Metagenome / Metatranscriptome Family F069389

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069389
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	89 residues
Representative Sequence	MPNWAEQVTAIATAVSAIGLLSAIGAVIFAGQQAREARIGRQAEMAVEFFRRWSEGPMMETRRLVAQFDTPEALRDALTVFIAEN
Number of Associated Samples	100
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	94.68 %
% of genes near scaffold ends (potentially truncated)	70.16 %
% of genes from short scaffolds (< 2000 bps)	69.35 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (53.226 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.194 % of family members)
Environment Ontology (ENVO)	Unclassified (32.258 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.710 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.49% β-sheet: 0.00% Coil/Unstructured: 34.51%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF02518	HATPase_c	4.03
PF00296	Bac_luciferase	3.23
PF10979	DUF2786	3.23
PF12697	Abhydrolase_6	2.42
PF00478	IMPDH	1.61
PF05726	Pirin_C	1.61
PF01872	RibD_C	1.61
PF03734	YkuD	1.61
PF00313	CSD	0.81
PF00561	Abhydrolase_1	0.81
PF00990	GGDEF	0.81
PF16859	TetR_C_11	0.81
PF06253	MTTB	0.81
PF07883	Cupin_2	0.81
PF11706	zf-CGNR	0.81
PF07730	HisKA_3	0.81
PF00441	Acyl-CoA_dh_1	0.81
PF13340	DUF4096	0.81
PF03061	4HBT	0.81
PF04185	Phosphoesterase	0.81
PF00672	HAMP	0.81
PF03023	MurJ	0.81
PF04978	DUF664	0.81
PF14561	TPR_20	0.81
PF08818	DUF1801	0.81
PF00365	PFK	0.81
PF08281	Sigma70_r4_2	0.81
PF13489	Methyltransf_23	0.81
PF14698	ASL_C2	0.81
PF13561	adh_short_C2	0.81
PF02627	CMD	0.81
PF00106	adh_short	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	3.23
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.61
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.61
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	1.61
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.61
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.61
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.81
COG0205	6-phosphofructokinase	Carbohydrate transport and metabolism [G]	0.81
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG5598	Trimethylamine:corrinoid methyltransferase	Coenzyme transport and metabolism [H]	0.81
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.81
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.81
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.81
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.81
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.81
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.81
COG2244	Membrane protein involved in the export of O-antigen and teichoic acid	Cell wall/membrane/envelope biogenesis [M]	0.81
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.81
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.81
COG0728	Lipid II flippase MurJ/MviN (peptidoglycan biosynthesis)	Cell wall/membrane/envelope biogenesis [M]	0.81
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.81
COG0534	Na+-driven multidrug efflux pump, DinF/NorM/MATE family	Defense mechanisms [V]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.03 %
Unclassified	root	N/A	45.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.03 %
Unclassified	root	N/A	45.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.23 %
Unclassified	root	N/A	45.97 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.81 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	47.58 %
Unclassified	root	N/A	45.97 %
Candidatus Thermoplasmatota	phylum	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota	0.81 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.81 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	46.77 %
Unclassified	root	N/A	45.97 %
Thermoplasmata	class	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata	0.81 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.81 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.97 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	39.52 %
unclassified Thermoplasmata	no rank	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata	0.81 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.81 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.97 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	29.84 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	2.42 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.61 %
Thermoplasmata archaeon	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	0.81 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.81 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.81 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.81 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.97 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	29.84 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2.42 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.61 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	0.81 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.81 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.81 %
Thermoplasmata archaeon	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	0.81 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.97 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	29.84 %
Actinokineospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora	2.42 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.61 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.81 %
Spongiactinospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Spongiactinospora	0.81 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.81 %
Thermoplasmata archaeon	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	0.81 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.97 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	29.84 %
Actinokineospora spheciospongiae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora → Actinokineospora spheciospongiae	2.42 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.61 %
Spongiactinospora gelatinilytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Spongiactinospora → Spongiactinospora gelatinilytica	0.81 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.81 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.81 %
Thermoplasmata archaeon	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	0.81 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2424918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1465	Open in IMG/M
3300002906\|JGI25614J43888_10042415	Not Available	1409	Open in IMG/M
3300005459\|Ga0068867_101472333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	633	Open in IMG/M
3300005543\|Ga0070672_100825884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	816	Open in IMG/M
3300005712\|Ga0070764_11025462	Not Available	521	Open in IMG/M
3300005764\|Ga0066903_100905401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1597	Open in IMG/M
3300006028\|Ga0070717_11811215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300006163\|Ga0070715_10320880	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300006176\|Ga0070765_101882300	Not Available	560	Open in IMG/M
3300006176\|Ga0070765_101894160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300006893\|Ga0073928_10708940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	701	Open in IMG/M
3300009176\|Ga0105242_13116278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300010043\|Ga0126380_10959162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	716	Open in IMG/M
3300010048\|Ga0126373_10015527	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6306	Open in IMG/M
3300010048\|Ga0126373_12489902	Not Available	577	Open in IMG/M
3300010049\|Ga0123356_12797790	Not Available	611	Open in IMG/M
3300010361\|Ga0126378_10570790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1246	Open in IMG/M
3300010361\|Ga0126378_12737718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300010379\|Ga0136449_100659474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1766	Open in IMG/M
3300010379\|Ga0136449_101073257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1285	Open in IMG/M
3300010379\|Ga0136449_104148622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300010399\|Ga0134127_10566133	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1160	Open in IMG/M
3300012181\|Ga0153922_1176849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300012958\|Ga0164299_10592139	Not Available	756	Open in IMG/M
3300012987\|Ga0164307_11068904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Spongiactinospora → Spongiactinospora gelatinilytica	661	Open in IMG/M
3300012988\|Ga0164306_11411673	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300013296\|Ga0157374_11689056	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300013307\|Ga0157372_12751194	Not Available	564	Open in IMG/M
3300013308\|Ga0157375_12814376	Not Available	582	Open in IMG/M
3300014489\|Ga0182018_10138622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1397	Open in IMG/M
3300014968\|Ga0157379_11152357	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300016357\|Ga0182032_11254199	Not Available	639	Open in IMG/M
3300019890\|Ga0193728_1197991	Not Available	845	Open in IMG/M
3300020582\|Ga0210395_10103876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2102	Open in IMG/M
3300020582\|Ga0210395_10698769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	758	Open in IMG/M
3300020583\|Ga0210401_10268267	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300021180\|Ga0210396_11546907	Not Available	544	Open in IMG/M
3300021401\|Ga0210393_10211542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1569	Open in IMG/M
3300021402\|Ga0210385_10044035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2953	Open in IMG/M
3300021403\|Ga0210397_10613821	Not Available	832	Open in IMG/M
3300021403\|Ga0210397_10974892	Not Available	657	Open in IMG/M
3300021404\|Ga0210389_11489055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	515	Open in IMG/M
3300021405\|Ga0210387_10094727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2487	Open in IMG/M
3300021405\|Ga0210387_11700851	Not Available	534	Open in IMG/M
3300021405\|Ga0210387_11860677	Not Available	506	Open in IMG/M
3300021407\|Ga0210383_10607507	Not Available	943	Open in IMG/M
3300021407\|Ga0210383_10992548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	712	Open in IMG/M
3300021420\|Ga0210394_10632714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	940	Open in IMG/M
3300021474\|Ga0210390_10263053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1461	Open in IMG/M
3300021475\|Ga0210392_11310684	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	542	Open in IMG/M
3300021478\|Ga0210402_11818217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300021560\|Ga0126371_10032208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4917	Open in IMG/M
3300021560\|Ga0126371_10867249	Not Available	1047	Open in IMG/M
3300022529\|Ga0242668_1152702	Not Available	509	Open in IMG/M
3300022724\|Ga0242665_10090961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	890	Open in IMG/M
3300024227\|Ga0228598_1100547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300025588\|Ga0208586_1095896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	643	Open in IMG/M
3300025634\|Ga0208589_1025347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1653	Open in IMG/M
3300025935\|Ga0207709_11467863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	565	Open in IMG/M
3300026304\|Ga0209240_1008311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3919	Open in IMG/M
3300027119\|Ga0209522_1007291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1129	Open in IMG/M
3300027567\|Ga0209115_1138028	Not Available	548	Open in IMG/M
3300027855\|Ga0209693_10512177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300027889\|Ga0209380_10082163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1850	Open in IMG/M
3300027908\|Ga0209006_11177588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300027915\|Ga0209069_10927091	Not Available	529	Open in IMG/M
3300028906\|Ga0308309_11209533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	651	Open in IMG/M
3300029999\|Ga0311339_10015441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11672	Open in IMG/M
3300029999\|Ga0311339_10136218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2921	Open in IMG/M
3300030007\|Ga0311338_10812433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora → Actinokineospora spheciospongiae	930	Open in IMG/M
3300030007\|Ga0311338_11065857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	778	Open in IMG/M
3300030056\|Ga0302181_10167406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1039	Open in IMG/M
3300030058\|Ga0302179_10557057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300030524\|Ga0311357_10773077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora → Actinokineospora spheciospongiae	865	Open in IMG/M
3300030580\|Ga0311355_11091402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora → Actinokineospora spheciospongiae	711	Open in IMG/M
3300031234\|Ga0302325_12653536	Not Available	592	Open in IMG/M
3300031708\|Ga0310686_103964580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300031708\|Ga0310686_108518174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1078	Open in IMG/M
3300031708\|Ga0310686_109526457	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	631	Open in IMG/M
3300031708\|Ga0310686_115423499	Not Available	966	Open in IMG/M
3300031708\|Ga0310686_115609946	Not Available	972	Open in IMG/M
3300031713\|Ga0318496_10706393	Not Available	556	Open in IMG/M
3300031715\|Ga0307476_10275421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1232	Open in IMG/M
3300031782\|Ga0318552_10553306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300031823\|Ga0307478_10349764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1217	Open in IMG/M
3300031835\|Ga0318517_10500844	Not Available	547	Open in IMG/M
3300031896\|Ga0318551_10401968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	779	Open in IMG/M
3300032076\|Ga0306924_11960453	Not Available	605	Open in IMG/M
3300032160\|Ga0311301_11333530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	903	Open in IMG/M
3300032174\|Ga0307470_10245553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1179	Open in IMG/M
3300032180\|Ga0307471_102160047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	701	Open in IMG/M
3300032898\|Ga0335072_10524222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1219	Open in IMG/M
3300033134\|Ga0335073_10861954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	961	Open in IMG/M
3300033828\|Ga0334850_053096	Not Available	762	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.71%
Host-Associated	Host-Associated	11.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.06%
Plants	Host-Associated → Plants	9.68%
Aquatic	Environmental → Aquatic	5.65%
Arthropoda	Host-Associated → Arthropoda	0.81%
Fungi	Host-Associated → Fungi	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.58%
Peat	Environmental → Terrestrial → Peat	10.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.23%
Freshwater	Environmental → Aquatic → Freshwater	2.42%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.61%
Sediment	Environmental → Aquatic → Sediment	1.61%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.81%
Mycelium	Host-Associated → Fungi → Mycelium	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.45%
Loam	Environmental → Terrestrial → Soil → Loam	12.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.23%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.42%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.61%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.81%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.23%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.42%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.61%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.61%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.81%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.81%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.19%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	9.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.26%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.03%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.23%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.23%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.42%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.61%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.61%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.61%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.81%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.81%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.81%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.81%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.81%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025588	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300027119	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033828	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P1 1-5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_24249183	3300000033	Soil	MSDWPEQVTAIATAVLAIGAVGAIGAAVFAAQQVREARIGREAEVASEFFRRWSDDSMVXTRRLVATFATPDALRD
ICChiseqgaiiFebDRAFT_112694352	3300000363	Soil	MPNWAEQVTAIATVVLAVGVFGAIAAAVVAGQQVREARIGRQTEIASDFFQRWNDDAMIETRRLV
JGI25614J43888_100424152	3300002906	Grasslands Soil	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGQQARESRIGRQAVTAVDFFRRWNEGPLVETRHLVAQFKTPEALRDALTRFIAENSATSSNSARSRNTAASTLS*
Ga0062389_1025954662	3300004092	Bog Forest Soil	MTVVAGPDWAEQVTAIATAVSALGLLSAIGAVVFAGQQAREARTSRQAEMAAEFFRRWSEAPMVETR
Ga0068867_1014723332	3300005459	Miscanthus Rhizosphere	MDWPEQVTAIATAVLAIGAVGAIGAAVFAAQQVREARIGREAEVASEFFRRWSDDPMVETRRLVASYRSPEALRDALVRHTAAND
Ga0070679_1016948972	3300005530	Corn Rhizosphere	MPNWAEQVTAIATAIGAIGLISAIGAAIFAGQQVREARIGRQAEMAGDFIRRWNEAPLVETRRFVGQYE
Ga0070672_1008258842	3300005543	Miscanthus Rhizosphere	MDWPEQVTAIATAVLAIGAVGAIGAAVFAAQQVREARIGREAEVASEFFRRWSDDPMVETRRLVASYRSPEALRDAL
Ga0070763_104126381	3300005610	Soil	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGQQAREARIGRQAEMAVDFFRRWNEGPMVETRRLVA
Ga0068856_1012148801	3300005614	Corn Rhizosphere	MPNWAEQVTAIATAIGAIGLISAIGAAIFAGQQVREARIGRQAEMAGDFIRRWNEAPLVE
Ga0070764_110254621	3300005712	Soil	MPNWAEQVTAIATAVSSLALLSAIGAVIFAARQARETRIGRQAETAVEFFRRWNESSLEETRRLVAQFETNEALRD
Ga0066903_1009054011	3300005764	Tropical Forest Soil	MGATDPNWAEQVTAIATALGAIGLLSAIGAVIFASQQVREARDTRQAQLAADFLRRWDEDALVATRRLVATFDTPQALRIAFESYRATNA
Ga0070717_118112151	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	AIATAVSAIGLIGAIGAVVFAARQAREARIGRQAATAVEFFRRWNEDPLVETRRLVAQFETPEALRDTLARFIAENSVNAYVL*
Ga0075017_1014133202	3300006059	Watersheds	VPNWAEDVTAIATAVSAVGLLSAIGAAIYAGQQVREARIGRQAEMAAEFFRRWNEGPLEETRRLVDQYD
Ga0070715_103208801	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MPNWAEQVTAVATAVSALGLLSAIGAVIFAGQQAREARIGRQATTAVDFFRRWNEGPLVETRRLIARFGTPEVLRDAMTRFIAEDSEQA
Ga0070765_1018823001	3300006176	Soil	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGQQAREARIGRQAATAVEFFRGWNEAPLVETRRLVAQFPTGQALRDAMTRFIAENSVQAYVLYRELDYFEQ
Ga0070765_1018941601	3300006176	Soil	MPNWAEQVTAIATAVSAIGLLSAIGAVIFAGQQAREARIGRQAAVAVEFFRRWDEGPLVETRRLVAQFETAEALRDAMLGFIAENSAQA
Ga0073928_107089401	3300006893	Iron-Sulfur Acid Spring	MPNWAEQVTAIATAVSAVGLLSAIGAVIFAGQQAREARIGRQAEMAVEFFRRWSEGPMLETRRLVAEFETPEALRDAMVLFIAENSADAFVLYRELD
Ga0105242_131162782	3300009176	Miscanthus Rhizosphere	MPSWAEQVTAIATVVLAIGAVGAIGAAIFAGQQVREARIGRQAEVAADFFRRWSDDDMVETRRLVASYASPDALRDALLRHVAANDTEAYVLFRELDYFEQLGAMEQHGGFDFELVRLLLGHRLI
Ga0126380_109591622	3300010043	Tropical Forest Soil	MPNWAEQLTGIATAVSALGLLSAIGAVIFASRQAREARIGREASTAVEFFRRWNEAPLVEARRLVAQFRTAEALRDAMTRFIAENSVQAYVLYRELDFFEQLGALEKHG
Ga0126373_100155277	3300010048	Tropical Forest Soil	MPNWAEQVTAIATAVSALGLLSAIGAAIFAGQQAREARIGRQAEIAVDFFRRWNEDPKVETRRLVAEFETPEALRDAMMRFVAENSADA*
Ga0126373_124899021	3300010048	Tropical Forest Soil	VPNWAEQVTAIATAVSAIGLLSAIGAVIFAGQQAREARIGRQAEMAVAFFQRWNEEPMVEARRLVAEFETPEAL
Ga0123356_127977901	3300010049	Termite Gut	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGRQAREARIGREAATAVEFFRRWDEAPLVETRHLIAQFQTPEALRDAMMRFISENSVQ
Ga0126370_117161731	3300010358	Tropical Forest Soil	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGRQAREARIGREAATAVEFFRRWNEAPLVETRRLIAQFQTAE
Ga0126372_128888942	3300010360	Tropical Forest Soil	MLAVDPNWAEQVTAIATAAGAIGLLGAIGAAVFAGQQVREARQTRQAQMAADLVRRWSEPELVETR
Ga0126378_105707902	3300010361	Tropical Forest Soil	EQLTAIATAVSAVGLLGALGAVVFAARQAREARIGRQAATALEFFRRWNEEPLVETRRLVAQFETPDALRDAMTRFIAENSVNAYVLYRELDFFEQLGALEKHGGFDFDLIRTLLGRRLIDRWECGGRQST*
Ga0126378_127377182	3300010361	Tropical Forest Soil	MPNWAEEVTAIATAVGALGLVSAFGAVVFAGQQAREARIGSQAEMAVDFFRRWNEEPMVEARRLVAEFQTPEALREAMTRFVAQNSAEAYVLYRELDYFEQ
Ga0136449_1006594741	3300010379	Peatlands Soil	MEGSLMPNWAEQVTAIATAVSAIGLLSAIGAVIFAGQQTREARIGRQAETAVEFFRRWDDPPLVETRRLVAQLEPKNALRDAMVQYVRDNSEEAYVL
Ga0136449_1010732572	3300010379	Peatlands Soil	MMSLHIRRTHTTEEGTVPNWAEDVTAIATAVSAVGLLSAIGAAIYAGQQVREARIGRQAEMAAEFFRRWNEGPLEETRRLVDQYDTSEALRNALEQLIAEHSVDAYVLLRELDYFEQLGALEQ
Ga0136449_1041486221	3300010379	Peatlands Soil	LPNWAEQVTAIVTAVSAIGLIGAIGAVVFAARQAREARIGRQAATAVEFFRRWDEDPLVETRRLVAQFGTPEALRDAMARYIGENSVNAYILYRELDFFEQLGALAE
Ga0134127_105661331	3300010399	Terrestrial Soil	MPNWAEQVTAIATAIGCIGLLSAVGAAIFAGRQVQEARIGRQAEIAADFFRRWSEPDLVETRRLVARYQSQQALRDAFVEAVAANNANAWIMYRELD
Ga0126350_111474082	3300010880	Boreal Forest Soil	MPNWAEQVTAIATAVSAIGLLSAIGAVIFGGQQAREARIGRQAEMAVEFFRRWSEGPMMETRRLVAQFETP
Ga0153922_11768491	3300012181	Attine Ant Fungus Gardens	MPNWAEQVTAIATAVSALALFGAIGAVIFAAKQARETRIGRQAETAIEFFRRWNEAPLEETRRLVAGFETGEALRDAMVGFVAENSVEAYVLYRELDYFEQLGALEKH
Ga0164299_105921391	3300012958	Soil	MPNWAEQVTAIATAIGAIGLLSAIGAAIYAGRQVEEARIGREAEIAIDFFRRWSDGDMVETRRLVASYDTPDALRAAFVRHEAANDIEAYVM
Ga0164307_110689042	3300012987	Soil	MPNWAEQVTAIATAIGAIGLISAIGAAIFAGQQVREARIGRQAEMAGDFIRRWNEAPLVETRRFVGQYDSSEALRDAFVGFIAENSVHAYVLYRELD
Ga0164306_114116731	3300012988	Soil	MPNWAEQVTAIATAIGAIGLISAIGAAIFAGQQVRKARIGRQAEMAGDFIRRWNETPLVETRRFVGQYASSEALRDAFVGFIAENSVHAY
Ga0157374_116890562	3300013296	Miscanthus Rhizosphere	MTTWAEQVTAIATAVIAGGTLSAIGAAIFAGRQVVEARIGRQAEIAAAFFHRWNDADLVETRRLVASFSTPVSLRDAFVRHMAANDMEAYVMLR
Ga0157372_127511942	3300013307	Corn Rhizosphere	MPNWAEQVTAVATAIGAIGLISAIGAAIFAGQQVREARIGRQAEMAGDFIRRWNEAPLVETRRFVAQYESNEALRDA
Ga0157375_128143762	3300013308	Miscanthus Rhizosphere	MPNWAEQVTAVATAIGAIGLISAIGAAIFAGQQVREARIGRQAEMAGDFIRRWNEAPLVETRRFVAQYESNEALRDAFVGFIAENSVH
Ga0182018_101386221	3300014489	Palsa	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGQQAREARIGRQAEMAVEFFRRWNEDPLVETRRLVAQFETGEALRDAMTRFIAENSAEAYVLYRELDYFEQLGALEKHGGFDFEL
Ga0182024_128429802	3300014501	Permafrost	MHKGGAVPNWAEEVTAIATAVSAVGLLSAIGAAIYAGQQVREARIGRQAEMAAEFFRRWNEAPLEETRRLVDQ
Ga0157379_111523571	3300014968	Switchgrass Rhizosphere	MTTWAEQVTAIATAVIAVGTLSAIGAAIFAGRQVVEARIGRQAEIAAAFFHRWNDADLVETRRLVASFSTPVSLRDAFVRHMAANDMEAYVMLRELDYFEQLGALEEHGGFSFDIIRSLLGRRLV
Ga0132257_1038576912	3300015373	Arabidopsis Rhizosphere	VSDPNWAEIVTALATAIGAIGLLSAIGAAIYAGRQVREAERGRKASMAAEFLRRWDEDHLVET
Ga0182032_112541992	3300016357	Soil	MPNWAEQVTAIATAIGAIGLVSAIGAAIFAGRQVQEARTGRQAEIAADFFRRWSEDDMVATRRLVASYDTPEALRNAFVRHMDANDTEAYIMLREL
Ga0187807_10209773	3300017926	Freshwater Sediment	MPNWAEQLTAIATAVSAIGLIGAIGAVVFAARQAREARIGRQAATAVEFFRRWNEDALVETRRLVAQFE
Ga0187806_11700541	3300017928	Freshwater Sediment	MPNWAEQVTAIATAVGAIGLVSAIGAVVFAGQQAREARVGRQAETAVEFFRRWSEAPLVETRRL
Ga0193728_11979912	3300019890	Soil	MPNWAEQVTAIATAVLAVGAVGAIGAAIVAGQQVREARIGRQAEVASNFFERWSAYPMVETRRLVAAYGSPEALRDALLRH
Ga0210395_101038761	3300020582	Soil	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGQQAREARINRQAEMAAEFFRRWSESPMVETRRLVAQFDTPEALRDAMMRFIAENSAEAYVLYRELDYFEQLGALEKHGGF
Ga0210395_106987691	3300020582	Soil	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGQQAREARINRQAEMAAEFFRRWSESPMVETRRLVAQFETPEALRDAMMRFIAENSAEAYVLYRELDYFEQLGALEKHGGF
Ga0210401_102682673	3300020583	Soil	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGQQAREARINRQAEMAAEFFRRWSESPMVETRRLVAQFETPEALRDAMMRFIAENSAEAYVLYR
Ga0210396_115469071	3300021180	Soil	MPNWAEQVTAIATAVSAVGLLSAIGAVIFAGQQAREARIGRQAEMAVEFFRRWSEGPMLETRRLVAEFETPEALRDAMTLFIAENSPDA
Ga0210393_102115422	3300021401	Soil	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGQQAREARINRQAEMAAEFFRRWSESPMVETRRLVAQFETPEELRDAM
Ga0210385_100440355	3300021402	Soil	MPNWAEQVTAIATAVSALGLLSAIGAVVFAGQQAREARSGRQAATAVDFIRRWNEAPLVETRHLVAQLQTPQALAD
Ga0210397_106138212	3300021403	Soil	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGQQAREARIGRQAEMAVDFFRRWNEGPMVEARRLVAEYETGEALRDAMLVFIAENSA
Ga0210397_107953791	3300021403	Soil	MPDWAEQVTAIATAVNAIGILSAIALVVYAAQQAREARVGRQAETAIEFFRRWSEGPMLETRRLVAEFD
Ga0210397_109748922	3300021403	Soil	MPNWAEQVTAVATAVSALGLLSAIGAVIFAGQQAREARIGRQATTAVDFFRRWNESPLVETRRLIARFGTPEALRDAMTRFIAEDSEQAYVLFRELD
Ga0210389_114890552	3300021404	Soil	MPDWAEQVTAIATAVNAIGILSAIALVVYAAQQAREARVGRQAETAIEFFRRWSEGPMLETRRLVAEFDTPEALRDALLVFVAEN
Ga0210387_100947271	3300021405	Soil	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGQQAREARINRQAEMAAEFFRRWSESPMVETRRLVAQFETPEALRDAMMRFIAENSAEAYVLYREL
Ga0210387_105183372	3300021405	Soil	MPNWAEQVTAIATAVSAIGLLSAIGAVIFAGQQAREARIGRQAEMAVEFFRRWSEGPMMETRRLVAQFDTP
Ga0210387_117008511	3300021405	Soil	MPNWAEQVTAIATAVGAIGLVSAIGAVIFAGRQAREARIGRQAEMAVEFFRRWSEGPMLETRRLVAQFETGEA
Ga0210387_118606772	3300021405	Soil	MPNWAEQVTAIATAVSSLALLSAIGAVIFAARQARETRIGRQAETAVEFFRRWNESSLEETRRLVAQFETPEALRD
Ga0210383_106075072	3300021407	Soil	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGQQAREARIGRQAATAVEFFRGWNEAPLVETRRLVAQFPTGQALRDAMM
Ga0210383_109925482	3300021407	Soil	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGQQAREARINRQAEMAAEFFRRWSESPMVETRRLVAQFETPEALRDAMMRFIAENSAEAYVLYRELDYFEQLG
Ga0210383_117930202	3300021407	Soil	MPNWAEQVTAIATAVSAIGLLSAIGAVIFAGQQAREARVGRQAEMAVEFFRRWSEGPMVETRRLVAE
Ga0210394_106327142	3300021420	Soil	MPNWAEQVTAIATAVSAIGLLSAIGAVIFAGQQAREARIGRQAEMAVEFFRRWNEGPMVETRRLVAEFETPEALRDAMTIFIAENSADAYVLYRELDYFEQLGALEKHGGFDFELIRTLL
Ga0210391_110805581	3300021433	Soil	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGQQAREARIGRQAATAVEFFRGWNEAPLVETRR
Ga0210390_102630533	3300021474	Soil	VGFGAIDRKAALMPNWAEQVTAIATAVSALGLLSAIGAVIFAGQQAREARINRQAEMAAEFFRRWSESPMVETRRLVAQFETPEALRDAMMRFIAENSAEAYVLYRELDYFEQLGALEKHGGF
Ga0210392_113106841	3300021475	Soil	MPNWAEQVTAIATAVSAIGLLSAIGAVIFAGQQAREARIGRQAVMAVEFFRRWSEGPMVETRRLVAEFETPEALRDAMTLFIAE
Ga0210398_105826362	3300021477	Soil	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGQQAREARINRQAEMAAEFFRRWSESPMVETRRLVAQFD
Ga0210402_118182171	3300021478	Soil	MPNWAEQVTAIATAVSAIGLLSAIGAVIFAGQQAREARIGRQAEMAVEFFRRWSEGPMLETRRLVAQFETPEALRDALTVFVAENSAEAYILYRELDYFEQLGALE
Ga0126371_100322081	3300021560	Tropical Forest Soil	MPNWAEQVTAIATAVSAGALLIAIGAVIFAGRQAREARIGRQAETAVDFFRRWNEPEMVETRRLIAEFGTPEELRDAMTRLVAENARDAY
Ga0126371_108672493	3300021560	Tropical Forest Soil	MPNWAEQVTAVATAVSALGLLSAIGAVIFAGRQAREARIGREAATAVEFFRRWNEGPLVETRRLVAQFQTAEALRDAMTRFIGENSVQAYVLYRE
Ga0242668_11527022	3300022529	Soil	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGQQAREARIGRQAATAVEFFRGWNEAPLVETRRLVAQFQTAQALRDAMTRFIAENSV
Ga0242665_100909613	3300022724	Soil	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGQQAREARINRQAEMAAEFFRRWSESPMVETRRLVAQF
Ga0228598_11005472	3300024227	Rhizosphere	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGQQAREARINRQAEMAAEFFRRWSESPMVETRRLVAQFETPEALRDAMMRFIAENSAEAYVLYRELDYFEQLGALEKHGGFDFELIRTLL
Ga0209171_105770821	3300025320	Iron-Sulfur Acid Spring	MPNWAEQVTAIATAVSAVGLLSAIGAVIFAGQQAREARIGRQAEMAVEFFRRWSEGPMLETRRLVAEFE
Ga0208586_10068831	3300025588	Arctic Peat Soil	MPNWAEQVTAIATAVSAIGLLSAIGAVIFAGQQAREARIGRQAEMAVEFFRRWSEGPMMETRRLVA
Ga0208586_10958962	3300025588	Arctic Peat Soil	MPDWAEQVTAIATAVNAIGILSAIALVVYAAQQAREARVGRQAEMAIEFFRRWSEGPMLETRRLVAEFETPEALRDALIVFVAENSAESYVLYRELDYFEQLGALEQHGG
Ga0208589_10253471	3300025634	Arctic Peat Soil	MPNWAEQVTAIATAVSAIGLLSAIGAVIFAGQQAREARIGRQAEMAVEFFRRWSEGPMMETRRLVTQFETPEALRDALTVF
Ga0207709_114678631	3300025935	Miscanthus Rhizosphere	MDWPEQVTAIATAVLAIGAVGAIGAAVFAAQQVREARIGREAEVASEFFRRWSDDPMVETRRLVASYRSPEALRDALVRH
Ga0207702_120737852	3300026078	Corn Rhizosphere	MPNWAEQVTAIATAIGAIGLISAIGAAIFAGQQVREARIGRQAEMAGDFIRRWNEAPLVETR
Ga0209240_10083116	3300026304	Grasslands Soil	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGQQARESRIGRQAVTAVDFFRRWNEGPLVETRHLVAQFKTPEALRDALTRFIAENSATSSNSARSRNTAASTLS
Ga0209522_10072912	3300027119	Forest Soil	MPDWAEQVTAIATAVNTIGLLSAIALVIFASQQAREARVGRQAQMAIEFFRRWDEAPMVESRRLVAEYGTPEELRDALIVFVAENSAEAYVLYRELDYFEQLGALERH
Ga0209218_11261342	3300027505	Forest Soil	MPNWAEQVTAIATAVSAIGLLSAIGAVIFAGQQAREARIGRQAAVAVEFFRRWDEGPLVETRRLVAQFE
Ga0209115_11380281	3300027567	Forest Soil	MPNWAEQVTAIATAVSSLALLSAIGAVIFAARQARETRIGRQAETAVEFFRRWNESSLEETRRLVAQFETNEALRDAMVRFIGENSQSAYV
Ga0209693_105121772	3300027855	Soil	MPNWAEQVTAIATAVGALGLVSAIGAVIFAGQQAREARIGRQAEMAVDFFRRWNEDPMVETRRLVAEFETPEALRDAMS
Ga0209380_100821632	3300027889	Soil	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGQQAREARIGRQAATAVEFFRGWNEAPLVETRRLVAQFQTAQALRDAMTRFIAENSVQAYVLYRELDYFEQLGALEKHG
Ga0209006_103025531	3300027908	Forest Soil	MPNWAEQVTAIATAVSAIGLLSAIGAVIFAGQQAREARIGRQAEMAVEFFRRWSEGPMMETR
Ga0209006_111775881	3300027908	Forest Soil	MPNWAEQVTAIATAVSAIGLLSAIGAVIFAGQQAREARIGRQAVMAVEFFRRWSEGPMVETRRLVAEFETPEALRDAMTLFIAENSADAYVLYRELDYFEQLGALEKHGGFDFELIRTLLGRRLIDRGD
Ga0209069_109270912	3300027915	Watersheds	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGQQAREARIGRQAATAVEFFRGWNEAPLVETRRLVAQFPTAQALRDALTRFIAENSVQAYVLYR
Ga0308309_112095332	3300028906	Soil	MPNWAEQVTAIATAVSAIGLLSAIGAVIFAGQQAREARIGRQAEMAVEFFRRWSEGPMMETRRLVAQFDTPEALRDALTVFIAEN
Ga0311339_100154415	3300029999	Palsa	VPNWAEQVTAIATAVSSLALLSAIGAVMFAARQARETRIGRQAETAVEFFRRWNESSLEETRRLVAQYETNEALRDAMVRFIAESSERAYVLY
Ga0311339_101362184	3300029999	Palsa	MPNWAEQVTAIATAVSSLALLSAIGAVIFAARQARETRIGRQAETAVEFFRRWNESSLEEARRLVTQFETPEALRDAMVRFIAENSERAYVLYR
Ga0311338_108124331	3300030007	Palsa	VPNWAEQVTAIATAVSSLALLSAIGAVMFAARQARETRIGRQAETAVEFFRRWNESSLEETRRLVAQYETNEAL
Ga0311338_110658571	3300030007	Palsa	MPNWTDQVTAIATAVSALALLSAIGAVIFAARQARETRIGRQAETAVEFFRRWNESSLEETRRLVAQFETNEALRDAMVRFIAENSQSAYVLYRELDYFEQLGALEKHGGFDFELIRSLLAQ
Ga0302181_101674062	3300030056	Palsa	MPSWTDQVTAIATAVSALALLSAIGAVIFAARQARETRIGRQAETAVEFFRRWNESSLEETRRLVAQFETNEALRDAMVRFIAENSQSAYVLYRELDYFEQLGALEKHGGFDFELIRSLLGQ
Ga0302179_105570571	3300030058	Palsa	MPNWAEQVTAIATAVSAIGLLSAIGAVIFAAQQAREARIGRQAEMAVEFFRRWNEGPLVETRRLVAEFETGEALRDAMMVFIAENSAGAYVL
Ga0311357_107730771	3300030524	Palsa	VPNWAEQVTAIATAVSSLALLSAIGAVMFAARQARETRIGRQAETAVEFFRRWNESSLEETRRLVAQYETNEALRDAMVRFMAESSERAYVLY
Ga0311355_110914022	3300030580	Palsa	VPNWAEQVTAIATAVSSLALLSAIGAVMFAARQARETRIGRQAETAVEFFRRWNESSLEETRRLVAQYETNEALRDAMVRFMAESSERAYV
Ga0311354_103704951	3300030618	Palsa	MPNWAEQVTAIATAVSAIGLLSAIGAVIFAAQQAREARIGRQAEMAVEFFRRWNEGPLVETRRLVAEFETGE
Ga0302180_105407872	3300031028	Palsa	MPNWAEQVTAIATAVSSLALLSAIGAVIFAARQARETRIGRQAETAVEFFRRWNESSLEE
Ga0302325_105610522	3300031234	Palsa	VTAVAGPNWAEQVTAVATAVSALGLLSAIGAVIFAGQQAREARTSRQAEMAAEFFRRWSEAPMSSRHG
Ga0302325_126535362	3300031234	Palsa	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGQQAREARINRQAEMAAEFFRRWSDSPMVETRRLVAQFETPEALRDAMMRFIAENSAEAYV
Ga0310686_1039645801	3300031708	Soil	MPNWAEQVTAIATAVSAIGLLSAIGAVIFAGQQAREARVGRQAEMAVEFFRRWSEGPMVETRRLVAEFETPEALRDAMTRFIAEDSVQAYVLYRELDYFEQLGALEMHG
Ga0310686_1085181741	3300031708	Soil	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGQQAREARINRQAEMAAEFFRRWSESPMVETRRLVAQFDTPEALRDAMVRFIAENSAEAYVLYRELDYFEQLGALEKHGGFD
Ga0310686_1095264571	3300031708	Soil	MPNWAEQVTAIATAVSAIGLLSAIGAVIFAGQQAREARIGRQAAVAVEFFRRWDEGPLVETRRLVAQFETAEALRDAM
Ga0310686_1154234992	3300031708	Soil	VPDWAEQVTAIATAVSALALLSAIGAVIFAARQARETRIGRQAETAVEFFRRWNEPSLEETRRLVAQFETNEALRDAMVRFIAENSQSAYVLYRELDYFEQ
Ga0310686_1156099461	3300031708	Soil	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGQQAREARVGRQAETVVEFIIRWNDGPLEETRHLVAQFETPEELRDAMTRFIAENSIQAFILYRELDYFEQLGALVEHGGADFGLIRTLLGHRL
Ga0318496_107063932	3300031713	Soil	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGRQAREARIGREAATAVEFFRRWNEAPLVETRRLVAQFQTADALRDAMTRFIAENSVQAYVLYR
Ga0307476_102754211	3300031715	Hardwood Forest Soil	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGQQAREARIGRQAATAVEFFQGWNEAPLVETRRLVAQFQTPQALRDAMMRFIAENS
Ga0318552_105533062	3300031782	Soil	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGRQAREARIGREAATAVEFFRRWNEAPLVETRRLVAQFQTADALRDAMTRFIAENSVQAYVLYRELDYFEQLGALEKHGGFDFELI
Ga0307478_103497642	3300031823	Hardwood Forest Soil	MPNWAEQVTAIATAVSAIGLLSAIGAVIFAGQQAREARIGRQAEMAVEFFRRWSEGPMMETRRLVAQFDTPEALRDALTVF
Ga0318517_105008441	3300031835	Soil	MPNWAEQLTAIATAVSAIGLLSAIGAAIFAGQQVREARIGRLADAAVDFIRRWSEDPMVETRRLVAGFKTPEALRDEFVRFVAE
Ga0318527_104891892	3300031859	Soil	MPNWAEQVTAIATAIGAIGLVSAIGAAVFAGRQVEEARIGRQAEIATDFFRRWNDEDMVETRRLVATY
Ga0318551_104019682	3300031896	Soil	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGRQAREARIGREAATAVEFFRRWNEAPLVETRRLVAQFQTADALRDAMTRFIAENSVQAYVLYRELDYFEQLGALEKHGGFDFELIKT
Ga0310902_108446941	3300032012	Soil	MDWPEQVTAIATAVLAIGAVGAIGAAVFAAQQVREARIGREAEVASEFFRRWSDDPMVETRRLVASYRS
Ga0306924_119604532	3300032076	Soil	MPNWAEQVTAIATAVSACALFGAIGAVIFAARQARETRIGREAATAVEFFRRWNEGSLEETRQLVAQFETGEALRDALVQFVAENSDKAFVLY
Ga0311301_113335302	3300032160	Peatlands Soil	VPNWAEDVTAIATAVSAVGLLSAIGAAIYAGQQVREARIGRQAEMAAEFFRRWNEGPLEETRRLVDQYDTSEALRNALEQLIAEHSVDAYVLLRELDYFEQLGALEQ
Ga0307470_102455532	3300032174	Hardwood Forest Soil	MPNWAEQVTAIATAVSSLALLGAIGAVVFAARQARETRIGRQAEAAGDFFRRWNEGPLEETRQLVARFDGAEALRDALVQYIAENSDKAFVLYRELDYFEQLGALEKHGGFDFGLIR
Ga0307471_1021600471	3300032180	Hardwood Forest Soil	MPNWAEQVTAIATAVSSLALLGAIGAVVFAARQARETRIGRQAEAAGDFFRRWNEEPLEETRQLVARFDNAEALRDALVQYIAENSDKAFVLYRELDYFEQLGALEKHGGF
Ga0306920_1005847143	3300032261	Soil	MPNWAEQVTAIATAVSALALLGAIGAVVFAARQARETRMGRQATTAVEFFRRWNEGPLEETR
Ga0306920_1024837751	3300032261	Soil	MPNWAEQVTAMATAVSALGLLSAIGAVIFAGRQAREARIGREAATAVEFFRRWNEAPLVETRRLVAQ
Ga0335072_105242223	3300032898	Soil	MPNWAEQVTAIATAVSALGLLSAIGAVIFAGQQAREARINRQAEMAAEFFRRWSDGPMVETRRLVAQFKTPEALRDAMTRFI
Ga0335073_108619543	3300033134	Soil	MPNWAEQVTAIATAVSAIGLIGAIGAVVLAGRQAREARIGRQAATAVEFFRRWDEKPLVETRRLVTQFETPEALSDAMARYIAENS
Ga0334850_053096_507_761	3300033828	Soil	MPNWAEQVTAIATAVSALGLLSAIGAVVFAGRQAREARIGREAATAVEFFRRWSEAPLVETRRMVAQFETPEALCDALTRFIAEN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069389

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences