Metagenome / Metatranscriptome Family F069418

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069418
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	86 residues
Representative Sequence	MDEQDHPSNTREFMAMWNSVTAEHLTHKLTGVLQQLPGRLPDAPPLDDAQAAALSALLIRAFQVAASPEGGVHAAVQFLAEYGADAPA
Number of Associated Samples	109
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.71 %
% of genes near scaffold ends (potentially truncated)	28.23 %
% of genes from short scaffolds (< 2000 bps)	83.87 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.355 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.968 % of family members)
Environment Ontology (ENVO)	Unclassified (32.258 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.710 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.72% β-sheet: 0.00% Coil/Unstructured: 48.28%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00383	dCMP_cyt_deam_1	16.94
PF13472	Lipase_GDSL_2	4.84
PF12867	DinB_2	4.03
PF04978	DUF664	4.03
PF07609	DUF1572	1.61
PF07963	N_methyl	0.81
PF00583	Acetyltransf_1	0.81
PF07732	Cu-oxidase_3	0.81
PF00484	Pro_CA	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.81
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.35 %
Unclassified	root	N/A	5.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.35 %
Unclassified	root	N/A	5.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.35 %
Unclassified	root	N/A	5.65 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	66.13 %
Unclassified	root	N/A	5.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	66.13 %
Unclassified	root	N/A	5.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	62.90 %
Unclassified	root	N/A	5.65 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	62.90 %
Unclassified	root	N/A	5.65 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	61.29 %
Unclassified	root	N/A	5.65 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1.61 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	61.29 %
Unclassified	root	N/A	5.65 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	1.61 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	61.29 %
Unclassified	root	N/A	5.65 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1.61 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps__Contig_181528	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2009	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0707809	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2308	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_10629093	Not Available	524	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105631540	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	959	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105633821	Not Available	650	Open in IMG/M
3300000956\|JGI10216J12902_101333628	All Organisms → cellular organisms → Bacteria	2730	Open in IMG/M
3300000956\|JGI10216J12902_101543082	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	572	Open in IMG/M
3300003321\|soilH1_10020303	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2348	Open in IMG/M
3300003321\|soilH1_10275830	All Organisms → cellular organisms → Bacteria	3967	Open in IMG/M
3300003324\|soilH2_10321619	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1454	Open in IMG/M
3300003990\|Ga0055455_10038954	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1264	Open in IMG/M
3300004114\|Ga0062593_101760603	Not Available	679	Open in IMG/M
3300004156\|Ga0062589_102658860	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	520	Open in IMG/M
3300004463\|Ga0063356_102002012	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300004479\|Ga0062595_100660127	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300004643\|Ga0062591_100575265	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	989	Open in IMG/M
3300004643\|Ga0062591_102030966	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	593	Open in IMG/M
3300004780\|Ga0062378_10114699	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	680	Open in IMG/M
3300005178\|Ga0066688_10174752	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1355	Open in IMG/M
3300005181\|Ga0066678_10220835	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1217	Open in IMG/M
3300005332\|Ga0066388_101447516	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1197	Open in IMG/M
3300005332\|Ga0066388_101731126	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300005332\|Ga0066388_103191566	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	838	Open in IMG/M
3300005434\|Ga0070709_10480986	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	940	Open in IMG/M
3300005440\|Ga0070705_100898587	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	712	Open in IMG/M
3300005440\|Ga0070705_101015335	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	674	Open in IMG/M
3300005444\|Ga0070694_101305933	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	610	Open in IMG/M
3300005445\|Ga0070708_100346584	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300005445\|Ga0070708_100547724	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300005458\|Ga0070681_11364645	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	632	Open in IMG/M
3300005467\|Ga0070706_101409788	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	638	Open in IMG/M
3300005468\|Ga0070707_100013334	All Organisms → cellular organisms → Bacteria	7689	Open in IMG/M
3300005468\|Ga0070707_100255160	All Organisms → cellular organisms → Bacteria	1706	Open in IMG/M
3300005468\|Ga0070707_101558880	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300005526\|Ga0073909_10074345	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1291	Open in IMG/M
3300005536\|Ga0070697_100239308	All Organisms → cellular organisms → Bacteria	1550	Open in IMG/M
3300005546\|Ga0070696_100073921	All Organisms → cellular organisms → Bacteria	2403	Open in IMG/M
3300005556\|Ga0066707_10788912	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	588	Open in IMG/M
3300005564\|Ga0070664_102055191	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	542	Open in IMG/M
3300006163\|Ga0070715_10016924	All Organisms → cellular organisms → Bacteria	2750	Open in IMG/M
3300006173\|Ga0070716_100753674	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	749	Open in IMG/M
3300006575\|Ga0074053_10180558	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	507	Open in IMG/M
3300006580\|Ga0074049_12693557	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	658	Open in IMG/M
3300006845\|Ga0075421_102242217	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	575	Open in IMG/M
3300006852\|Ga0075433_10735490	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300006854\|Ga0075425_101489361	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	764	Open in IMG/M
3300009100\|Ga0075418_12466828	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	567	Open in IMG/M
3300009162\|Ga0075423_10627141	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1133	Open in IMG/M
3300010038\|Ga0126315_10420209	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300010396\|Ga0134126_10468810	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1455	Open in IMG/M
3300010399\|Ga0134127_12186493	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	632	Open in IMG/M
3300011119\|Ga0105246_10439626	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1093	Open in IMG/M
3300012205\|Ga0137362_10938481	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	738	Open in IMG/M
3300012207\|Ga0137381_11675509	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	526	Open in IMG/M
3300012212\|Ga0150985_100383669	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300012360\|Ga0137375_11107283	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	614	Open in IMG/M
3300012361\|Ga0137360_10630896	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	918	Open in IMG/M
3300012469\|Ga0150984_107271395	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	601	Open in IMG/M
3300012922\|Ga0137394_11383123	Not Available	565	Open in IMG/M
3300012930\|Ga0137407_10603441	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1030	Open in IMG/M
3300012951\|Ga0164300_11160500	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	509	Open in IMG/M
3300012955\|Ga0164298_10215076	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1134	Open in IMG/M
3300012955\|Ga0164298_10440578	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	854	Open in IMG/M
3300012957\|Ga0164303_10290513	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	958	Open in IMG/M
3300012957\|Ga0164303_11274479	Not Available	542	Open in IMG/M
3300012958\|Ga0164299_11614024	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	511	Open in IMG/M
3300012986\|Ga0164304_10115783	All Organisms → cellular organisms → Bacteria	1628	Open in IMG/M
3300012986\|Ga0164304_11584927	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	545	Open in IMG/M
3300012987\|Ga0164307_10786281	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	755	Open in IMG/M
3300012989\|Ga0164305_10726317	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	815	Open in IMG/M
3300014325\|Ga0163163_10094109	All Organisms → cellular organisms → Bacteria	3013	Open in IMG/M
3300015264\|Ga0137403_10043170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4689	Open in IMG/M
3300015371\|Ga0132258_11882523	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1506	Open in IMG/M
3300015371\|Ga0132258_12916040	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300015372\|Ga0132256_102110454	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	669	Open in IMG/M
3300018028\|Ga0184608_10221771	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	830	Open in IMG/M
3300018059\|Ga0184615_10636497	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	551	Open in IMG/M
3300018071\|Ga0184618_10116563	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300018429\|Ga0190272_10877177	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	838	Open in IMG/M
3300018469\|Ga0190270_13392694	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	505	Open in IMG/M
3300018476\|Ga0190274_13719931	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	516	Open in IMG/M
3300019361\|Ga0173482_10520716	Not Available	581	Open in IMG/M
3300019377\|Ga0190264_10669051	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	759	Open in IMG/M
3300019889\|Ga0193743_1087714	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1202	Open in IMG/M
3300021078\|Ga0210381_10129147	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	844	Open in IMG/M
3300021080\|Ga0210382_10086046	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1293	Open in IMG/M
3300021090\|Ga0210377_10091376	All Organisms → cellular organisms → Bacteria	2044	Open in IMG/M
3300025324\|Ga0209640_11169661	Not Available	580	Open in IMG/M
3300025324\|Ga0209640_11264264	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	550	Open in IMG/M
3300025326\|Ga0209342_10147317	All Organisms → cellular organisms → Bacteria	2135	Open in IMG/M
3300025552\|Ga0210142_1001898	All Organisms → cellular organisms → Bacteria	4055	Open in IMG/M
3300025901\|Ga0207688_10817634	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	590	Open in IMG/M
3300025905\|Ga0207685_10436400	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	678	Open in IMG/M
3300025910\|Ga0207684_10452008	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300025912\|Ga0207707_11056334	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	664	Open in IMG/M
3300025922\|Ga0207646_10144959	All Organisms → cellular organisms → Bacteria	2140	Open in IMG/M
3300025939\|Ga0207665_11163525	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	615	Open in IMG/M
3300026088\|Ga0207641_11188577	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	762	Open in IMG/M
3300027831\|Ga0209797_10000294	All Organisms → cellular organisms → Bacteria	24543	Open in IMG/M
3300027840\|Ga0209683_10066737	All Organisms → cellular organisms → Bacteria	1595	Open in IMG/M
3300027843\|Ga0209798_10001141	All Organisms → cellular organisms → Bacteria	16232	Open in IMG/M
3300027909\|Ga0209382_10169657	All Organisms → cellular organisms → Bacteria	2518	Open in IMG/M
3300028587\|Ga0247828_10211311	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1018	Open in IMG/M
3300028711\|Ga0307293_10166485	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	702	Open in IMG/M
3300028715\|Ga0307313_10236442	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	568	Open in IMG/M
3300028768\|Ga0307280_10284171	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	601	Open in IMG/M
3300028771\|Ga0307320_10024619	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2179	Open in IMG/M
3300028784\|Ga0307282_10267744	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300028819\|Ga0307296_10817046	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	508	Open in IMG/M
3300028881\|Ga0307277_10009055	All Organisms → cellular organisms → Bacteria	3829	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1037313	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300031548\|Ga0307408_100239407	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1491	Open in IMG/M
3300031716\|Ga0310813_11219968	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	693	Open in IMG/M
3300031824\|Ga0307413_10171435	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1536	Open in IMG/M
3300031943\|Ga0310885_10731624	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	558	Open in IMG/M
3300031965\|Ga0326597_10202031	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2329	Open in IMG/M
3300032002\|Ga0307416_103632166	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	516	Open in IMG/M
3300032004\|Ga0307414_10309689	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300032005\|Ga0307411_11054989	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	730	Open in IMG/M
3300032074\|Ga0308173_11249682	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	695	Open in IMG/M
3300032075\|Ga0310890_11087037	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	647	Open in IMG/M
3300033412\|Ga0310810_10416119	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300033480\|Ga0316620_12194085	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	549	Open in IMG/M
3300033551\|Ga0247830_10505575	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	951	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.26%
Host-Associated	Host-Associated	17.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.58%
Plants	Host-Associated → Plants	17.74%
Aquatic	Environmental → Aquatic	9.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.10%
Freshwater	Environmental → Aquatic → Freshwater	5.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.84%
Sediment	Environmental → Aquatic → Sediment	2.42%
Marine	Environmental → Aquatic → Marine	1.61%
Roots	Host-Associated → Plants → Roots	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.00%
Loam	Environmental → Terrestrial → Soil → Loam	20.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.68%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.23%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.42%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.42%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.61%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.81%
Sand	Environmental → Terrestrial → Soil → Sand	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.45%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.03%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.23%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.42%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	2.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	14.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.26%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.03%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	3.23%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.42%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	2.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.42%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	2.42%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.61%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.61%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.81%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.81%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004780	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025326	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)	Environmental	Open in IMG/M
3300025552	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_03400160	2199352024	Soil	MDEASSRPANTREFMAMWNAVTAEHLTVKLTAALQQLGQRVPTAPPIGEAQAEALSPLLIHAFQVAAAPDGGVHAAVQFLAEYGAAPAP
ICChiseqgaiiDRAFT_07078095	3300000033	Soil	MDQPLSHPATTREFMAMWNAVTAEHLTAKLVAALQQLGQRVPNAPTLVEAQAEALSPLLIHAFQVAAAPEGGVHAAVQFLAEYGAAPTP*
ICChiseqgaiiFebDRAFT_106290931	3300000363	Soil	MDQPSGRPADTREFMAMWNAVTAEHLTHKLTAALQQLAQRVPNAPALEAAEAEVMAPLLIHAFQVAAAKEGGVHAAVQFLVEYGAPPPAPEP*
INPhiseqgaiiFebDRAFT_1056315402	3300000364	Soil	MDEAPSRPADTQEFIAMWNAVTAEHLTHKLTATLQQLGDRIPNAPVLRAAEAEALSPLLIHAFQVAAARDGGVHAAVQFLAEYGAAPTP*
INPhiseqgaiiFebDRAFT_1056338212	3300000364	Soil	MDEAPSRPADTQEFXAMWNAVTAEHLTHXLTATLQQLGDRIPNAPVLRAAEAEALSPLLIHAFQVAAARDGGVHAAVQFLAEYGAAPTP*
JGI10216J12902_1013336286	3300000956	Soil	MDDESRTPQDTREFVAMWNAVTAEHLTHKLTGVLQELGRRVPNVPTLDAAQAEALSPLLVRAFQVAASPEGGAHAAVQFLAEYGTQPTP*
JGI10216J12902_1015430822	3300000956	Soil	MDEQVDHPSNTREFMAMWNSVTAEHLTHKLTGVLQELPRRMPDAPRLDQAQAAALSTLLVRAFQVAASPEGGVHTAVQFIAEYGADAPA*
soilH1_100203032	3300003321	Sugarcane Root And Bulk Soil	MDQPSGRPADTREFMAMWNAVTAEHLTHKLTGALQELAQRVPDAPAFGAREAEVMAPLLIHAFQVAAAKEGGVHAAVQFLVEYGAPPSPEP*
soilH1_102758307	3300003321	Sugarcane Root And Bulk Soil	MDQPIGRPADTREFMAMWNAVTAEHLTHKLTGVLQELAQRAPGAPAMDAAGAETLAPLLVRAFQIASSPDGGPHAAVQFLAEYAPGPGA*
soilH2_103216192	3300003324	Sugarcane Root And Bulk Soil	MDDAQSHPADTREFMAMWNAVTAEHLTHKLTGVLQELAQRAPGAPAMDAAGAETLAPLLVRAFQIASSPDGGPHAAVQFLAEYAPGPGA*
Ga0055455_100389542	3300003990	Natural And Restored Wetlands	MDEQVDHPSNTREFIAMWNSVTAEHLTHKLTGVLQDLPGRLPAAPRLDEAQAAALSAVLVRAFQVAASPEGGVHTAVQFIAEYGADAPA*
Ga0062593_1017606031	3300004114	Soil	MDEASSRPANTREFMAMWNAVTAEHLTVKLAAALQQLGERVPNAPPIGEAQAEALSPLLIHAFQVAAAPEGGVHAAVQFLAEYGAAPAP*
Ga0062589_1026588601	3300004156	Soil	MDKEPSNPTNTREFMAMWNAVTAEHLTHKLVGVLQELGQRVPGVPALDPAQSEALAPLLVRAFQVAGSPEGGPHAAVQFLAEYAPDRMA*
Ga0063356_1020020121	3300004463	Arabidopsis Thaliana Rhizosphere	MDEQLSNPKNTREFMAMWNAVTAEHLTHKLTGVLLELGPRVSNAPVLGEAQAEALSPLLIRAFQVAASPEGGVHAAVQFLAEYGASPAP*
Ga0062595_1006601272	3300004479	Soil	MDQPSSRPADTREFMAMWNAVTAEHLTHKLAGALQELAQRVPDAPALGAAGAEVMAPLLIHAFQVAAAKDGGVHAAVQFLVEYGAPPAPEP*
Ga0062591_1005752651	3300004643	Soil	MDEASSRPANTREFMAMWNAVTAEHLTVKLAAALQQLGERVPNAPPIGEAQAEALSPLLIHAFQVAAAPEGGVHA
Ga0062591_1020309661	3300004643	Soil	MDDLSSRPANTREFMAMWNAVTAEHLTTKLTAALQQLGQRVPNAPAIGEAQAEALSPLLIHAFQVAAAPEGGVHAAVQFLVEYGATPAP*
Ga0062378_101146992	3300004780	Wetland Sediment	MDEQADHPSNTREFMAMWNSVTADHLTHKLTGVLRELFSRLPDAPPLDEAQAAALSALLIRAFQVSASPEGGVHAAVQFLAEYGADARA*
Ga0066688_101747521	3300005178	Soil	MDEIRNPADTREFMAMWNSVTADHLSHKLAGVLQQLSGRLPDTPVLDEAQAGALSPLLVRAFQVAASPEGGVHAAIQFLAEYRVDTSA*
Ga0066678_102208352	3300005181	Soil	MDEIRNPADTREFMAMWNSVTADHLSHKLAGVLQQLSGRLPDTPVLDEAQAGALSPLLVRAFQVAASPEGGVHAAIQFLAEYRVDTSG*
Ga0066388_1014475163	3300005332	Tropical Forest Soil	PSGRPPDTREFMAMWNAVTAEHLTHKLAEALQQFAQRVPDAPAFGPAQAEMMAPLLINAFQVAAAKDGGVHAAVQFLVEYGAPPAPEP*
Ga0066388_1017311262	3300005332	Tropical Forest Soil	MEQPSGRPPDTREFMAMWNAVTAEHLTHKLTGALQQLGQRVPNAPAIGAAEAEAMAPLLIHAFQVAASKDGGVHAAVQFLSEYGAPSAPSP*
Ga0066388_1031915661	3300005332	Tropical Forest Soil	MDQPSGRPPDTREFMAMWNAVTAEHLTHKLAEALQQFAQRVPNAPAFGPAQAEVMAPLLINAFQVAA
Ga0070709_104809862	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MDEAPSRPADTQEFIAMWNAVTAEHLTHKLTATLQQLGDRIPNAPVLRAAEAEALSPLLIHAFQVAASRDGGVHAAVQFLAEYGAAPTP*
Ga0070705_1008985871	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MDEQLSNPKNTREFMAMWNAVTAEHLTHKLTGVLVELGPRVPNAPILGEAQAEALSPLLIRAFQVAASAEGGVHAAVQFLAEYGASPAP*
Ga0070705_1010153351	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MDQPSGRPADTREFMAMWNAVTAEHLTHKLTVALQQLGERVPHAPTFAPAEAEAMAPLLIHAFQVAAAKDGGVHAAVQFLSEYGAAPAP*
Ga0070694_1013059331	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MDEELRHPANTREFMAMWNTVTAEHLTNKLTAVLPQLTSRIPEGPTLDETQAAALSPVLIRAFQVAASP
Ga0070708_1003465843	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MDEIRNPADTREFMAMWNSVTADHLSHKLAGVLQQLSGRLPDTPVLDEAQAGALSPLLVRAFQVAASPEGGVHAAVQFLAEYRVDTSA*
Ga0070708_1005477242	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MDEQLSNPKNTREFMAMWNAVTAEHLTHKLTGVLVELGPRVPNAPILGEAQAEALSPLLIRAFQVAASPEGGVHAAVQFLAEYGASPAP*
Ga0070681_113646451	3300005458	Corn Rhizosphere	MDEQVGNPSNTREFMAMWNSVTAEHLTHKLTGVLQDLPGRVPDAPRLDQAQAAALSALLVRAFQVAASPEGGVHTAVQFIAEYGADAPA*
Ga0070706_1014097881	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MDEQVDHPSNTREFMAMWNSVTAEHLAHKLTGVLQDLPDRLPNAPRLDEAQAAALSALLVRAFQVAASPEGGVHTAVQFIAEYGADAPA*
Ga0070707_10001333410	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MDEIRNPADTREFMAMWNSVTADHLSHKLAGVLQQLSGRLPDTPMLDEAQAGALSPLLVRAFQVAASPEGGVHAAVQFLAEYRVDTSA*
Ga0070707_1002551601	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MDEQVDHPSNTREFMAMWNSVTAEHLAHKLTGVLQDLPERLPNAPRLDEAQAAALSALLVRAFQVAASPEGGVHTAVQFIAEYGADAPA*
Ga0070707_1015588802	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	SNTREFMAMWNSVTAEHLAHKLTGVLQDLPDRLPNAPRLDEAQAAALSALLVRAFQVAASPEGGVHTAVQFIAEYGADAPA*
Ga0073909_100743452	3300005526	Surface Soil	MDEQVDHPANTSEFMAMWNSVTAEHLAHKLTGVLQDLPERLPNAPRLDEAQAAALSALLVRAFQVAASPEGGVHTAVQFIAEYGADAPA*
Ga0070697_1002393082	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MDEQVDHPSNTREFMAMWNSVTAEHMIHKLTGVLQELPARVPDAPRLDQAQAAALSALIVRAFQVAASPEGGVHTAVQFIAEYGADAPA*
Ga0070696_1000739214	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MDEELRHPANTREFMAMWNTVTAEHLTNKLTAVLPQLTSRIPEGPTLDETQAAALSPVLIRAFQVAASPEGGVHAAVQFLTEYAAAAPA*
Ga0066707_107889121	3300005556	Soil	MDEIRNPADTREFMARWNSVTADHLSHKLAGVLQQLSGRLPDTPVLDEAQAGALSPLLVRAFQVAASPEGGVHAAIQFLAEYRVDTS
Ga0070664_1020551911	3300005564	Corn Rhizosphere	MMDEPSSRPANTREFMAMWNAVTAEHLTVKLAAALQQLGQRVPNAPAIGETQAEALSPLLIHAFQVAAAPEGGVHAAVQFLAEYGAAPTG*
Ga0070715_100169245	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MDEAPSRPADTQEFIAMWNAVTAEHLTHKLTATLQQLGDRIPNAPVLRAAEAEALSPLLIHAFQVAASRDGGVHAA
Ga0070716_1007536742	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MDEIKNPADTREFMAMWNSVTADHLSHKLAGVLQQLSGRLPDTPMLDEAQAGALSPLLVRAFQVAASPEGGVHAAVQF
Ga0074053_101805582	3300006575	Soil	MDELSNPANTREFMAMWNAVTAEHLTHKLTGVLQQLRERVPNAPTFGEAQAEALSPLLIRAFQVAASP
Ga0074049_126935571	3300006580	Soil	MDELSNPANTREFMAMWNAVTAEHLTHKLTGVLQQLGERMPNAPTFGDGQAEALSPLLIRAFQVAASPEGGVHAAVQ
Ga0075421_1022422171	3300006845	Populus Rhizosphere	MDEQPSPKDTREFMAMWNSATADHLTHRLTGVLQDLSRKVAVPPLTEPQALGIAPVLVRAFQVAASPEGGVHAAIQFLAEYGGNTG*
Ga0075433_107354902	3300006852	Populus Rhizosphere	MDEQLSNPKNTREFMAMWNAVTAEHLTHKLTGVLVELGPRVPNAPILGEAQAEALSPLLIRAFQVAASPEGGVHAAVQFLAEYGVSPAP*
Ga0075425_1014893611	3300006854	Populus Rhizosphere	MMDEPSSRPANTREFMAMWNAVTAEHLTVKLAAALQQLGQRVPNAPAIGETQAEALSPLLIHAFQVAAAPEGGVHAAVQFLAEYGAAP
Ga0075418_124668282	3300009100	Populus Rhizosphere	MDEQPSPKDTREFMAMWNSATADHLTHRLTGVLQDLSRKVAAPPLTEPQALGIAPVLVRAFQVAASPEGGVH
Ga0075423_106271411	3300009162	Populus Rhizosphere	MDEPIDRPSNTREFMAMWNAVTAEHLTSKLTGTLQQLGQRVPNAPTFGAAEAEALAPLLIHAFQVAAAPDGGVHAAVQFLSEYGTTPAP*
Ga0126315_104202093	3300010038	Serpentine Soil	HAVASDPDPSRPEEEFMDEQAGNPTNTREFMAMWNSVTAEHLMHKLTGVLQDLPGRVPDAPRLDQAQAAALSALLVRAFQVAASPEGGVHTAVQFIAEYGADAPA*
Ga0134126_104688101	3300010396	Terrestrial Soil	MDENANNPANTREFMAMWNTVTADHLAHKLTGVLQQLARRLPAAALDEAQASGLAPLLVRAFQVAASPEGGVHAAVQFLAEYAADAPA*
Ga0134127_121864931	3300010399	Terrestrial Soil	MDEQVDHPSNTREFMAMWNSVTAEHLIHKLTGVLQLLPERVPDAPRLEQAQAAALSSLLVRAFQVAASPEGG
Ga0105246_104396262	3300011119	Miscanthus Rhizosphere	MDEQVDHPSNTREFMAMWNSVTAEHLMHKLTGVLQDLPGRVPDAPRLDQAQAAALSALLVRAFQVAAAPEGGVHTAVQFIAEYGSDAPA*
Ga0137362_109384813	3300012205	Vadose Zone Soil	MDEIRNPADTREFMAMWNSVTADHLSHKLAGVLQQLSGRLPDTPVLDEAQAGALSPPLVRAFQVAASPEGGVHAAIQFLAEYRVDPSA*
Ga0137381_116755091	3300012207	Vadose Zone Soil	MDEIRNPADTREFMARWNSVTADHLSHKLAGVLQQLSGRLPDTPVLDEAQAGALSPLLVRAFQVAASPEGGVHAAIQFLAEYRVDTSA*
Ga0150985_1003836691	3300012212	Avena Fatua Rhizosphere	IPCEEDLMDEQVDHPSNTREFMAMWNSVTAEHLIHKLTGVLQLLPERVPDAPRLEQAQAAALSSLLVRAFQVAASPEGGVHTAVQFIAEYGSDTPA*
Ga0137375_111072831	3300012360	Vadose Zone Soil	MDDKLDQPANTREFMAMWNTVTAEHLTHKLTDVLQELTRRLPNAVVLDDVQAGTLSPLLIRAFQVAASPEGGVHAAVQFLAQYSADTTA*
Ga0137360_106308962	3300012361	Vadose Zone Soil	MDEIRNPADTREFMAMWNSVTADHLSHKLAGVLQQLSGRLPDTPVLDEAQAGALSPPLVRAFQVAASPEGGVHAAIQFLAEYRVDTSA*
Ga0150984_1072713952	3300012469	Avena Fatua Rhizosphere	MDEELRNPQDTREFMAMWNTVTADHLTHKLAGVLPQLFQRVADGPPIAGTDAAALSPVLIRAFQVAASPEGGVYAAVQFLAEYGSGTAS*
Ga0137394_113831231	3300012922	Vadose Zone Soil	MDEQVDHPSNTREFMAMWNTVTADHLMHKLTAVLQDLPGRLPGAPRVDEAQAAALSALLVRAFQVAASPEGGVHAAVQFIAEYGADAPA*
Ga0137407_106034412	3300012930	Vadose Zone Soil	MDEQVDHPSNTREFMAMWNSVTAEHLAHKLTGVLQDLPERLPNAPRLDEAQAAALSALLVRAFQVAASPEGGVHTAVQFIAEFGADAPA*
Ga0164300_111605002	3300012951	Soil	MDELSNPANTREFMAMWNAVTAEHLTHKLTGVLQQLGERMPNAPAFGEGQAEAFSPLLIRAFQVAASPEGGVHAAVQFLA
Ga0164298_102150761	3300012955	Soil	LWVDPTCQEAPVDEPSSRPANTREFMAMWNAVTAEHLTVKLAAALQQLGQRVPNAPAIGEAQAEALSPLLIHALQVAAAPDGGVHAAVQFLAEYGAAPTG*
Ga0164298_104405781	3300012955	Soil	MDQPLDRPSNTREFMAMWNAVTAEHLTSKLTGTLQQLGQRVPNAPTFGAAEAEALAPLLIHAFQVAAAPDGGVHAAVQFLSEYGTTPAP*
Ga0164303_102905132	3300012957	Soil	MAMWNAVTAEHLTSKLTGTLQQLGQRVPNAPTFGAAEAEALAPLLIHAFQVAAAPDGGVHAAVQFLSEYGTTPAP*
Ga0164303_112744791	3300012957	Soil	MDEASSRPANTREFMAMWNAVTAEHLTVKLAAALQQLGQRVPNAPAIGEAQAEALSPLLIHALQVAAAPDGGVHAAVQFLAEYGAAPTG*
Ga0164299_116140242	3300012958	Soil	EFMAMWNAVTAEHLTHKLTGVLQQLGERMPNAPTFGDGQAEAFSPLLIRAFQVAASPEGGVHAAVQFLAEYGVEPTS*
Ga0164304_101157832	3300012986	Soil	MDEASSRPANTREFMAMWNAVTAEHLTVKLTAALQQLGQRVPTAPPIGEAQAEALSPLLIHAFQVAAAPDGGVHAAVQFLAEYGAAPAP*
Ga0164304_115849271	3300012986	Soil	MDEAPSKPADTQEFIAMWNAVTAEHLTHKLTATLQQLGDRIPNAPVLRAAEAEALSPLLIHAFQVAASRDGGVHAAVQFLAEYGAAPTP*
Ga0164307_107862811	3300012987	Soil	MDEAPSRPADTQEFIAMWNAVTAEHLTHKLTATLQQLGDRIPNAPVLRAAEAEALSPLLIHAFQVAASRDGGVHAAVQFLAEYGVEPTS*
Ga0164305_107263172	3300012989	Soil	MDELSNPANTREFMAMWNAVTAEHLTHKLTGVLQQLGERMTNAPTFGDGQAEALSPLLIRAFQVAASPEGGVHAAVQFLAEYGVEPTS*
Ga0163163_100941092	3300014325	Switchgrass Rhizosphere	MMDEPSSRPANTREFMAMWNAVTAEHLTVKLAAALRQLGQRVPNAPAIGETQAEALSPLLIHAFQVAAAPEGGVHAAVQFLAEYGAAPTG*
Ga0137403_100431701	3300015264	Vadose Zone Soil	MDEIRNPADTREFMAMWNSVTADHLSHKLAGVLQQLSGRLPDTPVLDEAQAGALSPLLVRAFQVAASPEGGVHAAIQFLAEYRVD
Ga0132258_118825233	3300015371	Arabidopsis Rhizosphere	MDELSNPANTREFMAMWNAVTAEHLTHKLTGVLQQLGERMPNAPTFGEGQAEAFSPLLIRAFQVAASPEGGVHAAVQFL
Ga0132258_129160402	3300015371	Arabidopsis Rhizosphere	MDEQLPKDTREFMAMWNSATADHLTHRLTGILHDLTSRASVRPPLSEAQAAALAPVLVRAFQVAASPEGGVHAAVQFLAEFGGDTG*
Ga0132256_1021104542	3300015372	Arabidopsis Rhizosphere	MDQPSGRPADTREFMAMWNAVTAERLPHKLTVALQQLGERVPHAPTFAPAEAEAMAPLLIHAFQVAAAKDGGVHAAVQFLSEYGAAPAP*
Ga0184608_102217712	3300018028	Groundwater Sediment	MDEQVDHPSNTREFMAMWNSVTAEHLIQKLTGVLQDLPGRVPDAPRLDQAQAAALSALLVRAFQVAAAPEGGVHTAVQFIAEYGSDAPA
Ga0184615_106364971	3300018059	Groundwater Sediment	MDEQVDHPSNTREFMAMWNSVTAEHLTHKLTGVLQDLPGRLPGAPRLDEAQAAALSALLVRAFQVAASPEGGVHTAVQFI
Ga0184618_101165633	3300018071	Groundwater Sediment	MDEQADHPSNTREFMAMWNSVTADHLMHKLTGVLQDLPGRVPDAPRLDQAQAAALSALIVRAFQVAASPEGGVHTAVQFIAEYGADAPA
Ga0190272_108771772	3300018429	Soil	MDEQVDHPSNTREFMAMWNSVTAEHLMHKLTGVLQDLPERVPDAPRLDQAQAAALSMLLVRAFQVAASPEGGVHTAVQFIAEYGAYAPALPAPAA
Ga0190270_133926941	3300018469	Soil	MDEQVDHPSNTREFMAMWNSVTAEHLTHKLTGVLQELPGRVPDAPRLDQAQAAAPEGGVHTAVQFLAEYGADAPA
Ga0190274_137199312	3300018476	Soil	MDEPVVHPSNTREFMAMWNSVTAEHLTHKLTGVLQELPGRVPDVPRLDQAQAAALSALLIRAFQVAASPEGGVHTAVQFIAEYGADAPA
Ga0173482_105207161	3300019361	Soil	MDEASSRPANTREFMAMWNAVTAEHLTVKLAAALQQLGERVPNAPPIGEAQAEALSPLLIHAFQVAAAPEGGVHAAVQFLAEYGAAPAP
Ga0190264_106690512	3300019377	Soil	MDEQVDHPSNTREFMAMWNSVTAEHLTHKLTGVLQELPGRVPDAPRLDQAQAAALSALLIRAFQVAASPEGGVHTAVQFIAEYGADAPA
Ga0193743_10877142	3300019889	Soil	MDEQVDHPSNTREFMAMWNSVTAEHLIHKLTGVLQELPARVPDAPPLDQAQAAALSALIVRAFQVAASPEGGVHTAVQFIAEYGADAPA
Ga0210381_101291472	3300021078	Groundwater Sediment	MDEQVDHPSNTREFMAMWNSVTAEHLTHKLTGVLQELPGRVPDAPRLDQAQAAALSAVLVRAFQVAASPEGGV
Ga0210382_100860462	3300021080	Groundwater Sediment	MDEQVDHPSNTREFMAMWNSVTAEHMIHKLTGVLQELPARVPDAPPLDQAQAAALSALIVRAFQVAASPEGGVHTAVQFIAEYGADAPA
Ga0210377_100913762	3300021090	Groundwater Sediment	MDEQVDHPSNTREFMAMWNSVTAEHLTHKLTGVLQDLPGRLPGAPRLDEAQAAALSALLVRAFQVAASPEGGVHTAVQFIAEYGADAPA
Ga0209640_111696611	3300025324	Soil	MDEELKNPANTREFMAMWNAVTTEHLTRQLTDVLQQLTRRLPDGPVLDNAQAGALSPLLIRAFQVAASPKGGVHAAVQFLAEITPGATA
Ga0209640_112642642	3300025324	Soil	MHDELKSPENTREFMAMWNSVTTDHLTHKLTDVLLQLGRRLPNLPALDEEQVGALSPLLIRALQIAASPDGGVHAAVQFLGEYAP
Ga0209342_101473172	3300025326	Soil	MDEELRNPANTHEFMALWNAVTAEHLTRELTDVLQQLTRRLPDGPVLDNAQAGALSPLLIRAFQVAASPKGGVHAAVQFLAEFTPGATA
Ga0210142_10018983	3300025552	Natural And Restored Wetlands	MDEQVDHPSNTREFIAMWNSVTAEHLTHKLTGVLQDLPGRLPAAPRLDEAQAAALSAVLVRAFQVAASPEGGVHTAVQFIAEYGADAPA
Ga0207688_108176341	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MDEQVDHPSNTREFMAMWNSVTAEHLIHKLTGVLQLLPERVPDAPRLEQAQAAALSSLLVRAFQVAASPEGGVHTAVQFIAEYGSDAPA
Ga0207685_104364001	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MDEAPSRPADTQEFIAMWNAVTAEHLTHKLTATLQQLGDRIPNAPVLRAAEAEALSPLLIHAFQVAASRDGGKAGTSAAETVRSVPG
Ga0207684_104520082	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MDEQVDHPSNTREFMAMWNSVTAEHLAHKLTGVLQDLPDRLPNAPRLDEAQAAALSALLVRAFQVAASPEGGVHTAVQFIAEYGADAPA
Ga0207707_110563342	3300025912	Corn Rhizosphere	MDEQVGNPSNTREFMAMWNSVTAEHLTHKLTGVLQDLPGRVPDAPRLDQAQAAALSALLVRAFQVAASPEGGVHTAVQFIAEYGADAPA
Ga0207646_101449594	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MDEQVDHPSNTREFMAMWNSVTAEHLAHKLTGVLQDLPERLPNAPRLDEAQAAALSALLVRAFQVAASPEGGVHTAVQFIAEYGADAPA
Ga0207665_111635252	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MDEIKNPADTREFMAMWNSVTADHLSHKLAGVLQQLSGRLPDTPMLDEAQAGALSPLLVRAFQVAASPEGGVHAAVQFLA
Ga0207641_111885771	3300026088	Switchgrass Rhizosphere	MMDEPSSRPANTREFMAMWNAVTAEHLTVKLAAALQQLGQRVPNAPAIGETQAEALSPLLIHAFQVAAAPEGGVHAAVQFLAEYGAAPTG
Ga0209797_1000029424	3300027831	Wetland Sediment	MDEELKHPANTRECVAMWSAVTGEHPAQELIGVLQQLTRRLPSGPVLDDAQARALSPLLIRPFQVAASPEGGVHAAVQFLAEYTPPGATA
Ga0209683_100667373	3300027840	Wetland Sediment	MDEELKHPANTRECVAMWSAVTGEHLAQELIGVLQQLTRRLPSGPVLDDAQARALSPLLIRPFQVAASPEGGVHAAVQFLAEYTPPGATA
Ga0209798_1000114110	3300027843	Wetland Sediment	MDEELKHPANTRECVAMWSAVTGEHLAQELIGVLQQLTRRLPSGPVLDDAQARALSPLLIRACQAAASPEGGVHAAVQFLAEYTPPGATA
Ga0209382_101696574	3300027909	Populus Rhizosphere	MDEQPSPKDTREFMAMWNSATADHLTHRLTGVLQDLSRKVAVPPLTEPQALGIAPVLVRAFQVAASPEGGVHAAIQFLAEYGGNTG
Ga0247828_102113112	3300028587	Soil	MDEVDHPSNTREFMAMWNSVTAEHLTHKLSGVLRQLPERRPDAPPLDEAQAAALAALMIRAFQVAASPEGGVHAAVQFLAEYGADAPA
Ga0307293_101664852	3300028711	Soil	MDEQVDHPSNTREFMAMWNSVTAEHLIQKLTGVLQDLPGRVPDAPRLDQAQAAALSALLVRAFQVAASPEGGV
Ga0307313_102364422	3300028715	Soil	MDEPVDHPSNTREFMAMWNSVTAEHLIHKLTDVLQVLPERVPDAPRLDQAQAAALSSLLVRAFQVAASPEGGVHTAVQFIAEYGSDA
Ga0307280_102841712	3300028768	Soil	MDEPVGNPSNTREFMAMWNSVTAEHLMHKLTGVLQDLPGRVPDAPRLDQAQAAALSALLVRAFQVAASPEGGVHTAVQFIAEYGADAPA
Ga0307320_100246194	3300028771	Soil	MDEQVDHPSNTREFMAMWNSVTAEHLTHKLTGVLQELPGRVPDAPRLDQAQAAALSALLVRAFQVAAAPEGGVHTAVQF
Ga0307282_102677441	3300028784	Soil	REFMAMWNSVTAEHMIHKLTGVLQELPARVPDAPPLDQAQAAALSALIVRAFQVAASPEGGVHTAVQFIAEYGADAPA
Ga0307296_108170462	3300028819	Soil	MDEQVDHPSNTREFMAMWNSVTAEHMIHKLTGVLQELPGRVPDAPRLDQAQAAALSALIVRAFQVAASPEGGVHTAVQFIAEYGADAPA
Ga0307277_100090554	3300028881	Soil	MDEPAGNPSNTREFMAMWNSVTAEHLMHKLTGVLQDLPERVPDAPRLDQAQAAALSALLVRAFQVAASPEGGVHTAVQFIAEYGADAPA
(restricted) Ga0255311_10373132	3300031150	Sandy Soil	MDTEPRPPADTREFMVMWNSVTTESLTHKLTAVLPGLAQALPGAPRLDEAQAAALSPVLVRAFQLAASPDGGVHAAVQFLGEYAAHPGT
Ga0307408_1002394072	3300031548	Rhizosphere	MDEQDHPSNTREFMAMWNSVTAEHLTHKLTGVLQQLPGRLPDAPPLDDAQAAALSALLIRAFQVAASPEGGVHAAVQFLAEYGADAPA
Ga0310813_112199681	3300031716	Soil	MDQPSGRPADTREFMAMWNAVTAEHLTHKLTTALQQLGERLPHAPTFAPAEAEAMAPLLIHAFQVAAAKDGGVHAAVQFLSEYGAAPAS
Ga0307413_101714353	3300031824	Rhizosphere	MHDELKSPENTREFMAMWNSVTTDHLTHKLTDVLLQLGRRLPNAPALDEEQVGALSPLLIRALQIAASPDGGVHAAVQFLGEYAPDSAP
Ga0310885_107316242	3300031943	Soil	ANTREFMAMWNAVTAEHLTVKLAAALQQLGQRVPNAPAIGETQAEALSPLLIHAFQVAAAPEGGVHAAVQFLAEYGAAPTG
Ga0326597_102020312	3300031965	Soil	MDEELKNPANTREFMAMWNAVTAEHLTRQLTDVLQQLTRRLPDGPVLDNAQAGALSPLLIRAFQVAASPKGGVHAAVQFLAEITPGATA
Ga0307416_1036321661	3300032002	Rhizosphere	MHDELKSPENTREFMAMWNSVTTDHLTHKLTDVLLQLGRRLPNAPALDEEQVGALSPLLIRALQIAASPDGGVHAAVQFLGE
Ga0307414_103096892	3300032004	Rhizosphere	MDEQDHPSNTREFMAMWNSVTAEHLTHKLTGVLQQLPGRLPDAPPLDDAQAAALSALLIRAFQVAASPEGGVHAPVQFLAEYGADAPA
Ga0307411_110549891	3300032005	Rhizosphere	MHDELKSPENTREFMAMWNSVTTDHLTHKLTDVLLQLGRRLPNAPALDEEQVGALSPLLIRALQIAA
Ga0308173_112496821	3300032074	Soil	EFMAMWNAVTAEHLIHKLAAALEELSKRVPDAPTFGTAGAEVMAPLLIHAFQVAAAKDGGVHAAVQFLVEYGAPPAAEP
Ga0310890_110870371	3300032075	Soil	PSNTREFMAMWNSVTAEHLTHKLSGVLRQLPERRPDAPPLDEAQAAALAALMIRAFQVAASPEGGVHAAVQFLAEYGADAPA
Ga0310810_104161192	3300033412	Soil	MDEASSRPANTREFMAMWNAVTAEHLTVKLTAALQQLGQRVPNAPAIGEAQAEALSPLLIHAFQVAAAPEGGVHAAVQFLAEYGAAPTP
Ga0316620_121940852	3300033480	Soil	MDTEPRRPADTREFMVMWNAVTTDALTHKLSAVLPELAQTLPGAPRLDEAQAAALSPVLVRALQLAASPDGGVHAAVQFLGEYAANPGT
Ga0247830_105055751	3300033551	Soil	MDEPLSHPATTREFMAMWNAVTAEHLSAKLAAALQQLGQRVPNAPTLVEAQAEALSPLLIHAFQVAAAPEGGVHAAVQFLAEYGAAPTP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters