKLESRFR*
Ga0075117_11427504	3300005914	Saline Lake	ADRFQHICFGFGYREAEIIPQKLEIKEWCQEHLDKLESRFR*
Ga0075117_11812161	3300005914	Saline Lake	PDKFADRFQHICFGFGYREAEIIPQKLEIKEWCQEYLDKLESRFR*
Ga0075462_100524636	3300006027	Aqueous	CLGFGYREAEIIPAKMEIEEWCREHLDHLESKFR*
Ga0075461_101920593	3300006637	Aqueous	VCMGFGYREAEIIPAKMEIFDWCRDYLQGLENKFR*
Ga0070754_104800083	3300006810	Aqueous	FHNVCLGFGYREAEIIPAKMEIEEWCREHLTHLESKFR*
Ga0075476_102597533	3300006867	Aqueous	FAERFHNVCLGFGYREAEIIPAKMEIEEWCQEHLSHLESKFR*
Ga0075479_102044405	3300006870	Aqueous	KSFAERFHNVCLGFGYREAEIIPAKMEIEEWCREHLDHLESKFR*
Ga0070746_103941801	3300006919	Aqueous	ALMGPKKFGERFHDICLGFGYRESEIIPAKMEIEEWCQEHLTHLESKFR*
Ga0075460_103243211	3300007234	Aqueous	RFHDVCLGYGYREAEIIPAKEDIEDWCRDHLLHLENKFR*
Ga0099850_12895061	3300007960	Aqueous	QTFANRFQSVCMGFGYREAEIIPAKMEIFDWCRDYLQNLENKFR*
Ga0118687_104064141	3300009124	Sediment	PQTFAERFQSVCMGFGYREAEIIPAKLEIFDWCREYLQKMETKVR*
Ga0114995_100684561	3300009172	Marine	RFQHICFGFGYREAEIIPQKHEIKEWCQEHLDKLESRFR*
Ga0115551_12715851	3300009193	Pelagic Marine	GPDKFADRFQHICFGFGYREAEIIPAKNEIREWCQEHLDHLESKFR*
Ga0115548_12440423	3300009423	Pelagic Marine	GPKKFGERFHSICLGFGYRESEIIPAKMEIEEWCQEHLTHLESKFR*
Ga0115545_10389776	3300009433	Pelagic Marine	GPDKFADRFQHICFGFGYREAEIIPAKNEIREWCQEHLSHLESKFR*
Ga0115562_11190644	3300009434	Pelagic Marine	FHNICLGFGYREAEIIPAKMEIEEWCREHLEHLESKFR*
Ga0115559_13353061	3300009438	Pelagic Marine	LMGPKKFGERFHSICLGFGYRESEIIPLKMEIEEWCHEHLSHLESKFR*
Ga0115559_13381931	3300009438	Pelagic Marine	MGPKKFGERFHSICLGFGYRESEIIPAKMEIEEWCQEHLTHLESKFR*
Ga0115558_12933561	3300009449	Pelagic Marine	SICLGFGYRESEIIPLKMEIEEWCQEHLSHLESKFR*
Ga0115554_10847801	3300009472	Pelagic Marine	CFGFGYREAEIIPAKNEIRELCQEHLSHLESKFR*
Ga0115554_11334834	3300009472	Pelagic Marine	KKFGERFHSICLGFGYRESEIIPLKMEIEEWCQEHLSHLESKFR*
Ga0115571_11221771	3300009495	Pelagic Marine	CFGFGYREAEIIPAKNEIREWCQEHLDHLESKFR*
Ga0115003_107000733	3300009512	Marine	FQHICFGFGYREAEIIPQKHEIKEWCQEHLDKLESRFR*
Ga0115104_109640584	3300009677	Marine	QHICFGFGYREAEIIPAKNEIKEWCQEHLSHLESKFR*
Ga0115012_112391571	3300009790	Marine	KTFAKRFHDVCLGFGFREAEIIPAKMEIEEWCREHLLTLENKFR*
Ga0098059_13072601	3300010153	Marine	PEKFADRFQAICFGFGYREAEIIPTKNEIKEWCQEYLSHLESKFR*
Ga0129342_13531381	3300010299	Freshwater To Marine Saline Gradient	TFAERFHSVCMGFGYREAEIIPAKMEIEDWCREHLLHLENKFR*
Ga0136656_11353814	3300010318	Freshwater To Marine Saline Gradient	VCLGFGYREAEIIPAKMEIEEWCQDHLSHLESKFR*
Ga0129324_100652511	3300010368	Freshwater To Marine Saline Gradient	SVCMGFGYREAEIIPAKMEIFDWCRDYLQNLETKFR*
Ga0129324_101533951	3300010368	Freshwater To Marine Saline Gradient	RFADRFQSVCMGFGYREAEIIPAKMEIEEWCRDHLSHLESKFR*
Ga0163111_107668921	3300012954	Surface Seawater	MGPDKFADRFQAICLGFGYREAEIIPAKSEIKEWCQEHLNHLESKFR*
Ga0181369_10622601	3300017708	Marine	EDALMGPDKFGERFHSICLGFGYREAEIIPLKLEIIEWCREHLLHLESKFR
Ga0181369_10774941	3300017708	Marine	MGPKKFGERFHSICLGFGYRESEIIPAKMEMEEWCREHLSHLESKFR
Ga0181404_11406441	3300017717	Seawater	LMGPKKFGERFHSICLGFGYRESEIIPAKMEIEEWCQEHLSHLESKFR
Ga0181390_11267383	3300017719	Seawater	NHNICLGFGYREAEIIPMKMEIEEWCQEHLAHLESKFR
Ga0181398_10378181	3300017725	Seawater	RFQHICFGFGYREAEIIPAKNEIKEWCQEHLSHLESKFR
Ga0181389_10215297	3300017746	Seawater	GPKMFGERFHNICLGFGYREAEIIPMKMEIEEWCQEHLAHLESKFR
Ga0181389_12085442	3300017746	Seawater	NVCLGFGYREAEIIPTKIEIEEWCREHLLHLENKFR
Ga0181393_11312563	3300017748	Seawater	RERFHSICLGFGYRESEIIPAKMEIEEWCQEHLTHLESKFR
Ga0181420_10350161	3300017757	Seawater	FGERFHNICLGFGYREAEIIPAKNEIKEWCQEHLSHLESKFR
Ga0181385_10862265	3300017764	Seawater	ERFHNICLGFGYREAEIIPMKMEIEEWCQEHLAHLESKFR
Ga0181413_10447005	3300017765	Seawater	LMGPKMFGERFHNICLGFGYREAEIIPMKMEIEEWCQEHLAHLESKFR
Ga0181425_11308151	3300017771	Seawater	MGPDKFADRFQHICFGFGYREAEIIPAKNEIKEWCQEHLSHLESKFR
Ga0181424_103300173	3300017786	Seawater	MGPKMFGERFHNICLGFGYREAEIIPMKMEIEEWCQEHLAHLESKFR
Ga0181565_107258314	3300017818	Salt Marsh	HSVCLGFGYREAEIIPAKMEIEDWCREHLLHLESKFR
Ga0181552_102960321	3300017824	Salt Marsh	MTPQTFADRFQSVCMGFGYREAEIIPAKMEIFDWCRDYLQNLENKFR
Ga0181584_102244681	3300017949	Salt Marsh	AERFHSVCMGFGYREAEIIPAKMEIEDWCREHLLHLESKFR
Ga0181607_105224383	3300017950	Salt Marsh	DALMGPKKFGERFHNICLGFGYRESEIIPAKMEIEEWCREHLENLESKFR
Ga0181577_105697371	3300017951	Salt Marsh	KKFGERFHNICLGFGYRESEIIPAKMEIEDWCREHLEHLESKFR
Ga0181583_108487961	3300017952	Salt Marsh	MGPDKFGERFHNICLGFGYRESEIIPAKMEIEEWCREHLEHLESKFR
Ga0181590_103840641	3300017967	Salt Marsh	PQTFADRFQSVCMGFGYREAEIIPAKMEIFDWCRDYLQSLENKFR
Ga0181569_108617671	3300017986	Salt Marsh	TFAERFHNVCLGFGYREAEIIPAKMEIEEWCREHLLTLENKFR
Ga0181600_105058221	3300018036	Salt Marsh	ALMGPKKFGERFHNICLGFGYRESEIIPAKMEIEEWCREHLSHLESKFR
Ga0181606_100680121	3300018048	Salt Marsh	SPKTFAERFHSVCMGFGYREAEIIPAKMEIEDWCREHLLHLESKFR
Ga0181572_103213414	3300018049	Salt Marsh	ICLGFGYREAEIIPTKMEIEEWCREHLLHLESKFR
Ga0181572_103682324	3300018049	Salt Marsh	KTFAERFHNVCLGFGYREAEIIPAKMEIEEWCREHLLTLENKFR
Ga0181561_103255571	3300018410	Salt Marsh	PKKFGDRFHNICLGFGYREAEIIPAKIEIEEWCREHLSHLESKFR
Ga0181561_103453661	3300018410	Salt Marsh	RFQSVCMGFGYREAEIIPAKMEIFDWCRDYLQNLENKFR
Ga0181560_102952201	3300018413	Salt Marsh	ALMTPQTFADRFQSVCMGFGYREAEIIPAKMEIFDWCRDYLQNLETKFR
Ga0181559_102547164	3300018415	Salt Marsh	MGPKKFGERFHNICLGFGYRESEIIPAKMEIEDWCREHLSHLESKFR
Ga0181558_103535734	3300018417	Salt Marsh	RFHNICLGFGYRESEIIPAKMEIEDWCREHLEHLESKFR
Ga0181567_106649831	3300018418	Salt Marsh	FAERFHSVCLGFGFREAEIIPAKMEIEEWCREHLSHLENKFR
Ga0181591_107897481	3300018424	Salt Marsh	HSVCMGFGYREAEIIPAKMEIEDWCREHLLHLESKFR
Ga0181564_105038121	3300018876	Salt Marsh	KFGERFHNICLGFGYREAEIIPLKLEIIDWCREHLLHLESKFR
Ga0194029_10443811	3300019751	Freshwater	MTPQTFADRFQSVCMGFGYREAEIIPAKMELFDWCRDYLQNLENKFR
Ga0181595_102245594	3300020053	Salt Marsh	GERFHNICLGFGYRESEIIPAKMEIEQWCQEHLSHLESKFR
Ga0181605_104301533	3300020188	Salt Marsh	KFGERFHNICLGFGYRESEIIPAKMEIEQWCQEHLSHLESKFR
Ga0181597_104094583	3300020194	Salt Marsh	KKFGERFHNICLGFGYRESEIIPAKMEIEEWCQEHLTHLESKFR
Ga0211652_101640414	3300020379	Marine	PDKFADRFQYICFGFGYREAEIIPAKNEIKEWCQEHLSHLESKFR
Ga0211636_102511754	3300020400	Marine	FAERFQNVCMGFGYREAEIIPMKMEIEDWCREHLLHLESKFR
Ga0211521_103430531	3300020428	Marine	PKTFAERFQNVCLGFGYREAEIIPAKSEIEEWCREHLLHLESKFR
Ga0211576_106253031	3300020438	Marine	ICFGFGYREAEIIPAKNEIKEWCQEHLSHLESKFR
Ga0181557_12009663	3300020601	Salt Marsh	ALMGPKKFGERFHNICLGFGYRESEIIPAKMEIEDWCREHLEHLESKFR
Ga0222718_101682221	3300021958	Estuarine Water	ADRFQHVCFGFGYREAEIIPQKHEIKEWCQEHLDKLEGRFR
Ga0222716_103755175	3300021959	Estuarine Water	QSVCMGFGYREAEIIPAKMEIEEWCREHLLHLESKFR
Ga0222716_103824584	3300021959	Estuarine Water	KKFGERFHNICLGFGYRESEIIPAKMEIEEWCQEHLSHLESKFR
Ga0222715_103486841	3300021960	Estuarine Water	VCLGYGYREPEIIPAKEEIEDWCREHLLHLESKFR
Ga0222719_105508503	3300021964	Estuarine Water	KKFGERFHNICLGFGYRESEIIPAKMEIEEWCREHLSHLESKFR
Ga0196901_11763071	3300022200	Aqueous	DRFHSVCLGFGYREAEIIPAKMEIEDWCREHLLHLESKFR
Ga0255765_12164321	3300022921	Salt Marsh	MGPKKFGERFHNICLGFGYRESEIIPAKMEIEQWCQEHLSHLESKFR
Ga0255783_103232723	3300022923	Salt Marsh	LMGPKKFGERFHNICLGFGYRESEIIPAKMEIEEWCREHLEHLESKFR
Ga0255752_102808491	3300022929	Salt Marsh	FHNICLGFGYRESEIIPAKMEIEDWCREHLEHLESKFR
Ga0255770_101156415	3300022937	Salt Marsh	DALMGPKKFGERFHNICLGFGYRESEIIPAKMEIEDWCREHLSHLESKFR
Ga0255770_101513125	3300022937	Salt Marsh	FHSVCMGFGYREAEIIPAKMEIEDWCREHLLHLESKFR
Ga0255776_101792141	3300023173	Salt Marsh	ALMGPKKFGERFHNICLGFGYRESEIIPAKMEIEEWCREHLEHLESKFR
Ga0255776_103000484	3300023173	Salt Marsh	LMGPKKFGERFHNICLGFGYRESEIIPAKMEIEDWCREHLSHLESKFR
Ga0222676_10299604	3300023240	Saline Water	LMSPKKFAERFHSVCLGFGYREAEIIPMKFEIEQWCQEHLDHLESRFR
Ga0209535_11055834	3300025120	Marine	RFQHICFGFGYREAEIIPQKHEIKEWCQEYLDKLESRFR
Ga0209535_11277351	3300025120	Marine	RFQHICFGFGYREAEIIPMKSEIKEWCQEHLDHLESKFR
Ga0208919_11557761	3300025128	Marine	ALMGPKKFGERFHNICLGFGYREAEIIPAKMEMEEWCQGHLSHLESKFR
Ga0209557_11211491	3300025483	Marine	QHICFGFGYREAEIIPQKHEIREWCQEHLDKLESRFR
Ga0208903_10914204	3300025502	Saline Lake	ADRFQHICFGFGYREAEIIPQKLEIKEWCQEHLDKLESRFR
Ga0209195_11161881	3300025590	Pelagic Marine	KKFGERFHSICLGFGYRESEIIPAKMEIEEWCQEHLTHLESKFR
Ga0208768_10724665	3300025601	Saline Lake	RFQHICFGFGYREAEIIPQKLEIKEWCQEHLDKLESRFR
Ga0208149_10575515	3300025610	Aqueous	AERFHSVCLGFGYREAEIIPAKMEIEDWCREHLLHLESKFR
Ga0208149_11394801	3300025610	Aqueous	SVCMGFGYREAEIIPAKMELFDWCRDYLQNLENKFR
Ga0209406_11614191	3300025694	Pelagic Marine	MGPKKFGERFHSICLGFGYRESEIIPAKMEIEEWCQEHLTHLESKFR
Ga0208425_11260681	3300025803	Aqueous	SVCMGFGYREAEIIPAKMEIFDWCRDYLQNLENKFR
Ga0208542_12081851	3300025818	Aqueous	RFHDVCLGYGYREAEIIPAKEDIEDWCRDHLLHLENKFR
Ga0209631_105239883	3300025890	Pelagic Marine	PKKFGERFHSICLGFGYREAEIIPLKMEIEQWCEEHLGKLESKFI
Ga0209630_101856261	3300025892	Pelagic Marine	FAERFHNVCLGFGYREAEIIPAKMEIEEWCREHLEHLESKFR
Ga0209425_101054485	3300025897	Pelagic Marine	PDKFADRFQHICFGFGYREAEIIPAKNEIREWCQEHLSHLESKFR
Ga0209929_11135454	3300026187	Pond Water	QSVCMGFGYREAEIIPAKMEIFDWCRDYLQNLENKFR
Ga0209929_11687041	3300026187	Pond Water	ADRFQSVCMGFGYREAEIIPAKMEIFDWCRDYLQNLETKFR
Ga0233450_102760941	3300028115	Salt Marsh	FGERFHNICLGFGYRESEIIPAKMEIEDWCREHLEHLESKFR
Ga0257114_12615811	3300028196	Marine	ALMGPDKFADRFQHICFGFGYREAEIIPMKLEIKEWCQEHLDHLESKFR
Ga0307488_107439141	3300031519	Sackhole Brine	MSADKFADRFQHICFGFGYREAEIIPQKHEIKEWCQEYLDKLESRFR
Ga0307488_108095602	3300031519	Sackhole Brine	MSPDKFADRFQHICFGFGYREAEIIPQKHEIKEWCQEHLDKLESRFR
Ga0302137_12768544	3300031588	Marine	MSPKKFAERFHSVCLGFGYREAEIIPMKFEIEQWCQEHLDKLESRFR
Ga0302131_12872944	3300031594	Marine	HICFGFGYREAEIIPQKHEIKEWCQEHLDKLESRFR
Ga0302134_103786523	3300031596	Marine	QHICFGFGYREAEIIPQKHEIKAWCQEHLDKLESRFR
Ga0302121_100970565	3300031626	Marine	QHICFGFGYREAEIIPQKHEIKEWCQEHLDKLESRFR
Ga0302121_101116954	3300031626	Marine	FQHICFGFGYREAEIIPQKHEIKEWCQEHLDKLESRFR
Ga0302121_101200611	3300031626	Marine	QHICFGFGYREAEIIPQKHEIKEWCQEHLDKLEGRFR
Ga0302118_105496712	3300031627	Marine	ICFGFGYREAEIIPQKHEIKEWCQEYLDKLESRFR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069443

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences