NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F069308

Metagenome / Metatranscriptome Family F069308

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F069308
Family Type Metagenome / Metatranscriptome
Number of Sequences 124
Average Sequence Length 40 residues
Representative Sequence MAGNLVQGAVFTVMVVRAGMLRDPAFEHELAEQIRRSPRFF
Number of Associated Samples 105
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 60.48 %
% of genes near scaffold ends (potentially truncated) 96.77 %
% of genes from short scaffolds (< 2000 bps) 90.32 %
Associated GOLD sequencing projects 101
AlphaFold2 3D model prediction Yes
3D model pTM-score0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (73.387 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(41.935 % of family members)
Environment Ontology (ENVO) Unclassified
(41.935 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(47.581 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 44.93%    β-sheet: 0.00%    Coil/Unstructured: 55.07%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF13602ADH_zinc_N_2 19.35
PF00144Beta-lactamase 9.68
PF02567PhzC-PhzF 8.87
PF14437MafB19-deam 2.42
PF00378ECH_1 2.42
PF02538Hydantoinase_B 1.61
PF13302Acetyltransf_3 1.61
PF08240ADH_N 1.61
PF02774Semialdhyde_dhC 0.81
PF02416TatA_B_E 0.81
PF02738MoCoBD_1 0.81
PF01934HepT-like 0.81
PF13751DDE_Tnp_1_6 0.81
PF07589PEP-CTERM 0.81
PF00296Bac_luciferase 0.81
PF00004AAA 0.81
PF13207AAA_17 0.81
PF01138RNase_PH 0.81
PF11860Muramidase 0.81
PF00856SET 0.81
PF01979Amidohydro_1 0.81
PF06210DUF1003 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 9.68
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 9.68
COG2367Beta-lactamase class ADefense mechanisms [V] 9.68
COG0384Predicted epimerase YddE/YHI9, PhzF superfamilyGeneral function prediction only [R] 8.87
COG0146N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunitAmino acid transport and metabolism [E] 3.23
COG0002N-acetyl-gamma-glutamylphosphate reductaseAmino acid transport and metabolism [E] 0.81
COG0136Aspartate-semialdehyde dehydrogenaseAmino acid transport and metabolism [E] 0.81
COG0689Ribonuclease PHTranslation, ribosomal structure and biogenesis [J] 0.81
COG1185Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)Translation, ribosomal structure and biogenesis [J] 0.81
COG1826Twin-arginine protein secretion pathway components TatA and TatBIntracellular trafficking, secretion, and vesicular transport [U] 0.81
COG2123Exosome complex RNA-binding protein Rrp42, RNase PH superfamilyIntracellular trafficking, secretion, and vesicular transport [U] 0.81
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.81
COG2361HEPN domain protein, predicted toxin of MNT-HEPN systemDefense mechanisms [V] 0.81
COG2445Uncharacterized HEPN domain protein YutE, UPF0331/DUF86 familyGeneral function prediction only [R] 0.81
COG4420Uncharacterized membrane proteinFunction unknown [S] 0.81


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms73.39 %
UnclassifiedrootN/A26.61 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002568|C688J35102_119394408All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria687Open in IMG/M
3300003219|JGI26341J46601_10126215All Organisms → cellular organisms → Bacteria → Proteobacteria728Open in IMG/M
3300004092|Ga0062389_104109679All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium547Open in IMG/M
3300004114|Ga0062593_103547630All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088501Open in IMG/M
3300005181|Ga0066678_10201773All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00881270Open in IMG/M
3300005347|Ga0070668_100720611All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088881Open in IMG/M
3300005436|Ga0070713_100126599All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00882248Open in IMG/M
3300005535|Ga0070684_100486038All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1143Open in IMG/M
3300005540|Ga0066697_10691958All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088558Open in IMG/M
3300005576|Ga0066708_10617447All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088693Open in IMG/M
3300005764|Ga0066903_104563853All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088738Open in IMG/M
3300005764|Ga0066903_105040379All Organisms → cellular organisms → Bacteria → Proteobacteria700Open in IMG/M
3300005764|Ga0066903_106228617All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales623Open in IMG/M
3300005764|Ga0066903_107780180All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088551Open in IMG/M
3300005921|Ga0070766_10688637All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium691Open in IMG/M
3300006169|Ga0082029_1636313Not Available597Open in IMG/M
3300006176|Ga0070765_100636509All Organisms → cellular organisms → Bacteria1006Open in IMG/M
3300006796|Ga0066665_10375055Not Available1168Open in IMG/M
3300009137|Ga0066709_101627234Not Available922Open in IMG/M
3300009137|Ga0066709_103262397All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium591Open in IMG/M
3300010046|Ga0126384_11180127All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium705Open in IMG/M
3300010361|Ga0126378_10071399All Organisms → cellular organisms → Bacteria → Proteobacteria3327Open in IMG/M
3300010366|Ga0126379_12152740All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium659Open in IMG/M
3300010369|Ga0136643_10831321All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300010376|Ga0126381_100977374Not Available1221Open in IMG/M
3300010376|Ga0126381_102234046All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium787Open in IMG/M
3300010376|Ga0126381_105085514All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium504Open in IMG/M
3300010376|Ga0126381_105125992All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium502Open in IMG/M
3300011120|Ga0150983_11255326All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium507Open in IMG/M
3300012211|Ga0137377_11371204All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium636Open in IMG/M
3300012212|Ga0150985_100076458Not Available588Open in IMG/M
3300012924|Ga0137413_11565019All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium538Open in IMG/M
3300012927|Ga0137416_11305091Not Available656Open in IMG/M
3300012977|Ga0134087_10542975All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium592Open in IMG/M
3300013297|Ga0157378_12999206Not Available524Open in IMG/M
3300013503|Ga0120127_10172327Not Available526Open in IMG/M
3300015356|Ga0134073_10097147Not Available866Open in IMG/M
3300015373|Ga0132257_101748756All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium798Open in IMG/M
3300016270|Ga0182036_10324934All Organisms → cellular organisms → Bacteria1178Open in IMG/M
3300016270|Ga0182036_11363427All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium593Open in IMG/M
3300016319|Ga0182033_10042005All Organisms → cellular organisms → Bacteria3027Open in IMG/M
3300016319|Ga0182033_12077066All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300016341|Ga0182035_10394041Not Available1162Open in IMG/M
3300016404|Ga0182037_10353806All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1197Open in IMG/M
3300017973|Ga0187780_10881315Not Available649Open in IMG/M
3300017974|Ga0187777_11421129Not Available512Open in IMG/M
3300018001|Ga0187815_10231439All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium782Open in IMG/M
3300018029|Ga0187787_10225389Not Available673Open in IMG/M
3300018088|Ga0187771_10497574Not Available1031Open in IMG/M
3300018090|Ga0187770_10044114All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales3188Open in IMG/M
3300019889|Ga0193743_1158655All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300020579|Ga0210407_11180912All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium577Open in IMG/M
3300021171|Ga0210405_10489810All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium964Open in IMG/M
3300021181|Ga0210388_11401668Not Available587Open in IMG/M
3300021404|Ga0210389_10982209All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium655Open in IMG/M
3300021406|Ga0210386_10729892All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium853Open in IMG/M
3300021407|Ga0210383_10055800Not Available3294Open in IMG/M
3300021559|Ga0210409_10108954Not Available2550Open in IMG/M
3300021559|Ga0210409_10410398All Organisms → cellular organisms → Bacteria1211Open in IMG/M
3300022716|Ga0242673_1077382All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria607Open in IMG/M
3300022721|Ga0242666_1083460Not Available719Open in IMG/M
3300022756|Ga0222622_10445134Not Available919Open in IMG/M
3300025903|Ga0207680_10664718Not Available746Open in IMG/M
3300025905|Ga0207685_10382930Not Available717Open in IMG/M
3300026021|Ga0208140_1013131Not Available1196Open in IMG/M
3300026508|Ga0257161_1097493All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium612Open in IMG/M
3300026523|Ga0209808_1264422Not Available549Open in IMG/M
3300027824|Ga0209040_10532352All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium515Open in IMG/M
3300027908|Ga0209006_11031520All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium653Open in IMG/M
3300030706|Ga0310039_10304200Not Available603Open in IMG/M
3300031544|Ga0318534_10138776All Organisms → cellular organisms → Bacteria → Proteobacteria1401Open in IMG/M
3300031546|Ga0318538_10041636All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2207Open in IMG/M
3300031549|Ga0318571_10113465All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium901Open in IMG/M
3300031561|Ga0318528_10568470Not Available608Open in IMG/M
3300031564|Ga0318573_10666818All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium559Open in IMG/M
3300031572|Ga0318515_10098993All Organisms → cellular organisms → Bacteria → Proteobacteria1527Open in IMG/M
3300031572|Ga0318515_10466963All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium675Open in IMG/M
3300031668|Ga0318542_10110481All Organisms → cellular organisms → Bacteria1336Open in IMG/M
3300031680|Ga0318574_10085053All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1731Open in IMG/M
3300031681|Ga0318572_10611206All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300031681|Ga0318572_10834991All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium548Open in IMG/M
3300031719|Ga0306917_10029512All Organisms → cellular organisms → Bacteria → Proteobacteria3502Open in IMG/M
3300031719|Ga0306917_10342169All Organisms → cellular organisms → Bacteria → Proteobacteria1161Open in IMG/M
3300031736|Ga0318501_10063508All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1766Open in IMG/M
3300031744|Ga0306918_10320309Not Available1198Open in IMG/M
3300031747|Ga0318502_10106606All Organisms → cellular organisms → Bacteria → Proteobacteria1559Open in IMG/M
3300031748|Ga0318492_10256974All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium903Open in IMG/M
3300031751|Ga0318494_10566235Not Available664Open in IMG/M
3300031754|Ga0307475_10017475All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4953Open in IMG/M
3300031770|Ga0318521_10147757All Organisms → cellular organisms → Bacteria → Proteobacteria1333Open in IMG/M
3300031771|Ga0318546_10600417All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium774Open in IMG/M
3300031777|Ga0318543_10088231All Organisms → cellular organisms → Bacteria1321Open in IMG/M
3300031782|Ga0318552_10289944All Organisms → cellular organisms → Bacteria → Proteobacteria832Open in IMG/M
3300031782|Ga0318552_10531699All Organisms → cellular organisms → Bacteria → Proteobacteria600Open in IMG/M
3300031794|Ga0318503_10048820All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00881285Open in IMG/M
3300031796|Ga0318576_10184553Not Available979Open in IMG/M
3300031796|Ga0318576_10438650All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300031798|Ga0318523_10552039All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300031805|Ga0318497_10692883All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium571Open in IMG/M
3300031833|Ga0310917_11010302All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium557Open in IMG/M
3300031845|Ga0318511_10621463All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300031880|Ga0318544_10430586Not Available513Open in IMG/M
3300031893|Ga0318536_10210762All Organisms → cellular organisms → Bacteria988Open in IMG/M
3300031941|Ga0310912_11137596All Organisms → cellular organisms → Bacteria596Open in IMG/M
3300031945|Ga0310913_11080458All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300031947|Ga0310909_11044821All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium666Open in IMG/M
3300032025|Ga0318507_10169624All Organisms → cellular organisms → Bacteria → Proteobacteria937Open in IMG/M
3300032035|Ga0310911_10075296All Organisms → cellular organisms → Bacteria → Proteobacteria1809Open in IMG/M
3300032042|Ga0318545_10017000All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2277Open in IMG/M
3300032052|Ga0318506_10174174All Organisms → cellular organisms → Bacteria946Open in IMG/M
3300032076|Ga0306924_11388844All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium750Open in IMG/M
3300032090|Ga0318518_10432743All Organisms → cellular organisms → Bacteria → Proteobacteria674Open in IMG/M
3300032091|Ga0318577_10432426Not Available628Open in IMG/M
3300032091|Ga0318577_10534295All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium558Open in IMG/M
3300032094|Ga0318540_10074813All Organisms → cellular organisms → Bacteria → Proteobacteria1562Open in IMG/M
3300032094|Ga0318540_10600605All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium530Open in IMG/M
3300032205|Ga0307472_100317430All Organisms → cellular organisms → Bacteria1262Open in IMG/M
3300032261|Ga0306920_100267456All Organisms → cellular organisms → Bacteria → Proteobacteria2549Open in IMG/M
3300032892|Ga0335081_10204388All Organisms → cellular organisms → Bacteria2729Open in IMG/M
3300032898|Ga0335072_11660347Not Available535Open in IMG/M
3300033134|Ga0335073_11104840Not Available807Open in IMG/M
3300033158|Ga0335077_10785297All Organisms → cellular organisms → Bacteria971Open in IMG/M
3300033158|Ga0335077_10935214Not Available870Open in IMG/M
3300033158|Ga0335077_11088300All Organisms → cellular organisms → Bacteria791Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil41.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil8.87%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.65%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.03%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland4.03%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.23%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil2.42%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.42%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.61%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.61%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.61%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.61%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.61%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.61%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.81%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.81%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.81%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.81%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.81%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.81%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.81%
Termite GutHost-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.81%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003219Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010369Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 3)Host-AssociatedOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013503Permafrost microbial communities from Nunavut, Canada - A23_5cm_12MEnvironmentalOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300018001Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5EnvironmentalOpen in IMG/M
3300018029Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300019889Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022716Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022721Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026021Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_404 (SPAdes)EnvironmentalOpen in IMG/M
3300026508Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-AEnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300027824Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300030706Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031748Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031777Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031794Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23EnvironmentalOpen in IMG/M
3300031796Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24EnvironmentalOpen in IMG/M
3300031798Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19EnvironmentalOpen in IMG/M
3300031805Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031880Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300032025Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032042Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032090Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22EnvironmentalOpen in IMG/M
3300032091Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25EnvironmentalOpen in IMG/M
3300032094Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J35102_11939440813300002568SoilMAGNLVQGALFTVMVVRAGMLRDPEFQDELAQQIERSPRF
JGI26341J46601_1012621523300003219Bog Forest SoilMAGNLVQGAVFTVMVVRAGMLRDAAFEPELAEQIRRSPRFFLNA
Ga0062389_10410967913300004092Bog Forest SoilMAGNLVQGAVFTVMVVRAGLLRDAAFEQDLAEQIRRSPRFF
Ga0062593_10354763023300004114SoilMAAGSLVQGALFTVMVVRAGMLRDPAFAHELGQQVERSPRFFQN
Ga0066678_1020177313300005181SoilMAGNLVQGALFTVMVIRAGMLRDAVFEQELTEQIERSPRFF
Ga0070668_10072061123300005347Switchgrass RhizosphereMAAGTLVQGALFTVMVVRAGMLRDPEFGRELAVQVERSPRFF
Ga0070713_10012659913300005436Corn, Switchgrass And Miscanthus RhizosphereMAGNLVQGALFTVMVVRAGILRDAAFGLELEQQVGRSPRFFL
Ga0070684_10048603813300005535Corn RhizosphereMAAGTIQGALFTVMVVRAVPLSDPAFEHELARQIERSPRF
Ga0066697_1069195823300005540SoilMASNLVQGALFTVMVVRAGLLRDAAFDRELEQQVERS
Ga0066708_1061744713300005576SoilMAAGNLVQGALFTVIVVRAGLLRDAEFARELAQQVERSPRFFRNA
Ga0066903_10456385323300005764Tropical Forest SoilVAAGNLLQGALFTVMVVRAGMLRDPAFAPQLATQVERSPR
Ga0066903_10504037913300005764Tropical Forest SoilMAGNLVQGAVFTVMVVRAGMLRDPAFEHELAEQILRSP
Ga0066903_10622861713300005764Tropical Forest SoilMAGNLVQGALFTVMVVRAGMLRDPGFEFELAGQVQRSPRFF
Ga0066903_10778018013300005764Tropical Forest SoilMAAGNLVQGALFTVIVVRAAMLHDSAFAADLAQQIERSPRFFRDAPV
Ga0070766_1068863723300005921SoilMAAGNLVQGALFTVMVVRAAMLREPGFADELAQQIK
Ga0082029_163631313300006169Termite NestMAAGTLVQGALFTVMVVRAGMLRDPEFGRELAVQVE
Ga0070765_10063650933300006176SoilMAGSLVQGAIFTVMVVRAAMLRDPAFAEELAKQVERSPRFFLNAP
Ga0066665_1037505523300006796SoilMPGNLVQGAVFTVMVVRAEMLRDPAFEPELAEQVRRS
Ga0066709_10162723413300009137Grasslands SoilMAGNLVQGALFTVMVIRAGMLRDAVFEQELTEQIERSPRF
Ga0066709_10326239713300009137Grasslands SoilMAGNLVQGAVFTVMVVRAGMLRDSDFEAELAEQVRRSPRFFHNAP
Ga0126384_1118012733300010046Tropical Forest SoilMAANLVQGAVFTVMVVRAGTLRDPGFEFELAGQVQ
Ga0126378_1007139913300010361Tropical Forest SoilMAGNLVQGAVFTVMVVRAGMLRDPAFEHELAEQIRLS
Ga0126379_1215274013300010366Tropical Forest SoilMAAGNLVQGALFTVMVVRAGLLRDPDFEEELARQIERS
Ga0136643_1083132123300010369Termite GutMAGNLVQGAVFTVMVVRAELLRDPGFEFELAGQIQR
Ga0126381_10097737413300010376Tropical Forest SoilMAGNLVQGAVFTVMVVRAGLLRDPGFDAELAKQVQRSPR
Ga0126381_10223404633300010376Tropical Forest SoilMAGNLVQGAVFTVMVVRAGMLRDPGFEFELAGQVQRSPRFF
Ga0126381_10508551413300010376Tropical Forest SoilMAGNLVQGAVFTVMVVRAGMLRDPGFEFELAGQVQRS
Ga0126381_10512599223300010376Tropical Forest SoilMAANLVQGAVFTVMVVRAGMLRDPGFEFELAGQVQRSPRFFLN
Ga0150983_1125532623300011120Forest SoilMAGNLVQGAVFTVMVVRAGMLRDHGFEAELAEQVRRSPRFFHNA
Ga0137377_1137120413300012211Vadose Zone SoilMAGNLVQGAVFTVMVVRAGMLRDPAFELELAEQVRRSPRFF
Ga0150985_10007645813300012212Avena Fatua RhizosphereMATGTLVQGALFTVMVVRAGMLRDPEFGRELALQVERS
Ga0137413_1156501923300012924Vadose Zone SoilMAGNLVQGAVFTVMVVRAGMLRDPGFEAELAEQVQRSPRFFLN
Ga0137416_1130509113300012927Vadose Zone SoilMAAGNLVQGALFTVMVVRAGMLRDPAFAYELAQQVERSP
Ga0134087_1054297513300012977Grasslands SoilMAGNLVQGAVFTVMVVRAGMLRDPGFEAELAEQVRRRPP*
Ga0157378_1299920613300013297Miscanthus RhizosphereMAAGTLVQGALFTVMVVRAGMLRDPEFGRELAVQVERSPRFFRNAPV
Ga0120127_1017232713300013503PermafrostMAAGNLVQGALFTVMVVRAAMLRDPAFAHELAQQVE
Ga0134073_1009714723300015356Grasslands SoilMAGNLVQGAVFTVMVVRASMLRDPEFQDELSRQIDRSP
Ga0132257_10174875613300015373Arabidopsis RhizosphereMAGNLVQGAVFTVMVVRAGMLRDPAFESELAPQIERSPRFFLTAPVVLDLRGAAEFVRDE
Ga0182036_1032493413300016270SoilMAVSLVQGAVFTVMVVRAGMLRDPAFEAELARQIE
Ga0182036_1136342713300016270SoilMAGNLVQGALFTVMVVRAGMLRDPVFELELAQRVQRSPRFF
Ga0182033_1004200513300016319SoilMAGNLVQGAVFTVMVVRAGMLRDPAFEQELAEQIRL
Ga0182033_1207706613300016319SoilMAGNLVQGAVFTVMVVRAGLLRDPAFEPELARQVQRSPRF
Ga0182035_1039404113300016341SoilMAGNLVQGAVFTVMVVRAGMLRDPAFEQELAEQIRLS
Ga0182037_1035380613300016404SoilMVGNLVQGAVFTVMVVRAGMLRDPVFETELAEQIR
Ga0187780_1088131523300017973Tropical PeatlandMAAGNLVQGALFTVMVVRAAMLRDPAFEHELAQQIGRSPRFF
Ga0187777_1142112913300017974Tropical PeatlandMAAGNLVQGALFTVMVVRAAMLRNPAFTQELTQQIGRSPR
Ga0187815_1023143913300018001Freshwater SedimentMAGSLVQGAVFTVMVVRAGMLRDPIFEAELAEQISRSPRFFLN
Ga0187787_1022538913300018029Tropical PeatlandMAAGNIVQGALFTVMVVRAAMLRDPAFESELARQIARSPR
Ga0187771_1049757413300018088Tropical PeatlandMAAGNIVQGALFTVMVVRAAMLRDPAFETELAQQI
Ga0187770_1004411413300018090Tropical PeatlandMAAGNIVQGALFTVMVVRAAMLRDPAFETELAQQIGRSPRFFQNA
Ga0193743_115865513300019889SoilMAAGNLVQGALFTVMVVRAGMLGDPAFAHELGLQVERS
Ga0210407_1118091213300020579SoilMAGNLVQGAVFTVMVVRAEMLRDPAFDPELAQQVQ
Ga0210405_1048981033300021171SoilMAGNLVQGAVFTVMVVRAEMLRDPAFEAELAVQVQRSPRFFHNAP
Ga0210388_1140166823300021181SoilMAAGNIVQGALFTVMVVRAAMLRDSTFETELGQQIERSPRF
Ga0210389_1098220933300021404SoilMAGNLVQGAVFTVMVVRAGMLRDPGFEAELAEKVRRSP
Ga0210386_1072989213300021406SoilMAGNLVQGAVFTVMVVRAGLLRDPTFEAELAEQIRRSPRFFLNAPV
Ga0210383_1005580013300021407SoilMAGNLVQGAVFTVMVVRAGMLRDPGFETELAEQVQRS
Ga0210409_1010895453300021559SoilMAGNLVQGAVFTVMVVRAGMLRDPGFEAELAEQVRR
Ga0210409_1041039833300021559SoilMAGNLVQGAVFTVMVVRAGMLRDPGFEAELAEQVH
Ga0242673_107738223300022716SoilMAGNLVQGAVFTVMVVRAGLLRDPAFEAELAEQISRSPRFFF
Ga0242666_108346013300022721SoilMAGNLVQGAVFTVMVVRAGLLRDPAFEAELAEQISRSPRFF
Ga0222622_1044513413300022756Groundwater SedimentMAGNLVQGALFTVMVVRAGMLRDAAFEEELHQQVGRSPRFFL
Ga0207680_1066471823300025903Switchgrass RhizosphereMAAGSLVQGALFTVMVVRAGMLRDPAFAYELGQQVERSPRF
Ga0207685_1038293013300025905Corn, Switchgrass And Miscanthus RhizosphereMAGNLVQGALFTVMVVRAGMLRDTAFEEELQQQVGR
Ga0208140_101313113300026021Rice Paddy SoilMAAGNLVQGALFTVMVVRAGLLHDAAFARELAQQV
Ga0257161_109749313300026508SoilMVGNLVQGAVFTVMVVRAEMLRDPAFDPELAQQVQRSPRFFLN
Ga0209808_126442213300026523SoilMASNLVQGALFTVMVVRAGLLRDAAFDRELEQQVERSPRFF
Ga0209040_1053235213300027824Bog Forest SoilMAGSLVQGAVFTVMVVRAEMLRDPAFEAELAEQIRRSPRFFLNAPV
Ga0209006_1103152023300027908Forest SoilMAGNLVQGAVFTVMVVRAGMLRDPGFEAELAEQVHRSPRFFHNAPV
Ga0310039_1030420013300030706Peatlands SoilMAAGNLVQGALFTVMVVRAAMLRDSDFEHELAQQI
Ga0318534_1013877613300031544SoilMAGSLVQGAVFTVMVVRAGMLRDPGFEFELAGQVQRSPRFFLNAPVVLD
Ga0318538_1004163663300031546SoilMAGNLVQGAVFTVMVVRAGMLRDPAFEPELAEQIRRSPRFFLNAP
Ga0318571_1011346513300031549SoilMAGNLVQGAVFTVMVVRAGMLRDPAFEPELAEQIR
Ga0318528_1056847013300031561SoilMTGNLVQGAVFTVMVVRAGMLRDPAFEHELAEQIQRSPRFFLN
Ga0318573_1066681823300031564SoilMAGNLVQGAVFTVMVVRAGMLRDPSFEFELAQQVQRSPRFFLNAPVVL
Ga0318515_1009899313300031572SoilMVGNLVQGAVFTVMVVRAGMLRDPVFETELAEQIRLSPRFFLN
Ga0318515_1046696323300031572SoilMAGNLVQGAVFTVMVVRAENLREPAFEPELAQQVQRSPR
Ga0318542_1011048143300031668SoilMAGNLVQGAVFTVMVVRAGMLRDPSFEFELAQQVQRSPRFFLNAPV
Ga0318574_1008505313300031680SoilMAGNLVQGAVFTVMVVRAGMLRDPAFESELADQAQ
Ga0318572_1061120623300031681SoilMAGNLVQGAVFTVMVVRAGMLRDPAFEHELAEQIRLSPRFFLNAPV
Ga0318572_1083499113300031681SoilMAGNLVQGAVFTVMVVRAGLLRDPTFEQNLAEQIQRSPRF
Ga0306917_1002951213300031719SoilMAASLVQGAVFTVMVVRAGMLRDPAFEAELARQIERSP
Ga0306917_1034216933300031719SoilMAGNLVQGALFTVMVVRAGMLRDPVFELELAQQVQRSPRFFLNA
Ga0318501_1006350813300031736SoilMAGNLVQGAVFTVMVVRAGMLRDPAFEPELAEQIRRSPR
Ga0306918_1032030923300031744SoilMAGNLVQGAVFTVMVVRAGMLRDPAFEHELAEQILRSPR
Ga0318502_1010660613300031747SoilMAGNLVQGAVFTVMVVRAGMLRDPAFEPELAEQIRRSPRFFLNAPVV
Ga0318492_1025697423300031748SoilMAGNLVQGAVFTVMVVRAGMLRDPAFEPELAEQIRRSP
Ga0318494_1056623523300031751SoilMAGNLVQGAVFTVMVVRAGMLRDPAFEHELAEQIRL
Ga0307475_1001747513300031754Hardwood Forest SoilMAGNLVQGAVFTVMVVRAEMLRDPAFEAELAVQVQR
Ga0318521_1014775723300031770SoilMAGNLVQGAVFTVIVVRAGMLRDPAFEFELAEQIRRSPRFFLNAPVV
Ga0318546_1060041723300031771SoilMAGNLVQGALFTVMVVGAGGLRDPAFEFQLGEQVRRSPR
Ga0318543_1008823143300031777SoilMAGNLVQGAVFTVMVVRAGMLRDPAFEHELAEQIRLSPRF
Ga0318552_1028994423300031782SoilMAGNLVQGAVFTVMVVRAGMLRDPDFDSQLAEQVRRSPRFFLNAPV
Ga0318552_1053169923300031782SoilMAGNLVQGAVFTVMVVRAGMLRDPAFEPELAEQIRRSPRFFLNAPV
Ga0318503_1004882013300031794SoilMAGNLVQGAVFTVMVVRAGMLRDPAFESELAEQIRRSPRFFLNAPVV
Ga0318576_1018455313300031796SoilMAGNLVQGAVFTVMVVRAGMLRDPAFEPELAEQIRR
Ga0318576_1043865023300031796SoilMAGNLVQGAVFTVMVVRAGMLRDPAFEHELAEQIR
Ga0318523_1055203913300031798SoilMAGNLVQGAVFTVMVVRAGMLRDPAFEHELAEQIRRSPRFFLNAPVVL
Ga0318497_1069288313300031805SoilMAGNLVQGAVFTVMVVRAGMLRDPAFEPELAEQIRRSPRFFLNA
Ga0310917_1101030213300031833SoilMAGNLVQGAVFTVMVVRAGLLRDPAFEPELARQVQRSP
Ga0318511_1062146323300031845SoilMAGNLVQGAVFTVMVVRAGMLRDPAFESELAEQIRRSPRFFLNAPVVL
Ga0318544_1043058623300031880SoilMAGNLVQGAVFTVMVVRAGMLRDPAFEHELAEQIQR
Ga0318536_1021076213300031893SoilMAGNLVQGAVFTVMVVRAENLREPTFEPELAQQVRR
Ga0310912_1113759613300031941SoilMAGNLVQGAVFTVMVVRAGMLRDPAFEHELAEQIRRSPR
Ga0310913_1108045813300031945SoilMAAGNIVQGALFTVMVVRATMLRDPAFENELAQQIGRSPR
Ga0310909_1104482123300031947SoilMAGNLVQGAVFTVMVVRAGLLRDPTFEQNLAEQIQRSPRFFLN
Ga0318507_1016962423300032025SoilMAGNLVQGAVFTVMVVRAGMLRDPDFDSQLAEQVRRSPRFFLNAPDCPPSENRHR
Ga0310911_1007529633300032035SoilMAGNLVQGAVFTVMVVRAGMLRDPVFETELAEQIRLSPRFFLNAPVVLD
Ga0318545_1001700013300032042SoilMAGNLVQGAVFTVMVVRAGMLRDPAFEPELAEQIRRS
Ga0318506_1017417423300032052SoilMAGNLVQGAVFTVMVVRAGMLRDPDFDSQLAEQVRRSPRFFLN
Ga0306924_1138884433300032076SoilMAGNLVQGAVFTVMVVRAGMLRDPGFEAELAEQVQ
Ga0318518_1043274323300032090SoilMAGNLVQGAVFTVMVVRAGMLRDPAFEHELAEQILRSPRFFLNAPV
Ga0318577_1043242623300032091SoilMAGNLVQGAVFTVMVVRAGMLRDPVFETELAEQIRLSPRFFLN
Ga0318577_1053429523300032091SoilMAGNLVQGAVFTVMVVRAGMLRDPSFEFELAQQVQRSPRFFLN
Ga0318540_1007481333300032094SoilMAGNLVQGAVFTVMVVRAGMLRDPAFEHELAEQIRLSPRWCST
Ga0318540_1060060513300032094SoilMAGNLVQGALFTVMVVRAGMLRDPVFELELAQQVQR
Ga0307472_10031743033300032205Hardwood Forest SoilMAGNLVQGAVFTVMVVRAGMLRDPAFEQELAEQIQRSP
Ga0306920_10026745643300032261SoilMAGNLVQGAVFTVMVVRAGMLRDPAFEHELAEQIRRSPRFF
Ga0335081_1020438843300032892SoilMAAGNLVQGALFTVMVVRATMLRDPEFEHELARQIGRSPRFFQ
Ga0335072_1166034723300032898SoilMAAGNLVQGALFTVMVVRAAALREPAFEAELGQQIGRSPRF
Ga0335073_1110484013300033134SoilMASNLVQGAVFTVMVVRAGMLRDPVFEAQLAEQIGRSPRF
Ga0335077_1078529713300033158SoilMAAGNLVQGALFTVMVVRATMLRDPEFEHELARQIGRSP
Ga0335077_1093521423300033158SoilMATGTLVQGALFTVMVVRAGMLRDPSFEHELARQVERSPRFFR
Ga0335077_1108830023300033158SoilMAGGLVQGALFTVMVVRAAMLRDAAFAYELAQQVERSPRFFLHAP


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.