Metagenome / Metatranscriptome Family F069413

Basic Information
Family ID	F069413
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	49 residues
Representative Sequence	MQSSLPAGWLAFTGRELNPLDRYKRFQITFSSPFSGFILAQRTASFPQY
Number of Associated Samples	123
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	11.48 %
% of genes near scaffold ends (potentially truncated)	97.58 %
% of genes from short scaffolds (< 2000 bps)	77.42 %
Associated GOLD sequencing projects	123
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Most Common Taxonomy
Group	Bacteria (57.258 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.742 % of family members)
Environment Ontology (ENVO)	Unclassified (36.290 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.032 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.39% β-sheet: 0.00% Coil/Unstructured: 89.61%
Feature Viewer

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Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00078	RVT_1	31.45
PF14319	Zn_Tnp_IS91	0.81
PF13701	DDE_Tnp_1_4	0.81
PF02417	Chromate_transp	0.81
PF08388	GIIM	0.81
PF05128	DUF697	0.81
PF13683	rve_3	0.81
PF13495	Phage_int_SAM_4	0.81
PF03734	YkuD	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.81
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	0.81
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.81
COG3768	Uncharacterized membrane protein YcjF, UPF0283 family	Function unknown [S]	0.81

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.26 %
Unclassified	root	N/A	42.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.26 %
Unclassified	root	N/A	42.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.26 %
Unclassified	root	N/A	42.74 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	57.26 %
Unclassified	root	N/A	42.74 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	57.26 %
Unclassified	root	N/A	42.74 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	53.23 %
Unclassified	root	N/A	42.74 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.74 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	37.90 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	2.42 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	35.48 %
Rhodovulum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum	1.61 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.74 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	13.71 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	1.61 %
unclassified Rhodovulum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum	1.61 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.81 %
Bradyrhizobium manausense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.74 %
Bradyrhizobium sp. 139	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	12.10 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	1.61 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.81 %
Bradyrhizobium sp. Ghvi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ghvi	0.81 %
Bradyrhizobium sp. 164	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 164	0.81 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.81 %
Bradyrhizobium manausense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000706\|JGI12374J11875_101321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	925	Open in IMG/M
3300000711\|JGI12585J11927_100548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	1456	Open in IMG/M
3300000716\|JGI12331J11884_104778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	543	Open in IMG/M
3300000886\|AL3A1W_1185487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	616	Open in IMG/M
3300001305\|C688J14111_10018435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2041	Open in IMG/M
3300001383\|JGI20194J14741_1003871	Not Available	2078	Open in IMG/M
3300001545\|JGI12630J15595_10101097	Not Available	567	Open in IMG/M
3300001661\|JGI12053J15887_10055415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2210	Open in IMG/M
3300001979\|JGI24740J21852_10026231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1954	Open in IMG/M
3300002070\|JGI24750J21931_1003074	Not Available	2003	Open in IMG/M
3300002908\|JGI25382J43887_10049003	Not Available	2295	Open in IMG/M
3300005332\|Ga0066388_101038979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	1378	Open in IMG/M
3300005353\|Ga0070669_100105501	Not Available	2132	Open in IMG/M
3300005539\|Ga0068853_100162304	Not Available	2017	Open in IMG/M
3300005547\|Ga0070693_100363638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	993	Open in IMG/M
3300005617\|Ga0068859_100188115	Not Available	2149	Open in IMG/M
3300005713\|Ga0066905_100073076	Not Available	2217	Open in IMG/M
3300005764\|Ga0066903_100781204	Not Available	1703	Open in IMG/M
3300005921\|Ga0070766_10757990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	659	Open in IMG/M
3300005993\|Ga0080027_10434586	Not Available	530	Open in IMG/M
3300006057\|Ga0075026_100631744	Not Available	632	Open in IMG/M
3300006059\|Ga0075017_100107467	Not Available	1949	Open in IMG/M
3300006102\|Ga0075015_100388330	Not Available	785	Open in IMG/M
3300006163\|Ga0070715_10043894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1887	Open in IMG/M
3300006176\|Ga0070765_100678144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	973	Open in IMG/M
3300006893\|Ga0073928_10076207	Not Available	2889	Open in IMG/M
3300009637\|Ga0116118_1120725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	866	Open in IMG/M
3300009640\|Ga0116126_1032338	Not Available	2186	Open in IMG/M
3300010403\|Ga0134123_10124947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	2090	Open in IMG/M
3300010856\|Ga0126358_1219138	Not Available	625	Open in IMG/M
3300010859\|Ga0126352_1209748	Not Available	539	Open in IMG/M
3300012019\|Ga0120139_1010727	Not Available	2112	Open in IMG/M
3300012177\|Ga0153943_1084992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	668	Open in IMG/M
3300012199\|Ga0137383_11148619	Not Available	560	Open in IMG/M
3300013758\|Ga0120147_1009056	Not Available	2137	Open in IMG/M
3300014159\|Ga0181530_10167352	Not Available	1237	Open in IMG/M
3300014838\|Ga0182030_10254422	Not Available	2002	Open in IMG/M
3300016387\|Ga0182040_11307620	Not Available	612	Open in IMG/M
3300017925\|Ga0187856_1167168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	818	Open in IMG/M
3300017943\|Ga0187819_10462431	Not Available	725	Open in IMG/M
3300017955\|Ga0187817_10577203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	717	Open in IMG/M
3300018008\|Ga0187888_1182615	Not Available	842	Open in IMG/M
3300018042\|Ga0187871_10693507	Not Available	566	Open in IMG/M
3300018057\|Ga0187858_10557236	Not Available	695	Open in IMG/M
3300019185\|Ga0184587_110065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	835	Open in IMG/M
3300019263\|Ga0184647_1145315	Not Available	604	Open in IMG/M
3300020018\|Ga0193721_1076013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	872	Open in IMG/M
3300020064\|Ga0180107_1212108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	568	Open in IMG/M
3300020579\|Ga0210407_10473108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	979	Open in IMG/M
3300020581\|Ga0210399_10363175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	1208	Open in IMG/M
3300020582\|Ga0210395_11081089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	592	Open in IMG/M
3300021178\|Ga0210408_10113796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2130	Open in IMG/M
3300021420\|Ga0210394_11130680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	674	Open in IMG/M
3300021476\|Ga0187846_10041607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2051	Open in IMG/M
3300021478\|Ga0210402_10114704	Not Available	2430	Open in IMG/M
3300021560\|Ga0126371_11949945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	706	Open in IMG/M
3300022513\|Ga0242667_1012722	Not Available	793	Open in IMG/M
3300022531\|Ga0242660_1131932	Not Available	640	Open in IMG/M
3300022717\|Ga0242661_1053834	Not Available	757	Open in IMG/M
3300022718\|Ga0242675_1082229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	593	Open in IMG/M
3300023551\|Ga0247546_103846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	593	Open in IMG/M
3300023660\|Ga0247550_100879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	863	Open in IMG/M
3300024271\|Ga0224564_1005498	Not Available	1985	Open in IMG/M
3300025482\|Ga0208715_1058567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	695	Open in IMG/M
3300025579\|Ga0207927_1011323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2997	Open in IMG/M
3300025725\|Ga0209638_1064738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	1421	Open in IMG/M
3300025898\|Ga0207692_10050107	Not Available	2110	Open in IMG/M
3300025899\|Ga0207642_10356630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	864	Open in IMG/M
3300025911\|Ga0207654_10634789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	764	Open in IMG/M
3300025914\|Ga0207671_10233904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	1442	Open in IMG/M
3300025916\|Ga0207663_11211073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	608	Open in IMG/M
3300025937\|Ga0207669_10709159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	827	Open in IMG/M
3300025949\|Ga0207667_10465952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1283	Open in IMG/M
3300026223\|Ga0209840_1120173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	561	Open in IMG/M
3300026296\|Ga0209235_1062475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	1734	Open in IMG/M
3300026297\|Ga0209237_1058333	Not Available	1890	Open in IMG/M
3300026374\|Ga0257146_1001021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4737	Open in IMG/M
3300026482\|Ga0257172_1076628	Not Available	614	Open in IMG/M
3300026839\|Ga0207764_122425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	559	Open in IMG/M
3300026845\|Ga0207760_101586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	2025	Open in IMG/M
3300026847\|Ga0207802_1016188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	650	Open in IMG/M
3300026858\|Ga0207729_100945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	1653	Open in IMG/M
3300026859\|Ga0207859_1015483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	666	Open in IMG/M
3300026866\|Ga0207786_106654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1016	Open in IMG/M
3300026979\|Ga0207817_1020227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	719	Open in IMG/M
3300027011\|Ga0207740_1026428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	731	Open in IMG/M
3300027045\|Ga0207726_1037202	Not Available	677	Open in IMG/M
3300027070\|Ga0208365_1006878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	1378	Open in IMG/M
3300027330\|Ga0207777_1050746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	735	Open in IMG/M
3300027516\|Ga0207761_1059335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	743	Open in IMG/M
3300027605\|Ga0209329_1054848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	853	Open in IMG/M
3300027641\|Ga0208827_1034529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1785	Open in IMG/M
3300027648\|Ga0209420_1031636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1649	Open in IMG/M
3300027660\|Ga0209736_1004208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4764	Open in IMG/M
3300027681\|Ga0208991_1032721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	1575	Open in IMG/M
3300027698\|Ga0209446_1156331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	589	Open in IMG/M
3300027795\|Ga0209139_10336750	Not Available	528	Open in IMG/M
3300027829\|Ga0209773_10348566	Not Available	617	Open in IMG/M
3300028015\|Ga0265353_1022909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	610	Open in IMG/M
3300029999\|Ga0311339_10229419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2064	Open in IMG/M
3300030545\|Ga0210271_10997080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 164	506	Open in IMG/M
3300030622\|Ga0265391_10352779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	505	Open in IMG/M
3300030762\|Ga0265775_103807	Not Available	827	Open in IMG/M
3300031096\|Ga0308193_1058804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ghvi	592	Open in IMG/M
3300031226\|Ga0307497_10321276	Not Available	716	Open in IMG/M
3300031573\|Ga0310915_10423709	Not Available	945	Open in IMG/M
3300031590\|Ga0307483_1042782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	502	Open in IMG/M
3300031640\|Ga0318555_10513610	Not Available	649	Open in IMG/M
3300031763\|Ga0318537_10353481	Not Available	542	Open in IMG/M
3300031768\|Ga0318509_10052984	Not Available	2074	Open in IMG/M
3300031820\|Ga0307473_10229115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	1124	Open in IMG/M
3300031897\|Ga0318520_10665112	Not Available	650	Open in IMG/M
3300031942\|Ga0310916_11052242	Not Available	677	Open in IMG/M
3300031943\|Ga0310885_10221240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	946	Open in IMG/M
3300032052\|Ga0318506_10196144	Not Available	890	Open in IMG/M
3300032180\|Ga0307471_104271592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	504	Open in IMG/M
3300032205\|Ga0307472_101669644	Not Available	628	Open in IMG/M
3300032205\|Ga0307472_102503442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	525	Open in IMG/M
3300032261\|Ga0306920_103028504	Not Available	633	Open in IMG/M
3300033289\|Ga0310914_11311203	Not Available	626	Open in IMG/M
3300033500\|Ga0326730_1054528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	765	Open in IMG/M
3300033502\|Ga0326731_1009913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2401	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.32%
Host-Associated	Host-Associated	9.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.00%
Aquatic	Environmental → Aquatic	15.32%
Plants	Host-Associated → Plants	8.87%
Fungi	Host-Associated → Fungi	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.77%
Freshwater	Environmental → Aquatic → Freshwater	11.29%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.03%
Sediment	Environmental → Aquatic → Sediment	3.23%
Peat	Environmental → Terrestrial → Peat	2.42%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.81%
Cave	Environmental → Terrestrial → Cave	0.81%
Mycelium	Host-Associated → Fungi → Mycelium	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.35%
Loam	Environmental → Terrestrial → Soil → Loam	25.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.68%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.23%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.42%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.42%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.61%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.81%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.81%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	20.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.10%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.45%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	5.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.23%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.42%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.42%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.61%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.61%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.03%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.23%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.23%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	3.23%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.23%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.42%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.42%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.61%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.61%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.61%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.61%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.81%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.81%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.81%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.81%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.81%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.81%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000706	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 65	Environmental	Open in IMG/M
3300000711	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 26	Environmental	Open in IMG/M
3300000716	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 66	Environmental	Open in IMG/M
3300000886	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-65cm-3A)- 1 week illumina	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001383	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001979	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6	Host-Associated	Open in IMG/M
3300002070	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4	Host-Associated	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010856	Boreal forest soil eukaryotic communities from Alaska, USA - W4-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010859	Boreal forest soil eukaryotic communities from Alaska, USA - C5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012177	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ027 MetaG	Host-Associated	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300013758	Permafrost microbial communities from Nunavut, Canada - A24_65cm_12M	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300019185	Soil microbial communities from Bohemian Forest, Czech Republic ? CSE2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019263	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020064	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT27_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022513	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023551	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSA4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023660	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025482	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026223	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190 (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026839	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 52 (SPAdes)	Environmental	Open in IMG/M
3300026845	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 24 (SPAdes)	Environmental	Open in IMG/M
3300026847	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 20 (SPAdes)	Environmental	Open in IMG/M
3300026858	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 69 (SPAdes)	Environmental	Open in IMG/M
3300026859	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 25 (SPAdes)	Environmental	Open in IMG/M
3300026866	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 76 (SPAdes)	Environmental	Open in IMG/M
3300026979	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 13 (SPAdes)	Environmental	Open in IMG/M
3300027011	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 29 (SPAdes)	Environmental	Open in IMG/M
3300027045	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 40 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300028015	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE6	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030545	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO142-VCO033SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030622	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE044SO (Eukaryote Community Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300030762	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031096	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031590	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033500	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF7AN SIP fraction	Environmental	Open in IMG/M
3300033502	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF9FY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12374J11875_1013211	3300000706	Tropical Forest Soil	MQSSLPAGWLAFTGRESNPLDHYKRFQITLSSPSSGFILAQRTAGFPQYGWKAGLSDGAFPSPDQL
JGI12585J11927_1005481	3300000711	Tropical Forest Soil	MQSSLPAGWLAFTGRESNPLDHYKRFQITLSSPSSGFILAQRTAGFS
JGI12331J11884_1047781	3300000716	Tropical Forest Soil	MQSSLPAGWLAFTGRESNPLDHYKRFQITLSSPSSGFILAQRTAGFPQYGW
AL3A1W_11854871	3300000886	Permafrost	MQGSLPAGWLAFTGRELNPLDRYERFQITFSSPSPEFFLAQRTAGFPQYGWKAGVSG
C688J14111_100184353	3300001305	Soil	MQGSLPAGWLAFAGREFNPLDHDKRFQFVSSSSSGFILAQGKF
JGI20194J14741_10038711	3300001383	Arctic Peat Soil	MQSSLPAGWLASTGRELNPLDRYKRFQITFSSPFSGFILAQRTAGFPQYGWKAGF
JGI12630J15595_101010971	3300001545	Forest Soil	MQGSLPAGWLAFTGRELNPLDRDEGFQITSSSLPGLFLAQRPKTCTGTG
JGI12053J15887_100554151	3300001661	Forest Soil	MQGSLPAGWLAFTGRGLNPLDRNEGFQITSSSSLPGLFLAQRPKTCTRADIDTEE
JGI24740J21852_100262311	3300001979	Corn Rhizosphere	MQSSLPAGWLASTGRELNPLDRYKRFQITFSSPFSGFILAQRTAGFP
JGI24750J21931_10030741	3300002070	Corn, Switchgrass And Miscanthus Rhizosphere	MQSSLPAGWLASTGRELNPLDRYKRFQITFSSPFSGFILAQRTAGFPXYGWKAGFSG
JGI25382J43887_100490032	3300002908	Grasslands Soil	MQSSLPAGWLAFPGRESNPLDHYKRFQITLSSPSSGFILAQRTAGFPQYGWK
Ga0066388_1010389791	3300005332	Tropical Forest Soil	MQSLLPAGWLASTGRELNPLDRYKRFQITFLFPFSGFILAQRTAGFPQYGWKVG
Ga0070669_1001055011	3300005353	Switchgrass Rhizosphere	MQSSLPAGWLASTGRELNPLDRYKRFQITFSSPFSGFILAQRTAGFPQYGWKAG
Ga0068853_1001623041	3300005539	Corn Rhizosphere	MQSSLPAGWLASTGRELNPLDRYKRFQITFSSPFSGFILAQRTAGFPQYGWKAGLSGGTF
Ga0070693_1003636381	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MQSSLPAGWLASTGRELNPLDRYKRFQITFSSPFSGFILAQRTAGFPQYGWKAGFSGGVFPH
Ga0068859_1001881153	3300005617	Switchgrass Rhizosphere	MQSSLPAGWLASTGRELNPLDRYKRFQITFSSPFSGFILAQRTAGFPQYGWKAGLSG
Ga0066905_1000730762	3300005713	Tropical Forest Soil	MQSLLPAGWLASTGRELNPLDRYKRFQITFLFPFSGFILAQRTAGFPQYGWKVGFPSGA
Ga0066903_1007812041	3300005764	Tropical Forest Soil	MQSLLPAGWLASTGRELNPLDRYKRFQITFLFPFSGFILAQRTAGFPQYGWKVSGAFLDRGQL
Ga0070766_107579901	3300005921	Soil	MQDSLPAGWLAFTGRELNPLDRDEGFQITSSSSLPGLFLAQ
Ga0080027_104345862	3300005993	Prmafrost Soil	GSLPAGWLAFTGRELNPLDRDEGFQITSSSSLPGLFLAQHPKTFTN*
Ga0075026_1006317441	3300006057	Watersheds	MLPPPLQGSLPAGWLAFTARELNPLDRDEGFQITSSSSLPGLFLAQ
Ga0075017_1001074674	3300006059	Watersheds	MQSSLPAGWLAFTGRELNPLDRYKRFQITFSFPFSGFILAQEG
Ga0075015_1003883301	3300006102	Watersheds	MQSSLPAGWLAFTGRESNPLDHYKRFQITFSSPSSGLILAQRTASFPQYGWKAGCPSGAFLGDR
Ga0070715_100438945	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MQSSLPAGWLAFTGRVSNPLDREERFQISFSSSFPGLFLTQ
Ga0075014_1009461432	3300006174	Watersheds	WLAFTGRELNPLDRDEGFQITSSSLPGLFLAQRP*
Ga0070765_1006781443	3300006176	Soil	MQSSLPAGWLAFTGRVSNPLDREERFQISFSSSFP
Ga0073928_100762071	3300006893	Iron-Sulfur Acid Spring	MQGSLPAGWLAFTGRELNPLDRDKGFQITSSSLPGLFLAQRP
Ga0111538_141281621	3300009156	Populus Rhizosphere	LPAGWLAFTGRELNPLDRVERFQSCYISSPFPGFILTLRKPTFQGDET*
Ga0116118_11207252	3300009637	Peatland	MQSSLPAGWLAFTGRELNPLDRYKRFQITFSFPFSGFILALE
Ga0116126_10323383	3300009640	Peatland	MQGSLPAGWLAFAGRELNPLDHDKRFQITFSFPSSGFILAQRPKAFNER
Ga0134123_101249473	3300010403	Terrestrial Soil	AGWLASTGRELNPLDRYKRFQITFSSPFSGFILAQRTGGFGE*
Ga0126358_12191381	3300010856	Boreal Forest Soil	MQSSLPADWLAFTGRELNPLDRYKRFQITVSSSFSGFIL
Ga0126352_12097481	3300010859	Boreal Forest Soil	MQSSLPAGWLAFTGRELNPLDRYKRFQITFSSPFSGFIL
Ga0120139_10107271	3300012019	Permafrost	MVLPPSMQGSLPAGWLAFTGRELNPLDRYERFQITFSSPSPEFFLAQRTAGFPQYGWKAGVSGET
Ga0153943_10849921	3300012177	Attine Ant Fungus Gardens	MQDSLPAGWLAFTGRELNPLDRDEGFQITSSSSLPGLFLAQRLKTLYGAPRCQLRKRH
Ga0137383_111486191	3300012199	Vadose Zone Soil	MQGSLPVGWLAFTGRELNPLDRYKRFQFTSPSPFSGLVLAQEESFL
Ga0120147_10090562	3300013758	Permafrost	MQGSLPAGWLAFTGRELNPLDRYERFQITFSFPSPEFFLAQRTAGFPQYGWKAGVSGET
Ga0181530_101673521	3300014159	Bog	GWLAFAGRELNPLDHVERFQIIFSSPSPGFFLAQRTAGFPRYGWKAGM*
Ga0182030_102544221	3300014838	Bog	MVLPPALQGSLPAGWLAFTGRELNPLDRDEGFQITSSSSLPGL
Ga0182040_113076201	3300016387	Soil	MQSSLPAGWLAFTGRELNPLDRNKRFQITFSSPFSGFILAQRTASFPQYG
Ga0187856_11671681	3300017925	Peatland	MQSSLPAGWLAFTGRELNPLDRYKRFQITFSFPFSGFILAL
Ga0187819_104624311	3300017943	Freshwater Sediment	MQGLLPAGWLAFAGRELNPLDHVERFQIIFSSPSPGFFLAQRTAGFPQYGWKAGI
Ga0187817_105772031	3300017955	Freshwater Sediment	MQGSLPAGWLAFTGRELNPLDRDEGFQITSSSLPGLFLAQR
Ga0187888_11826152	3300018008	Peatland	GWLAFAGRELNPLDHDKRFQITFSFPSSGFILAQRPKTCT
Ga0187871_106935071	3300018042	Peatland	MQGSLPDGWLAFTGRELNPLDRDEGFQITSSSFLPG
Ga0187858_105572361	3300018057	Peatland	MQGLLPAGWLAFTGRELNPLDRDEGFQITSSSSLPGLFLAQHPKP
Ga0184587_1100651	3300019185	Soil	MQGSLPAGWLAFTGRELNPLDRDEGFPITSSSLPGLFLAQRPKTCTEPEIAAHFRGTRI
Ga0184647_11453151	3300019263	Groundwater Sediment	MQGSLPADWLAFAGRELNPLDRDEGFQITSSSSLPGLFLAQRPKT
Ga0193721_10760131	3300020018	Soil	MQSSLPAGWLAFTGRELNPLDRYKRFQITVSSSFSGFILAQG
Ga0180107_12121081	3300020064	Groundwater Sediment	MQSSLPAGWLAFTGRESNPLDHYKRFQITLSSPSSGFILAQRTAGFPQYGWK
Ga0210407_104731081	3300020579	Soil	MQDSLPAGWLASTGRELNPLDRDEGFQITSSSSLPGLFLAQRLKTCTKPAPLSSAQMSSF
Ga0210399_103631751	3300020581	Soil	MQDSLPAGWLAFTGRELNPLDRDEGFQITSSSSLPGLFLAQRLKTCA
Ga0210395_110810891	3300020582	Soil	MQGSLPAGWLAFTGRELNPLDRDEGFQITSSSLPGLFLAQRPK
Ga0210408_101137963	3300021178	Soil	MQDSLPAGWLAFTGRELNPLDRDEGFQITSSSSLPGLFLAQRLKTCT
Ga0210394_111306801	3300021420	Soil	MQDSLPAGWLAFTGRELNPLDRDEGFQITSSSSLPGLFLAQRPRNLHK
Ga0187846_100416071	3300021476	Biofilm	MQDSLPAGWLAFAGRELNPLDRDEGFQIKSSSSLPGLFLAQRPKTCTIPEVL
Ga0210402_101147042	3300021478	Soil	MQDSLPAGWLAFTGRELNPLDRDEGFQITSSSSLPGLFLAQRLKTCPQ
Ga0126371_119499451	3300021560	Tropical Forest Soil	LFIPGVASPAGWLAFTGRELNPLDRYQRFQITFPSSFSGFVLAQGKF
Ga0242667_10127221	3300022513	Soil	MQSSLPAGWLAFTGRESNPLDHYKRFQITFSSPSSGLILAQRTASFPQYGWKAAVQA
Ga0242660_11319321	3300022531	Soil	MQSSLPAGWLASTGRELNPLDRYKRFQITFSSPFSGFILAQRTAGLLARNQAGIR
Ga0242661_10538341	3300022717	Soil	MQSSLPAGWLAFTGRESNPLDHYKRFQITFSSPSSGLILAQRTASFPQYGWKAG
Ga0242675_10822291	3300022718	Soil	MQGSLPAGWLAFTGRELNPLDRDEGFQITSSSLPGLFLAQ
Ga0247546_1038461	3300023551	Soil	MQGSLPAGWLAFTGRELNPLDRDEGFQITSSSLPGLFLAQRP
Ga0247550_1008791	3300023660	Soil	MQGSLPAGWLAFTGRELNPLDRDEGFQITSSSFLPGLFLAQHPQTFTKTDIATL
Ga0224564_10054981	3300024271	Soil	MQGSLPAGWLAFTGRELNPLDRDEGFQITSSSLPGLFLAQRPKTLYGAFF
Ga0208715_10585671	3300025482	Arctic Peat Soil	MQGSLPAGWLAFTGRELNPLDRDEGFQITSSSSLPGLFLAQ
Ga0207927_10113235	3300025579	Arctic Peat Soil	MQSSLPAGWLASTGRELNPLDRYKRFQITFSSPFSGFILAQRTAGFPQYGWKTG
Ga0209638_10647382	3300025725	Arctic Peat Soil	MQSSLPAGWLAFTGRELNPLDRYERFQITFSFPFPEFFLAQRTAGFPQYGWKAGVSDETFPARHSA
Ga0207692_100501071	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MQSSLPAGWLASTGRELNPLDRYKRFQITFSSPFSGFILAQRTAGFPQYGWKVGFPSGAFLDRR
Ga0207642_103566301	3300025899	Miscanthus Rhizosphere	MQSSLPAGWLASTGRELNPLDRYKRFQITFSSPFSGFILAQRTAGFPQYGCV
Ga0207654_106347892	3300025911	Corn Rhizosphere	MQDSLPAGWLAFTGRASNPLDRYKRFQIKVSSSFSGLSLEQGKFHG
Ga0207671_102339041	3300025914	Corn Rhizosphere	MQSSLPAGWLASTGRELNPLDRYKRFQITFSSPFSGFILAQRTAGFPQ
Ga0207663_112110731	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MQGSLPAGWLAFTGRELNPLDRDEGFQITSSSLPGLFLANVRKTCTTGD
Ga0207669_107091591	3300025937	Miscanthus Rhizosphere	MQSSLPAGWLASTGRELNPLDRYKRFQITFSSPFSGFILAQRTAGFPQYGWKAGFPSG
Ga0207667_104659522	3300025949	Corn Rhizosphere	MQSSLPAGWLASTGRELNPLDRYERFQITFSSPFSGFILAQRTAGFPQYGWKAGFSGGVFPKP
Ga0209840_11201731	3300026223	Soil	MQSSLPAGWLAFTGRELNPLDRYERFQITFSFPFPEF
Ga0209235_10624752	3300026296	Grasslands Soil	MQSSLPAGWLAFPGRESNPLDHYKRFQITLSSPSSGFILAQRTAGFPQYGWKAGFPSGAF
Ga0209237_10583331	3300026297	Grasslands Soil	MQSSLPAGWLAFPGRESNPLDHYKRFQITLSSPSSGFILAQRTAGFPQYGWKAGF
Ga0257146_10010211	3300026374	Soil	MVLPPSMQGSLPAGWLAFTGRELNPLDRNEGFQITSSSSLPGLFLAQHPKTYTTAEVISL
Ga0257172_10766281	3300026482	Soil	GWLPAGWLAFTRRESNPLDHYERFQIIRSSSSPVLLTLPR
Ga0207764_1224251	3300026839	Tropical Forest Soil	MQDSLPAGWLASTGRELNPLDRDEGFQIKSSSSLP
Ga0207760_1015861	3300026845	Tropical Forest Soil	MQSSLPAGWLAFTGRESNPLDRYKRFQITFSFPSSGFI
Ga0207802_10161881	3300026847	Tropical Forest Soil	MQSSLPAGWLAFTGRESNPLDHYKRFQITLSSPSSGFILAQRTAG
Ga0207729_1009452	3300026858	Tropical Forest Soil	MQSSLPAGWLAFTGRESNPLDHYKRFQITLSSPSSGFILAQRTAGFPQYGWKAG
Ga0207859_10154831	3300026859	Tropical Forest Soil	MQSSLPAGWLAFTGRESNPLDHYKRFQITLSSPSSGFILAQ
Ga0207786_1066541	3300026866	Tropical Forest Soil	MQSSLPAGWLAFTGRESNPLDHYKRFQITLSSPSSGFILAQRTAGFPQYGWKAGLS
Ga0207817_10202271	3300026979	Tropical Forest Soil	MVLPPSMQDSLPAGWLASTGRELNPLDRDEGFQIKSSSSLPGLFLAQRPKTCTKPAIRALLEP
Ga0207740_10264282	3300027011	Tropical Forest Soil	MQDSLPAGWLASTGRELNPLDRDEGFQIKSSSSLPGLFLAQRPKT
Ga0207726_10372021	3300027045	Tropical Forest Soil	MQSSLPAGWLAFTGRESNPLDRYKRFQITFSFPSSGFILAQRTASFPQY
Ga0208365_10068782	3300027070	Forest Soil	MQDSLPAGWLAFTGRELNPLDRDEGFQITSSSSLPGLFLAQRLKTIVAIKCAACQW
Ga0207777_10507461	3300027330	Tropical Forest Soil	MQDSLPAGWLASTGRELNPLDRDEGFQIKSSSSLPGLFLAQHPKTCTTRDF
Ga0207761_10593351	3300027516	Tropical Forest Soil	MQSSLPAGWLAFTGRESNPLDRYKRFQITFSFPSSGFILA
Ga0209329_10548481	3300027605	Forest Soil	MQSSLPAGWLAFTGRELNPLDRDEGFQITSSSLPGLFLAQRPFTFNIQAASNSSQAA
Ga0208827_10345291	3300027641	Peatlands Soil	MQGSLPAGWLAFTGRELNPLDRDEGFQITSSSLPGLFLAQRPKTYTQ
Ga0209420_10316361	3300027648	Forest Soil	MVLPPSMQGSLPAGWLAFTGRELNPLDRDEGFQITSSSSLPGL
Ga0209736_10042081	3300027660	Forest Soil	MQGSLPAGWLAFTGRELNPLDRDEGFQITSSSSLPGLFLAQRLKT
Ga0208991_10327212	3300027681	Forest Soil	MQSSLPAGWLAFAGRGLNPLDRYERFQITFSSPSPGFILAQRLRTFMWFVTA
Ga0209446_11563311	3300027698	Bog Forest Soil	MQGSLPAGWLAFTGRELNPLDRDEGFQITSSSLPGLFLAQRPRNLHNGRLLYRS
Ga0209139_103367501	3300027795	Bog Forest Soil	MQSSFPAGWLAFTGRELNPLDRYKRFQITFSFPFSGFILAQRKFHDVASLNA
Ga0209773_103485661	3300027829	Bog Forest Soil	MQSSFPAGWLAFTGRELNPLDRYKRFQITFSFPFSGFILAQGK
Ga0265353_10229091	3300028015	Soil	MQGSLPAGWLAFTGRELNPLDRDEGFQITSSSLPGLFLAQRPKAFNE
Ga0311339_102294191	3300029999	Palsa	MLPPPLQSSLPAGWLASTGRELNPLDHFKRFQITLSSPFSGFILAQEKFHYLP
Ga0210271_109970801	3300030545	Soil	MQGSLPAGWLAFTGRELNPLDRDEGFQITSSSLPGLF
Ga0265391_103527791	3300030622	Soil	MQGSLPAGWLAFTGRELNPLDRDEGFQITSSSLPGLFLAQRPKTCTTTDSC
Ga0265775_1038071	3300030762	Soil	MVLPPSMQSSLPAGWLAFTGRELNPLDRYKRFQITFSSPFSGFVLAQGKFH
Ga0308193_10588041	3300031096	Soil	MQSSLPAGWLAFTGRELNPLDRYKRFQITVSSSFSGFILAQGKFHDCAF
Ga0307497_103212761	3300031226	Soil	MQGSLPAGWLAFTGRELNPLDRNEGFQITSSSSLPGLFLAQHLKTCTK
Ga0310915_104237092	3300031573	Soil	MQSSLPAGGLAFTGRELNPLDRYKRFQITFSSPFSGFILAQRTASFPQYG
Ga0307483_10427821	3300031590	Hardwood Forest Soil	MQGSLPAGWLAFTGRELNPLDCYKRFQITFPSSFSGFVLAQEKF
Ga0318555_105136101	3300031640	Soil	MQSSLPAGGLAFTGRELNPLDRYKRFQITFSSPFSGFILAQRKASFPRY
Ga0318537_103534811	3300031763	Soil	MQSSLPAGGLAFTGRELNPLDRYKRFQITFSSPFSGFILAQRTVSFP
Ga0318509_100529843	3300031768	Soil	MQSSLPAGGLAFTGRELNPLDRYKRFQITFSSPFSGFILAQRTVSFPQYGW
Ga0307473_102291151	3300031820	Hardwood Forest Soil	MQGSLPAGWLAFAGREFNPLDHDKRFQFVSSSSSGFILAQ
Ga0318520_106651121	3300031897	Soil	MQSSLPAGGLAFTGRELNPLDRYKRFQITFSSPFSGFILAQRTVSFPQY
Ga0310916_110522421	3300031942	Soil	MQSSLPAGGLAFTGRELNPLDRYKRFQITFSSPFSGFILAQ
Ga0310885_102212402	3300031943	Soil	MQSSLPAGWLASTGRELNPLDRYKRFQITFSSPFSGFILAQRTAGFPQYGWK
Ga0318506_101961441	3300032052	Soil	MQSSLPAGGLAFTGRELNPLDRYKRFQITFSSPFSGFILAQRTVSFPQYGWKAGFPN
Ga0307471_1042715921	3300032180	Hardwood Forest Soil	MQGSLPAGWLAFTGRELNPLDRDEGFQITSSSLPGLLLAHVV
Ga0307472_1016696442	3300032205	Hardwood Forest Soil	MQGLLPAGWLAFAGRELNPLDHVERFQIIFSSPSPGFFLAQRTVSFPQYGCKAGFPS
Ga0307472_1025034421	3300032205	Hardwood Forest Soil	MQGSLPAGWLAFTGRELNPLDRDEGFQITSSSSLPGLFLAQRLK
Ga0306920_1030285041	3300032261	Soil	MQSSLPAGGLAFTGRELNPLDRYKRFQITFSSPFSGFILAQRT
Ga0310914_113112032	3300033289	Soil	MQSSLPAGWLAFTGRELNPLDRYKRFQITFSSPFSGFILAQRTASFPQY
Ga0326730_10545281	3300033500	Peat Soil	MQSSLPAGWLAFTGRESNPLDHYKRFQITLSSPSSGFILAQRTAGFPQYGWKAGLSGGAFPGVSQLK
Ga0326731_10099133	3300033502	Peat Soil	MQSSLPAGWLAFTGRESNPLDHYKRFQITLSSPSSGFILAQRTAGFPQYGWKAGLSDGA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069413

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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