Metagenome Family F069351

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069351
Family Type	Metagenome
Number of Sequences	124
Average Sequence Length	50 residues
Representative Sequence	MNTYQKTDNKIIRTYVINESIYKKFKDVAEKDMRKLSNIIQQSIIRYINSKS
Number of Associated Samples	100
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	25.20 %
% of genes near scaffold ends (potentially truncated)	47.58 %
% of genes from short scaffolds (< 2000 bps)	94.35 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (52.419 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (46.774 % of family members)
Environment Ontology (ENVO)	Unclassified (89.516 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (92.742 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.77% β-sheet: 17.31% Coil/Unstructured: 26.92%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF11867	DUF3387	5.65
PF01863	YgjP-like	3.23
PF13588	HSDR_N_2	3.23
PF00118	Cpn60_TCP1	2.42
PF02493	MORN	2.42
PF01555	N6_N4_Mtase	1.61
PF16805	Trans_coact	0.81
PF13783	DUF4177	0.81
PF08534	Redoxin	0.81
PF13640	2OG-FeII_Oxy_3	0.81
PF07669	Eco57I	0.81
PF01230	HIT	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG1451	UTP pyrophosphatase, metal-dependent hydrolase family	General function prediction only [R]	3.23
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	2.42
COG2849	Antitoxin component YwqK of the YwqJK toxin-antitoxin module	Defense mechanisms [V]	2.42
COG4642	Uncharacterized conserved protein	Function unknown [S]	2.42
COG0863	DNA modification methylase	Replication, recombination and repair [L]	1.61
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	1.61
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	1.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.42 %
All Organisms	root	All Organisms	47.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.42 %
cellular organisms	root	All Organisms → cellular organisms	35.48 %
Viruses	superkingdom	All Organisms → Viruses	12.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.42 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.48 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	31.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.48 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	1.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.42 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.48 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	1.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.81 %
Zetaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.42 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	19.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.48 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.61 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.81 %
Mariprofundales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → Mariprofundales	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.42 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	18.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.48 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1.61 %
Mariprofundaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → Mariprofundales → Mariprofundaceae	0.81 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.81 %
unclassified Pelagibacterales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.42 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	16.13 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.48 %
unclassified Pelagibacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae	2.42 %
Autographiviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	1.61 %
Synechococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae	0.81 %
Mariprofundus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → Mariprofundales → Mariprofundaceae → Mariprofundus	0.81 %
Pelagibacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.42 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	14.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.48 %
alpha proteobacterium HIMB5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB5	2.42 %
Fussvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Fussvirus	1.61 %
Synechococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus	0.81 %
Mariprofundus ferrooxydans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → Mariprofundales → Mariprofundaceae → Mariprofundus → Mariprofundus ferrooxydans	0.81 %
Pelagibacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.42 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	14.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.48 %
alpha proteobacterium HIMB5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB5	2.42 %
Fussvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Fussvirus	1.61 %
unclassified Synechococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus	0.81 %
Mariprofundus ferrooxydans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → Mariprofundales → Mariprofundaceae → Mariprofundus → Mariprofundus ferrooxydans	0.81 %
Pelagibacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.42 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	14.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.48 %
alpha proteobacterium HIMB5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB5	2.42 %
Fussvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Fussvirus	1.61 %
Synechococcus sp. CBW1108	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. CBW1108	0.81 %
Mariprofundus ferrooxydans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → Mariprofundales → Mariprofundaceae → Mariprofundus → Mariprofundus ferrooxydans	0.81 %
Pelagibacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573026\|GS311G0146KB_1112079610759	Not Available	902	Open in IMG/M
3300000225\|SI34jun09_120mDRAFT_1059214	Not Available	693	Open in IMG/M
3300001450\|JGI24006J15134_10062830	All Organisms → Viruses → Predicted Viral	1460	Open in IMG/M
3300001589\|JGI24005J15628_10224617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	510	Open in IMG/M
3300001956\|GOS2266_1008372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1820	Open in IMG/M
3300004276\|Ga0066610_10240046	All Organisms → cellular organisms → Bacteria → Proteobacteria	582	Open in IMG/M
3300004278\|Ga0066609_10156132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	735	Open in IMG/M
3300004280\|Ga0066606_10046677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1737	Open in IMG/M
3300004280\|Ga0066606_10349969	Not Available	518	Open in IMG/M
3300005239\|Ga0073579_1009319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1720	Open in IMG/M
3300005398\|Ga0066858_10034581	Not Available	1503	Open in IMG/M
3300005398\|Ga0066858_10070019	Not Available	1029	Open in IMG/M
3300005398\|Ga0066858_10117757	Not Available	773	Open in IMG/M
3300005399\|Ga0066860_10298801	Not Available	533	Open in IMG/M
3300005400\|Ga0066867_10118865	Not Available	995	Open in IMG/M
3300005431\|Ga0066854_10203170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	668	Open in IMG/M
3300005508\|Ga0066868_10158770	Not Available	701	Open in IMG/M
3300005509\|Ga0066827_10166242	Not Available	780	Open in IMG/M
3300005603\|Ga0066853_10205170	Not Available	656	Open in IMG/M
3300005604\|Ga0066852_10172742	Not Available	750	Open in IMG/M
3300005605\|Ga0066850_10289501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	579	Open in IMG/M
3300005931\|Ga0075119_1032555	All Organisms → Viruses → Predicted Viral	1432	Open in IMG/M
3300006164\|Ga0075441_10059430	All Organisms → Viruses → Predicted Viral	1503	Open in IMG/M
3300006165\|Ga0075443_10119469	Not Available	917	Open in IMG/M
3300006190\|Ga0075446_10052538	All Organisms → Viruses → Predicted Viral	1258	Open in IMG/M
3300006190\|Ga0075446_10110636	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300006191\|Ga0075447_10098314	Not Available	1017	Open in IMG/M
3300006191\|Ga0075447_10300158	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300006193\|Ga0075445_10003688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7391	Open in IMG/M
3300006193\|Ga0075445_10153544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	826	Open in IMG/M
3300006735\|Ga0098038_1158274	Not Available	751	Open in IMG/M
3300006737\|Ga0098037_1286529	Not Available	522	Open in IMG/M
3300006900\|Ga0066376_10215887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1145	Open in IMG/M
3300006902\|Ga0066372_10375164	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300009071\|Ga0115566_10398855	Not Available	793	Open in IMG/M
3300009172\|Ga0114995_10156605	Not Available	1271	Open in IMG/M
3300009172\|Ga0114995_10159856	Not Available	1257	Open in IMG/M
3300009193\|Ga0115551_1108669	Not Available	1296	Open in IMG/M
3300009409\|Ga0114993_10277609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1279	Open in IMG/M
3300009420\|Ga0114994_10126115	Not Available	1738	Open in IMG/M
3300009420\|Ga0114994_10293247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1085	Open in IMG/M
3300009420\|Ga0114994_10324905	All Organisms → Viruses → Predicted Viral	1023	Open in IMG/M
3300009420\|Ga0114994_10496577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	804	Open in IMG/M
3300009422\|Ga0114998_10041081	Not Available	2496	Open in IMG/M
3300009422\|Ga0114998_10049590	All Organisms → Viruses → Predicted Viral	2212	Open in IMG/M
3300009422\|Ga0114998_10116843	All Organisms → cellular organisms → Bacteria → Proteobacteria	1303	Open in IMG/M
3300009422\|Ga0114998_10188702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	982	Open in IMG/M
3300009422\|Ga0114998_10385640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB5	655	Open in IMG/M
3300009425\|Ga0114997_10357717	Not Available	796	Open in IMG/M
3300009449\|Ga0115558_1189225	Not Available	853	Open in IMG/M
3300009472\|Ga0115554_1201763	Not Available	806	Open in IMG/M
3300009497\|Ga0115569_10382937	Not Available	608	Open in IMG/M
3300009512\|Ga0115003_10208807	Not Available	1172	Open in IMG/M
3300009705\|Ga0115000_10527013	All Organisms → cellular organisms → Bacteria → Proteobacteria	741	Open in IMG/M
3300009705\|Ga0115000_10936726	Not Available	529	Open in IMG/M
3300009785\|Ga0115001_10083494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → Mariprofundales → Mariprofundaceae → Mariprofundus → Mariprofundus ferrooxydans	2095	Open in IMG/M
3300009785\|Ga0115001_10584574	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300012953\|Ga0163179_11082618	Not Available	703	Open in IMG/M
3300017697\|Ga0180120_10043834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2031	Open in IMG/M
3300017730\|Ga0181417_1152902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB5	556	Open in IMG/M
3300017750\|Ga0181405_1080795	Not Available	831	Open in IMG/M
3300017757\|Ga0181420_1229126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	532	Open in IMG/M
3300017781\|Ga0181423_1193797	Not Available	772	Open in IMG/M
3300017782\|Ga0181380_1130149	Not Available	863	Open in IMG/M
3300017786\|Ga0181424_10436776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	529	Open in IMG/M
3300017818\|Ga0181565_10508378	Not Available	782	Open in IMG/M
3300017967\|Ga0181590_10194078	Not Available	1529	Open in IMG/M
3300019459\|Ga0181562_10611820	Not Available	508	Open in IMG/M
3300020262\|Ga0211537_1016788	Not Available	1627	Open in IMG/M
3300020262\|Ga0211537_1025102	All Organisms → Viruses → Predicted Viral	1231	Open in IMG/M
3300020262\|Ga0211537_1031019	All Organisms → Viruses → Predicted Viral	1063	Open in IMG/M
3300020272\|Ga0211566_1105022	Not Available	587	Open in IMG/M
3300020304\|Ga0211684_1027326	Not Available	791	Open in IMG/M
3300020385\|Ga0211677_10092895	All Organisms → Viruses → Predicted Viral	1325	Open in IMG/M
3300020389\|Ga0211680_10256850	Not Available	656	Open in IMG/M
3300020455\|Ga0211664_10134143	Not Available	1159	Open in IMG/M
3300020474\|Ga0211547_10190273	All Organisms → cellular organisms → Bacteria → Proteobacteria	1056	Open in IMG/M
3300020475\|Ga0211541_10174995	Not Available	1055	Open in IMG/M
3300021185\|Ga0206682_10324268	All Organisms → cellular organisms → Bacteria → Proteobacteria	666	Open in IMG/M
3300021365\|Ga0206123_10459967	Not Available	515	Open in IMG/M
3300021371\|Ga0213863_10419615	Not Available	537	Open in IMG/M
3300021378\|Ga0213861_10111895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1608	Open in IMG/M
3300021958\|Ga0222718_10100958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	1701	Open in IMG/M
3300022225\|Ga0187833_10202167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1166	Open in IMG/M
3300023245\|Ga0222655_1012279	Not Available	1691	Open in IMG/M
3300025138\|Ga0209634_1236207	Not Available	671	Open in IMG/M
3300025663\|Ga0209775_1212059	All Organisms → cellular organisms → Bacteria → Proteobacteria	521	Open in IMG/M
3300025707\|Ga0209667_1173578	Not Available	622	Open in IMG/M
3300025770\|Ga0209362_1084642	All Organisms → cellular organisms → Bacteria → Proteobacteria	1222	Open in IMG/M
3300025886\|Ga0209632_10163656	All Organisms → cellular organisms → Bacteria → Proteobacteria	1212	Open in IMG/M
3300025894\|Ga0209335_10128967	All Organisms → Viruses → Predicted Viral	1265	Open in IMG/M
3300025894\|Ga0209335_10178247	Not Available	999	Open in IMG/M
3300026188\|Ga0208274_1087101	Not Available	742	Open in IMG/M
3300026192\|Ga0207986_1066690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	829	Open in IMG/M
3300026206\|Ga0207988_1120570	Not Available	595	Open in IMG/M
3300026208\|Ga0208640_1119773	Not Available	537	Open in IMG/M
3300026212\|Ga0208409_1070686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	833	Open in IMG/M
3300026253\|Ga0208879_1348665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	525	Open in IMG/M
3300026267\|Ga0208278_1041817	Not Available	1147	Open in IMG/M
3300026279\|Ga0208411_1088969	Not Available	880	Open in IMG/M
3300027668\|Ga0209482_1114979	Not Available	840	Open in IMG/M
3300027672\|Ga0209383_1017439	All Organisms → Viruses → Predicted Viral	3167	Open in IMG/M
3300027672\|Ga0209383_1066461	Not Available	1293	Open in IMG/M
3300027687\|Ga0209710_1228749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	615	Open in IMG/M
3300027752\|Ga0209192_10078163	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Fussvirus	1412	Open in IMG/M
3300027752\|Ga0209192_10257540	Not Available	643	Open in IMG/M
3300027779\|Ga0209709_10298635	Not Available	687	Open in IMG/M
3300027780\|Ga0209502_10152692	Not Available	1108	Open in IMG/M
3300027780\|Ga0209502_10424233	Not Available	539	Open in IMG/M
3300027788\|Ga0209711_10212809	Not Available	884	Open in IMG/M
3300027791\|Ga0209830_10128007	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Fussvirus	1236	Open in IMG/M
3300027801\|Ga0209091_10110498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → alpha proteobacterium HIMB5	1466	Open in IMG/M
3300027813\|Ga0209090_10225278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. CBW1108	957	Open in IMG/M
3300027813\|Ga0209090_10541406	Not Available	536	Open in IMG/M
3300028194\|Ga0257106_1146078	Not Available	833	Open in IMG/M
3300028487\|Ga0257109_1048892	All Organisms → Viruses → Predicted Viral	1361	Open in IMG/M
3300031598\|Ga0308019_10094553	All Organisms → Viruses → Predicted Viral	1224	Open in IMG/M
3300031626\|Ga0302121_10251529	Not Available	500	Open in IMG/M
3300031630\|Ga0308004_10179375	Not Available	872	Open in IMG/M
3300031659\|Ga0307986_10096376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1444	Open in IMG/M
3300031696\|Ga0307995_1149514	Not Available	867	Open in IMG/M
3300031700\|Ga0302130_1081988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1038	Open in IMG/M
3300032073\|Ga0315315_11243582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	657	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	98.39%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.61%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	50.81%
Unclassified	Environmental → Aquatic → Marine → Unclassified	24.19%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	8.87%
Pelagic	Environmental → Aquatic → Marine → Pelagic	4.84%
Strait	Environmental → Aquatic → Marine → Strait	4.84%
Coastal	Environmental → Aquatic → Marine → Coastal	2.42%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	2.42%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	50.81%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	24.19%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	6.45%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	4.84%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	4.84%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.42%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	2.42%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.61%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	46.77%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	20.16%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	4.84%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	4.03%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	4.03%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	3.23%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	2.42%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	2.42%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	2.42%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	1.61%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.61%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.81%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.81%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.81%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine Estuarine	0.81%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.81%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.81%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	0.81%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573026	Marine microbial communities from Columbia River, CM, sample from Cape Meares, GS311-FOS-0p8-Deep1200	Environmental	Open in IMG/M
3300000225	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 120m	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001589	Marine viral communities from the Pacific Ocean - LP-40	Environmental	Open in IMG/M
3300001956	Marine microbial communities from Rangirora Atoll, Polynesia Archipelagos - GS051	Environmental	Open in IMG/M
3300004276	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_165m	Environmental	Open in IMG/M
3300004278	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_150m	Environmental	Open in IMG/M
3300004280	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_100m	Environmental	Open in IMG/M
3300005239	Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of Maine	Environmental	Open in IMG/M
3300005398	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201	Environmental	Open in IMG/M
3300005399	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F14-07SV275	Environmental	Open in IMG/M
3300005400	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261	Environmental	Open in IMG/M
3300005431	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV75	Environmental	Open in IMG/M
3300005508	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259	Environmental	Open in IMG/M
3300005509	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV51	Environmental	Open in IMG/M
3300005603	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61	Environmental	Open in IMG/M
3300005604	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63	Environmental	Open in IMG/M
3300005605	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67	Environmental	Open in IMG/M
3300005931	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK9	Environmental	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006165	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA	Environmental	Open in IMG/M
3300006190	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA	Environmental	Open in IMG/M
3300006191	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA	Environmental	Open in IMG/M
3300006193	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006900	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A	Environmental	Open in IMG/M
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009193	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009422	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009449	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426	Environmental	Open in IMG/M
3300009472	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404	Environmental	Open in IMG/M
3300009497	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017730	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300017782	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19	Environmental	Open in IMG/M
3300017786	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019459	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020262	Marine microbial communities from Tara Oceans - TARA_B100000097 (ERX556100-ERR599172)	Environmental	Open in IMG/M
3300020272	Marine microbial communities from Tara Oceans - TARA_B100001971 (ERX556120-ERR599127)	Environmental	Open in IMG/M
3300020304	Marine microbial communities from Tara Oceans - TARA_B100000787 (ERX556110-ERR599176)	Environmental	Open in IMG/M
3300020385	Marine microbial communities from Tara Oceans - TARA_B100001059 (ERX556045-ERR598965)	Environmental	Open in IMG/M
3300020389	Marine microbial communities from Tara Oceans - TARA_B100000809 (ERX556139-ERR599008)	Environmental	Open in IMG/M
3300020455	Marine microbial communities from Tara Oceans - TARA_B100000965 (ERX555917-ERR599081)	Environmental	Open in IMG/M
3300020474	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)	Environmental	Open in IMG/M
3300020475	Marine microbial communities from Tara Oceans - TARA_B100002029 (ERX555951-ERR599001)	Environmental	Open in IMG/M
3300021185	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300021371	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497	Environmental	Open in IMG/M
3300021378	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300022225	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_400_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300023245	Saline water microbial communities from Ace Lake, Antarctica - #423	Environmental	Open in IMG/M
3300025138	Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)	Environmental	Open in IMG/M
3300025663	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_135m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025707	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI074_LV_165m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025770	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_165m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025886	Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)	Environmental	Open in IMG/M
3300025894	Pelagic Microbial community sample from North Sea - COGITO 998_met_09 (SPAdes)	Environmental	Open in IMG/M
3300026188	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV43 (SPAdes)	Environmental	Open in IMG/M
3300026192	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV89 (SPAdes)	Environmental	Open in IMG/M
3300026206	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV74 (SPAdes)	Environmental	Open in IMG/M
3300026208	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV72 (SPAdes)	Environmental	Open in IMG/M
3300026212	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201 (SPAdes)	Environmental	Open in IMG/M
3300026253	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A (SPAdes)	Environmental	Open in IMG/M
3300026267	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259 (SPAdes)	Environmental	Open in IMG/M
3300026279	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261 (SPAdes)	Environmental	Open in IMG/M
3300027668	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA (SPAdes)	Environmental	Open in IMG/M
3300027672	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes)	Environmental	Open in IMG/M
3300027687	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)	Environmental	Open in IMG/M
3300027752	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)	Environmental	Open in IMG/M
3300027779	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)	Environmental	Open in IMG/M
3300027780	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 (SPAdes)	Environmental	Open in IMG/M
3300027788	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)	Environmental	Open in IMG/M
3300027791	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)	Environmental	Open in IMG/M
3300027801	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)	Environmental	Open in IMG/M
3300027813	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)	Environmental	Open in IMG/M
3300028194	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_10m	Environmental	Open in IMG/M
3300028487	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_2000m	Environmental	Open in IMG/M
3300031598	Marine microbial communities from water near the shore, Antarctic Ocean - #284	Environmental	Open in IMG/M
3300031626	Marine microbial communities from Western Arctic Ocean, Canada - CB21_surface	Environmental	Open in IMG/M
3300031630	Marine microbial communities from water near the shore, Antarctic Ocean - #38	Environmental	Open in IMG/M
3300031659	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82	Environmental	Open in IMG/M
3300031696	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #262	Environmental	Open in IMG/M
3300031700	Marine microbial communities from Western Arctic Ocean, Canada - CB9_surface	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GS311G0146KB_00523820	2189573026	Marine Estuarine	MNTYQKTDNKIIRTYVINESIYKKFKDVAEKDMRKLSNIIQQSIIRYINSKS
SI34jun09_120mDRAFT_10592141	3300000225	Marine	MFYQKTNEPKIIRTYVVNKSIYXQFKTVAEKDMRKXSNIIEQAIIRYIRS
JGI24006J15134_100628304	3300001450	Marine	MNTYQKTDNKIIRTYVINESIYKKFKDVAEKDMRKLSNIIQQSIVRYINSKS*
JGI24005J15628_102246171	3300001589	Marine	MNTYQKTDNKIIRTYVINESIYKKFKDVAEKDMRKLSNIIQQSXVRYINSKS*
GOS2266_10083721	3300001956	Marine	MFYQKINEPKIIRTYVVNKSIYEQFKTVAEKDMRKLSNIIEQAIIRYIRSKI*
Ga0066610_102400461	3300004276	Marine	TYVINESIYKKFKDVAEKDMRKLSNIIQQSIIRYINSKS*
Ga0066609_101561321	3300004278	Marine	MFYQKTNEPKIIRTYVVNKSIYEQFKTVAEKDMRKLSNIIEQAIIRYIRSKI*
Ga0066606_100466771	3300004280	Marine	MFYQKTNEPKIIRTYVVNKSIYQQFKTVAEKDMRKLSNIIEQAIIRYIRSKI*
Ga0066606_103499692	3300004280	Marine	IIRTYVINESIYKKFKDVAEKDMRKLSNIIQQSIVRYINSKS*
Ga0073579_10093193	3300005239	Marine	MNTYQKTDNKITRTYVINESIYKKFKDVAEKDMRKLSNIIQQSIVRYINSKS*
Ga0066858_100345812	3300005398	Marine	MNTYQKADNKIIRTYVINESIYKKFKDVAEKDMRKLSNIIQQSIIRYINSKS*
Ga0066858_100700192	3300005398	Marine	MSLLQKAEKKIIRTYVINESIYKQFKNVAEKDMRKLSNVIQQSIIRYIRSKV*
Ga0066858_101177572	3300005398	Marine	MSLAKSNDQKITRTYVVNKSVYKQFKEVAETDMRKLSNIIEQAIIRYIRSKI*
Ga0066860_102988011	3300005399	Marine	MSILQKAEKKIIRTYVINESIYKQFKNVAEKDMRKLSNVIQQSIIRYIRSKV*
Ga0066867_101188652	3300005400	Marine	MSLLQKAEKKIIRTYVINESIYKQFKDVAEKDMRKLSNVIQQSIIRYIRSKV*
Ga0066854_102031701	3300005431	Marine	MSLLQKAEKKIIRTYVINESIYKQFKNVAEKDMRKLSNIIQQSIIRYIRSKV*
Ga0066868_101587701	3300005508	Marine	MSLAKSNDQKITRTYVVNKSVYKQFKEVAETDMRKLSNIIEQAII
Ga0066827_101662422	3300005509	Marine	MSLLQKAEKKIIRTYVINESIYKQFKNVAEKDMRKLSNIIQQSIIRYIRSKA*
Ga0066853_102051702	3300005603	Marine	MFYQKTNEPKIIRTYVVKSIYEQFKTVAEKDMRKLSNIIEQAIIRYIRSK
Ga0066852_101727422	3300005604	Marine	MLSAKTDQKIIRTYVVNKSIYEQFKTVAEKDMRKLSNIIEQAIIRYIRSKI*
Ga0066850_102895011	3300005605	Marine	MFYQKINEPKIIRTYVVNKSIYQQFKTVAEKDMRKLSNIIEQAIIRYIRSKI*
Ga0075119_10325551	3300005931	Saline Lake	MNTYQKTDNKITRTYVINESIYKRFKDVAEKDMRKLSNIIQQSIVRYINSKS*
Ga0075441_100594301	3300006164	Marine	MNTYLKTDKSIIRTYVINEGIYKKFKDVAEKDMRKLSNIIQQSIVRYINSKS*
Ga0075443_101194691	3300006165	Marine	MNTYLKTDKSIVRTYVINEGIYKKFKDVAEKDMRKLSNIIQQSIIRYINSKS*
Ga0075446_100525382	3300006190	Marine	MNTYLKTDKSIVRTYVINEGIYKKFKDVAEKDMRKLSNIIQQSIVRYINSKS*
Ga0075446_101106362	3300006190	Marine	RTYVINESIYKRFKDVAEKDMRKLSNIIQQSIVRYINSKS*
Ga0075447_100983141	3300006191	Marine	RTYVINESIYKKFKDVAEKDMRKLSNIIQQSIVRYINSKS*
Ga0075447_103001582	3300006191	Marine	TYVINESIYKRFKDVAEKDMRKLSNIIQQSIVRYINSKS*
Ga0075445_100036887	3300006193	Marine	DNKITRTYVINESIYKRFKDVAEKDMRKLSNIIQQSIVRYINSKS*
Ga0075445_101535441	3300006193	Marine	MNTYQKSDNKITRTYVINESIYKRFKDVAEKDMRKLSNIIQQSIVR
Ga0098038_11582742	3300006735	Marine	MLSAKTDQKIIRTYVVNKSIYEQFKEVADKDMRKLSNIIEQAIIRYIRSKI*
Ga0098037_12865291	3300006737	Marine	TYQKTDNKITRTYVINESIYKKFKDVAEKDMRKLSNIIQQSIIRYINSKS*
Ga0066376_102158871	3300006900	Marine	KIIRTYVINESIYKQFKDVAEKDMRKLSNIIQQSIIRYIRSKV*
Ga0066372_103751642	3300006902	Marine	MQKKVKKLTRTYVISKSLYEKFKDVAEKDMRKMSNIIEQSIVRYINSKT*
Ga0115566_103988551	3300009071	Pelagic Marine	KNTMFYQKTNEPKIIRTYVVNKSIYQQFKTVAEKDMRKLSNIIEQAIIRYIRSKI*
Ga0114995_101566052	3300009172	Marine	MFHQKTNEPKIIRTYVVNKSIYEQFKTVAEKDMRKLSNIIEQAIIRYIRSKI*
Ga0114995_101598561	3300009172	Marine	IMNTYQKTDNKITRTYVINESIYKRFKDVAEKDMRKLSSIIQQSIVRYINSKS*
Ga0115551_11086692	3300009193	Pelagic Marine	MNTYQKTDNKITRTYVINESIYKRFKDVAEKDMRKLSNIIQQSMVRYINSKS*
Ga0114993_102776092	3300009409	Marine	MFHQKTNEPKIIRTYVVNKSIYEQFKIVAEKDMRKLSNIIEQSIIRYIRSKI*
Ga0114993_112505441	3300009409	Marine	MNTYQKTDNKITRTYVINESIYKKFKDVAKKDMRKLSNIIQQS
Ga0114994_101261151	3300009420	Marine	MNTYQKTDNKITRTYVINENIYKKFKDVAEKDMRKLSNIIQQSIVRYINSKS*
Ga0114994_102932471	3300009420	Marine	MFYQKTNEPKIIRTYVVNKSIYEQFKIVAEKDMRKLSNIIEQSIIRYIRSKI*
Ga0114994_103249052	3300009420	Marine	MNTYQKTDNKITRTYVINESIYKRFKDVAEKDMRKLSSIIQQSIVRYINSKS*
Ga0114994_104965771	3300009420	Marine	NESIYKKFKDVAEKDMRKLSNIIQQSIVRYINSKS*
Ga0114998_100410811	3300009422	Marine	INESIYKKFKDVAEKDMRKLSNIIQQSIVRYINSKS*
Ga0114998_100495901	3300009422	Marine	TDNKITRTYVINESIYKKFKDVAEKDMRKLSNIIQQSIVRYINSKS*
Ga0114998_101168432	3300009422	Marine	MFYQKTNEPKIIRTYVVNKSIYEQFKIVAEKDMRKLSNIIEQAIIRYIRSKI*
Ga0114998_101887021	3300009422	Marine	MNTYQKTDNKITRTYVINESIYKKFKDVAEKDMRKLSNIIQQSIVRYINSK
Ga0114998_103856402	3300009422	Marine	ETQNKEIEIMNTYQKTDNKITRTYVINESIYKRFKDVAEKDMRKLSNIIQQSIVRYINSKS*
Ga0114997_103577171	3300009425	Marine	MNTYQKTDNKITRTYVINESIYKKFKDVAEKDMRKLSNIIQQSIVRYIN
Ga0115558_11892251	3300009449	Pelagic Marine	TDNKITRTYVINESIYKRFKDVAEKDMRKLSNIIQQSIVRYINSKS*
Ga0115554_12017632	3300009472	Pelagic Marine	MNTYQKTDNKIIRTYVVNKSIYEQFKTVAEKDMRKLSNIIEQAIIRYIRSKI*
Ga0115569_103829371	3300009497	Pelagic Marine	ITRTYVINESIYKRFKDVAEKDMRKLSNIIQQSIVRYINSKS*
Ga0115003_102088071	3300009512	Marine	QNKEIEIMNTYQKTDNKITRTYVINESIYKRFKDVAEKDMRKLSSIIQQSIVRYINSKS*
Ga0115000_105270131	3300009705	Marine	TQEQKEQKIMNTYQKTDNKIIRTYVVNKSIYEQFKTVAEKDMRKLSNIIEQAIIRYIRSKI*
Ga0115000_109367261	3300009705	Marine	TYVINESIYKKFKDVAEKDMRKLSNIIQQSIVRYINSKS*
Ga0115001_100834941	3300009785	Marine	EIEIMNTYQKTDNKITRTYVINESIYKKFKDVAEKDMRKLSNIIQQSIVRYINSKS*
Ga0115001_105845741	3300009785	Marine	NTMFYQKTNEPKIIRTYVVNKSIYEQFKIVAEKDMRKLSNIIEQSIIRYIRSKI*
Ga0163179_110826182	3300012953	Seawater	MNQKKVKKLVRTYVISKSLYEKFKDVAEKDMRKMSNIIEQSIVRYINSKT*
Ga0180120_100438341	3300017697	Freshwater To Marine Saline Gradient	MTTYQKTDNKITRTYVINESIYKRFKDVAEKDMRKLSNIIQQSIVRYINSKS
Ga0181417_11529021	3300017730	Seawater	MNNLFKTEKSIVRTYVINEGIYKRFKDVAEKAMRKLSNIIQQSIVRYINSKS
Ga0181405_10807953	3300017750	Seawater	ITRTYVINESIYKKFKDVAEKDMRKLSNIIQQSIIRYINSKS
Ga0181420_12291261	3300017757	Seawater	DNKITRTYVINESIYKRFKDVAEKDMRKLSNIIQQSIVRYINSKS
Ga0181423_11937972	3300017781	Seawater	MMNNLFKTEKSIVRTYVINEGIYKRFKDVAEKDMRKLTNIIQQAIVRYINSKS
Ga0181380_11301491	3300017782	Seawater	MMNNLFKTEKSIVRTYVINEGIYKRFKDVAEKDMRKLSNIIQQSIVRYINSKS
Ga0181424_104367761	3300017786	Seawater	MTTYQKADNKITRTYVINESIYKKFKDVAEKDMRKLSNIIQQSIIRYINSKS
Ga0181565_105083782	3300017818	Salt Marsh	MLSAKTDQKIIRTYVVNKSIYEQFKEVANKDMRKLSNIIEQAIIRYIRSKI
Ga0181590_101940784	3300017967	Salt Marsh	IRTYVVNKSIYEQFKEVANKDMRKLSNIIEQAIIRYIRSKI
Ga0181562_106118201	3300019459	Salt Marsh	MLSAKTDQKIIRTYVVNKSIYEQFKEVANKDMRKLSNIIEQAII
Ga0211537_10167881	3300020262	Marine	MNTYQKADNKIIRTYVINESIYKKFKDVAEKDMRKLSNIIQQSIIRYINSKS
Ga0211537_10251022	3300020262	Marine	MSLAKSNDQKITRTYVVNKSVYKQFKEVAETDMRKLSNIIEQAIIRYIRSKI
Ga0211537_10310192	3300020262	Marine	MSLLQKAEKKIIRTYVINESIYKQFKNVAEKDMRKLSNVIQQSIIRYIRSKA
Ga0211566_11050222	3300020272	Marine	MSLLQKAEKKIIRTYVINESIYKQFKNVAEKDMRKLSNVIQQSIIRYIRSKV
Ga0211684_10273261	3300020304	Marine	MNTYLKTDKSIIRTYVINEGIYKKFKDVAEKDMRKLSNIIQQSIVRYINSKS
Ga0211677_100928951	3300020385	Marine	MNTYQKTDNKITRTYVINESIYKKFKDVAEKDMRKLSNIIQQSIIRYINSKS
Ga0211680_102568501	3300020389	Marine	MSILQKAEKKIIRTYVINESIYKQFKDVAEKDMRKLSNIIQQSIIRYI
Ga0211664_101341431	3300020455	Marine	MLSTKTDQKIIRTYVVNKSIYEQFKEVADKDMRKLSNIIEQAIIRYIRSKI
Ga0211547_101902732	3300020474	Marine	MNQKKVKKLVRTYVISKSLYEKFKDVAEKDMRKMSNIIEQSIVRYINSKT
Ga0211541_101749951	3300020475	Marine	YVINESIYKRFKDVAEKDMRKLSNIIQQSIVRYINSKS
Ga0206682_103242683	3300021185	Seawater	IRTYVVNKSIYQQFKTVAEKDMRKLSNIIEQAIIRYIRSKI
Ga0206123_104599672	3300021365	Seawater	MFYQKTNEPKIIRTYVVNKSIYEQFKTVAEKDMRKLSNIIEQAIIRYIRSKI
Ga0213863_104196151	3300021371	Seawater	QKIMNTYQKTDNKITRTYVINESIYKRFKDVAEKDMRKLSNIIQQSIVRYINSKS
Ga0213861_101118951	3300021378	Seawater	MNTYQKTDNKITRTYVINESIYKRFKDVAEKDMRKLSNIIQQSIVRYINSKS
Ga0222718_101009581	3300021958	Estuarine Water	NLNPQGVKNTMFYQKTNEPKIIRTYVVNKSIYGQFKTVAKKDMRKLSNIIEQAIIRYIRSKI
Ga0187833_102021671	3300022225	Seawater	MFYQKINEPKIIRTYVVNKSIYQQFKTVAEKDMRKLSNIIEQAIIRYIRSKI
Ga0222655_10122793	3300023245	Saline Water	MNTYQKSDNKITRTYVINESIYKKFKDVAEKDMRKLSNIIQQSIVRYINSKS
Ga0209634_12362071	3300025138	Marine	MNTYQKTDNKIIRTYVINESIYKKFKDVAEKDMRKLSNIIQQSIVRYINSKS
Ga0209775_12120592	3300025663	Marine	VVNKSIYQQFKTVAEKDMRKLSNIIEQAIIRYIRSKI
Ga0209667_11735783	3300025707	Marine	LNLNPQGVKNTMFYQKTNEPKIIRTYVVNKSIYQQFKTVAEKDMRKLSNIIEQAIIRYIRSKI
Ga0209362_10846422	3300025770	Marine	YVVNKSIYQQFKTVAEKDMRKLSNIIEQAIIRYIRSKI
Ga0209632_101636561	3300025886	Pelagic Marine	TYVVNKSIYQQFKTVAEKDMRKLSNIIEQAIIRYIRSKI
Ga0209335_101289671	3300025894	Pelagic Marine	EIEIMNTYQKTDNKITRTYVINESIYKRFKDVAEKDMRKLSNIIQQSIVRYINSKS
Ga0209335_101782471	3300025894	Pelagic Marine	TNEPKIIRTYVVNKSIYEQFKTVAEKDMRKLSNIIEQSIVRYIRSKS
Ga0208274_10871011	3300026188	Marine	QKITRTYVVNKSVYKQFKEVAETDMRKLSNIIEQAIIRYIRSKI
Ga0207986_10666901	3300026192	Marine	MSLLQKAEKKIIRTYVINESIYKQFKNVAEKDMRKLSNIIQQSIIRYIRSKA
Ga0207988_11205701	3300026206	Marine	MSLLQKAEKKIIRTYVINESIYKQFKNVAEKDMRKLSNVIQQSIIRYINSKS
Ga0208640_11197732	3300026208	Marine	MSLLQKAEKKIIRTYVINESIYKQFKNVAEKDMRKLSNVIQQSIIRYIRSKVXISRNLNN
Ga0208409_10706861	3300026212	Marine	MSLLQKAEKKIIRTYVINESIYKQFKNVAEKDMRKLSNIIQQSIIRYIRSK
Ga0208879_13486651	3300026253	Marine	MSLLQKAEKKIIRTYVINESIYKQFKDVAEKDMRKLSNIIQQSIIRYINSKS
Ga0208278_10418171	3300026267	Marine	MSLAKSNDQKITRTYVVNKSVYKQFKEVAETDMRKLSNIIEQAIIR
Ga0208411_10889694	3300026279	Marine	MSLLQKAEKKIIRTYVINESIYKQFKDVAEKDMRKLSNVIQQSIIRYIRSKV
Ga0209482_11149791	3300027668	Marine	MNTYQKSDNKITRTYVINESIYKRFKDVAEKDMRKLSNIIQQSIVRYINSKS
Ga0209383_10174394	3300027672	Marine	MNTYQKTDNKITRTYVINESIYKKFKDVAEKDMRKLSNIIQQSIVRYINSKS
Ga0209383_10664611	3300027672	Marine	MNTYQKSDNKITRTYVINESIYKRFKDVAEKDMRKLSNIIQQSIVRYI
Ga0209710_12287491	3300027687	Marine	MFYQKTNEPKIIRTYVVNKSIYEQFKIVAEKDMRKLSNIIEQSIIRYIR
Ga0209192_100781631	3300027752	Marine	MNTYQKTDNKITRTYVINESIYKKFKDVAEKDMRKLSNIIQQSIVR
Ga0209192_102575401	3300027752	Marine	MNTYQKTDNKITRTYVINESIYKRFKDVAEKDMRKLSSIIQQSIVRYINSKS
Ga0209709_102986351	3300027779	Marine	VINESIYKKFKDVAEKDMRKLSNIIQQSIVRYINSKS
Ga0209502_101526922	3300027780	Marine	MFYQKTNEPKIIRTYVVNKSIYEQFKIVAEKDMRKLSNIIEQSIIRYIRSKI
Ga0209502_104242332	3300027780	Marine	TRTYVINESIYKRFKDVAEKDMRKLSSIIQQSIVRYINSKS
Ga0209711_102128091	3300027788	Marine	EIKIMNTYQKTDNKIIRTYVINESIYKKFKDVAEKDMRKLSNIIQQSIVRYINSKS
Ga0209830_101280071	3300027791	Marine	MNTYQKTDNKITRTYVINESIYKKFKDVAEKDMRKLSNIIQQSIVRY
Ga0209091_101104984	3300027801	Marine	MNTYQKTDNKITRTYVINENIYKKFKDVAEKDMRKLSNIIQQSIVRYINSKS
Ga0209090_102252781	3300027813	Marine	INESIYKKFKDVAEKDMRKLSNIIQQSIVRYINSKS
Ga0209090_105414062	3300027813	Marine	IEIMNTYQKTDNKITRTYVINESIYKKFKDVAEKDMRKLSNIIQQSIVRYINSKS
Ga0257106_11460782	3300028194	Marine	MNTYQKPDNKIIRTYVINQSLYEQFKTVAEKDMRKLSNIIEQSIVRYIRSKS
Ga0257109_10488922	3300028487	Marine	MNTYQKADNKITRTYVINESIYKKFKDVAEKDMRKLSNIIQQSIIRYINSKS
Ga0308019_100945535	3300031598	Marine	EEETQNKEIEIMNTYLKTDKSIIRTYVINEGIYKKFKDVAEKDMRKLSNIIQQSIVRYINSKS
Ga0302121_102515291	3300031626	Marine	ETQNKEIEIMNTYQKTDNKITRTYVINESIYKKFKDVAEKDMRKLSNIIQQSIVRYINSK
Ga0308004_101793754	3300031630	Marine	QEEETQNKEIEIMNTYLKTDKSIVRTYVINEGIYKKFKDVAEKDMRKLSNIIQQSIIRYINSKS
Ga0307986_100963763	3300031659	Marine	YQKTDNKITRTYVINESIYKRFKDVAEKDMRKLSNIIQQSIVRYINSKS
Ga0307995_11495141	3300031696	Marine	MNTYQKTNNKITRTYVINESIYKKFKDVAEKDMRKLSNIIQQSIVRYINSKS
Ga0302130_10819881	3300031700	Marine	MFYQKTNEPKIIRTYVVNKSIYEQFKTVAEKDMRKLSNIIEQAIIRYIRSK
Ga0315315_112435821	3300032073	Seawater	MFYQKTNEPKIIRTYVVNKSIYQQFKTVAEKDMRKLSNIIEQAIIRYIRSKI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F069351

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences