NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F069412

Metagenome / Metatranscriptome Family F069412

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F069412
Family Type Metagenome / Metatranscriptome
Number of Sequences 124
Average Sequence Length 83 residues
Representative Sequence METIIGFIAGYLTGVSQGREGMQRARTSLEAIRTSPEVRRMVADGVGLAQLVLGRVAKGGLSGAIGGVSDLITGSAPAGDERRAA
Number of Associated Samples 96
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 84.68 %
% of genes near scaffold ends (potentially truncated) 27.42 %
% of genes from short scaffolds (< 2000 bps) 78.23 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (67.742 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(12.903 % of family members)
Environment Ontology (ENVO) Unclassified
(33.065 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(58.871 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 56.64%    β-sheet: 0.00%    Coil/Unstructured: 43.36%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.26
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF14224DUF4331 5.65
PF06912DUF1275 4.03
PF13515FUSC_2 3.23
PF12805FUSC-like 2.42
PF00374NiFeSe_Hases 1.61
PF02782FGGY_C 0.81
PF02366PMT 0.81
PF03745DUF309 0.81
PF00005ABC_tran 0.81
PF01791DeoC 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG3619Uncharacterized membrane protein YoaK, UPF0700 familyFunction unknown [S] 4.03
COG0374Ni,Fe-hydrogenase I large subunitEnergy production and conversion [C] 1.61
COG3259Coenzyme F420-reducing hydrogenase, alpha subunitEnergy production and conversion [C] 1.61
COG1547Predicted metal-dependent hydrolaseFunction unknown [S] 0.81


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms67.74 %
UnclassifiedrootN/A32.26 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2189573001|GZR05M102GXD45Not Available519Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_100350871Not Available504Open in IMG/M
3300001384|JGI20190J14840_1006293All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1244Open in IMG/M
3300001384|JGI20190J14840_1018717Not Available589Open in IMG/M
3300001384|JGI20190J14840_1023721Not Available510Open in IMG/M
3300001452|JGI20203J14952_1012168All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia955Open in IMG/M
3300002245|JGIcombinedJ26739_100297140All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1499Open in IMG/M
3300004091|Ga0062387_100878214Not Available676Open in IMG/M
3300004479|Ga0062595_100178292All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1282Open in IMG/M
3300005337|Ga0070682_100101965All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1896Open in IMG/M
3300005435|Ga0070714_100423943All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1261Open in IMG/M
3300005435|Ga0070714_100512966All Organisms → cellular organisms → Bacteria1144Open in IMG/M
3300005436|Ga0070713_100519078All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ungokensis1125Open in IMG/M
3300005436|Ga0070713_102214426Not Available532Open in IMG/M
3300005437|Ga0070710_10039595All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales2594Open in IMG/M
3300005437|Ga0070710_10587958All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia773Open in IMG/M
3300005456|Ga0070678_102149011Not Available529Open in IMG/M
3300005458|Ga0070681_10883179All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia812Open in IMG/M
3300005564|Ga0070664_101756421All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium588Open in IMG/M
3300005602|Ga0070762_10412648Not Available872Open in IMG/M
3300005602|Ga0070762_10815548Not Available632Open in IMG/M
3300005610|Ga0070763_10011218All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3703Open in IMG/M
3300005610|Ga0070763_10053023All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1935Open in IMG/M
3300005610|Ga0070763_10156402All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1193Open in IMG/M
3300005618|Ga0068864_101819237All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae614Open in IMG/M
3300005921|Ga0070766_10515400All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae796Open in IMG/M
3300005952|Ga0080026_10142210All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp.690Open in IMG/M
3300006163|Ga0070715_10055707All Organisms → cellular organisms → Bacteria1717Open in IMG/M
3300006176|Ga0070765_100243013All Organisms → cellular organisms → Bacteria1649Open in IMG/M
3300006176|Ga0070765_100797326All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales893Open in IMG/M
3300007982|Ga0102924_1290810Not Available654Open in IMG/M
3300009552|Ga0116138_1094613Not Available831Open in IMG/M
3300010371|Ga0134125_10226888All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2077Open in IMG/M
3300010399|Ga0134127_11487545All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium750Open in IMG/M
3300010401|Ga0134121_12681266All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ungokensis543Open in IMG/M
3300010859|Ga0126352_1214387All Organisms → cellular organisms → Bacteria → Terrabacteria group854Open in IMG/M
3300010865|Ga0126346_1063416All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2877Open in IMG/M
3300010865|Ga0126346_1347471Not Available646Open in IMG/M
3300010866|Ga0126344_1158623All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1181Open in IMG/M
3300010866|Ga0126344_1283680Not Available536Open in IMG/M
3300010866|Ga0126344_1450064All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1335Open in IMG/M
3300010867|Ga0126347_1400695Not Available549Open in IMG/M
3300010867|Ga0126347_1536944Not Available876Open in IMG/M
3300010877|Ga0126356_10520207All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1367Open in IMG/M
3300010880|Ga0126350_10894917Not Available642Open in IMG/M
3300011270|Ga0137391_10109189Not Available2398Open in IMG/M
3300012924|Ga0137413_10165895Not Available1457Open in IMG/M
3300014325|Ga0163163_11245244All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia806Open in IMG/M
3300014501|Ga0182024_10010067All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria19374Open in IMG/M
3300014501|Ga0182024_12684969Not Available533Open in IMG/M
3300015242|Ga0137412_10025349All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4836Open in IMG/M
3300017946|Ga0187879_10009979All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6098Open in IMG/M
3300018019|Ga0187874_10039459All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2265Open in IMG/M
3300018060|Ga0187765_10017461All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3356Open in IMG/M
3300019260|Ga0181506_1157797Not Available537Open in IMG/M
3300019887|Ga0193729_1032080All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2209Open in IMG/M
3300020069|Ga0197907_10469680All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ungokensis575Open in IMG/M
3300020082|Ga0206353_10876584All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ungokensis538Open in IMG/M
3300020581|Ga0210399_11555112Not Available511Open in IMG/M
3300020583|Ga0210401_10057377All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3671Open in IMG/M
3300021171|Ga0210405_11204822All Organisms → cellular organisms → Bacteria → Terrabacteria group561Open in IMG/M
3300021181|Ga0210388_10224537All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1646Open in IMG/M
3300021181|Ga0210388_10271200All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1490Open in IMG/M
3300021181|Ga0210388_10446402All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1137Open in IMG/M
3300021286|Ga0179583_1093885Not Available514Open in IMG/M
3300021402|Ga0210385_10554182Not Available875Open in IMG/M
3300021403|Ga0210397_10931543Not Available673Open in IMG/M
3300021405|Ga0210387_10306048All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1399Open in IMG/M
3300021406|Ga0210386_10486831All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1066Open in IMG/M
3300021406|Ga0210386_11041762All Organisms → cellular organisms → Bacteria696Open in IMG/M
3300021407|Ga0210383_11284594All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha pittospori612Open in IMG/M
3300021477|Ga0210398_10207175All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1598Open in IMG/M
3300021478|Ga0210402_10061031All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium3314Open in IMG/M
3300022499|Ga0242641_1048421Not Available509Open in IMG/M
3300024288|Ga0179589_10104790All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1160Open in IMG/M
3300025464|Ga0208076_1000020All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia13119Open in IMG/M
3300025474|Ga0208479_1056104All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia770Open in IMG/M
3300025504|Ga0208356_1005298All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3050Open in IMG/M
3300025588|Ga0208586_1004124All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae4031Open in IMG/M
3300025588|Ga0208586_1042148All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1046Open in IMG/M
3300025604|Ga0207930_1102234All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia652Open in IMG/M
3300025625|Ga0208219_1060432All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia917Open in IMG/M
3300025627|Ga0208220_1106286Not Available750Open in IMG/M
3300025634|Ga0208589_1079539Not Available788Open in IMG/M
3300025634|Ga0208589_1116576Not Available622Open in IMG/M
3300025905|Ga0207685_10141951All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1078Open in IMG/M
3300025912|Ga0207707_10967829All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium700Open in IMG/M
3300025915|Ga0207693_11103702Not Available602Open in IMG/M
3300025928|Ga0207700_10499625Not Available1076Open in IMG/M
3300025928|Ga0207700_11789707Not Available540Open in IMG/M
3300026095|Ga0207676_10946400All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides ungokensis847Open in IMG/M
3300026121|Ga0207683_11337118Not Available663Open in IMG/M
3300026557|Ga0179587_10185054All Organisms → cellular organisms → Bacteria1314Open in IMG/M
3300027096|Ga0208099_1035650All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia713Open in IMG/M
3300027505|Ga0209218_1096567All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia617Open in IMG/M
3300027567|Ga0209115_1113290Not Available614Open in IMG/M
3300027619|Ga0209330_1076953Not Available761Open in IMG/M
3300027855|Ga0209693_10004030All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6672Open in IMG/M
3300027884|Ga0209275_10412919Not Available762Open in IMG/M
3300027884|Ga0209275_10497031Not Available695Open in IMG/M
3300027889|Ga0209380_10430758All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia772Open in IMG/M
3300027895|Ga0209624_10242559All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1198Open in IMG/M
3300027895|Ga0209624_10271655All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1128Open in IMG/M
3300027908|Ga0209006_10132427All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2196Open in IMG/M
3300027908|Ga0209006_11121790Not Available619Open in IMG/M
3300029701|Ga0222748_1095201Not Available573Open in IMG/M
3300030712|Ga0307921_1005097All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1336Open in IMG/M
3300030863|Ga0265766_1009321Not Available685Open in IMG/M
3300031715|Ga0307476_10710352All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia744Open in IMG/M
3300032515|Ga0348332_11985034All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria572Open in IMG/M
3300032770|Ga0335085_10004562All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae22853Open in IMG/M
3300032783|Ga0335079_10000664All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia39346Open in IMG/M
3300032783|Ga0335079_10275726All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium1842Open in IMG/M
3300032805|Ga0335078_10000522All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia59303Open in IMG/M
3300032805|Ga0335078_10177017All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium2989Open in IMG/M
3300032805|Ga0335078_10235856All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2509Open in IMG/M
3300032828|Ga0335080_10048158All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4706Open in IMG/M
3300032895|Ga0335074_10037603All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia6755Open in IMG/M
3300032897|Ga0335071_10103179All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2797Open in IMG/M
3300032954|Ga0335083_10323178All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1346Open in IMG/M
3300033134|Ga0335073_10232501All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2261Open in IMG/M
3300033134|Ga0335073_10494251All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1399Open in IMG/M
3300033134|Ga0335073_11258088All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia736Open in IMG/M
3300034124|Ga0370483_0150704Not Available782Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil12.90%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil11.29%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil10.48%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil9.68%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil8.06%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil7.26%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.26%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.84%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.42%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.42%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.61%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.61%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost1.61%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.61%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.81%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.81%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.81%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.81%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.81%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.81%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.81%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil0.81%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.81%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.81%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2189573001Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)EnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001384Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012EnvironmentalOpen in IMG/M
3300001452Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300005952Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300007982Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaGEnvironmentalOpen in IMG/M
3300009552Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010859Boreal forest soil eukaryotic communities from Alaska, USA - C5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010865Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010866Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010867Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010877Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010880Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300018019Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150EnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300019260Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300020069Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020082Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021286Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16RNAfungal (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300022499Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025464Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025474Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025504Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025588Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025604Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025625Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025627Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025634Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027096Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)EnvironmentalOpen in IMG/M
3300027505Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027567Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027619Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300029701Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030712Metatranscriptome of soil microbial communities from Risofladan, Vaasa, Finland - OX-3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030863Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032895Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3EnvironmentalOpen in IMG/M
3300032897Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300034124Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FD2_024080902189573001Grass SoilELWKRVIGFVAGYLTGVSEGREGMQRARKSLDAIRTSPEVRRMVADGVGLAQGILGRVAKGGLSGAISQVSELITGGTTGDEQRRAA
INPhiseqgaiiFebDRAFT_10035087113300000364SoilSEGRDGLQRARESLDAIRSSPELRRLVGEAIGVTQAVVSRAAKGGLGSTVREVTELIASRAASARERRAA*
JGI20190J14840_100629333300001384Arctic Peat SoilMETIIGFIAGYLTGVSQGRAGMERARTSLDEIRKSPEVRRMVADGVGLAQVVLGRVAKGGLSGAIGGVSDLVTGSAPAGDERRAA*
JGI20190J14840_101871723300001384Arctic Peat SoilMETIIGFIAGYLTGVSQGRAGMERARSSLDEIRKSPEVRRMVADGVGLAQVVLGRVAKGGLSGAIGGVSDLITGSAPAGDERRAA*
JGI20190J14840_102372113300001384Arctic Peat SoilMETIIGFVAGYLTGVSEGREGMQRARKSLDAIRTSPEVRRLVGEGIGLAQVVLARVAKGGLSGAIGGVSELITGTAAGGDERRAA*
JGI20203J14952_101216833300001452Arctic Peat SoilMETIIGFIAGYLTGVSQGRAGMERARTSLDEIRKSPEVRRMVADGVGLAQVVLGRVAKGGLSGAIGGV
JGIcombinedJ26739_10029714033300002245Forest SoilMETIIGFVAGYLTGVSEGREGLQRARKSLDAIRTSPEVRRMVADGVGLAQGLLGRVAKGSLSGAIGQVSELITGGTTKGEERSAA*
Ga0062387_10087821413300004091Bog Forest SoilMETIIGFIAGYLTGVSEGREGMQRARKSLDAIRTSPEVRRMVADGVGLAQGILGRVAKGGLSGAIGQVSELITGGTTGDEQRRAA*
Ga0062595_10017829223300004479SoilMETIIGFIAGYLTGVSESRDGVQRARQSLEAIRTSPELRRLVGEAVGVTQAVVSRAAKGGLGSTVSEVTELIAGRAASARERRAA*
Ga0070682_10010196513300005337Corn RhizosphereMETIIGFIAGYLTGVSEGRDGLQRARKSLEAIRTSPELRRMVGEAVGVTQAVVSRAAKGGLGGTVGEVTELIASRASARERRAT*
Ga0070714_10042394323300005435Agricultural SoilMETIIGFVAGYLTGVSEGREGMQRARKSLDAIRTSPEVRRMVADGVGLAQGILGRIAKGGLSGAIGQVSELITGGTTRDEERSAA*
Ga0070714_10051296633300005435Agricultural SoilAGYLTGVSEGRDGLQRARKSLEAIRTSPELRRMVGEAVGVTQAVVSRAAKGGLGGTVGEVTELIASRASARERRAT*
Ga0070713_10051907813300005436Corn, Switchgrass And Miscanthus RhizosphereMETIIGFIAGYLTGVSEGRDGLQRARKSLEAIRTSPELRRLVGEAVGVTQAVVSRAAKGGLGSTVGEVTELIASRASARERRAA*
Ga0070713_10221442613300005436Corn, Switchgrass And Miscanthus RhizosphereFIAGYLTGMSEGRDGLKRARASLEAIRNSPEVRRLMSDAVTVAQGVAGRAAKGGLSSTVSSVAEMIASRAAGRDQHAA*
Ga0070710_1003959533300005437Corn, Switchgrass And Miscanthus RhizosphereMETIIGFIAGYLTGMSEGRDGLKRARASLEAIRNSPEVRRLMSDAVTVAQGVAGRAAKGGLSSTVSSVAEMIASRAAGRDQHAA*
Ga0070710_1058795813300005437Corn, Switchgrass And Miscanthus RhizosphereMETIIGFVAGYLTGVSEGREGMQRARKSLDAIRTSPEVRRMVADGVGLAQGILGRIAKGGLSGAIGQVSELITAGTAGDKERRAA*
Ga0070678_10214901113300005456Miscanthus RhizosphereMETIIGFIAGYLTGVSEGRDGLRRARKSLEAIRTSPELRRMVGEAVGVTQAVVSRAAKGGLGSTVSEVTELIASRASARERRAA*
Ga0070681_1088317923300005458Corn RhizosphereMETIIGFIAGYLTGVSEGRDGLQRARKSLEAIRTSPELRRMVGEAVGVTQAVVSRAAKGGLGSTVGEVTELIASRASARE
Ga0070664_10175642113300005564Corn RhizosphereMETIIGFIAGYLTGVSEGRDGLQRARKSLEAIRTSPELRRMVGEAVGVAQAVVSRAAKGGLGSTVGEVTELIASRASARERRAA*
Ga0070762_1041264813300005602SoilMETIIGFIAGYLTGVSQGRAGMERARTSLDEIRKSPEVRRMVADGVGLAQVVLGRVAKGGLSGAIGGVSDLITGSTPAGDERRAA*
Ga0070762_1081554823300005602SoilMETIIGFVVGYLTGVSEGRDGLKRARASVQAIRNSPEFRRMVSDAVTVAQGMAGRAAKGGLSGTVSSVAELINSRAGERGQRAA*
Ga0070763_1001121833300005610SoilMETIIGFVVGYLTGVSEGRDGLKRARASVQAIRNSPEFRRMVSDAVTVAQGMAGRAAKGGLSGTVSSVAELISNRASERGQRAA*
Ga0070763_1005302333300005610SoilMETIIGFVAGYLTGVSEGREGLQRARKSLDAIRTSPEVRRMVADGVGLAQGLLGRVAKGGLSGAIGQVSELITGATTKDEERSAA*
Ga0070763_1015640233300005610SoilMETIIGFIAGYLTGVSQGRAGMERARTSLEAIRTSPEVRRMVADGVGLAQVVLGRVAKGGLSGAIGGVSDLITGSTPAGDERRAA*
Ga0068864_10181923733300005618Switchgrass RhizosphereMETIIGFIAGYLTGVSEGRDGLQRARKSLEAIRTSPELRRMVGEAVGVAQAVVSRAAKGGLGSTVGEVTELIASRAS
Ga0070766_1051540013300005921SoilMETIIGFIAGYLTGVSQGRAGMERARTSLDEIRKSPEVRRMVADGVGLAQVVLGRVAKGGLSGAIGGVSDLITGSAPAGDERRAA*
Ga0080026_1014221033300005952Permafrost SoilMETIIGFVAGYLTGVSEGREGMQRARKSLDAIRTSPEVRRMVADGVGLAQGILGRIAKGGLSGAIGQVSE
Ga0070715_1005570733300006163Corn, Switchgrass And Miscanthus RhizosphereMETIIGFIAGYLTGVSEGRDGLQRARKSLEAIRTSPELRRMVGEAVGVTQAVVSRAAKGGLGSTVGEVTELIASRASARERRAT*
Ga0070765_10024301323300006176SoilMETIIGFIAGYLTGVSQGRAGMERARTSLEAIRTSPEVRRMVADGVGLAQVVLGRVAKGGLSGAIGGVSDLITGSAPAGDERRAA*
Ga0070765_10079732613300006176SoilMETIIGFVAGYLTGVSEGREGMQRARKSLDAIRTSPEVRRMVADGVGLAQGLLGRVAKGGLSGAIGQVSELITGATTKDEERSAA*
Ga0102924_129081023300007982Iron-Sulfur Acid SpringGLQRARKSLDAIRTSPELRRLVGEGVGVAQIVLGRVARGGLSGAIGGVSELITGSAPADREDRRAA*
Ga0116138_109461323300009552PeatlandMETIIGFVAGYLTGVSEGREGMDRARKSLEAIRTSPELRRLVADGVGLAQVVLGRVAKGGLSGALGGVSELITGSAASSRDERRAA*
Ga0134125_1022688833300010371Terrestrial SoilMETIIGFIAGYLTGVSEGRDGLQRARKSLEAIRTSPELRRMVGEAVGVTQAVVSRAAKGGLGSTVSEVTELIASRASARERRAA*
Ga0134127_1148754513300010399Terrestrial SoilPTDKAGTTMETIIGFIAGYLTGVSEGRDGLQRARKSLEAIRTSPELRRMVGEAVGVTQAVVSRAAKGGLGSTVGEVTELIASRASARERRAA*
Ga0134121_1268126613300010401Terrestrial SoilMETIIGFIAGYLTGVSEGRDGLQRARKSLEAIRTSPELRRMVGEAVGVAQAVVSRAAKGGLGSTVGEV
Ga0126352_121438733300010859Boreal Forest SoilMETIIGFIAGYLTGVSQGREGMQRARTSLAAIRTSPEVRRMVADGVGLAQVVLGRVAKGGLSGAVGGVSDLITGNAQAGEERRAA*
Ga0126346_106341653300010865Boreal Forest SoilMETIIGFIAGYLTGVSQGRAGMERARTSLDEIRKSPEVRRMVADGVGLAQVVLGRVAKGGLTGAIGGVSDLITGSAPAGDERRAA*
Ga0126346_134747133300010865Boreal Forest SoilMETIIGFVAGYLTGVSEGREGMQRARKSLNAIRTSPEVRRLVADGVGLTQGILGRVAKGGLSGAIGQVSELITAGTAGDKERRAA*
Ga0126344_115862333300010866Boreal Forest SoilMETIIGFIAGYLTGVSQGRAGMERARTSLDEIRKSPEVRRMVADGVGLAQVVLGRVAKGGLSGAISGVSDVITGSTPARDERRAA*
Ga0126344_128368023300010866Boreal Forest SoilMETIIGFIAGYLTGVSQGRAGMERARTSLDEIRKSPEVRRLVSDGVGLAQVVLGRVAKGGISGAIGGVSDLITGSAPAGDERRAA*
Ga0126344_145006423300010866Boreal Forest SoilMETIIGFVAGYLTGVSEGREGMQRARKSLDAIRTSPEVRRMVADGVGLAQGILGRVAKGGLSGAIGQVSELITGGTAGDEKRRAA*
Ga0126347_140069513300010867Boreal Forest SoilMETIIGFIAGYLTGVSQGRAGMERARTSLDEIRKSPEVRRMVADGVGLAQVVLGRVAKGGLTGAIGGVSDLITGSAAAGDERRAA*
Ga0126347_153694423300010867Boreal Forest SoilMETIIGFIAGYLTGVSQGRAGLERARTSLDEIRKSPEVRRMVADGVGLAQVVLGRVAKGGLSGAIGGVSDLITGSAPAGDERRAA*
Ga0126356_1052020713300010877Boreal Forest SoilMETIIGFVAGYLTGVSEGREGLQRARKSLNAIRTSPEVRRLVADGVGLTQGILGRVAKGGLSGAIGQVSELITGGTTEGKERRAA*
Ga0126350_1089491713300010880Boreal Forest SoilMETIIGFIAGYLTGVSQGRAGMERARTSLDEIRKSPEVRRLVSDGVGLAQAVLGRVAKGGISGAIGGVSDLLTGSAPAGDERRAA*
Ga0137391_1010918933300011270Vadose Zone SoilMETIIGFIAGYLTGVSQGREGMERARKSLDAIRTSPEVRRMVADGVGLAQGIVGRVAKNGLSGVAGGVAEIIANGAAPGRDERRAA*
Ga0137413_1016589523300012924Vadose Zone SoilMETIIGFIAGYLTGVSQGREGMERARKSLDAIRTSPEVRRMAGDGVGLAQAILGRVAKNGLSGLAGGVAEIIANGAAPGRDERRAA*
Ga0163163_1124524413300014325Switchgrass RhizosphereMETIIGFIAGYLTGVSEGRDGLRRARKSLEAIRTSPELRRMVGEAVGVTQAVVSRAAKGGLGGTVGEVTELIASRASARERRAT*
Ga0182024_10010067153300014501PermafrostMETIIGFIAGYLTGVSQGREGMQRARTSLEAIRTSPEVRRMVADGVGLAQVVLGRVAKGGLSGAIGGVSDLITGNAQAGDERRAA*
Ga0182024_1268496913300014501PermafrostLTGVSEGREGMARARKSLDSIRTSPELRRLVADGVGLAQVVLGRVAKGGLSGAIGGVSELITGSAAAGRDDRRAA*
Ga0137412_1002534923300015242Vadose Zone SoilMETIIGFIAGYLTGVSQGREGMERARKSLDAIRTSPEVRRMAGDGVGLAQAILGRVAKNGLSGLAGGVVEIIANGAAPGRDERCAA*
Ga0187879_1000997953300017946PeatlandMETIIGFVAGYLTGVSEGREGMDRARKSLEAIRTSPELRRLVADGVGLAQVVLGRVAKGGLSGALGGVSELITGSAASSRDERRAA
Ga0187874_1003945943300018019PeatlandMETIIWFVAGYLTGVSEGREGMDRARKSLEAIRTSPELRRLVADGVGLAQVVLGRVAKGGLSGALGGVSELITGSAASSRDERRAA
Ga0187765_1001746143300018060Tropical PeatlandMETIIGFIVGYLTGVSEGRDGLKRARASLEAIRNSPEFRRLLSDGVTVAQGVAGRAAKGGLSSTVSGVTELISSRAAARDRRAA
Ga0181506_115779713300019260PeatlandMETIIGFIAGYLTGVSQGRDGLERARKSLDAIRTSPELRRMVADGVSLGQGILGQAAKNGLSGALGGVAEMVTRNGSPARDERRAA
Ga0193729_103208013300019887SoilMETIIGFVAGYLTGVSEGREGMQRARKSLDAIRTSPEVRRMVADGVGLAQGILGRIAKGGLSGAIGQVSELITAGTAGDKERRAA
Ga0197907_1046968013300020069Corn, Switchgrass And Miscanthus RhizosphereMETIIGFIAGYLTGVSEGRDGLQRARKSLEAIRTSPELRRMVGEAVGVAQAVVSRAAKGGLGSTVGEVTELIASRASARE
Ga0206353_1087658413300020082Corn, Switchgrass And Miscanthus RhizosphereMETIIGFIAGYLTGVSEGRDGLQRARKSLEAIRTSPELRRMVGEAVGVAQAVVSRAAKGGLGSTVGEVTE
Ga0210399_1155511213300020581SoilMETIIGFIAGYLTGMSEGRDGLKRARASLEAIRNSPEVRRLMSDAVTVAQGVAGRAAKGGLSSTVSSVAEMIASRAAGRDQHAA
Ga0210401_1005737733300020583SoilMETIIGFIAGYLTGMSEGRDGLKRARASLEAIRNSPEVRRFMSDAVTVAQGVAGRAAKGGLSSTVSSVAEMIASRAAGRDQHAA
Ga0210405_1120482233300021171SoilMETIIGFIAGYLTGVSQGRAGMERARTSLEAIRTSPEVRRMVADGVGLAQVVLGRVAKGGLSGAIGGVSDL
Ga0210388_1022453723300021181SoilMETIIGFIAGYLTGVSQGRAGMERARTSLEAIRTSPEVRRMVADGVGLAQVVLGRVAKGGLSGAIGGVSDLITGSAPAGDERRAA
Ga0210388_1027120033300021181SoilMETIIGFVVGYLTGVSEGRDGLKRARASVQAIRNSPEFRRMVSDAVTVAQGMAGRAAKGGLSGTVSSVAELINSRAGERGQRAA
Ga0210388_1044640213300021181SoilMETIIGFVAGYLTGVSEGREGFQRARKSLDAIRTSPEVRRMVADGVGLAQGLLGRVAKGGLSGAIGQVSELITGATTKDEERSAA
Ga0179583_109388513300021286Vadose Zone SoilMETIIGFVAGYLTGVSEGRDGMQRARKSLDAIRTSPEVRRLVADGVGLAQGLLGRVAKGGLSGAIGQVSELITAGTAGDKERRAA
Ga0210385_1055418223300021402SoilEGREGLQRARKSLDAIRTSPEVRRMVADGVGLAQGLLGRVAKGGLSGAIGQVSELITGATTKDEERSAA
Ga0210397_1093154333300021403SoilMETIIGFVAGYLTGVSEGREGLQRARKSLDAIRTSPEVRRMVADGVGLAQGLLGRVAKGGLSGAIGQVSELITGATTKDEERSAA
Ga0210387_1030604833300021405SoilMETIIGFVAGYLTGVSEGREGLQRARKSLDAIRTSPEVRRMVADGVGLAQGLLGRIAKGGLSGAIGQVSELITGATTKDEERSAA
Ga0210386_1048683133300021406SoilMETIIGFIAGYLTGVSQGRAGMERARTSLEAIRTSPEVRRMVADGVGLAQVVLGRVAKGGLSGAIGGVSDLITGSTPAGDERRAA
Ga0210386_1104176233300021406SoilMETIIGFVAGYLTGVSEGREGMQRARKSLDAIRTSPEVRRMVADGVGLAQGLLGRVAKGGLSGAIGQVSELITGATTKDEERSAA
Ga0210383_1128459423300021407SoilGRDGLKRARASVQAIRNSPEFRRMVSDAVTVAQGMAGRAAKGGLSGTVSSVAELINSRAGERGQRAA
Ga0210398_1020717513300021477SoilMETIIGFIAGYLTGVSQGRAGMERARTSLEAIRTSPEVRRMVADGVGLAQVVLGRVAKGGLSGAIGGVSDLITGSAPAGDER
Ga0210402_1006103133300021478SoilMETIIGFVAGYLTGVSEGREGMQRARKSLDAIRTSPEVRRMVADGVGLAQGILGRVAKGGLSGAISQVSELITGGTTGDEQRRAA
Ga0242641_104842123300022499SoilMETIIGFVAGYLTGVSEGREGLQRARKSLDAIRTSPEVRRMVADGVGLAQGLLGRVAKGGLSGVIGQVSELITGATTKDEERSAA
Ga0179589_1010479033300024288Vadose Zone SoilMETIIGFVAGYLTGVSEGREGMQRARKSLDAIRTSREVRRMVADGVGLAQGILGRIAKGGLSGAIGQVSELITAGTAGDKERRAA
Ga0208076_100002083300025464Arctic Peat SoilMETIIGFVAGYLTGASEGREGMQRARKSLDAIRTSPEVRRLVGEGIGLAQVVLGRVAKGGLSGAIGGVSELINGTAAGGDERRAA
Ga0208479_105610433300025474Arctic Peat SoilMETIIGFIAGYLTGVSQGRDGMERARKSLDAIRTSPEVRRMVADGVGLAQGILGLVAKNGLSGVASGVGEIITGGVAPSRDERRAA
Ga0208356_100529843300025504Arctic Peat SoilMETIIGFVAGYLTGVSEGREGMQRARKSLDAIRTSPEVRRLVGEGIGLAQVVLARVAKGGLSGAIGGVSELITGTAAGGDERRAA
Ga0208586_100412453300025588Arctic Peat SoilLTGVSQGRAGMERARSSLDEIRKSPEVRRMVADGVGLAQVVLGRVAKGGLSGAIGGVSDLVTGSAPAGDERRAA
Ga0208586_104214813300025588Arctic Peat SoilMETIIGFIAGYLTGVSQGRAGMERARSSLDEIRKSPEVRRMVADGVGLAQVVLGRVAKGGLSGAIGGVSDLITGSAPAGDERRAA
Ga0207930_110223433300025604Arctic Peat SoilMETIIGFVAGYLTGVSEGREGMQRARKSLDAIRTSPEVRRLVGEGIGLAQVVLGRVAKGGLSGAIGGVSE
Ga0208219_106043213300025625Arctic Peat SoilRSGQAALRKAGRTMETIIGFIAGYLTGVSQGRAGMERARTSLDEIRKSPEVRRMVADGVGLAQVVLGRVAKGGLSGAIGGVSDLITGSPPAGDERVAA
Ga0208220_110628623300025627Arctic Peat SoilGLVLRSGQAALRKAGRTMETIIGFIAGYLTGVSQGRAGMERARTSLDEIRKSPEVRRMVADGVGLAQVVLGRVAKGGLSGAIGGVSDLITGSPPAGDERVAA
Ga0208589_107953913300025634Arctic Peat SoilMETIIGFIAGYLTGVSQGREGMQRARTSLEAIRTSPEVRRMVADGVGLAQLVLGRVAKGGLSGAIGGVSDLITGSAPAGDERRAA
Ga0208589_111657623300025634Arctic Peat SoilMETIIGFIAGYLTGVSQGRAGMERARTSLDEIRKSPEVRRMVADGVGLAQVVLGRVAKGGLSGAIGGVSDLITGSPPAGDERVAA
Ga0207685_1014195113300025905Corn, Switchgrass And Miscanthus RhizosphereMETIIGFIAGYLTGVSEGRDGLQRARKSLEAIRTSPELRRMVGEAVGVTQAVVSRAAKGGLGSTVGEVTELIASRASARERPAA
Ga0207707_1096782923300025912Corn RhizosphereMETIIGFIAGYLTGVSEGRDGLQRARKSLEAIRTSPELRRMVGEAVGVTQAVVSRAAKGGLGSTVGEVTELIASRASARERRAA
Ga0207693_1110370213300025915Corn, Switchgrass And Miscanthus RhizosphereMETIIGFVAGYLTGVSEGREGMQRARKSLDAIRTSPEVRRMVADGVGLAQGILGRIAKGGLSGAIGQVSELITAGTTGDKERRAA
Ga0207700_1049962533300025928Corn, Switchgrass And Miscanthus RhizosphereMETIIGFIAGYLTGVSEGRDGLRRARKSLEAIRTSPELRRMVGEAVGVTQAVVSRAAKGGLGGTVGEVTELIASRASARERRAT
Ga0207700_1178970713300025928Corn, Switchgrass And Miscanthus RhizosphereMETIIGFIAGYLTGVSEGRDGLQRARKSLEAIRTSPELRRMVGEAVGVTQAVVSRAAKGGLGSTVSEVTELIASRASARERRAA
Ga0207676_1094640013300026095Switchgrass RhizosphereMETIIGFIDGYLTGVSEGRDGLQRARKSLEAIRTSPELRRMVGEAVGVAQAVVSRAAKGGLGSTVGEVTELIASRASARERRAA
Ga0207683_1133711823300026121Miscanthus RhizosphereMETIIGFIAGYLTGVSEGRDGLRRARKSLEAIRTSPELRRMVGEAVGVTQAVVSRAAKGGLGSTVSEVTELIASRASARERRAA
Ga0179587_1018505433300026557Vadose Zone SoilDAPHADRDLQSGQPQGKAGRTMETIIGFVAGYLTGVSEGREGMQRARKSLDAIRTSPEVRRMVADGVGLAQGILGRIAKGGLSGAIGQVSELITAGTAGDKERRAA
Ga0208099_103565013300027096Forest SoilMETIIGFVVGYLTGVSEGRDGLKRARASVQAIRNSPEFRRMVSDAVTVAQGMAGRAAKGGLSGTVSSVAELINSRAGERGRARAGRAMA
Ga0209218_109656733300027505Forest SoilMETIIGFIAGYLTGVSQGRAGMERARTSLDEIRKSPEVRRMVADGVGLAQVVLGRVAKGGLSGAIGGVSDLITGSAPAGDE
Ga0209115_111329013300027567Forest SoilMETIIGFVAGYLTGVSEGREGMQRARKSLDAIRTSPEVRRMVADGVGLAQGILGRVAKGSLSGAIGQVSELITGGTTKDQERSAA
Ga0209330_107695333300027619Forest SoilMETIIGFVAGYLTGVSEGREGLQRARKSLDAIRTSPEVRRMVADGVGLAQGLLGRVAKGSLSGAIGQVSELITGGTTKGEERSAA
Ga0209693_1000403043300027855SoilMETIIGFVVGYLTGVSEGRDGLKRARASVQAIRNSPEFRRMVSDAVTVAQGMAGRAAKGGLSGTVSSVAELISNRASERGQRAA
Ga0209275_1041291923300027884SoilSLWSGQAALRKAGRTMETIIGFIAGYLTGVSQGRAGMERARTSLDEIRKSPEVRRMVADGVGLAQVVLGRVAKGGLSGAIGGVSDLITGSAPAGDERRAA
Ga0209275_1049703123300027884SoilMETIIGFVVGYLTGVSEGRDGLKRARASVQAIRNSPEFRRMVSDAVTVAQGMAGRAAKGGLSGTVSSVAELINSRAGERG
Ga0209380_1043075813300027889SoilMETIIGFIAGYLTGVSQGRAGMERARTSLEAIRTSPEVRRMVADGMGLAQVVLGRVAKGGLSGAIGGVSDLITGSAPAGDERRAA
Ga0209624_1024255913300027895Forest SoilMETIIGFIAGYLTGVSQGRAGMERARTSLDEIRKSPEVRRMVADGVGLAQVVLGRVAKGGLSGAIGGVSDLITGSAPTGDERRAA
Ga0209624_1027165523300027895Forest SoilMETIIGFIAGYLTGVSQGRAGMERARTSLDEIRKSPEVRRMVADGVGLAQVVLGRVAKGGLSGAIGGVSDLITGSAPAGDERRAA
Ga0209006_1013242713300027908Forest SoilIIGFVAGYLTGVSEGREGLQRARKSLDAIRTSPEVRRMVADGVGLAQGLLGRIAKGGLSGAVSQVSELITGATTKDEERSAA
Ga0209006_1112179013300027908Forest SoilIIGFVAGYLTGVSEGREGLQRARKSLDAIRTSPEVRRMVADGVGLAQGLLGRVAKGSLSGAIGQVSELITGGTTKGEERSAA
Ga0222748_109520123300029701SoilMETIIGFVAGYLTGVSEGREGMQRARKSLDAIRTSPEVRRMVADGVGLAQGLLGRIAKGGLSGAIGQVSELITGATTKDEERSAA
Ga0307921_100509733300030712SoilMETIIGFIAGYLTGVSEGRGGLDRARKSLEAIRTSPELRRILSEAVTVAQGAVGRVSKGGLSAALGGVSEVIGTKAAAPRDRRAA
Ga0265766_100932133300030863SoilMETFIGFVAGYLTGVSEGREGMQRARKSLDAIRTSPEVRRMVADGVGLAQGILGRIAKGGLSGAIGQVGELITGGAAGDEERSAA
Ga0307476_1071035233300031715Hardwood Forest SoilMETIIGFVVGYLTGVSEGKDGLKRARASVQAIRNSPEFRQMVSDAVTVAQGMAGRAAKGGLSGTVSSVAELISNRASERGQRAA
Ga0348332_1198503413300032515Plant LitterMETIIGFVAGYLTGVSEGREGMQRARKSLDAIRTSPEVRRMVADGVGLAQGILGRIAKGGLSGAIGQVGELITGGAAGDEDRSAA
Ga0335085_1000456233300032770SoilMEAFIGFVVGYLTGASEGRDGLKRARASVTAIRDSPEFRRLVSDAVTVAQGMAGRAAKGGLSGTVSGVADLINSRVSDRGQRAA
Ga0335079_10000664313300032783SoilMETIIGFIAGYLTGMSEGRDGLKRARASLEAIRNSPEFRRLVSDAVTATQGLAGRTAKGGLSSAVSGVGELITSRAAARGQRAA
Ga0335079_1027572633300032783SoilMETIIGFIAGYLTGVGEGRDGLQRARKSLEAIRTSPELRRLVGDAVGVTQAMVSRAAKGGLGGTVGEVTELITGRASTREHRAA
Ga0335078_1000052253300032805SoilMETIIGFIAGYLTGVSEGRDGLQRARRSLNAIRTSPELRRLAGDAVGVTQALVSRAAQGGLGGTVGEVTDFLASRASARERRAA
Ga0335078_1017701753300032805SoilMETIIGFIAGYLTGVSEGRDGLQRARKSLEAIRTSPELRRLVGDAVGVTQGVVSRAAKGGLGGTVGEVTELITGRAGPRQRRAA
Ga0335078_1023585623300032805SoilMETIIGFIAGYLTGVSQGRDGMERARKSLDAIRTSPEVRRMVADGVGVAQGILGLVAKNGLSGVASGVGGIITGGAAPGRDERRAA
Ga0335080_1004815843300032828SoilEGRDGLKRARASLEAIRNSPEFRRLVSDAVTATQGLAGRTAKGGLSSAVSGVGELITSRAAARGQRAA
Ga0335074_1003760343300032895SoilMETIIGFVVGYLTGVSEGKDGLKRARASVQAIRNSPEVRRMMSDAVTVAQGMAGRAAKGGLGSTVSSVAELISSRASERGQRAA
Ga0335071_1010317953300032897SoilMETIIGFIIGYLTGVQEGRDGLKRARASLEAIRNSPEFRRLLSDGITVAQGVAGRAAKGGLSSTVSGVTELISSRAAARDRRAA
Ga0335083_1032317813300032954SoilGLKRARASVTAIRNSPEFRRLVSDAVTVAQGVAGRAAKGGLSGTVSGVAELINNRAGDRGQRAA
Ga0335073_1023250133300033134SoilMETIIGFVVGYLTGVSEGKDGLKRARASVQAITNSPEVRRMMSDAVTVAQGMAGRAAKGGLGSTVSSVAELISSRASERGQRAA
Ga0335073_1049425133300033134SoilMETIIGFVVGYLTGASEGRDGLKRARESVQAIRNSPEFRRVVSDAVTVAQGVAARTAKGGLSSAVSDVAELISSRASDRGQRAT
Ga0335073_1125808813300033134SoilMEAFIGFVVGYLTGASEGRDGLKRARASVTAIRNSPEFRRLVSDAVTVAQGVAGRAAKGGLSGTVSGVAELI
Ga0370483_0150704_195_4523300034124Untreated Peat SoilMETIIGFVAGYLTGVSEGREGMQRARKSLDAIRTSPEVRRLVGEGIGLAQVVLTRVAKGGLSGAIGGVSELITGSAAGGDERRAA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.