Metagenome / Metatranscriptome Family F069393

Overview

Basic Information

• Family ID: F069393
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 124
• Average Sequence Length: 47 residues
• Representative Sequence: APLGIPEVPPIPQLPVQVSNGKLAAAVAVLQPDAAARHNGDDADSGA
• Number of Associated Samples: 96
• Number of Associated Scaffolds: 124

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 2.42 %
• % of genes from short scaffolds (< 2000 bps): 2.42 %
• Associated GOLD sequencing projects: 90
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.21

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (98.387 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (16.129 % of family members)
• Environment Ontology (ENVO): Unclassified (25.806 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (40.323 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Fibrous
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 0.00%
  β-sheet: 0.00%
  Coil/Unstructured: 100.00%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00106	adh_short	5.65
PF01242	PTPS	4.84
PF13466	STAS_2	4.03
PF02511	Thy1	3.23
PF02861	Clp_N	3.23
PF13602	ADH_zinc_N_2	2.42
PF02954	HTH_8	2.42
PF00248	Aldo_ket_red	2.42
PF12802	MarR_2	1.61
PF00313	CSD	1.61
PF14691	Fer4_20	1.61
PF01740	STAS	0.81
PF04545	Sigma70_r4	0.81
PF00211	Guanylate_cyc	0.81
PF00378	ECH_1	0.81
PF00589	Phage_integrase	0.81
PF01590	GAF	0.81
PF01061	ABC2_membrane	0.81
PF12840	HTH_20	0.81
PF08241	Methyltransf_11	0.81
PF07883	Cupin_2	0.81
PF08240	ADH_N	0.81
PF07730	HisKA_3	0.81
PF02702	KdpD	0.81
PF08669	GCV_T_C	0.81
PF06445	GyrI-like	0.81
PF01636	APH	0.81
PF00440	TetR_N	0.81
PF07228	SpoIIE	0.81
PF00107	ADH_zinc_N	0.81
PF12695	Abhydrolase_5	0.81
PF13376	OmdA	0.81
PF02909	TetR_C_1	0.81
PF14690	zf-ISL3	0.81
PF00196	GerE	0.81
PF02604	PhdYeFM_antitox	0.81
PF13191	AAA_16	0.81
PF14520	HHH_5	0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0720	6-pyruvoyl-tetrahydropterin synthase	Coenzyme transport and metabolism [H]	4.84
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	3.23
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	3.23
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.81
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.81
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.81
COG2205	K+-sensing histidine kinase KdpD	Signal transduction mechanisms [T]	0.81
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.81
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.81
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.81
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.81
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.81

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
All Organisms	root	All Organisms	1.61 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
cellular organisms	root	All Organisms → cellular organisms	1.61 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.61 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.61 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.81 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.39 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300020579|Ga0210407_10389137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1091
3300021559|Ga0210409_11240935	Not Available	621
3300025929|Ga0207664_10189160	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1771

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.32%
Host-Associated	Host-Associated	9.68%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.42%
Aquatic	Environmental → Aquatic	12.90%
Plants	Host-Associated → Plants	9.68%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.42%
Freshwater	Environmental → Aquatic → Freshwater	12.10%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.42%
Sediment	Environmental → Aquatic → Sediment	0.81%
Roots	Host-Associated → Plants → Roots	0.81%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.81%
Loam	Environmental → Terrestrial → Soil → Loam	23.39%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.23%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%

Subtype

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.58%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	17.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	9.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.23%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.23%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%

Habitat

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	16.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.71%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	9.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.65%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.23%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.23%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.23%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.23%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.61%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.81%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.81%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental
3300010085	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental
3300019189	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3 metaT (Metagenome Metatranscriptome)	Environmental
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated
3300026864	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_O3 (SPAdes)	Environmental
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_06626240	2170459010	Grass Soil	GAPLEIPEVSQIPQLPAQVSNGKLAAAVAVLEPDAVARRNGGDTHPGT
FD1_10736680	2170459024	Grass Soil	VAKEEAEIESGAPLEIPQVPPIPTLPTQVGNGKLTAAAVAPNNDDDTDPGA
deepsgr_02543890	2199352025	Soil	SDQVAVTAEAEIPGGAPLEIPEVPPIPQLPVQVSNGKAAAAVAVLEPDAVARHNGDDAHSGG
Ga0066677_104298661	3300005171	Soil	DVATEEAEIESGAPLEIPEVPPIPQLPVQVSNGKQAAAVAVLPDAASGHNGDDAHPDA*
Ga0066683_105312291	3300005172	Soil	PLEIPQVPPIPTLPTQVGNGKLAAAAVARHNDDDAAPGA*
Ga0070714_1020387992	3300005435	Agricultural Soil	APLEIPEVPPIPQLPVQVSNGKQAAAVAVLPDAASGHNGEDAHPDA*
Ga0070710_104088062	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	DVAKEEAEIESGAPLEIPQVPPIPTLPTQVGNGKLAAAAVARHKDDDADSGA*
Ga0070711_1008969541	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	GAPLEIPEVPQIPQLPVQVSNGKVAAAVAVLEPDAVARHNGDDVHSGV*
Ga0070706_1000758246	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	EDVAKEEAEIESGAPLQIPEVPPIPTLPMQAGNGKQAAAAVARHNDDDADPGA*
Ga0070698_1002874183	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	EITSGAPLEIPEVPQIPQLPVQVSNGKVAAAVAVAPHEDEAPSGA*
Ga0070698_1009683132	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	GNEDVAKEEAEIESGAPLQIPEVPPIPTLPMQAGNGKQAAAAVARHNDDDADPGA*
Ga0070698_1009750021	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	AAEAEITSGAPLEIPEVPPIPELPVQASNGTLAAAVAVPQPDAVARHNDDATDSGA*
Ga0070698_1011454451	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	PLEIPEVPQIPQLPVQVSNGKVAAAAVPQPDAVARHNGDDAHLGV*
Ga0070698_1011836592	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	AEAEAEITGGAPLEMPEVPPIPQLPIQVSNGELAAAVAVPQPDAVARHSDDEHPGA*
Ga0070697_1001815921	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	IPEVPPVPELPMQVSNGKLAAATVPQPDAVARHNDDAADSGA*
Ga0070696_1001996514	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	APLEIPQVPPIPTLPTQVGNGKLAAAAVARHNDDDTDPGA*
Ga0066695_103488311	3300005553	Soil	AEIESGAPLEIPEVPPIPTLPTQVGNGKLAAPAVPQPDAVARRNDDDADSGA*
Ga0066706_108718971	3300005598	Soil	IESGAPLQIPQVPPIPTLPTQVGNGKLAAPAVPQPDAVARRNDDDADSGA*
Ga0070763_109399701	3300005610	Soil	APLEIPEVPPIPELPTQASNGKLPVAAAAVPQPDAAARHNDHATDPGE*
Ga0068864_1010077761	3300005618	Switchgrass Rhizosphere	APLEIPQVPPIPTLPTQVGNGKLAAAAVARHKDDDADSGA*
Ga0070717_101534084	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	EAEIESGAPLQIPEVPPIPTLPTQAGNGKLAAAVARHNDDDADSGA*
Ga0070717_115049862	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	ITGGAPLGIPEVPPIPRPSVQVSNGKLAAVAAQSDATARDVGDAYPGA*
Ga0066652_1008949211	3300006046	Soil	EEAEIESGAPLEIPQVPPIPTLPTQVGNGKLAAAAVARHNDDDAAPGA*
Ga0070715_102098612	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	IPEVPPIPTLPMQVGNGKLAAGAVARNNDDDADSGA*
Ga0070716_1010091843	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	IESGAPLEIPQVPPIPTLPTQVGNGKLAAAAVARHNDDDTDPGA*
Ga0075014_1006213141	3300006174	Watersheds	IPQVPPIPTLPMQTGNGKLAATTVPRPGAAARHNDDAADPGA*
Ga0070712_1014076021	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ADFGDEDVAKEEAEIESGAPLQIPEVPPIPTLPTQAGNGKLAAAVARHNDDDADSGA*
Ga0079222_109243391	3300006755	Agricultural Soil	PQLPVQVSNGKLAAAVAVLEPDAVAGHNGDDTHPGT*
Ga0079222_109405731	3300006755	Agricultural Soil	ITSEAPLEIPEVPPIPQLPVQVSNGKQAAAVAVLPDAASGHNGEDAHPDA*
Ga0079221_101231471	3300006804	Agricultural Soil	IPEVPPIPTSPMRAGNGKVAAAAVARHSGDDADSGA*
Ga0079221_114923801	3300006804	Agricultural Soil	PPIPTLPIQAGNGKQAAAAAPRPDAVARHNDDDADPGA*
Ga0075425_1021113341	3300006854	Populus Rhizosphere	PEVPPIPQLPVQVSNGQQTAPVAVLPDAPARHNGDDTHSDA*
Ga0075425_1028764781	3300006854	Populus Rhizosphere	IESGAPLQIPEVPPIPTLPIQAGNGKQAAAAAPRPDAVARRNDDDADPGA*
Ga0075435_1012405211	3300007076	Populus Rhizosphere	PLEIPQVPPIPTLPTPVGNGKLAAAAVARHNNDDTAPGA*
Ga0075435_1016170191	3300007076	Populus Rhizosphere	DEDVATEEAEIESGAPLQIPEVPPIPTLPPQAGNGNMAAAAAPQPGTTPRHNNNDADPGA
Ga0099828_110349851	3300009089	Vadose Zone Soil	PLQIPEVPPIPTLPAHAGNASLAPAAVPQPATMAQHNDDNADSGP*
Ga0066709_1041623171	3300009137	Grasslands Soil	EEAEIESGAPLQIPQVPPIPTLPTQVGNGELAAAAVAQPGAVARHNDDSADPGA*
Ga0075423_119488881	3300009162	Populus Rhizosphere	VPPIPALPAQAGNGKVAAAAAPRPDAAVRRNDDDADPGA*
Ga0075423_123626071	3300009162	Populus Rhizosphere	EEAEIESGAPLEIPQVPPIPTLPTQVGNGKLAAAAVARHKDDDADSGA*
Ga0075423_129225371	3300009162	Populus Rhizosphere	TEEAEIESGAPLQIPEVPPIPTLPPQAGNGNMAAAAAPQPGTTPRRNNNDADPGA*
Ga0116222_12312731	3300009521	Peatlands Soil	IPQLPAQVSNGKPAAAVAVLQPDAAARHNGDDADSGA*
Ga0116216_102869602	3300009698	Peatlands Soil	APLGIPEVPPIPQLPVQVSNGKLAAAVAVLQPDAAARHNGDDADSGA*
Ga0116216_109131051	3300009698	Peatlands Soil	AAAEAEITGGAPLEIPEVPPIPQLPIPESNGKLAAAAVLQPDTVAQHSDDDAHSGA*
Ga0127445_10818351	3300010085	Grasslands Soil	EDVAKEEAEIESGAPLEIPQVPPIPTLSTPVGNGKLAAAAAARHTDDDAAPGA*
Ga0134126_111849111	3300010396	Terrestrial Soil	PQLPVQVSNGKVAAAVAVLEPDAVARHNGDDAHSGA*
Ga0134124_103263573	3300010397	Terrestrial Soil	IPEVPQIPVQVSNGKLTAAVAVPQPDAVARRNGDAHSDV*
Ga0126344_10387751	3300010866	Boreal Forest Soil	LPVQVSNGKLGTAAVPQPDAVPQPDAVARHSDDDAHSGS*
Ga0150983_142618871	3300011120	Forest Soil	EEAAIESGAPLEIPAVPPIPTLPVQAANGELAAAVVPQPGAVARHADDADSGA*
Ga0150983_155596003	3300011120	Forest Soil	EIPDVPQIPQLPVQVSNGKLAAAVAVLEPDAVARHNGDDTHLGT*
Ga0150983_160088721	3300011120	Forest Soil	PQLPAQVSNGKQTAAVAVLPDAPARHNGDDAHSDA*
Ga0137389_100605041	3300012096	Vadose Zone Soil	AAEAEITSGAPLEIPAVPPIPQPSIRVSNGNLAAAAVPEPNAVARHSDDDAHSGA*
Ga0137364_108087002	3300012198	Vadose Zone Soil	VAREEAEIESGAPLEIPEVPPIPMQAANGELAAAAVAVPQPGAVARHNDDADSGA*
Ga0137378_108619521	3300012210	Vadose Zone Soil	DVAAAEAEITSGAPLEIPEVPQIPQIPQLPVQVSNGKQTAAVAVLQPDAMARHNGDDAHSGA*
Ga0137390_107644482	3300012363	Vadose Zone Soil	LEIPAVPPIPQPSIHVSNGSLAAAAVPQPDAVARHGDDDARSGA*
Ga0164309_107886041	3300012984	Soil	EAESTSGAPLEIPEAPPVPQLPVQVSNRTQTVAVAVQPDAAARHNGGDAHSDA*
Ga0134078_103486131	3300014157	Grasslands Soil	EEAQIESGAPLQIPQVPPIPTLPAQVGNSELVAAVARHNDDADPGA*
Ga0134079_104376001	3300014166	Grasslands Soil	EDVAKEEAEIESGAPLEIPQVPPIPTLPTQVGNGKLAAAAVARHNDDDAAPGA*
Ga0134079_106431461	3300014166	Grasslands Soil	SGAPLQIPEVPPIPTLPMQVGNGKVAAAAVPQPGAAGRHSDDADSGA*
Ga0163163_129527111	3300014325	Switchgrass Rhizosphere	FGNEDVAKEEAEIESGAPLEIPQVPPIPTLPTQVGNGKLAAAAVARHNDDDTDPGA*
Ga0157376_127167382	3300014969	Miscanthus Rhizosphere	AIPEVPQIPVQVSNGKLTAAAAVPQPDAVARRNGDAHSGV*
Ga0132258_114088523	3300015371	Arabidopsis Rhizosphere	EIESGAPLQIPEVPPIPTLPLQAGNGNMAAAAAPQPGTTPRRNNNDADPGA*
Ga0182034_117466901	3300016371	Soil	AAEAEAAITGGGPLEVPEAPPIPQLPIQVSNGKPAAAAAVPQPDAAARHSDGDAHSGG
Ga0187812_12632551	3300017821	Freshwater Sediment	APLEIPEVPPIPQPPIQVSNGNLAAAAVPQPDAVAQHSGDDAHSSAKAPPA
Ga0187820_11134231	3300017924	Freshwater Sediment	PQLPVQVSNGNLAAAAVPQPDAVAQHSGDDAHSSAKAPPA
Ga0187806_13304722	3300017928	Freshwater Sediment	EIPEVPPIPQLPVQVSNGKLAAAVAVPQPDAVALHNGDNADLGASAPPA
Ga0187814_100622011	3300017932	Freshwater Sediment	AAITGGAPLEIPEVPPIPQLPAQVSNGKLAAAAAAPQPDAAARHSDDDR
Ga0187814_100645101	3300017932	Freshwater Sediment	DVAEAEAEITSGAPLEVPEVPPIPQLPIQVSNGKLAAAAMPQPGGAARHSDGDEHPGE
Ga0187814_104304611	3300017932	Freshwater Sediment	AAEAEITGGAPLEIPEVPPIPQLPIQAGNGQVAAAAVLQPDVVAGRGDDDAQPGV
Ga0187801_101781592	3300017933	Freshwater Sediment	GGAPLEIPEVPPIPQLPISESNGKLAAAAVLQPDTVARHSDDDTHSGA
Ga0187809_101945621	3300017937	Freshwater Sediment	APLEIPEVPPIPQLPISESNGKLAAAAVLQPDTVARHSDDDTHSGA
Ga0187808_101740511	3300017942	Freshwater Sediment	AAEAEITSGAPLEIPEVPPIPQLPIQVSNGKLAAAAAVLQPDAAAPHNDDAHPGA
Ga0187808_105083172	3300017942	Freshwater Sediment	FGGEDVAAAEAQITGGVPLEIPEVPPIPQLPIQVSNGKLAAAAVLQPDAVARHSGDDAHPGA
Ga0187817_107086392	3300017955	Freshwater Sediment	ITGGAPLEIPEVPPLPQLPVQAGNGKLAAAAVTQPDAAARHSDDGAH
Ga0187815_100480821	3300018001	Freshwater Sediment	PPIQVSNGNLAAAAVPQPDAVAQHSGDDAHSSAKAPPA
Ga0187885_101350171	3300018025	Peatland	PPIPELPLQVSNGKLAATAAVPQPARHDDDAAESGA
Ga0187857_103361763	3300018026	Peatland	APLEIPEVPPIPELPLQVSNGKLAATAAVPQPARHDDDAAESGA
Ga0187887_104338451	3300018043	Peatland	IESGAPLEIPEVPPIPELPLQVSNGKLAATAAVPQPARHDDDAAESGA
Ga0184585_1353502	3300019189	Soil	EAEVQSGAPLEIPDVPLIPQLPLQASNGKLAAAAAGPVPDPVTRPSDDAADSGA
Ga0193732_10566862	3300020012	Soil	PQIPQLPVQVSNGKVAAAVAVLEPDAVARHNGDDAHSGA
Ga0210407_103891371	3300020579	Soil	PQLPAQVSNGKQTAAVAVLPDAPARHNGDDAHSDA
Ga0210399_103170834	3300020581	Soil	TSGAPLEIPEVPPVPQLPAQVSNGKQTAAVAVLPDAPARHNGDDAHSDA
Ga0210399_106154421	3300020581	Soil	PPIPTLPMQVGNGRLAATAVPQPGAVAGHDDDDADSGA
Ga0210383_102034773	3300021407	Soil	DFGNEDVDKEEAEIQSGAPLQIPEVPPIPTSPMQVGNGKLTAAVVAPHNDDADPGA
Ga0210383_105094532	3300021407	Soil	AEAEIENGAPLEIPEVPPIPELPRHASNGNLAAAAAVPQPATAARHNHDAADPGA
Ga0210383_113802382	3300021407	Soil	EVAPIPQLPIQVSNGKVAAAAMPQPDAAARHSDGDAHPGA
Ga0210384_107272851	3300021432	Soil	AEAEITSGAPLEIPEVPPIPQLPVQVSNGKLVAAGAVLQPDTAARHDDDDAHPGA
Ga0210402_104347691	3300021478	Soil	PIPQLPVQVSNGKLTAAVAVLQPDAVAQHNGDDPHSDV
Ga0210402_105502961	3300021478	Soil	LEIPEVPPIPTPPMQVGNGKLAVAAVARHNNDAADPGA
Ga0210402_107558151	3300021478	Soil	ITSEAPLEIPEVPPIPQLPVQVSNGKQAAAVAVLPDAASGHNGEDAHPDA
Ga0210409_112409351	3300021559	Soil	AEITSGAPLEIPEVPQLPQLPVQVSNGELAAAGAVLQPDAVARHNGGDAHSDV
Ga0247692_10394231	3300024279	Soil	VPQIPVQVSNGKLTAAAAVPQPDAVARRNGDAHSDV
Ga0207692_103047681	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	NEDVEKEEAEITSGALEIPEVPPIPRLPTHASNGKLAAAVPRPDAAAQHNNDTVDSGA
Ga0207685_104658451	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	EIESGAPLEIPQVPPIPTLPTQVGNGKLAAAAVARHNDDDTDPGA
Ga0207684_100571785	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	EIPEVLPIPELPMQASNGKLAAAAAVPQPDASARDNGDAADSGA
Ga0207684_101160633	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	PPLEIPEVPPIPQLPMQASDGQLAAAAAAPEPDAVARHDDTAADSGA
Ga0207693_110877982	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ADFGDEDVAKEEAEIESGAPLQIPEVPPIPTLPTQAGNGKLAAAVARHNDDDADSGA
Ga0207664_101891601	3300025929	Agricultural Soil	LEIPEVPRIPQLPVQVSNGQQTAPVAVLPDAPARHNGDDAHSDA
Ga0207641_109448471	3300026088	Switchgrass Rhizosphere	GAPLEIPQVPPIPTLPTQVGNGKLAAAAVARHNDDDTDPGA
Ga0209621_10115241	3300026864	Forest Soil	EVPQIPVQVGNGKLTAAVAVPQPDAVARRNGDAHSDV
Ga0208827_10223644	3300027641	Peatlands Soil	TSGAPLGIPEVPPIPQLPVQVSNGKLAAAVAVLQPDAVAPHNGDADSGA
Ga0209420_10024686	3300027648	Forest Soil	ESGAPIEIPEVPPIPQLPLQATNGKLATVAAGPPPDAVARPNDDAADSGA
Ga0307313_102166311	3300028715	Soil	SDQVAVTAEAEIPGGAPLAIPEVPPIPQLPVQVSNGKVAAAVAVLEPDAVARHNGDDTHSGA
Ga0307282_104858501	3300028784	Soil	APLEIPQVPPIPTLPTPVGNGKLAAAAMARHNDDDAAPGA
Ga0307296_100758294	3300028819	Soil	EEAEIESGAPLAIPQVPPIPTLPTPVGNGKLAAAAAVPQPDAAARHSDDADSGA
Ga0307296_107745961	3300028819	Soil	LAIPEVPQIPQLPVPASNGKLTAAVAVPQPDAAARRNGDDAHLGV
Ga0170824_1244718451	3300031231	Forest Soil	LEIPEVPPIPQLPVQVSNGKLAAAAAVPQPDPVARHNNDDAHSGA
Ga0170818_1013608751	3300031474	Forest Soil	PIPQLPAQVSNGKLAAAAAVPQPDPVARHNNDDAHSGA
Ga0318516_102017493	3300031543	Soil	VPPIPELPGQASNGKLAAAAVPQPDAAARHNHDAADSGA
Ga0318534_101106541	3300031544	Soil	PLEIPEVPPIPELPGQASNGKLAAAAVPQPDAAARHNHDAADSGA
Ga0307475_110761371	3300031754	Hardwood Forest Soil	EVPPIPQLPVQVSNGKQAAAVAVLPDAASGHNGEDAHPDA
Ga0307473_102156252	3300031820	Hardwood Forest Soil	EIESGAPLEIPQVPPIPTLPTQVGNGKLAAAAVARHNDDDADSGA
Ga0318520_102869901	3300031897	Soil	APLEIPEVPPIPELPGQASNGKLAAAAVPQPDAAARHNHDAADSGA
Ga0318520_106996071	3300031897	Soil	PQLPIQVSNGKLAAAAVAQPDAVARHNDDDADSGAQAPPA
Ga0306921_112765392	3300031912	Soil	PLEVPEVPPIPQLPVQVSNGKPTAAAVPQPDAAARHSDGDAHSGG
Ga0310916_116785271	3300031942	Soil	AEAEAAITGGAPLEVPEVPPIPQLPIQVSNGKPAAAAVPQPGAAARHSDGDAHSGG
Ga0307470_116468511	3300032174	Hardwood Forest Soil	NEDVAKEEAEIESGAPLEIPQVPPIPTLPTQVGNGKLAAAAVARHKDDDADSGA
Ga0307471_1043134412	3300032180	Hardwood Forest Soil	PLEIPEVPPIPQLPVQVSNGKLTAAVAVLQPDAVAQHNGDDPHSDV
Ga0315742_112947133	3300032756	Forest Soil	QSGAPVEIPEVPLIPQLPLQATNGKLAAAAAGPAPDAVARPNDDAADSGA
Ga0315742_119914511	3300032756	Forest Soil	TGAAALEIPEVPPIPQLLVQVGNGKLAAVAAAQPDALARSDDGDADSGAQTPLA
Ga0315742_122726731	3300032756	Forest Soil	AEIDNEAPLEIPEVPAIPQLPIQASNGKLAAATVGPVPDATAQHNDDAAEPGA
Ga0335078_117570431	3300032805	Soil	GAAITSGAPLEVPEVPPIPQLPIQASNGKLAAATAGLQPDAAARHSDDDAHPGA
Ga0335083_104728753	3300032954	Soil	ESGAPLQIPQVPPIPTLPAQVGNGELAAATVARHNDDADPGA
Ga0335076_100666457	3300032955	Soil	TEEAEIESGAPLEIPEVPPIPALPTPAGNGKLAAAAAAVPQPDTAAQPSDDTADPGA
Ga0335084_104819621	3300033004	Soil	AEAEIMGGAPPEISEIPAIPQLPRQISNGKLAAAAVPQPDAMARHSDDDAHSGA