Metagenome / Metatranscriptome Family F069431

Overview

Basic Information

• Family ID: F069431
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 124
• Average Sequence Length: 42 residues
• Representative Sequence: PPAGCRALLDWLAGIVGPIDGDRPFGEDLERLIEAPWPPA
• Number of Associated Samples: 105
• Number of Associated Scaffolds: 124

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 98.39 %
• % of genes from short scaffolds (< 2000 bps): 87.90 %
• Associated GOLD sequencing projects: 101
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (84.677 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.839 % of family members)
• Environment Ontology (ENVO): Unclassified (27.419 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (51.613 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 30.88%
  β-sheet: 0.00%
  Coil/Unstructured: 69.12%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00710	Asparaginase	5.65
PF01479	S4	5.65
PF01420	Methylase_S	3.23
PF00583	Acetyltransf_1	3.23
PF07690	MFS_1	2.42
PF00441	Acyl-CoA_dh_1	2.42
PF00528	BPD_transp_1	1.61
PF13673	Acetyltransf_10	1.61
PF07592	DDE_Tnp_ISAZ013	1.61
PF11017	DUF2855	1.61

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0252	L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D	Translation, ribosomal structure and biogenesis [J]	11.29
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	3.23
COG0732	Restriction endonuclease S subunit	Defense mechanisms [V]	3.23
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	2.42
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	1.61
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	1.61
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	1.61
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	1.61
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.61
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.81

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.48 %
Unclassified	root	N/A	14.52 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.48 %
Unclassified	root	N/A	14.52 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.68 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.81 %
Unclassified	root	N/A	14.52 %

Level 4

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	1.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	69.35 %
Unclassified	root	N/A	14.52 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.81 %

Level 5

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	68.55 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.81 %
Unclassified	root	N/A	14.52 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.61 %

Level 6

Name	Rank	Taxonomy	Distribution
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	51.61 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.81 %
Unclassified	root	N/A	14.52 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.61 %

Level 7

Name	Rank	Taxonomy	Distribution
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.81 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	1.61 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.81 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.61 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	12.90 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.42 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.61 %
Unclassified	root	N/A	14.52 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	4.84 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.61 %

Level 8

Name	Rank	Taxonomy	Distribution
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.84 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1.61 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.81 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.61 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.42 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.81 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	0.81 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.81 %
Unclassified	root	N/A	14.52 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	12.90 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.61 %

Level 9

Name	Rank	Taxonomy	Distribution
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.84 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	0.81 %
Couchioplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes	0.81 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	0.81 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.81 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.81 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.61 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	12.90 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.42 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.81 %
Unclassified	root	N/A	14.52 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.61 %

Level 10

Name	Rank	Taxonomy	Distribution
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.84 %
Couchioplanes caeruleus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	0.81 %
Geodermatophilus amargosae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus amargosae	0.81 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.81 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.61 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	12.90 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	0.81 %
Streptomyces lunaelactis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces lunaelactis	2.42 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.81 %
Unclassified	root	N/A	14.52 %
unclassified Blastococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.61 %

Level 11

Name	Rank	Taxonomy	Distribution
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.84 %
Blastococcus sp. TF02-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. TF02-9	0.81 %
Couchioplanes caeruleus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	0.81 %
Geodermatophilus amargosae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus amargosae	0.81 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.81 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.81 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.61 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	12.90 %
Streptomyces lunaelactis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces lunaelactis	2.42 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.81 %
Unclassified	root	N/A	14.52 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.61 %

Level 12

Name	Rank	Taxonomy	Distribution
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.84 %
Blastococcus sp. TF02-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. TF02-9	0.81 %
Couchioplanes caeruleus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	0.81 %
Geodermatophilus amargosae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus amargosae	0.81 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.81 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.81 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.61 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	12.90 %
Streptomyces lunaelactis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces lunaelactis	2.42 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.81 %
Unclassified	root	N/A	14.52 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.61 %

Level 13

Name	Rank	Taxonomy	Distribution
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.84 %
Blastococcus sp. TF02-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. TF02-9	0.81 %
Couchioplanes caeruleus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	0.81 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	0.81 %
Geodermatophilus amargosae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus amargosae	0.81 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.81 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.61 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	12.90 %
Streptomyces lunaelactis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces lunaelactis	2.42 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.81 %
Unclassified	root	N/A	14.52 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.61 %

Level 14

Name	Rank	Taxonomy	Distribution
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.84 %
Blastococcus sp. TF02-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. TF02-9	0.81 %
Couchioplanes caeruleus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	0.81 %
Geodermatophilus amargosae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus amargosae	0.81 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	0.81 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.81 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.61 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	12.90 %
Streptomyces lunaelactis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces lunaelactis	2.42 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.81 %
Unclassified	root	N/A	14.52 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.61 %

Level 15

Name	Rank	Taxonomy	Distribution
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.84 %
Blastococcus sp. TF02-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. TF02-9	0.81 %
Couchioplanes caeruleus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	0.81 %
Geodermatophilus amargosae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus amargosae	0.81 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.81 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	0.81 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.61 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	12.90 %
Streptomyces lunaelactis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces lunaelactis	2.42 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.81 %
Unclassified	root	N/A	14.52 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.61 %

Level 16

Name	Rank	Taxonomy	Distribution
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.84 %
asterids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids	0.81 %
Blastococcus sp. TF02-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. TF02-9	0.81 %
Couchioplanes caeruleus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	0.81 %
Geodermatophilus amargosae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus amargosae	0.81 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.81 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.61 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	12.90 %
Streptomyces lunaelactis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces lunaelactis	2.42 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.81 %
Unclassified	root	N/A	14.52 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.61 %

Level 17

Name	Rank	Taxonomy	Distribution
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.84 %
Blastococcus sp. TF02-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. TF02-9	0.81 %
Couchioplanes caeruleus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	0.81 %
Ericales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → Ericales	0.81 %
Geodermatophilus amargosae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus amargosae	0.81 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.81 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.61 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	12.90 %
Streptomyces lunaelactis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces lunaelactis	2.42 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.81 %
Unclassified	root	N/A	14.52 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.61 %

Level 18

Name	Rank	Taxonomy	Distribution
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.84 %
Blastococcus sp. TF02-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. TF02-9	0.81 %
Couchioplanes caeruleus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	0.81 %
Geodermatophilus amargosae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus amargosae	0.81 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.81 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.61 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	12.90 %
Streptomyces lunaelactis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces lunaelactis	2.42 %
Theaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → Ericales → Theaceae	0.81 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.81 %
Unclassified	root	N/A	14.52 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.61 %

Level 19

Name	Rank	Taxonomy	Distribution
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.84 %
Blastococcus sp. TF02-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. TF02-9	0.81 %
Couchioplanes caeruleus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	0.81 %
Geodermatophilus amargosae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus amargosae	0.81 %
Gordonia	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → Ericales → Theaceae → Gordonia	0.81 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.81 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.61 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	12.90 %
Streptomyces lunaelactis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces lunaelactis	2.42 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.81 %
Unclassified	root	N/A	14.52 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.61 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000955|JGI1027J12803_107061353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1004
3300001593|JGI12635J15846_10546180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	679
3300002245|JGIcombinedJ26739_100148149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	2217
3300003505|JGIcombinedJ51221_10034924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1850
3300004082|Ga0062384_100248069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1078
3300004092|Ga0062389_101796661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	793
3300004157|Ga0062590_103036259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	503
3300005344|Ga0070661_100175703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1628
3300005435|Ga0070714_101703984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	616
3300005441|Ga0070700_100735962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	788

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.16%
Host-Associated	Host-Associated	4.84%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	10.48%
Plants	Host-Associated → Plants	4.84%
Terrestrial	Environmental → Terrestrial	84.68%

Category

Habitat	Taxonomy	Distribution
Cave	Environmental → Terrestrial → Cave	0.81%
Freshwater	Environmental → Aquatic → Freshwater	8.87%
Peat	Environmental → Terrestrial → Peat	2.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.84%
Sediment	Environmental → Aquatic → Sediment	0.81%
Soil	Environmental → Terrestrial → Soil	81.45%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.81%

Type

Habitat	Taxonomy	Distribution
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.81%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.81%
Loam	Environmental → Terrestrial → Soil → Loam	12.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.23%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.81%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.06%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.45%

Subtype

Habitat	Taxonomy	Distribution
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.84%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.06%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.61%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.58%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.23%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.81%

Habitat

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.81%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.81%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.42%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.61%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.23%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.03%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.61%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.81%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.42%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.81%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.03%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.61%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.81%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.03%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.42%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.81%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1070613533	3300000955	Soil	LLLDWLAGIVDPIEEDRPFGEDIERLIGAPWPPA*
JGI12635J15846_105461803	3300001593	Forest Soil	PVRTLLDWLAGIIAPIDDDRPFGEDLQHLIEAPVTCFP*
JGIcombinedJ26739_1001481491	3300002245	Forest Soil	RALLDWLAGIVGPIDGDRPFGEDLQHLIETPWPPA*
JGIcombinedJ51221_100349243	3300003505	Forest Soil	SGLGGRAPTDRCAALLDWLAGIIGPIDGDRTFGEDIERLINAPWPPA*
Ga0062384_1002480692	3300004082	Bog Forest Soil	DRPPPAGSRALLAWLAGIIAPIDGDRPFGEDLQRLIEATWPPAQTT*
Ga0062389_1017966612	3300004092	Bog Forest Soil	PAGSRALLAWLAGIIAPIDGDRPFGEDLQRLIEATWPPAQTT*
Ga0062590_1030362592	3300004157	Soil	GFQAAALSGPPPPAGSRVLLDWLAGIVDPIEEDRPFGEDIERLIGAPWPPA*
Ga0070661_1001757034	3300005344	Corn Rhizosphere	QAAALSGPPPAGSRVLLDWLAGIVDPIVEDRPFGEDIERLIGAPWPPA*
Ga0070714_1017039842	3300005435	Agricultural Soil	GYQATALSGRPPAAGCRALLDWLAGIVGVIDDDRPFGEDLQHLIEAPWPPA*
Ga0070700_1007359621	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	PPPAGSRVLLDWLAGIVDPIEEDRPFGEDIERLIGAPWPPA*
Ga0070706_1017159322	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	SGQPAPAGSRALLDWLGGLVDPIEDDRPFGEDIERLTGASWPPA*
Ga0070730_110132621	3300005537	Surface Soil	GCRALLDWLAGIVGVIDDDRPFGEDLQHLIEAPWPPAL*
Ga0070731_107041463	3300005538	Surface Soil	GSRALLEWLAGIVAPIDGDRPFGEDLQHLIEAPWPPA*
Ga0070761_105181293	3300005591	Soil	RALLDWLAGIIAPIDGDRPFGEDLQHLIEASWPPA*
Ga0070762_112609492	3300005602	Soil	ALSGRPQPAGSRLLLDWLAGIVDPIEEDRPFGEDIERLITAPWPPA*
Ga0070717_105073384	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VDWLAGVIGPIEDDRPFGEDLERLTEASFTPPATA*
Ga0070717_109600283	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LSGPPPPAGSRVLLDWLAGIVDPIEEDRPFGEDIERLIGAPWPPA*
Ga0075017_1009576602	3300006059	Watersheds	CRALLDWMAVIVGPIDGDRPFGEDIERLIQAPWPPA*
Ga0066709_1036381722	3300009137	Grasslands Soil	AGFEAAALSGRLPPAGSRVLLDWLGGIVGPIEEDRPFGEDIERLAGAPWRPA*
Ga0116222_12767123	3300009521	Peatlands Soil	RPPPPGCRTLLDWMAVIVGPIDGDRPFGEDIERLVQAPWPPV*
Ga0105249_103531573	3300009553	Switchgrass Rhizosphere	LLDWLAGIVDPIEEDRPFGEDIERLIGAPWPPSDQPAA*
Ga0116215_10337451	3300009672	Peatlands Soil	RTLLDWMAVIVGPIDGDRPFGEDIERLVQAPWPPV*
Ga0116216_100836213	3300009698	Peatlands Soil	SRALLDWLAGIIGPIEGDRPFGEDLERLIGAPWPPS*
Ga0116217_104304962	3300009700	Peatlands Soil	LAERPPPPGCRALLDWLTVIIGPIDGDRTFGEDIERLIQAPWPPVAG*
Ga0126318_100706911	3300010152	Soil	QAAALSGQPPPDGCRALLDWLSGIVDPIDHDRPFGEDLERLIGAPWPPA*
Ga0126376_131604722	3300010359	Tropical Forest Soil	RALLGWLAGIIPPIEEDRLFGEDIERLIQAPWPPA*
Ga0126372_108488164	3300010360	Tropical Forest Soil	RPPSAGSRALLDWLSGIVDPIDGDRPFGEDLERLIGAPWPPD*
Ga0126372_111028712	3300010360	Tropical Forest Soil	PSAGSRALLDWLSGIVDPIDGDRPFGEDLERLIDAPWPPD*
Ga0134125_114748813	3300010371	Terrestrial Soil	ALSGPPPPAGSRVLLDWLAGIVDPIEEDRPFGEDIERLIGAPWPPA*
Ga0134125_126194592	3300010371	Terrestrial Soil	GSRVLLDWLAGIVDPIEEDRPFGEDIERLIAAPWPV*
Ga0134125_126624461	3300010371	Terrestrial Soil	RVLLDWLAGIVDPIEEDRPFGEDIERLIGAPWPPA*
Ga0126381_1043219891	3300010376	Tropical Forest Soil	AGSRALLDWLGDIVGLIDGDRPFGVDLERLIEAPWPPA*
Ga0136449_1043688512	3300010379	Peatlands Soil	ERPPTDPARALLEWLAGIIAPIDGDRPFGEDLQRLIEAPWPPA*
Ga0134126_110171192	3300010396	Terrestrial Soil	SRLLLDWLAGIVDPIEEDRPFGEDIERLIATPWPPD*
Ga0126383_120881942	3300010398	Tropical Forest Soil	AGRAPTGRIGALLDWLAGIITPIDGDRPFGEDLERLIAAPGPPG*
Ga0126361_105615221	3300010876	Boreal Forest Soil	ALSERAPPPGCRALLDWLAVIVGPIDGDRPFGEDIERLIQAPWPPAAG*
Ga0126361_108850901	3300010876	Boreal Forest Soil	AALSGREPPAGGRPVLDWLAGLVAPIEADRPFGEDIQRLIEAPWPRA*
Ga0126350_116395303	3300010880	Boreal Forest Soil	PPAGSRALLDWLAGIIAPIDGDRPFGEDLQHLIEAPWPPA*
Ga0150983_149748071	3300011120	Forest Soil	ERPPTDRARALLDWLAGIVAPIDGDRPFGEDLQHLIEAPWPPA*
Ga0137362_111060981	3300012205	Vadose Zone Soil	AAALSGRPAPAGSRALLDWLTGIIAPIDGDRPFGEDLQHLIDTPWPPA*
Ga0137410_105488322	3300012944	Vadose Zone Soil	AAALSGRPPPAGSRLLLDWLAGIVDPIEEDRPFGEDIEHLIAAPWPPA*
Ga0157370_102670711	3300013104	Corn Rhizosphere	PAGSRVLLDWLAGIVDPIEEDRPFGEDIERLIGAPWPPA*
Ga0157369_109521621	3300013105	Corn Rhizosphere	AGSRVLLDWLAGIVDPIVEDRPFGEDIERLIGAPWPPA*
Ga0157372_114224472	3300013307	Corn Rhizosphere	SAGSRVLLDWLAGIGDPIEEDRPFGEDIERLIGAPWPPSDQPAA*
Ga0182040_115096052	3300016387	Soil	PPAGCRPLLDWLSGIVDPIADDRPFGEDLERLIVAPWPPA
Ga0134074_13310691	3300017657	Grasslands Soil	QAAALSGRPPPAGSRLLLDWLAGIVDPIEEDRPFGEDIERLAGAPWPPA
Ga0187807_10195104	3300017926	Freshwater Sediment	RALLDWLAGIIGPIEGDRPFGEDLERLIAAPWLPGTPATG
Ga0187807_11791362	3300017926	Freshwater Sediment	PPAGSRALLEWLAGIVAPIDGDRPFGEDLQRLIEAPWPPA
Ga0187809_102101531	3300017937	Freshwater Sediment	SRALLDWLAGIIAPIDGDRPFGEDLQRLIEAPWPAV
Ga0187781_100865314	3300017972	Tropical Peatland	AAALSERPPPPTCAALLDWLAGIIDPIEGDRPFGEDIERLISASWPSP
Ga0187777_110111871	3300017974	Tropical Peatland	RALLDWLAGLVPPIDEDRAFGEDLERLIQAPWPPA
Ga0187815_100772303	3300018001	Freshwater Sediment	RPPPPGCRTLLDWMAVIVGPTDGDCPFGEDIERLIQAPWPPA
Ga0187815_104956791	3300018001	Freshwater Sediment	PPPTGSRALLGWLAGIIGPIDGDRPFGEDIERLIGAPWSSA
Ga0187804_104541401	3300018006	Freshwater Sediment	LLDWLAGLIGPIEGDRPFGEDLERLIAAPWPPPTAS
Ga0187883_104971852	3300018037	Peatland	LAGLSGRAPTEPSRALLDWLSGIIAPIDGDRPFGEDLERIVSASWPPA
Ga0187769_110571382	3300018086	Tropical Peatland	DWLAGIVGPIDGDRPFGEDIERLARTPWPGPDQAAGA
Ga0210407_105561271	3300020579	Soil	PPGGCRPLLDWLAGIVDPIGEDRPFGEDIERLIAAPWTRPD
Ga0210395_100386517	3300020582	Soil	PTDPARALLDWLAGIIAPIDGDRPFGEDLQHLIEASWPPA
Ga0210396_108269061	3300021180	Soil	PPGCQPLLDWLAVIVGPIEDDRPFGEDIERLIQAPWPPA
Ga0210388_104182431	3300021181	Soil	PPAGCQPLLDWLAVIVGPIDDDRPFGEDIERLIQAPWPPA
Ga0210385_110895062	3300021402	Soil	GCRALLDWLAEIVGPIDDDRPFGEDIERLIQAPWPPA
Ga0210397_100109988	3300021403	Soil	YQTAALSRQPPPAGCRALLDWLSGIVDPIDGDRPFGEDLERLIGAPWPPA
Ga0210387_101460041	3300021405	Soil	AGCRELLDWLAVIVGRIDGDRPFGVDIEHLIQAPWPPA
Ga0210387_105907352	3300021405	Soil	GYQAAALSGRPAPSGCQALLDWLAEIVGPIDGDRPFGQDIERLVQALWLSDQPAPRRPRT
Ga0187846_104457233	3300021476	Biofilm	AAGSRQLLEWLASIVGPIEGDRPFGEDIERLIHAPWPPA
Ga0210410_104800562	3300021479	Soil	GCRPLLDWLAGIVDPIGEDRPFGEDIERLIAAPWTRPD
Ga0247691_10433193	3300024222	Soil	GSRVLLDWLAGIVDPIVEDRPFGEDIERLIGAPWPPA
Ga0207416_10793511	3300025134	Iron-Sulfur Acid Spring	LSGFSGHPPAGSRALLDWLAGIIAPIDGDRPFGEDLQHLIEAPWPPGP
Ga0207705_105268973	3300025909	Corn Rhizosphere	AALSGPPPAGSRVLLDWLAGIVDPIVEDRPFGEDIERLIGAPWPPA
Ga0207660_101473454	3300025917	Corn Rhizosphere	AAALSGPPPPAGSRVLLDWLAGIVDPIEEDRPFGEDIERLIGAPWPPA
Ga0179587_107845801	3300026557	Vadose Zone Soil	GYQAAALSGRPPPAGSRLLLDWLAGIVDPIEEDRPFGEDIEHLIAAPWPPA
Ga0209333_12038742	3300027676	Forest Soil	DPVRTLLDWLAGIIAPIDDDRPFGEDLQHLIEAPWPPGVTCFP
Ga0209772_103083221	3300027768	Bog Forest Soil	ALSWFSERPPTDPARALLDWLAGIIAPIDGDRPFGEDLQHLIEAPWPQA
Ga0209274_101282064	3300027853	Soil	PPGCAALLDWLGGIVPPIEGDRPFGEDIERLIRGPWPHP
Ga0209274_103761901	3300027853	Soil	LAGYQAAALSGFPERPPTDPARALLDWLAGIIAPIDGDRPFGEDLQHLIEAAWPPA
Ga0209167_102306343	3300027867	Surface Soil	AGCPPSADGPLPAGCRALLDWLAGIIGVIDGDRPFGEDLEDLIEAPWPPA
Ga0307307_100306171	3300028718	Soil	AGSRVLLDWLAGIVDPIEEDRPFGEDIERLIAAPWPPA
Ga0302219_100994322	3300028747	Palsa	GCRALLDWLSVIIGPIDGDRPFGEDIERLIQAPWPGL
Ga0302231_105272151	3300028775	Palsa	PPPGCRALLDWLSVIIGPIDGDRPFGEDIERLIQAPWPGL
Ga0307296_106097022	3300028819	Soil	PPAGSRVLLDWLAGIVDPIEEDRPFGEDIERLIAAPWPPA
Ga0308309_102523231	3300028906	Soil	QPAGSRLLLDWLAGIVDPIEEDRPFGEDIERLITAPWPPA
Ga0311338_102251171	3300030007	Palsa	RELLEWLAGIIAPIAGDRPFGEDIERVIEAGPVSWLPAAV
Ga0318571_100177352	3300031549	Soil	ALSGRPPPAGSRALLDWLSGIVDPIDGDRPFGEDLERLISTPWPPA
Ga0318573_102453471	3300031564	Soil	SPAGSRALLDWLSAIVDPIEADRPFGEDLERLIGAPWPPA
Ga0318573_105292902	3300031564	Soil	APPPPGSRALLDWLTDIVGPIDGDRPFGEDLERLIAAPWPPA
Ga0318555_104354542	3300031640	Soil	SRSGRPPPPGGRALLDWLAGIIGPIEGDRTFGEDIEHVIGAGWPPTPG
Ga0318493_105297032	3300031723	Soil	LSGRPPPAGCQALLDWLGGIVDPIDGDRPFGEDLERLIDAPWPPH
Ga0318502_106987961	3300031747	Soil	YQAAALSGQPPPAGCRPLLDWLSGIVDPIADDRPFGEDLERLIVAPWPPA
Ga0318492_100717804	3300031748	Soil	ALSGQSPPVGSRALLDWVSEIVDPIDGDRPFGEDLERLISAPWPPD
Ga0318521_103088352	3300031770	Soil	SDRPPPAGCRVLLDWLTGIVGAIEGDRPFGEDLQRLIDAPWPPA
Ga0318547_100757773	3300031781	Soil	SDRPPPAGCRALLDWLAGIVGPIDGDRPFGEDLERLIEAPWPPA
Ga0318552_107438762	3300031782	Soil	AALSDRPPPAGCRVLLDWLTGIVGAIEGDRPFGEDLQRLIDAPWPPA
Ga0318529_104840382	3300031792	Soil	GRPPPAGCRALLDWLAGLVGPIDGDRPFGEDLDHLIEAPWPLA
Ga0318511_100410441	3300031845	Soil	TALSGRPPPPGGRALLDWLAGIIGPIEGDRTFGEDIEHVIGAGWPPTPG
Ga0318511_100721961	3300031845	Soil	RALLDWLAGLVGPIDGDRPFGEDLDHLIEAPWPLA
Ga0318495_101366732	3300031860	Soil	CGRPPPAGSRALLDWLAGIIGPIDGDRPFGEDLERLIGTEWPPGVTPP
Ga0318544_102299111	3300031880	Soil	SGRPPPAGSRALLDWLSGIVDPIDGDRPFGEDLERLISTPWPPA
Ga0306923_123067441	3300031910	Soil	QATALSGRPPPPGGRALLDWLAGIIGPIEGDRTFGEDIEHVIGAGWPPTPG
Ga0306926_120771912	3300031954	Soil	AALSAQPPPAGCRALLDWLSGLVEPIDADRPFGEDLERLIGAPWPPA
Ga0307479_118808892	3300031962	Hardwood Forest Soil	YQATALSGRPPAAGCRALLDWLAGIVGVIDDDRPFGEDLQHLIEAPWPPALWPPGALPPA
Ga0318562_103167851	3300032008	Soil	PLLDWLAGLIGPIDGDRPFGEDIERLVLAPWPGPDQAGGG
Ga0318562_105727191	3300032008	Soil	AALSGTPPPAGCRPLLDWLAGIIGPIDGDRPFGEDIERLVRTPWPGPDQAAGA
Ga0318569_100087761	3300032010	Soil	DSLAAVIGPIEADRPFGEDIERLAAASWPGAAAPE
Ga0318569_101663942	3300032010	Soil	SGRPPPAGSRALLGWLAGIVGPIDGDRPFGEDLERLIGTPWPPDVTPM
Ga0318558_104422371	3300032044	Soil	SDRPPPAGCRALLEWLACIVGPIDGDRPFGEDLERLIEAPWPPA
Ga0318506_101695571	3300032052	Soil	LSGRPPPPGGRALLDWLAGIIGPIEGDRTFGEDIEHVIGAGWPPTPG
Ga0318505_100806513	3300032060	Soil	PPAGCRALLDWLAGIVGPIDGDRPFGEDLERLIEAPWPPA
Ga0318513_103633601	3300032065	Soil	LAGRPPPAGSWALLDWLSAIVDPIEADRPFGEDLERLIGAPWPPA
Ga0318514_102345821	3300032066	Soil	RPAGSWALLDWLSAIVDPIDADRPFGEDLERLIGAPWPPT
Ga0318524_107919561	3300032067	Soil	PPAGSRALLDWVSEIVDPIDGDRPFGEDLERLISAPWPPD
Ga0306924_101804731	3300032076	Soil	AGSRALLDWLSAIVDPIDADRPFGEDLERLIGAPWPPA
Ga0311301_103393057	3300032160	Peatlands Soil	ALLDWLTVIIGPIDGDRTFGEDIERLIQAPWPPAAG
Ga0311301_113055893	3300032160	Peatlands Soil	PGCRTLLDWMAVIVGPIDGDRPFGEDIERLIQAPWPPA
Ga0307472_1000689884	3300032205	Hardwood Forest Soil	SGRPPPAGSRVLLDWLAGIVDPIEEDRPFGEDIERLIGAPWPPSDQPAA
Ga0306920_1001061511	3300032261	Soil	RALLDWLSAIVDPIDADRPFGEDLERLIGAPWPPA
Ga0306920_1008826903	3300032261	Soil	RALLDWLAGIVGPIDGDRPFGEDLERLIEAPWPPA
Ga0306920_1011766552	3300032261	Soil	GWLAGIVGPIDGDRPFGEDLERLIGTPWPPDVTPM
Ga0335085_109314121	3300032770	Soil	SGRPPAGSRVLLDWLSGIVDPIDGDRPFGEDLERLIGAPWPPD
Ga0335082_105112451	3300032782	Soil	RPPPAGSRALLDWVSGIVGPIDGDRPFGEDLERLIGAPWPPA
Ga0335075_103659783	3300032896	Soil	SLFAGCRGLLDWLAGIVGPIDGDRPFGEDIQHLIEAPWPPT
Ga0335075_103861671	3300032896	Soil	SDRSLFAGCQGLLDWLAGIVGPIDGDRPFGEDIQHLIEAPWPPT
Ga0335075_116650892	3300032896	Soil	GYQAMALSGSPPPTGCAALLDWLAGIIGPIDGDRPFGEDIERLIRAPWLPA
Ga0310914_101771951	3300033289	Soil	AGSRALLDWLSGIVDPIDGDRPFGEDLERLISTPWPPA
Ga0310914_112581731	3300033289	Soil	GCRALLDWLSGIVDPIDGDRPFGEDLERLIGAPWPPA