NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F069376

Metagenome / Metatranscriptome Family F069376

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F069376
Family Type Metagenome / Metatranscriptome
Number of Sequences 124
Average Sequence Length 81 residues
Representative Sequence DPAAMARTWAAIIGIEPPVATADGAVLAFGRRTVRFVPARGGRTGIVAVDVHATDREHGPGQQGMLCHTMISFI
Number of Associated Samples 112
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 15.91 %
% of genes near scaffold ends (potentially truncated) 29.03 %
% of genes from short scaffolds (< 2000 bps) 29.03 %
Associated GOLD sequencing projects 108
AlphaFold2 3D model prediction Yes
3D model pTM-score0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (71.774 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(18.548 % of family members)
Environment Ontology (ENVO) Unclassified
(27.419 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(36.290 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 14.71%    β-sheet: 28.43%    Coil/Unstructured: 56.86%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.59
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF04672Methyltransf_19 39.52
PF06966DUF1295 7.26
PF13556HTH_30 6.45
PF00106adh_short 3.23
PF03795YCII 3.23
PF00730HhH-GPD 2.42
PF00378ECH_1 2.42
PF00501AMP-binding 1.61
PF01145Band_7 1.61
PF08240ADH_N 0.81
PF00218IGPS 0.81
PF11706zf-CGNR 0.81
PF11716MDMPI_N 0.81
PF12762DDE_Tnp_IS1595 0.81
PF13358DDE_3 0.81
PF12706Lactamase_B_2 0.81
PF01243Putative_PNPOx 0.81
PF01636APH 0.81
PF00899ThiF 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG2020Protein-S-isoprenylcysteine O-methyltransferase Ste14Posttranslational modification, protein turnover, chaperones [O] 7.26
COG3752Steroid 5-alpha reductase family enzymeGeneral function prediction only [R] 7.26
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 3.23
COG01223-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylaseReplication, recombination and repair [L] 2.42
COG0177Endonuclease IIIReplication, recombination and repair [L] 2.42
COG1059Thermostable 8-oxoguanine DNA glycosylaseReplication, recombination and repair [L] 2.42
COG1194Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairsReplication, recombination and repair [L] 2.42
COG22313-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamilyReplication, recombination and repair [L] 2.42
COG0134Indole-3-glycerol phosphate synthaseAmino acid transport and metabolism [E] 0.81


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A71.77 %
All OrganismsrootAll Organisms28.23 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2189573004|GZGWRS402GT1O5Not Available535Open in IMG/M
3300005439|Ga0070711_100517664All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia985Open in IMG/M
3300005454|Ga0066687_10612256All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium647Open in IMG/M
3300005458|Ga0070681_11318600All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia645Open in IMG/M
3300005545|Ga0070695_100220293All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1367Open in IMG/M
3300005610|Ga0070763_10524832All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia680Open in IMG/M
3300005614|Ga0068856_102206626All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium559Open in IMG/M
3300006173|Ga0070716_100972303All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia669Open in IMG/M
3300006173|Ga0070716_101336558Not Available580Open in IMG/M
3300006175|Ga0070712_101772929All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia540Open in IMG/M
3300006755|Ga0079222_10005551All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4192Open in IMG/M
3300006804|Ga0079221_10711570All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300006881|Ga0068865_100258117All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1378Open in IMG/M
3300006903|Ga0075426_10825798All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300009093|Ga0105240_10254551All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2029Open in IMG/M
3300009545|Ga0105237_11959862All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia594Open in IMG/M
3300010371|Ga0134125_10941970All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria948Open in IMG/M
3300010373|Ga0134128_10736569All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1094Open in IMG/M
3300010379|Ga0136449_100242641All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3358Open in IMG/M
3300010400|Ga0134122_10074508All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2644Open in IMG/M
3300012211|Ga0137377_10086335All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium2960Open in IMG/M
3300013104|Ga0157370_11432727Not Available621Open in IMG/M
3300014326|Ga0157380_11716873All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia686Open in IMG/M
3300014745|Ga0157377_10004133All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6633Open in IMG/M
3300016422|Ga0182039_11457542All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → environmental samples → uncultured Blastococcus sp.623Open in IMG/M
3300018060|Ga0187765_11327303Not Available510Open in IMG/M
3300020070|Ga0206356_11018071All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1297Open in IMG/M
3300021374|Ga0213881_10503869Not Available549Open in IMG/M
3300025898|Ga0207692_10049489All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microtetraspora2121Open in IMG/M
3300025914|Ga0207671_11017027All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium653Open in IMG/M
3300025928|Ga0207700_10523776All Organisms → cellular organisms → Bacteria1050Open in IMG/M
3300025928|Ga0207700_11624290Not Available571Open in IMG/M
3300027725|Ga0209178_1198155Not Available710Open in IMG/M
3300028787|Ga0307323_10054033All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1417Open in IMG/M
3300031549|Ga0318571_10110909All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → environmental samples → uncultured Blastococcus sp.909Open in IMG/M
3300031640|Ga0318555_10347028All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → environmental samples → uncultured Blastococcus sp.804Open in IMG/M
3300031740|Ga0307468_101549895All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia616Open in IMG/M
3300031777|Ga0318543_10097606All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1260Open in IMG/M
3300031797|Ga0318550_10287471All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → environmental samples → uncultured Blastococcus sp.798Open in IMG/M
3300031819|Ga0318568_10480102All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia775Open in IMG/M
3300031946|Ga0310910_10702746All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → environmental samples → uncultured Blastococcus sp.799Open in IMG/M
3300032064|Ga0318510_10508830Not Available522Open in IMG/M
3300032160|Ga0311301_10135047All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces4555Open in IMG/M
3300032770|Ga0335085_10641564Not Available1189Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil18.55%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere13.71%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil7.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.84%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.84%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment4.03%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.23%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.23%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.42%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.42%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa2.42%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.42%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.42%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.61%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.61%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.61%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.61%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.61%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.61%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.81%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.81%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.81%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.81%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.81%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.81%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.81%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock0.81%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.81%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2189573004Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)EnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005950Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014838Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017924Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5EnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300018001Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5EnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021374Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08EnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025464Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027080Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)EnvironmentalOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027991Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK24EnvironmentalOpen in IMG/M
3300028146Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028876Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140EnvironmentalOpen in IMG/M
3300028879Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3EnvironmentalOpen in IMG/M
3300030013Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3EnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031777Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24EnvironmentalOpen in IMG/M
3300031778Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24EnvironmentalOpen in IMG/M
3300031792Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23EnvironmentalOpen in IMG/M
3300031797Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032054Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23EnvironmentalOpen in IMG/M
3300032064Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17EnvironmentalOpen in IMG/M
3300032089Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300032895Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FG2_095450402189573004Grass SoilLLELDAFLPRDGWFWDDLPEAQAARAARTTKADDILAVDVAVGDPGDPVAMAQTWAAIIGVGPPVPTEDGAALAFGHRTVRFVPAGGGRTGIVAVDVHATDREHGPGRGGELCHTMINFL
Ga0070680_10026558733300005336Corn RhizosphereAGPRDPAAMARIWAAIIGIEPPVETADGAVLAFGRRRVRFVPARGGRTGIIAVDVHATDREHGPGQQGMLCHTMISFI*
Ga0070675_10031810613300005354Miscanthus RhizosphereAVDVAVAGPRDPAAMARTWAAIIGIEPPVATADGAVLAFGRRTVRFVPARGGRTGIVAVDVHATDREHGTGQQGMLCHTMISFI*
Ga0070667_10135576913300005367Switchgrass RhizosphereMARTWAAIIGIEPPVAGEDGAVLAFGRRTIRFVPARGGRTGIVAVGVHATER
Ga0070709_1099258513300005434Corn, Switchgrass And Miscanthus RhizosphereRTWAAIIGIEPPVATADGAALAFGRRTIRFVPTRGGRTGIVAVDVHATDREHGTRQQGMLCHTMINFT*
Ga0070709_1177486923300005434Corn, Switchgrass And Miscanthus RhizosphereDPAAMARTWAAIIGIEPPVPTEDGAALAFGHRTIRFVPARGGRTGIVAVDVHATDREHGPGRGGELCHTMINFL*
Ga0070709_1177487023300005434Corn, Switchgrass And Miscanthus RhizosphereDPAAMARTWAAIIGIEPPVPTEDGAALAFGHRTIRFVPAQGGRTGIVAVDVHATDREHGPGRGGELCHTMINFL*
Ga0070701_1012879233300005438Corn, Switchgrass And Miscanthus RhizospherePAAMARTWAAIIGIEPPVATADGAVLAFSRRTVRFVPARGGRTGIVAVDVHATDREHGPGQQGMLCHTMISFI*
Ga0070711_10051766423300005439Corn, Switchgrass And Miscanthus RhizosphereAARTTKADDILAVDVAVGDPGDPVAMAQTWAAIIGVGPPVPTEDGAALAFGHRTVRFVPARGGRTGIVAVDVHATDREHGPGRGGELCHTMINFL*
Ga0066687_1061225613300005454SoilLLELDAFLPRDGWFWDDLPEARAARAARTTRADDILAVDVAVGDPRDPVAMAQTWAAIIGIGPPVPTEDGAALAFGHRTIRFVPARGGRTGIVAVDVHATDREHGPGRGGELCHTMINFL
Ga0070681_1131860013300005458Corn RhizosphereRTAKADDIVAVDVAVAGPRDPAAMARTWAAIIGIEPPVATADGAVLAFGRRTVRFVPARGGRTGIVAVDVHATDREHGPGQQGMLCHTMISFI*
Ga0073909_1012507623300005526Surface SoilPAAMARTWAAIIGIEPPVATADGAVLAFGRRTVRFVPARGGRTGIVAVDVHATDREHGTGQQGMLCHTMINFI*
Ga0070731_1070672913300005538Surface SoilDNIVAVDVAAHDPGEMAATWAALIGIAPPTRTPDGAEIAFASRTIRFVPAAGGRTGIVAVDMHATDREHGAGGQGELCHTLIRFV*
Ga0068853_10027756243300005539Corn RhizospherePAAMARTWAAIIGIEPPVAAEDGAVLAFGRRTIRFVPARGGRTAIVAVGVHATEREHGPGEQGELCHTMINFI*
Ga0070695_10022029323300005545Corn, Switchgrass And Miscanthus RhizosphereKADDILAVDVAVAGPRDPAAMARTWAAIIGIEPPVATADGAVLAFGRRTVRFVPARGGRTGIVAVDVHATDREHGPGQQGMLCHTMISFI*
Ga0066661_1014504213300005554SoilDPRDPVAMAQTWAAIIGIGPPVPTEDGAALAFGHRTIRFVPARGGRTGIVAVDVHATDREHGPGRGGELCHTMINFL*
Ga0070664_10020671913300005564Corn RhizospherePRDPAAMARIWAAIIGIEPPVETADGAVLAFGRRTVRFVPARGGRTGIIAVDVHATDREHGPGQQGMLCHTMISFI*
Ga0070761_1064511223300005591SoilIGIEPPASTPDGAALAFSSRTIRFVPAAGGRTGIVAVDIHVTDREHGPGLKGELCNTLIRFV*
Ga0070763_1052483213300005610SoilDDLPEAQAARAARTTKADDILAVDVAVGDPGGPVAMAQTWAAIIGIAPPVPTEDGAALAFGHRTIRFVPARGGRTGIVAVDVHATDREHGPGRGGELCHTMINFL*
Ga0068856_10220662623300005614Corn RhizosphereFLPRDAWFWDDLPEAREAQGARSTKADDIVAVEVAIGSEAGQRDPAAMARTWAAIIGIEPPVAAEDGAVLAFGRRTIRFVPARGGRTGIVAVDVHATEREHGPGEQGELCHTMINFI*
Ga0068870_1008453513300005840Miscanthus RhizosphereDPAAMARTWAAIIGIEPPVATADGAVLAFGRRTVRFVPARGGRTGIVAVDVHATDREHGTGQQGMLCHTMISFI*
Ga0066787_1011755223300005950SoilGGPAAMAATWAAIIGIEPPVATADGAAISFGRRIIRFVPAKAGRTGIVAVDMHATDRAVAGTAGELCNTLIRFV*
Ga0070715_1063639223300006163Corn, Switchgrass And Miscanthus RhizosphereARTWAAIIGIEPPVATADGAALAFGRRTIRFVPTRGGRTGIVAVDVHATDREHGTRQQGMLCHTMINFT*
Ga0070716_10007885933300006173Corn, Switchgrass And Miscanthus RhizosphereAAMARTWAAIIGIEPPVPTEDGAALAFGHRTIRFVPARGGRTGIVAVDVHATDREHGPGRGGELCHTMINFL*
Ga0070716_10097230313300006173Corn, Switchgrass And Miscanthus RhizosphereDDILAVDVAVASPRDPAAMARTWAAIIGIEPPVATADGAALAFGRRTIRFVPTRGGRTGIVAVDVHATDREHGTRQQGMLCHTMINFT*
Ga0070716_10133655813300006173Corn, Switchgrass And Miscanthus RhizosphereTTKADDITAVDVAVDAASDQAAPLAMARTWAAIIGIDPPSAPAITPDGATLAFGRRTIRFVPAHDGRTGIVAVDVHATDRDHVAGSSGTLCNTQIRFT*
Ga0070712_10125002923300006175Corn, Switchgrass And Miscanthus RhizosphereGPRDPAAMARTWAAIIGIEPPVATADGAVLAFGRRTVRFVPARGGRTGIVAVDVHATDREHGTGQQGMLCHTMINFI*
Ga0070712_10177292923300006175Corn, Switchgrass And Miscanthus RhizosphereTTKADDILAVDVAVGDPGDPAAMARTWAAIIGIEPPVPTEDGAALAFGHRTIRFVPAQGGRTGIVAVDVHATDREHGPGRGGELCHTMINFL*
Ga0070712_10194888913300006175Corn, Switchgrass And Miscanthus RhizosphereAMARTWAAIIGIEPPVPTEDGAALAFGHRTIRFVPARGGRTGIVAVDVHATDREHGPGRGGELCHTMINFL*
Ga0079222_1000555113300006755Agricultural SoilHAARTTKADDITAVDVAVDAASDQAAPAAMARTWATIIGIDPPVTTADGATLAFGRRTIRFVPARNGRTGIVAVDLHATDRDHVAGSSGTLCNTQIRFV*
Ga0079222_1129672923300006755Agricultural SoilVMAQTWAAIIGVGPPVPTEDGAALAFGHRTVRFVPARGGRTGIVAVDVHATDREHGPGRGGELCHTMINFL*
Ga0079221_1071157033300006804Agricultural SoilAAHAARTTKADDIVAVDIAVPVGPAPSGAPPGPAAMARTWAAIIGIDPPSAPAITADGGTLAFGRRTIRFVPAQDGRTGIVAVDVHATDRHHVAGSSGTLCNTQIRFT*
Ga0068865_10025811713300006881Miscanthus RhizosphereAKADDILAVDVAVASPRDPAAMARTWAAIIGIEPPVATADGAVLAFGRRTVRFVPARGGRTGIVAVDVHATDREHGPGQQGMLCHTMISFI*
Ga0075426_1082579813300006903Populus RhizosphereDIVAVDIAVPVGPAPSGAPPGPAAMARTWAAIIGIDPPSAPAITADGATLAFGRRTIRFVPAQDGRTGIVAVDVHATDRHHVAGSSGTLCNTQIRFT*
Ga0099795_1036474223300007788Vadose Zone SoilMARTWAAIIGIEPPVETADGAAIAFGRRTIRFVPARGGRTGIVAVGVHATDREHGPGRGGELCHTMINFL*
Ga0105240_1025455113300009093Corn RhizosphereRTAKADDILAVDVAVAGPRDPAAMARTWAAIIGIEPPVATADGAVLAFGRRTVRFVPARGGRTGIVAVDVHATDREHGPGQQGMLCHTMISFI*
Ga0105237_1195986213300009545Corn RhizosphereVAVEVAIGSEAGQRDPAAMARTWAAIIGIEPPVAAEDGAVLAFGRRTVRFVPARGGRTGIVAVGVHATEREHGPGEQGELCHTMINFI*
Ga0116223_1032836523300009839Peatlands SoilMTENRWAELRQVGLEPPVATADGAAIAFSRRTIRFVPARSGRTGIVAVDVHTTDRDHGVGQAGELCH
Ga0126380_1023292913300010043Tropical Forest SoilVDPAVGLRDPVAMAETWAAIIGIEPPVATADGAALPFGRRTIRFGPARGGRTGIIAVDVHATDREHGTGLHGELCHTMITFI*
Ga0126377_1161966713300010362Tropical Forest SoilAIIGIDPPSAPAITADGATLAFGRRTIRFVPAQDSRTGIVAVDVHATDRHYVAGSSGTLCNTQIRFT*
Ga0134125_1094197023300010371Terrestrial SoilVAVEVAIGSEAGQRDPAAMARTWAAIIGIEPPVAAEDGAVLAFGRRTIRFVPARGGRTGIVAVDVHATEREHGPGEQGELCHTMINFI*
Ga0134128_1073656913300010373Terrestrial SoilVAVEVAIGSEAGQRDPAAMARTWAAIIGIEPPVAAEDGAVLAFGRRTIRFVPARGGRTAIVAVGVHATEREHGPGEQGELCHTMINFI*
Ga0136449_10024264153300010379Peatlands SoilMTENRWAELRQVGLEPPVATADGAAIAFSRRTIRFVPARSGRTGIVAVDVHATDRDHGVGQTGELCHTLIRFV*
Ga0134122_1007450813300010400Terrestrial SoilVAVEVAIGSEAGQRDPAAMARTWAAIIGIEPPVAAEDGAVLAFGRRTIRFVPARGGRTGIVAVDVHATEREHGPGERGELCHTMINFI*
Ga0134121_1212358413300010401Terrestrial SoilPRDPAAMARTWAAIIGIEPPVATADGAVLAFGRRTVRFAPARGGRTGIVAVDVHATDREHGTRQQGMLCHTMINFT*
Ga0105246_1106560913300011119Miscanthus RhizosphereMAVAGPRDPAAMARTWAAIIGIEPPVATADGAVLAFGRRTVRFVPARGGRTGIIAVDVHATDREHGPGQQGMLCHTMISF
Ga0137399_1111539123300012203Vadose Zone SoilMARTWAAIIGIEPPVPTEDGAALAFGHRTIRFVPARGGRTRIVAVDVHATDREHGPGPGGELCHTMINFL*
Ga0137377_1008633513300012211Vadose Zone SoilDDLPEARAARAARTTKADDILAVDVAVGDPGDPVAMARTWAAIIGIERPVPTKDGAALAFGHRTIRFVPARGGRTGIVAVDVHATDREHGPGPGGELCHTIINFI*
Ga0137398_1067494423300012683Vadose Zone SoilMGQTWAAIIGIEPAVPTEDGAALAFGHRTIRFVPARGGRTRIVAVDVHATDREHGPGPGGELCH
Ga0137413_1046600713300012924Vadose Zone SoilMARTWAAIIGIEPPVPTEDGAALAFGHRTIRFVPARGGRTRIVAVDVHATDREHGPGPGGELCHTMINFL
Ga0164301_1062165013300012960SoilILAVDVAVAGPRDPAAMARIWAAIIGIAPPVATADGPVLAFGRRTVRFVPARGGRTGIVAVDVHATDREHGTRQQGMLCHTMINFT*
Ga0157370_1143272713300013104Corn RhizosphereLRKTGSSQAARAARTTKADDILAVDVAVGDPGDPAAMARTWAAIIGIEPPVPTEDGAALAFGHRTIRFVPAQGGRTGIVAVDVHATDRERGTGQQGVLCHTMINFV*
Ga0157380_1171687313300014326Switchgrass RhizosphereDIVAVDVAVAGPRDPAAMARTWAAIIGIEPPVATADGAVLAFGRRTVRFVPARGGRTGIVAVDVHATDREHGPGQQGMLCHTMISFI*
Ga0157377_1000413373300014745Miscanthus RhizosphereDILAVDVAVAGPRDPAAMARTWAAIIGIAPPVATADGAVLAFGRRTVRFAPARGGRTGIVAVDVHATDREHGPGQQGMLCHTMISFI*
Ga0182030_1121935013300014838BogTMAATWAAIIGIAPPVATADGAAIAFSGRPIRFVPAAGGRTGIVAVDVHATDRQHVAGLKGELCNTLIRFV*
Ga0182033_1014783713300016319SoilAIIGLERPARTADGAAIAFGRRTIRFVAAVGGRTGIVAVDLHATDREHGTGRTGELCHTLIRFV
Ga0182039_1145754223300016422SoilADDIVAVDVAVDPEAGPRDPVTMAATWAAIVGIEPPVTTADGAALALGRRAIRFVSAARGGRTGIVAVDVHATDREHGTGRHGELCNTLIRFV
Ga0187802_1020034113300017822Freshwater SedimentDVATEDPATLAATWAAIIGLEHPAQTVDGAAIAFGSRTIRFVPAAGGRTGIVAVDLHATDREHGPGLKGELCNTLIRLV
Ga0187820_101370113300017924Freshwater SedimentAATWAAIIGLPSPAATADGAALAFGGRTVRFVPAAGGPADRPAGGRTGIVAVDLHATDREHGVGLAGELCHTLIRFV
Ga0187821_1032898923300017936Freshwater SedimentPVAMAQTWAVIIGIEPAVPTEDGAVLAFGHRTIRFVPARGGRTGIVAVDVHATDREHGPGRGGELCHTMINFL
Ga0187817_1007606813300017955Freshwater SedimentAALAATWSALIGIEPPTETPDGAAIAFSSRTIRFVPSAGGRTGIVAVDLHATDREHGPGLKGELCNTLIRLV
Ga0187780_1044674433300017973Tropical PeatlandAIIGLDPPAATVDGAAIAFSSRTIRFVPATSGRTGIVAVDVHATDREHGAGVQGELCRTVIRFV
Ga0187815_1036648913300018001Freshwater SedimentVAVEDPVAMAATWAALIGLAPPTATPDGAALAFSSRTIRFVPAAGGRTGIVAVDVHATDREHGPGRKGELCNTLIRFV
Ga0187765_1132730313300018060Tropical PeatlandARTARADDIVAVEVAVDPAAGLRDPAAMAETWAAIIGVGPPVATVDGAALAFGRRTIRFVPARGGRTGIVAVDVHATDREHGTGVSGELCNTLIRFV
Ga0206356_1101807133300020070Corn, Switchgrass And Miscanthus RhizosphereADDILAVDVAVASPRDPAAMARTWAAIIGIEPPVATADGAVLAFGRRTVRFVPARGGRTGIVAVDVHATDREHGPGQQGMLCHTMISFI
Ga0210407_1032722423300020579SoilMAQTWAAIIGIEPPVPTEDGAALAFGHRTIRFVPARGGRTGIVAVDVHATDREHGPGRGGELCHTMINFL
Ga0210405_1031254233300021171SoilTWAALIGIAPPTRMPDGAEIAFASRTVRFVPVTGGRTGIVAIDMHTTDREHGAGGQGELCHTLIRFV
Ga0213881_1050386923300021374Exposed RockTTKADDIVAVDVAVADPAAMAVSWAAIIGIDPPPVMANSATADGAALAFGRRTIRFVPATSGRTGIVAVDVHATDRIHGVGAHGTLCHTQIRFA
Ga0210385_1133703423300021402SoilMARIWAAIIGIAPPVATADGAVLAFGRRTVRFVPARGGRTGIVAVDVHATDREHGTGQQGMLCHTMINFI
Ga0210394_1134952323300021420SoilMAATWAALIGIAPPTRMPDGAEIAFASRTVRFVPVTGGRTGIVAIDMHTTDREHGAGGQGELCHTLIRFV
Ga0179589_1010660423300024288Vadose Zone SoilTAMARTWAAIIGIEPPVPTEDGAALAFGHRTIRFVPARGGRTRIVAVDVHATDREHGPGPGGELCHTMINFL
Ga0208076_105750513300025464Arctic Peat SoilAMARTWAAIIGIDPPVATANDATLALGSRAIRFVPARDGRTGIVAVDVHATDRDHVAGSVGELCHTQIRFV
Ga0207692_1004948933300025898Corn, Switchgrass And Miscanthus RhizosphereAARTAKADDILAVDVAVAGPRDPAVTARTWAAIIGIEPPVATADGAALAFGRRTIRFVPTRGGRTGIVAVDVHATDREHGTRQQGMLCHTMINFT
Ga0207671_1101702723300025914Corn RhizosphereVLLELVAFLPRDGWFWDDLPEAQAARAARTTKADDILAVDVAVGDPGDPAAMARTWAAIIGIEPPVPTEDGAALAFGHRTIRFVPAQGGRTGIVAVDVHATDREHGPGRGGELCHTMINF
Ga0207662_1101481513300025918Switchgrass RhizosphereVASPRDPAAMARTWAAIIGIEPPVATADGAVLAFGRRTVRFVPARGGRTGIVAVDVHATDREHGPGQQGMLCHTMISFI
Ga0207649_1038028413300025920Corn RhizosphereDPAAMARTWAAIIGIEPPVATADGAVLAFGRRTVRFVPARGGRTGIVAVDVHATDREHGPGQQGMLCHTMISFI
Ga0207700_1052377633300025928Corn, Switchgrass And Miscanthus RhizosphereAHAARTTKADDITAVDVAVDAASDQAAPLAMARTWAAIIGIDPPSAPAITPDGATLAFGRRTIRFVPAHDGRTGIVAVDVHATDRDHVAGSSGILCNTQIRFT
Ga0207700_1085448723300025928Corn, Switchgrass And Miscanthus RhizospherePGDPAAMARTWAAIIGIEPPVPTEDGAALAFGHRTIRFVPARGGRTGIVAVDVHATDREHGPGRGGELCHTMINFL
Ga0207700_1162429023300025928Corn, Switchgrass And Miscanthus RhizospherePPSGGPPCPAPSGGPAGPAAMARTWAAIIGIDPPSAPAITADGATLAFGRRTIRFVPARDGRTGIVAVDVHATDRHHVAGSSGTLCNTQIRFT
Ga0207691_1033628433300025940Miscanthus RhizosphereDIVAVDVAVAGPRDPAAMARIWAAIIGIEPPVETADGAVLAFGRRRVRFVPARGGRTGIIAVDVHATDREHGPGQQGMLCHTMISFI
Ga0207679_1011079833300025945Corn RhizosphereIGIEPPVETADGAVLAFGRRRVRFVPARGGRTGIIAVDVHATDREHGPGQQGMLCHTMISFI
Ga0208237_106231913300027080Forest SoilQDPAAMAATWAALIGIEPPASTPDGAALAFSSRTIRFVPAAGGRTGIVAVDIHVTDREHGPGLKGELCNTLIRFV
Ga0209178_119815523300027725Agricultural SoilAAHAARTTKADDIVAVDIAVPVGPAPSGAPPGPAAMARTWAAIIGIDPPSAPAITADGGTLAFGRRTIRFVPAQDGRTGIVAVDVHATDRHHVAGSSGTLCNTQIRFT
Ga0247683_101194013300027991SoilAAMARTWAAIIGIEPPVATADGAVLAFGRRTVRFVPARGGRTGIVAVDVHATDREHGPGQQGMLCHTMISFI
Ga0247682_101939123300028146SoilDPAAMARIWAAIIGIEPPVETADGAVLAFGRRTVRFVPARSGRTGIVAVDVHATDREHGPGQQGMLCHTMISFI
Ga0307323_1005403313300028787SoilGARTTKADDIVTAEVAVGSEAGQRDPVAMARTWAAIIGIEPPVATEDGAALAFGRRTVRFVPARGGRTGIVAVDVHATDREHGPGEQGELCHTMITFV
Ga0307290_1038209513300028791SoilGQRDPVAMARTWAAIIGIEPPMATADGAALAFGRRTIRFVPARSGRTGIVAVDVHATDREHGPGEQGELCHTMINFV
Ga0307504_1026887623300028792SoilMARTWAAIIGIEPPVATADGAALAFGRRTIRFVPARGGRTGIVAVDVHATDREHGTGQQGMLCHTMINFI
Ga0307286_1018127223300028876SoilRDPVAMARTWAAIIGIEPPMATADGAALAFGRRTIRFVPARSGRTGIVAVDVHATDREHGPGEQGELCHTMINFV
Ga0302229_1037182923300028879PalsaVDDILAVDVAVAEPAAMAATWAAIIGLEPPAVTADGAAIAFSRRTIRFVPATSGRTGIVAVDMHATDRDHGVGLQGELCNTLIRFV
Ga0302178_1045255313300030013PalsaAADPAAMAATWAAIIGIDPPVTTADGAAIAFSGRPIRFVPAAGGRTGIVAVDVHATDRQNVAGLKGEFCNTLIRFV
Ga0311370_1144539123300030503PalsaWAAIIGLEPPAVTADGAAIAFSRRTIRFVPATSGRTGIVAVDMHATDRDHGVGLQGELCNTLIRFV
Ga0307499_1030691213300031184SoilRDPAAMAQTWAAIIGIEPPVPTEDGAVLAFGRRTVRFVPARGGRTGIVAVDVHATDREHGTGQQGMLCHTMISFI
Ga0318534_1049944623300031544SoilAEDPAVMAATWAALINIEPPEQTADGAAIALGSRTIRFVPAAGGRTGIVAVDLHATDREHGAGLKGELCNTLIRFA
Ga0318571_1011090913300031549SoilKADDIVAVDVAVDPEAGPRDPVTMAATWAAIVGIEPPVTTADGAALALGRRAIRFVPARGGRTGIVAVDVHATDREHGTGRHGELCNTLIRFV
Ga0318555_1034702813300031640SoilGAARTAKADDIVAVDVAVDPEAGPRDPVTMAATWAAIVGIEPPVTTADGAALALGRRAIRFVPARGGRTGIVAVDVHATDREHGTRRHGVLCNTLIRFV
Ga0307468_10154989513300031740Hardwood Forest SoilRDGWFWDHLPAAQAARTAKADDILAVDVAVAGPRDPAAMARTWAAIIGIEPPVPTEDGAALAFGHRTIRFVPAQGGRTGIVAVDVHATDREHGPGRGGELCHTMINFL
Ga0318521_1057847713300031770SoilTMAATWAAIVGIEPPVATADGAALALGRRAIRFVPARGGRTGIVAVDMHATDREHGTGRHGELCNTLIRFV
Ga0318543_1009760613300031777SoilAHAARTAKADDIVAVDVAVDPEAGPRDPVTMAATWAAIVGIEPPVTTADGAALALGRRAIRFVPARGGRTGIVAVDVHATDREHGTRRHGVLCNTLIRFV
Ga0318498_1021251313300031778SoilAEDPAGMAATWAAIIGIEPPTETADGAAIAFGSRTIQFVPAAGGRTGIVAADMHATDREHGTGVEGELCNTLIRFV
Ga0318529_1016828923300031792SoilMAETWAAIIGLEPPARAADGAAIAFGSRTIRFVAAAGGRTGIVAVDLHVTDREHGTGRTGELCNTLIRFV
Ga0318550_1028747113300031797SoilHAARTVKTDDIVAVDVAVDPEAGPRDPVTMAATWAAIVGIEPPVATADGAALAFGRRAIRFVSAARGGRTGIVAVDMHATDREHGTGRHGELCNTLIRFV
Ga0318568_1048010223300031819SoilADDIVAVEVAVDPATGLRDPVAMAETWAAIIGIELPVATADGAALAFGRRTIRFVPARGGRTGIVAVDLHATDREHGTGQHGELCHTTISFI
Ga0310910_1070274613300031946SoilRTVKADDIVAVDVAVDPEAGPRDPVTMAATWAAIVGIEPPVATADGAALALGRRAIRFVPARGGRTGIVAVDMHATDREHGTGRHGELCNTLIRFV
Ga0306926_1109749813300031954SoilVDVAAADPAAMAETWAAIIGLERPARTADGAAIAFGRRTIRFVAAVGGRTGIVAVDLHATDREHGTGRTGELCHTLIRFV
Ga0310911_1067398023300032035SoilEDPAAMAATWAALINIEPLEQPADGAAIALGSRTIRFVPAAGGRSGIVAVDLHATDREHGAGLKGELCNTLIRFV
Ga0318506_1015404123300032052SoilRDPDAMAETWAAIIGLEPPARAADGAAIAFGSRTIRFVAAAGGRTGIVAVDLHVTDREHGTGRTGELCNTLIRFV
Ga0318570_1016174513300032054SoilPVTMAATWAAIVGIEPPVTTADGAALALGRRAIRFVPARGGRTGIVAVDVHATDREHGTRRHGVLCNTLIRFV
Ga0318510_1050883013300032064SoilRTAKADDIVAVEVAVDPAAGQRDPVAMAETWAAIIGIQLPVATADGALLAFGHRTIKFVPAQGGRTGIVAVDLHATDREHGTGRTGELCNTLIRFV
Ga0318525_1020696623300032089SoilIGLEPPARAADGAAIAFGSRTIRFVAAAGGRTGIVAVDLHVTDREHGTGRTGELCNTLIRFV
Ga0311301_1013504733300032160Peatlands SoilMTENRWAELRQVGLEPPVATADGAAIAFSRRTIRFVPARSGRTGIVAVDVHATDRDHGVGQTGELCHTLIRFV
Ga0307470_1162508513300032174Hardwood Forest SoilARTWAAIIGIEPPVAAEDGAVLAFGRRTIRFVPARGGRTGIVAVDVHATEREHGPGEQGELCHTMINFI
Ga0307472_10219858313300032205Hardwood Forest SoilVAVDVAVAGPRDPAAMARIWAAIIGIEPPVETADGAVLAFGRRRVRFVPARGGRTGIIAVDVHATDREHGPGQQGMLCHTMISFI
Ga0335085_1064156413300032770SoilKADDIVAVDVAAGDPAAMAQTWAAIIGLDPPVPTPDGAALAFSRRTIRFVPPLGGRTGIVAVDVHATDRDRGVGRQGELCRTLIRFV
Ga0335078_1152024023300032805SoilWAAIIGLDPPVPTPDGAALAFSRRTIRFVPPRSGRTGIVAVDVHATDREHGVGRQGELCHTLIRFV
Ga0335078_1251154413300032805SoilHGTERARFTPHPAAMAETWAAIIGIEPPVATADGAALAFGRRTIRFGPARGGRTGIVAVDVHATDREHGTGLHGELCHTLITFI
Ga0335080_1003940513300032828SoilAHTWAAIIGLDPPVPTPDGAALAFSRRTIRFVPPRNGRTGIVAVDVRATDRDHGVGRQGELCHTLIRFV
Ga0335080_1169065313300032828SoilQTWAAIIGLDPPVPTPDGAALAFSRRTIRFVPPRSGRTGIVAVDVHATDRDHGVGRQGELCHTLIRFV
Ga0335069_1006794373300032893SoilIEPPVATADGATLALGRRAIRFVPARGGRTGIVAVDVHATDREHGTGRHGELCNTLIRFV
Ga0335074_1103823133300032895SoilRDPAALAATWAAIIGLEPPALVTTGAADGAEIAFSSRTIRFVPAAGGRTGIVAVDLHATDRANGPGSSGDLCNTKIRLV
Ga0335072_1147119713300032898SoilPAAMARIWAAIIGIDPPIATADGAELAFSRRTIRFVPARDGRTGIVAVDLHATDRANGPGSSGDLCNTKIRLV
Ga0335077_1088139113300033158SoilADPAAMAHTWAAIIGLDPPVPTPDGAALAFSRRTIRFVPPRSGRTGIVAVDVHATDRDHGVGRQGELCHTLIRFV
Ga0310914_1048790013300033289SoilGIEPPVATADGAALAFGRRAIRFVSAARGGRTGIVAVDVHATDREHGTGRHGELCNTLIRFV
Ga0310914_1062393323300033289SoilAVDVAAEDPAAMAATWAAIIGIEPPTETADGAAIAFGSRTIQFVPAAGGRTGIVAADMHATDREHGTGVEGELCNTLIRFV


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.